View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1358_high_91 (Length: 317)
Name: NF1358_high_91
Description: NF1358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1358_high_91 |
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Alignment Details
Target: chr3 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 18 - 288
Target Start/End: Original strand, 40749066 - 40749336
Alignment:
| Q |
18 |
tacctcattttgtattttattgacatatgtccaaactgacagttatgaggtcattgtttgattccagtgactattttacgtcaggatatacttttatttg |
117 |
Q |
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| T |
40749066 |
tacctcattttgtattttattgacatttgtccaaactgacagttatgagatcattgtttgattctagtgactattttacgccagaatatacttttatttg |
40749165 |
T |
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| Q |
118 |
ggtttagaatagaatcacgtgtataagtagtagttgaaagtcgccataaattgatccttcactgaagcatgaattatttacatgtgtatatattaaaatt |
217 |
Q |
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| T |
40749166 |
ggtttagaatagaatcacgcgtataagtagtagttgaaagtcgccataaattgatccttcactcaagcatgaattatttacatgtgtatatattaaaatt |
40749265 |
T |
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| Q |
218 |
aagagaaaataaaacgtgaaatgccatctataaaattgttctacaaacaatattcatttgcatatcatgtt |
288 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40749266 |
aagagaaaataaaacgtgaaatgccatctataaaattgttctacaaacaatattcatttgcatatcatgtt |
40749336 |
T |
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