View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1358_low_108 (Length: 309)
Name: NF1358_low_108
Description: NF1358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1358_low_108 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 41 - 301
Target Start/End: Complemental strand, 13624813 - 13624553
Alignment:
| Q |
41 |
atagaaaattttagatccaccattttatgtaatgtgtcatacaagacagttacaacaaaattcttgctaataaattaagtctactttggttaatccatac |
140 |
Q |
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| T |
13624813 |
atagaaaattttagatccaccattttatgtaatgtgtcatacaagacagttacaacaaaattcttgctaataaattaagtctactttggttaatccatgc |
13624714 |
T |
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| Q |
141 |
caaagcaactaagtctctaaacgacaaagtagtgacgatatcagtgcagtgcaggacctctatttagatgaaaataaaagttgtaacgagtggatgatta |
240 |
Q |
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| T |
13624713 |
caaagcaactaagtctctaaacgacaaagtagtgacgatatcagtgcagtgcatgacctctatttagatgaaaataaaagttgtaacgagtggatgatta |
13624614 |
T |
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| Q |
241 |
ttggatacaatggaatacaaatttgtcaattgattgatgatgttgctccttggttcatctc |
301 |
Q |
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| T |
13624613 |
ttggatacaatggaatacaaatttgtcaattgattgatgatgttgctccttggttcttctc |
13624553 |
T |
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