View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1358_low_11 (Length: 629)
Name: NF1358_low_11
Description: NF1358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1358_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 504; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 504; E-Value: 0
Query Start/End: Original strand, 28 - 621
Target Start/End: Original strand, 36917382 - 36917977
Alignment:
| Q |
28 |
cagtatggagttctctgcaacattttgatatcactgcaacctccacttataagtg--atggataatataaatctctgtccaacgtgtggcttcagtagta |
125 |
Q |
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| T |
36917382 |
cagtatggagttctctgcaacattttgatatcactgcaacctccacttctaagtgtgatggataatataaatctctgtccaatgtgtggcttcagtagta |
36917481 |
T |
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| Q |
126 |
cataattacacaatttcattccaaattgcaagtgtgaatcttaattgtttgtattctctccagttgtgagttctagaagctgcaaatttcagcctcaaca |
225 |
Q |
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| T |
36917482 |
cataattacacaatttcattccaaattgcaagtgtgaatcttaattgtttgtattctctccagttgtgagttctagaagctgcaaatttcagccttaaca |
36917581 |
T |
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| Q |
226 |
cgataatatcaaacaacccannnnnnnaactattaaattgaactaaatttaaaatatactacctcactgtaagggtcgttcgatctttttcaactggaaa |
325 |
Q |
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| T |
36917582 |
cgataaaatcaaacaacccatttttttaactattaaattgaactgaatttaaaatatactacctcactgtaagggtctttcgatcattttcaactggcaa |
36917681 |
T |
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| Q |
326 |
aatttgaatctaaaatgattgcagagtttagtgctacagaggatttgtgtctgtattcttttaaaatcacattgaggagaaaattgagtcatgttaattt |
425 |
Q |
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| T |
36917682 |
aatttgaatctaaaatgattgcagagtttagtgctacagaggatttgtgtctgtattcttttaaaatcacattgaggagaaaattgagtcatgttaattt |
36917781 |
T |
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| Q |
426 |
tgatagcctataatccaatgaacctgcttatatcgcttgcaataattaaaatatacagtttctcaaaaccaaaaccacttggacagtaatctccaatgca |
525 |
Q |
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| T |
36917782 |
tgatagcctataacccaatgaacctggttatatcgcttgcaataattaaaacatacagtttctcaaaaccaaaaccacttggacagtaatctccaatgta |
36917881 |
T |
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| Q |
526 |
actagggtcagaagcacatacatacagtgaagattgcgtacctacccagcattcttgagtcatgtcaaaaatttgcaatcagcaattacctatgat |
621 |
Q |
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||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
36917882 |
actagggtcagaagcacctacatacagtgaagatcgcgtacctacccagcattcttgagtcacgtcaaaaatttgcaatcagcaattacctatgat |
36917977 |
T |
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