View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1358_low_110 (Length: 307)
Name: NF1358_low_110
Description: NF1358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1358_low_110 |
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Alignment Details
Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 27011266 - 27011419
Alignment:
| Q |
83 |
gtatatacattgttacacaattcacaaatattgacaatacgaaacttcaatttaactacaaaatctacctcacgtctaacgtgcgtctggattcaatttt |
182 |
Q |
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| T |
27011266 |
gtatatacattgttacacaattcacaaatattgacaatatgaaaattcaatttaactacaaaatctacc-cacgtctaacgtgcgtctggattcaatttt |
27011364 |
T |
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| Q |
183 |
catatgatctccataatttgactctaatactattttaaaatgcacttgaacctca |
237 |
Q |
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| T |
27011365 |
catatgatctgcataatttgactctaataccattttaaaatgcacttaaacctca |
27011419 |
T |
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