View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1358_low_125 (Length: 279)
Name: NF1358_low_125
Description: NF1358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1358_low_125 |
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Alignment Details
Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 21 - 270
Target Start/End: Complemental strand, 37317042 - 37316788
Alignment:
| Q |
21 |
cggaggttctgataatatgacaccgtgttaattattttttgacaaagattattgtggtgataactttatacaataaatatttaattatataaagtgtgta |
120 |
Q |
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| T |
37317042 |
cggaggttctgataatatgacaccgtgttaattattttttgacaaagattattgtggtgataacattataaaataaatatttaattatataaagtgtgta |
37316943 |
T |
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| Q |
121 |
ctttagtgtttacaaattgaagcaataacacaaggtaaaaacttcccagctgcaatagatgatttatgtacaaagtacaaaccttttgtt-----gtatg |
215 |
Q |
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| T |
37316942 |
cattagtgtttacaaattgaagcaataacacaaggtaaaaacttcccagctgcaatagatgatttatgtacaaagtacaaaccttttgttgtattgtatg |
37316843 |
T |
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| Q |
216 |
cttctaaaagttaagaaacattactcaattaggcaatgagaaccttcatctcact |
270 |
Q |
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| T |
37316842 |
cttctaaaagttaagaaacattactcaattaggcaatgagaaccttcatctcact |
37316788 |
T |
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