View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1358_low_13 (Length: 613)

Name: NF1358_low_13
Description: NF1358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1358_low_13
NF1358_low_13
[»] chr3 (23 HSPs)
chr3 (13-585)||(47761000-47761570)
chr3 (399-524)||(24758896-24759021)
chr3 (399-524)||(24767893-24768018)
chr3 (399-524)||(24813120-24813245)
chr3 (399-524)||(24826993-24827118)
chr3 (399-519)||(37984844-37984964)
chr3 (408-519)||(53024811-53024921)
chr3 (399-519)||(31687629-31687750)
chr3 (399-524)||(33648255-33648380)
chr3 (266-353)||(13867399-13867487)
chr3 (399-519)||(17689428-17689548)
chr3 (399-517)||(19769654-19769772)
chr3 (373-499)||(32790915-32791041)
chr3 (273-355)||(52134598-52134681)
chr3 (264-345)||(3848147-3848229)
chr3 (442-519)||(24129220-24129297)
chr3 (266-321)||(11396747-11396803)
chr3 (399-480)||(12531306-12531388)
chr3 (402-499)||(11396607-11396704)
chr3 (399-452)||(50835520-50835573)
chr3 (399-452)||(50840280-50840333)
chr3 (294-342)||(12531396-12531444)
chr3 (271-321)||(28907579-28907630)
[»] chr7 (13 HSPs)
chr7 (264-467)||(11646703-11646907)
chr7 (264-467)||(13764791-13764995)
chr7 (399-519)||(26906675-26906795)
chr7 (399-519)||(43070290-43070410)
chr7 (271-353)||(7448981-7449064)
chr7 (399-519)||(14231971-14232092)
chr7 (272-480)||(44548370-44548578)
chr7 (423-519)||(48847147-48847243)
chr7 (424-519)||(1264695-1264790)
chr7 (273-355)||(6841381-6841464)
chr7 (265-313)||(39704319-39704368)
chr7 (266-329)||(39445824-39445888)
chr7 (332-440)||(35858425-35858532)
[»] chr4 (6 HSPs)
chr4 (385-519)||(24262549-24262683)
chr4 (399-519)||(29861375-29861495)
chr4 (266-323)||(41813488-41813546)
chr4 (373-491)||(17404837-17404955)
chr4 (272-362)||(21207392-21207483)
chr4 (264-321)||(17404766-17404824)
[»] chr6 (14 HSPs)
chr6 (282-439)||(10095337-10095495)
chr6 (272-467)||(27447068-27447264)
chr6 (399-519)||(21999272-21999392)
chr6 (265-348)||(19121424-19121508)
chr6 (399-519)||(31891390-31891510)
chr6 (265-355)||(30906235-30906326)
chr6 (399-499)||(22681779-22681879)
chr6 (265-327)||(8976996-8977059)
chr6 (266-328)||(33051359-33051422)
chr6 (264-360)||(233827-233924)
chr6 (273-325)||(2918380-2918433)
chr6 (265-329)||(3066429-3066494)
chr6 (271-329)||(33481843-33481903)
chr6 (266-321)||(4659056-4659112)
[»] chr2 (13 HSPs)
chr2 (266-457)||(2040163-2040351)
chr2 (399-519)||(23347888-23348008)
chr2 (399-519)||(18354215-18354335)
chr2 (399-519)||(12742735-12742855)
chr2 (431-519)||(30015554-30015642)
chr2 (365-494)||(30044966-30045098)
chr2 (365-494)||(30050129-30050261)
chr2 (365-494)||(30141173-30141305)
chr2 (431-519)||(30074651-30074739)
chr2 (304-416)||(30242783-30242895)
chr2 (272-362)||(1613194-1613285)
chr2 (402-499)||(9211537-9211634)
chr2 (274-329)||(925055-925111)
[»] scaffold0003 (2 HSPs)
scaffold0003 (272-467)||(40094-40290)
scaffold0003 (266-467)||(33478-33662)
[»] chr5 (11 HSPs)
chr5 (401-519)||(9044896-9045014)
chr5 (399-519)||(7472416-7472536)
chr5 (399-519)||(30442804-30442924)
chr5 (399-519)||(32871951-32872071)
chr5 (402-519)||(22002963-22003080)
chr5 (399-519)||(30441504-30441623)
chr5 (273-378)||(22004578-22004684)
chr5 (294-355)||(19081384-19081445)
chr5 (272-362)||(4734874-4734965)
chr5 (272-362)||(26836407-26836498)
chr5 (271-329)||(29656066-29656125)
[»] chr8 (15 HSPs)
chr8 (399-516)||(8163895-8164012)
chr8 (399-519)||(14672481-14672601)
chr8 (266-448)||(1848721-1848904)
chr8 (433-519)||(33686215-33686301)
chr8 (266-361)||(1849846-1849942)
chr8 (266-361)||(27671415-27671511)
chr8 (271-342)||(33199052-33199125)
chr8 (399-452)||(11730390-11730443)
chr8 (399-452)||(23740702-23740755)
chr8 (294-342)||(27535501-27535549)
chr8 (271-323)||(15610346-15610399)
chr8 (265-361)||(34345916-34346013)
chr8 (399-466)||(27535408-27535476)
chr8 (271-329)||(9374612-9374671)
chr8 (307-361)||(40398821-40398875)
[»] scaffold0045 (1 HSPs)
scaffold0045 (399-519)||(10222-10342)
[»] scaffold0035 (1 HSPs)
scaffold0035 (399-519)||(37044-37164)
[»] chr1 (8 HSPs)
chr1 (399-519)||(25226742-25226862)
chr1 (373-499)||(32437561-32437687)
chr1 (266-355)||(23597858-23597948)
chr1 (265-323)||(7604858-7604917)
chr1 (266-329)||(42773298-42773362)
chr1 (266-323)||(31768413-31768471)
chr1 (298-355)||(50992867-50992924)
chr1 (274-329)||(28237344-28237400)
[»] scaffold0318 (1 HSPs)
scaffold0318 (263-360)||(6493-6591)
[»] scaffold0096 (2 HSPs)
scaffold0096 (399-480)||(32509-32593)
scaffold0096 (294-342)||(32453-32501)
[»] scaffold0475 (1 HSPs)
scaffold0475 (266-321)||(6353-6409)


Alignment Details
Target: chr3 (Bit Score: 444; Significance: 0; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 13 - 585
Target Start/End: Original strand, 47761000 - 47761570
Alignment:
Q  13 taggtcaaaattacgcgcggcccattaatatccatagccttttgtagtttagcccttttgtcnnnnnnntccttgcatgattgaggg-tagtagttgctt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||||    
T  47761000 taggtcaaaattacgcgcggcccattaatatccatagccttttgtagtttagcccttttgtcaaaaaaatccttgcatgattgaggggtagtagttgctt 47761099  T
Q  112 tgtggggtgcacgttgctcattcttgttgtatttcatacaagacaacatgagcaagtcactcgttcatacccctacaagggaactgttgggtgnnnnnnn 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    |||||||||||||||||||           
T  47761100 tgtggggtgcacgttgctcattcttgttgtatttcatacaagacaacatgagcaattcactcgttcatac----acaagggaactgttgggtgaaaaaaa 47761195  T
Q  212 caacgaaattaaagaacaatgataacattgtcatagttttgaatacttgactttactataacttttacccgtgctaccgcccgg-tcataaataatggag 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||| |||||||||||||||    
T  47761196 caacgaaattaaagaacaatgataacattgtcatagttttgaatacttgactttactataacttttatccgtgctaccgttcgggtcataaataatggag 47761295  T
Q  311 aagttaatatattgcaataagatccattacatagaaaataaaacaattcaattgaaactatcttttaggacatgcaacagttgctcaaacattttggaat 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47761296 aagttaatatattgcaataagatccattacatagaaaataaaacaattcaattgaaactatcttttaggacatacaacagttgctcaaacattttggaat 47761395  T
Q  411 atctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaacacgtgagattg 510  Q
    || |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  47761396 atttctttgtatactacatttgaagtggtgttgatacaatccctattgtcatccgttgataatatgttcagacgatctcttgatgtaacacgtgagattg 47761495  T
Q  511 caacatatacttgtagtcgtaatacatcttaatttcgtcgtaacattcagactcggcattatagaagaatgcagt 585  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  47761496 caacatatacttgtagtcgtaatacatcttaatttcgtcgtaacattcagacccggtgttatagaagaatgcagt 47761570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 524
Target Start/End: Original strand, 24758896 - 24759021
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    |||||||  |||||||| || || |||||||||||||||||||| ||||||||  |||| ||| ||||| |||||||||||| || ||| ||||||||||    
T  24758896 acattttcaaatatctccttataaactacatttgaagtggtgttaatacaatctccattgtcaaccgttaataatatcttcagaccatcccttgatgtaa 24758995  T
Q  499 cacgtgagattgcaacatatacttgt 524  Q
    ||||||| ||||||||||||| ||||    
T  24758996 cacgtgatattgcaacatatagttgt 24759021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 524
Target Start/End: Original strand, 24767893 - 24768018
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    |||||||  |||||||| || || |||||||||||||||||||| ||||||||  |||| ||| ||||| |||||||||||| || ||| ||||||||||    
T  24767893 acattttcaaatatctccttataaactacatttgaagtggtgttaatacaatctccattgtcaaccgttaataatatcttcagaccatcccttgatgtaa 24767992  T
Q  499 cacgtgagattgcaacatatacttgt 524  Q
    ||||||| ||||||||||||| ||||    
T  24767993 cacgtgatattgcaacatatagttgt 24768018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 524
Target Start/End: Complemental strand, 24813245 - 24813120
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    |||||||  |||||||| || || |||||||||||||||||||| ||||||||  |||| ||| ||||| |||||||||||| || ||| ||||||||||    
T  24813245 acattttcaaatatctccttataaactacatttgaagtggtgttaatacaatctccattgtcaaccgttaataatatcttcagaccatcccttgatgtaa 24813146  T
Q  499 cacgtgagattgcaacatatacttgt 524  Q
    ||||||| ||||||||||||| ||||    
T  24813145 cacgtgatattgcaacatatagttgt 24813120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 524
Target Start/End: Complemental strand, 24827118 - 24826993
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    |||||||  |||||||| || || |||||||||||||||||||| ||||||||  |||| ||| ||||| |||||||||||| || ||| ||||||||||    
T  24827118 acattttcaaatatctccttataaactacatttgaagtggtgttaatacaatctccattgtcaaccgttaataatatcttcagaccatcccttgatgtaa 24827019  T
Q  499 cacgtgagattgcaacatatacttgt 524  Q
    ||||||| ||||||||||||| ||||    
T  24827018 cacgtgatattgcaacatatagttgt 24826993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 399 - 519
Target Start/End: Complemental strand, 37984964 - 37984844
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||  || || |||||||||||||||||| ||||||||||| || | ||||||||| |||||||||||| |  ||| ||||||||||    
T  37984964 acattttcgaatatcttcttataaactacatttgaagtggtgctgatacaatccccaatgtcatccgttaataatatcttcagatcatcccttgatgtaa 37984865  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  37984864 cacgtgatattgcaacatata 37984844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 408 - 519
Target Start/End: Original strand, 53024811 - 53024921
Alignment:
Q  408 aatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaacacgtgaga 507  Q
    |||||||| || || |||||||||||||||||||| ||||||||  |||| |||| |||| |||||||||||| || ||| ||||||||||||||||| |    
T  53024811 aatatctccttataaactacatttgaagtggtgttaatacaatctccattgtcattcgtt-ataatatcttcagaccatcccttgatgtaacacgtgata 53024909  T
Q  508 ttgcaacatata 519  Q
    ||||||||||||    
T  53024910 ttgcaacatata 53024921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 399 - 519
Target Start/End: Complemental strand, 31687750 - 31687629
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataat-atcttcatacgatctcttgatgta 497  Q
    ||||||| |||||| || || || |||||||||||||||||| ||||||||||| |||| ||||  ||| ||||| ||||||| || ||| |||||||||    
T  31687750 acattttcgaatatttccttataaactacatttgaagtggtgctgatacaatccccattgtcatatgttaataataatcttcagaccatcccttgatgta 31687651  T
Q  498 acacgtgagattgcaacatata 519  Q
    |||||||| |||||||||||||    
T  31687650 acacgtgatattgcaacatata 31687629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 399 - 524
Target Start/End: Original strand, 33648255 - 33648380
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    |||||||  |||||||| || || |||||||||||||||||||| |||  |||| |||| ||||||||| |||||||||||| || ||| ||||| ||||    
T  33648255 acattttcaaatatctccttataaactacatttgaagtggtgttaatattatccccattgtcatccgttaataatatcttcagaccatcccttgacgtaa 33648354  T
Q  499 cacgtgagattgcaacatatacttgt 524  Q
    || |||| ||||||||||||| ||||    
T  33648355 catgtgatattgcaacatatagttgt 33648380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 13867399 - 13867487
Alignment:
Q  266 actataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaa 353  Q
    |||| ||||||||| ||||||||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||||||| |||| ||||    
T  13867399 actagaacttttactcgtgctaccgctcgggtcataaacaatggagaagctaatatattgcaataagatccattacataaaaaaaaaaa 13867487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 519
Target Start/End: Complemental strand, 17689548 - 17689428
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| |||||| || || || |||||||||||| ||||| ||||| ||||| |||| ||||| ||| |||||||||||| || ||| ||||||||||    
T  17689548 acattttcgaatatttccttataaactacatttgaaatggtgctgatataatccccattgtcatctgttaataatatcttcagaccatcccttgatgtaa 17689449  T
Q  499 cacgtgagattgcaacatata 519  Q
    || |||| |||||||||||||    
T  17689448 catgtgatattgcaacatata 17689428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 399 - 517
Target Start/End: Complemental strand, 19769772 - 19769654
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    |||||||  |||||||| || || |||||||||||||||||| ||||||||||  |||| ||||||||| |||||||||| | |  ||| |||| |||||    
T  19769772 acattttcaaatatctccttataaactacatttgaagtggtgctgatacaatctccattgtcatccgttaataatatctttagattatcccttgttgtaa 19769673  T
Q  499 cacgtgagattgcaacata 517  Q
    ||||||| |||||||||||    
T  19769672 cacgtgatattgcaacata 19769654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 373 - 499
Target Start/End: Original strand, 32790915 - 32791041
Alignment:
Q  373 ttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataa 472  Q
    ||||||||||| |||||| || ||| | |||||  ||||||||||| || |||||||||||||||||||   |||| |||||||| |||| |||| ||||    
T  32790915 ttttaggacatacaacaggtgttcacatatttttaaatatctctttctacactacatttgaagtggtgtaattacactcctcattgtcatgcgttaataa 32791014  T
Q  473 tatcttcatacgatctcttgatgtaac 499  Q
    |||||||| || ||||||| |||||||    
T  32791015 tatcttcaaaccatctcttaatgtaac 32791041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 273 - 355
Target Start/End: Complemental strand, 52134681 - 52134598
Alignment:
Q  273 cttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaaca 355  Q
    ||||||||| ||||||||||||| ||||||| |||||||||| ||||||||||||||| |||| |||| ||||| || ||||||    
T  52134681 cttttacccatgctaccgcccgggtcataaacaatggagaagctaatatattgcaatatgatcaattatatagataagaaaaca 52134598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 3848229 - 3848147
Alignment:
Q  264 ttactataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacataga 345  Q
    |||||| |||||||||||||||||||| |||| ||||||| || ||||||  ||||||| |||||||||||||||||| ||||    
T  3848229 ttactagaacttttacccgtgctaccgtccgggtcataaacaaaggagaaactaatatagtgcaataagatccattacgtaga 3848147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 442 - 519
Target Start/End: Original strand, 24129220 - 24129297
Alignment:
Q  442 tgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaacacgtgagattgcaacatata 519  Q
    ||||||||||| |||| ||||| ||||||||||| |||| || ||| ||||||||||||||| | |||||||||||||    
T  24129220 tgatacaatccccattgtcatctgttgataatatattcagaccatcccttgatgtaacacgtaatattgcaacatata 24129297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 11396803 - 11396747
Alignment:
Q  266 actataacttttacccgtgctaccgccc-ggtcataaataatggagaagttaatata 321  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  11396803 actagaacttttacccgtgctaccgcccgggtcataaacaatggagaagttaatata 11396747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 399 - 480
Target Start/End: Original strand, 12531306 - 12531388
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaa-gtggtgttgatacaatcctcattatcatccgttgataatatcttca 480  Q
    ||||||| ||||||||| || || |||||||||||| |||||| ||||||||||| |||| |||||||||  |||||||||||    
T  12531306 acattttcgaatatctccttataaactacatttgaaagtggtgctgatacaatccccattgtcatccgttagtaatatcttca 12531388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 11396704 - 11396607
Alignment:
Q  402 ttttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaac 499  Q
    |||| |||||||||||| || ||||| |||||||||||||   |||| ||| |||| |||| |||| |||||||||||| || ||||||| |||||||    
T  11396704 ttttcgaatatctctttatacactacgtttgaagtggtgtaattacagtccccattgtcatgcgttaataatatcttcagaccatctcttaatgtaac 11396607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 452
Target Start/End: Complemental strand, 50835573 - 50835520
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcc 452  Q
    ||||||||||| | |||||| |||||||||||| ||||||||||||||||||||    
T  50835573 acattttggaacacctctttatatactacatttcaagtggtgttgatacaatcc 50835520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 452
Target Start/End: Original strand, 50840280 - 50840333
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcc 452  Q
    ||||||||||| | |||||| |||||||||||| ||||||||||||||||||||    
T  50840280 acattttggaacacctctttatatactacatttcaagtggtgttgatacaatcc 50840333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 12531396 - 12531444
Alignment:
Q  294 ggtcataaataatggagaagttaatatattgcaataagatccattacat 342  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  12531396 ggtcataaacaatggagaagctaatatattgcaatatgatccattacat 12531444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 321
Target Start/End: Complemental strand, 28907630 - 28907579
Alignment:
Q  271 aacttttacccgtgctaccgccc-ggtcataaataatggagaagttaatata 321  Q
    |||||||||||||||||| |||| ||||||||| |||||||||| |||||||    
T  28907630 aacttttacccgtgctactgcccgggtcataaacaatggagaaggtaatata 28907579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 6e-45; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 264 - 467
Target Start/End: Original strand, 11646703 - 11646907
Alignment:
Q  264 ttactataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaat 362  Q
    |||||| ||||||||||||||||||||| ||| ||||||| |||||||||  |||||||||||||||  |||| ||||||||| || |||| |||||||     
T  11646703 ttactagaacttttacccgtgctaccgctcgggtcataaacaatggagaaactaatatattgcaatattatcctttacatagataagaaaataattcaac 11646802  T
Q  363 tgaaactatcttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcat 462  Q
      |||| || ||||||| ||| ||||||||||||| |||||||| ||||||||||| || ||||||||||||||||| ||||||||||| |||||  |||    
T  11646803 ataaacaatattttaggtcatacaacagttgctcacacattttgaaatatctctttatacactacatttgaagtggttttgatacaatcgtcattggcat 11646902  T
Q  463 ccgtt 467  Q
    |||||    
T  11646903 ccgtt 11646907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 264 - 467
Target Start/End: Complemental strand, 13764995 - 13764791
Alignment:
Q  264 ttactataacttttacccgtgctaccgcccg-gtcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaat 362  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||| |||| |||| ||||| || ||||||||||||     
T  13764995 ttactagaacttttacccgtgctaccgcccgagtcataaacaatggaaaagctaatatattgcaatatgatctattatatagataagaaaacaattcaac 13764896  T
Q  363 tgaaactatcttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcat 462  Q
      || | || |||||||||||  |||| ||  ||| |||||||||||||| ||||| || |||||||||||||||||||||||| |||| ||||| ||||    
T  13764895 ataatcaatattttaggacatataacaattattcacacattttggaatatatctttatacactacatttgaagtggtgttgatataatcttcattgtcat 13764796  T
Q  463 ccgtt 467  Q
    |||||    
T  13764795 ccgtt 13764791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 26906675 - 26906795
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || |||||||||||| ||||||||||||||||  |||| ||||||||| |||||||||||| || ||| ||||||||||    
T  26906675 acattttcgaatatctccttataaactacatttgaaatggtgttgatacaatctccattgtcatccgttaataatatcttcagaccatcccttgatgtaa 26906774  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  26906775 cacgtgatattgcaacatata 26906795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 43070290 - 43070410
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || |||||||||||||||||| ||||||||||| |||| ||||||||| ||||| |||||| || ||| ||||||||||    
T  43070290 acattttcgaatatctccttataaactacatttgaagtggtgctgatacaatccccattgtcatccgttaataatttcttcagaccatcccttgatgtaa 43070389  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  43070390 cacgtgatattgcaacatata 43070410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 271 - 353
Target Start/End: Original strand, 7448981 - 7449064
Alignment:
Q  271 aacttttacccgtgctaccgcccg-gtcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaa 353  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  7448981 aacttttatccgtgctaccgcccgagtcataaacaatggagaagttaatatattgcaataagatccattacataggaaaaaaaa 7449064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 399 - 519
Target Start/End: Complemental strand, 14232092 - 14231971
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgat-ctcttgatgta 497  Q
    ||||||| ||||||||| || || |||||||||||||||||  | ||||||||| |||| ||||||||| |||||||||||| || || | |||||||||    
T  14232092 acattttcgaatatctccttataaactacatttgaagtggtccttatacaatccccattgtcatccgttaataatatcttcagaccatccccttgatgta 14231993  T
Q  498 acacgtgagattgcaacatata 519  Q
    |||||||| |||||||||||||    
T  14231992 acacgtgatattgcaacatata 14231971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 272 - 480
Target Start/End: Complemental strand, 44548578 - 44548370
Alignment:
Q  272 acttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaattgaaacta 370  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||||||||| | ||| ||||| ||||| || ||||||||||||    ||| |    
T  44548578 acttttacccgtgctaccgcccgggtcataaactatggagaa-ttaatatattgcaaaatgattcattatatagataaaaaaacaattcaacatcaacaa 44548480  T
Q  371 tcttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactaca-tttgaagtggtgttgatacaatcctcattatcatccgttga 469  Q
    | |||||| |||| |||| | || | | ||||||| ||||||||||||  | |||| | |||||||||||||  ||||||| |||||  ||||||||| |    
T  44548479 tattttagaacatacaacgggtgtttacacattttagaatatctctttaaacactaaattttgaagtggtgtcaatacaat-ctcatcgtcatccgttaa 44548381  T
Q  470 taatatcttca 480  Q
    |||||||||||    
T  44548380 taatatcttca 44548370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 423 - 519
Target Start/End: Original strand, 48847147 - 48847243
Alignment:
Q  423 actacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaacacgtgagattgcaacatata 519  Q
    |||||||||||||||||| | |||||||||||||| ||||  ||| |||||||||||| || ||| ||||||||||||| ||| |||||||||||||    
T  48847147 actacatttgaagtggtgctaatacaatcctcattgtcatatgttaataatatcttcagaccatcccttgatgtaacacatgatattgcaacatata 48847243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 424 - 519
Target Start/End: Complemental strand, 1264790 - 1264695
Alignment:
Q  424 ctacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaacacgtgagattgcaacatata 519  Q
    ||||||||||||||||| | |||||||||||||| ||||  ||| |||||||||||| || ||| ||||||||||||| ||| |||||||||||||    
T  1264790 ctacatttgaagtggtgctaatacaatcctcattgtcatatgttaataatatcttcagaccatcccttgatgtaacacatgatattgcaacatata 1264695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 355
Target Start/End: Complemental strand, 6841464 - 6841381
Alignment:
Q  273 cttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaaca 355  Q
    |||||||||||||||| |||| ||||||||| |||||||||| ||||||||| || || |||| |||||||||| || ||||||    
T  6841464 cttttacccgtgctactgcccgggtcataaacaatggagaagctaatatattacactatgatcaattacatagataagaaaaca 6841381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 39704319 - 39704368
Alignment:
Q  265 tactataacttttacccgtgctaccgccc-ggtcataaataatggagaag 313  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  39704319 tactataacttttacccgtgctaccgcccaggtcataaacaatggagaag 39704368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 266 - 329
Target Start/End: Complemental strand, 39445888 - 39445824
Alignment:
Q  266 actataacttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatattgcaata 329  Q
    |||| ||||||||||||||||||||||| ||||||||| || ||||||| |||||| ||| ||||    
T  39445888 actagaacttttacccgtgctaccgcccgggtcataaacaaaggagaaggtaatatgttgtaata 39445824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 332 - 440
Target Start/End: Complemental strand, 35858532 - 35858425
Alignment:
Q  332 atccattacatagaaaataaaacaattcaattgaaactatcttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactacattt 431  Q
    |||||||||||||| || ||||||| ||||   |||| ||  |||||||||| ||||||||| ||| |||||||  ||||  ||| | || |||||||||    
T  35858532 atccattacatagataa-aaaacaactcaacataaacaatagtttaggacatacaacagttgttcatacattttaaaatacatctgtatacactacattt 35858434  T
Q  432 gaagtggtg 440  Q
    |||||||||    
T  35858433 gaagtggtg 35858425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 9e-44; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 385 - 519
Target Start/End: Complemental strand, 24262683 - 24262549
Alignment:
Q  385 caacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacg 484  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||| | |      
T  24262683 caacagttgttcaaacattttggaatatctctttatatactacatttgaagtggtgttgatacaatcatcattgtcatctgttaataatatctttagatc 24262584  T
Q  485 atctcttgatgtaacacgtgagattgcaacatata 519  Q
    ||||||||||| |||||||||||||||||||||||    
T  24262583 atctcttgatgcaacacgtgagattgcaacatata 24262549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 29861375 - 29861495
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| |||||| || || || |||||||||||||||||| ||||||||||| |||| ||||| ||| ||||||| |||| || ||||||||||||||    
T  29861375 acattttcgaatatttccttataaactacatttgaagtggtgctgatacaatccccattgtcatctgttaataatattttcagaccatctcttgatgtaa 29861474  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  29861475 cacgtgatattgcaacatata 29861495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 41813546 - 41813488
Alignment:
Q  266 actataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatatt 323  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||||||    
T  41813546 actagaacttttacccgtgctaccgcccggatcataaacaatggagaagctaatatatt 41813488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 491
Target Start/End: Original strand, 17404837 - 17404955
Alignment:
Q  373 ttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataa 472  Q
    ||||||||||| |||||  || ||| ||||||| |||||||||||| || || ||||||||||||||||   || | ||| |||| |||| || | ||||    
T  17404837 ttttaggacatacaacaagtgttcacacattttcgaatatctctttatacacaacatttgaagtggtgtaattatagtccccattgtcatgcgctaataa 17404936  T
Q  473 tatcttcatacgatctctt 491  Q
    |||||||| || |||||||    
T  17404937 tatcttcagaccatctctt 17404955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 362
Target Start/End: Original strand, 21207392 - 21207483
Alignment:
Q  272 acttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaat 362  Q
    |||||||||||||||||||||| || ||| || |||||| ||| | ||||||||||||| |||  ||||||| ||| | ||||| |||||||    
T  21207392 acttttacccgtgctaccgcccgggacattaacaatggaaaagctgatatattgcaatatgatttattacatcgaatacaaaacgattcaat 21207483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 17404766 - 17404824
Alignment:
Q  264 ttactataacttttacccgtgctaccgc-ccggtcataaataatggagaagttaatata 321  Q
    |||||| ||||||||||||||||||||| | ||||||||| |||||||||  |||||||    
T  17404766 ttactagaacttttacccgtgctaccgctcgggtcataaacaatggagaaactaatata 17404824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 2e-41; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 282 - 439
Target Start/End: Complemental strand, 10095495 - 10095337
Alignment:
Q  282 gtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaattgaaactatcttttagga 380  Q
    ||||||||| |||| ||||||| |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||| |  ||||||||||||||| |    
T  10095495 gtgctaccgtccgggtcataaacaatggagaagctaatatattgcaatatgatccattgcatagaaaataaaacaattcgacagaaactatcttttagaa 10095396  T
Q  381 catgcaacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggt 439  Q
    ||| ||||||||| |||| ||||||| ||||| ||||| || |||||||||||||||||    
T  10095395 catacaacagttgttcaatcattttgaaatatttctttataaactacatttgaagtggt 10095337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 272 - 467
Target Start/End: Complemental strand, 27447264 - 27447068
Alignment:
Q  272 acttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaattgaaacta 370  Q
    |||||||||||||||||||||||| ||||||| |||||| ||| ||| ||||| ||||| |||| |||| ||||| || ||||||||||||   || | |    
T  27447264 acttttacccgtgctaccgcccgggtcataaacaatggaaaagctaacatattacaatatgatctattatatagataagaaaacaattcaacataatcaa 27447165  T
Q  371 tcttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgtt 467  Q
    | ||||||||||| ||||| ||  ||| |||||||| ||||||||||| || ||||||||| |||||||||||| | ||||  |||| |||||||||    
T  27447164 tattttaggacatacaacaattattcacacattttgaaatatctctttatacactacatttaaagtggtgttgaaataatctccattgtcatccgtt 27447068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 21999272 - 21999392
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| |||||| || || || |||||||||||||||||| ||||||||||| |||| ||||| ||| ||||||||||||||| ||| ||||||||||    
T  21999272 acatttttgaatatttccttataaactacatttgaagtggtgctgatacaatccccattgtcatctgttaataatatcttcataccatcccttgatgtaa 21999371  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| ||||||| |||||    
T  21999372 cacgtgatattgcaatatata 21999392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 265 - 348
Target Start/End: Complemental strand, 19121508 - 19121424
Alignment:
Q  265 tactataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaa 348  Q
    ||||| |||||||||||||||||||| |||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  19121508 tactagaacttttacccgtgctaccgtccgggtcatagacaatggagaagttaatatattgcaataagattcattacatagaaaa 19121424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 31891390 - 31891510
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| |||||| || || || |||| ||||||||||||  ||||||||||| |||| ||||  ||| |||||||||||| || ||| ||||||||||    
T  31891390 acattttcgaatatttccttataaactatatttgaagtggtactgatacaatccccattgtcatatgttaataatatcttcagaccatcccttgatgtaa 31891489  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  31891490 cacgtgatattgcaacatata 31891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 265 - 355
Target Start/End: Original strand, 30906235 - 30906326
Alignment:
Q  265 tactataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaaca 355  Q
    ||||| ||||||||||||||||||||||||| ||||||| || |||||| ||||||||||  |||| |||||||||||||||||| ||||||    
T  30906235 tactagaacttttacccgtgctaccgcccgggtcataaacaacggagaaattaatatattataatatgatccattacatagaaaacaaaaca 30906326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 499
Target Start/End: Complemental strand, 22681879 - 22681779
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| |||||||||||| || |||||||||||||||||||   |||| ||| |||| |||| |||| |||||||||||| || ||||||| ||||||    
T  22681879 acattttcgaatatctctttatacactacatttgaagtggtgtaattacagtccccattgtcatgcgttaataatatcttcagaccatctcttaatgtaa 22681780  T
Q  499 c 499  Q
    |    
T  22681779 c 22681779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 8977059 - 8976996
Alignment:
Q  265 tactataacttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatattgcaa 327  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||| ||| |||||||||||||    
T  8977059 tactagaacttttacccgtgctaccgcccgggtcataaacaatggaaaagctaatatattgcaa 8976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 33051359 - 33051422
Alignment:
Q  266 actataacttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatattgcaat 328  Q
    |||| |||||||| |||||||||||||| ||||||||| |||||||||| |||||| |||||||    
T  33051359 actagaacttttatccgtgctaccgcccgggtcataaacaatggagaaggtaatatgttgcaat 33051422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 360
Target Start/End: Original strand, 233827 - 233924
Alignment:
Q  264 ttactataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattca 360  Q
    |||||| ||| | ||||| ||||||||| ||| ||||||||||| |||||| |   ||||||||| | ||||||| ||||||||||||||| ||||||    
T  233827 ttactagaacatatacccatgctaccgcacgggtcataaataattgagaaggtctaatattgcaacatgatccataacatagaaaataaaaaaattca 233924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 325
Target Start/End: Original strand, 2918380 - 2918433
Alignment:
Q  273 cttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatattgc 325  Q
    ||||||||||||||||||||| || ||| || ||||||||||||||||||||||    
T  2918380 cttttacccgtgctaccgcccgggacattaaaaatggagaagttaatatattgc 2918433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 3066494 - 3066429
Alignment:
Q  265 tactataacttttacccgtgctaccgcc-cggtcataaataatggagaagttaatatattgcaata 329  Q
    ||||| ||||||||||||||||||||||  ||||||||| |||||||||| |||||| ||| ||||    
T  3066494 tactagaacttttacccgtgctaccgcctgggtcataaacaatggagaaggtaatatgttgtaata 3066429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 33481843 - 33481903
Alignment:
Q  271 aacttttacccgtgctaccgccc-ggtcataaa-taatggagaagttaatatattgcaata 329  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||| || ||||||||    
T  33481843 aacttttacccgtgctaccgcccaggtcataaaccaatggagaagttaacatgttgcaata 33481903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 4659056 - 4659112
Alignment:
Q  266 actataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatata 321  Q
    |||| |||||||||||||||||||| |||| ||||||| |||||||||  |||||||    
T  4659056 actagaacttttacccgtgctaccgaccggatcataaacaatggagaaactaatata 4659112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 266 - 457
Target Start/End: Original strand, 2040163 - 2040351
Alignment:
Q  266 actataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaattg 364  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||| ||||||||| || |||| ||||||        
T  2040163 actagaacttttacccgtgctaccgcccgggtcataaataatggagaaattaatatattgcaatattatcctttacatagataagaaaataattcagcat 2040262  T
Q  365 aaactatcttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcatt 457  Q
    |||| || ||||||| ||| ||    ||||||| |||||||| ||||||||||| || ||||||||||||||||| ||||||||||| |||||    
T  2040263 aaacaatattttaggtcataca----ttgctcacacattttgaaatatctctttatacactacatttgaagtggttttgatacaatcatcatt 2040351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 23347888 - 23348008
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || |||||||||||||||||| ||||||||||| |||| ||||||||| ||||| |||||| || ||| ||||||||||    
T  23347888 acattttcgaatatctccttataaactacatttgaagtggtgctgatacaatccccattgtcatccgttaataatttcttcagaccatcccttgatgtaa 23347987  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  23347988 cacgtgatattgcaacatata 23348008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 18354215 - 18354335
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || |||||||||||||||||| ||||||||||  |||| ||||||||| ||||| |||||| || ||| ||||||||||    
T  18354215 acattttcgaatatctccttataaactacatttgaagtggtgctgatacaatctccattgtcatccgttaataatttcttcagaccatcccttgatgtaa 18354314  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  18354315 cacgtgatattgcaacatata 18354335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 399 - 519
Target Start/End: Complemental strand, 12742855 - 12742735
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || |||||||||||||||||| ||||| ||| | |||| ||||||||| ||||| |||||| || ||| ||||||||||    
T  12742855 acattttcgaatatctccttataaactacatttgaagtggtgctgatataattcccattgtcatccgttaataatttcttcagaccatcccttgatgtaa 12742756  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  12742755 cacgtgatattgcaacatata 12742735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 431 - 519
Target Start/End: Complemental strand, 30015642 - 30015554
Alignment:
Q  431 tgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaacacgtgagattgcaacatata 519  Q
    |||||||||||||||||||||| |||| |||||| || |||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  30015642 tgaagtggtgttgatacaatccccattgtcatccattaataatatcttcaaaccatctcttgatgtaacacgtgatattgcaacatata 30015554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 365 - 494
Target Start/End: Original strand, 30044966 - 30045098
Alignment:
Q  365 aaactatcttttaggacatgcaacagttgctcaaacattttggaatatctct---ttgtatactacatttgaagtggtgttgatacaatcctcattatca 461  Q
    |||||||||||||||||||  |||||||| ||| |||| |||||||||||||   || |||| |||||||||||||||||||||||||||| |||| |||    
T  30044966 aaactatcttttaggacatataacagttgttcatacatgttggaatatctctaatttatatagtacatttgaagtggtgttgatacaatccccattgtca 30045065  T
Q  462 tccgttgataatatcttcatacgatctcttgat 494  Q
    ||| || ||||||| |||| || || |||||||    
T  30045066 tccattaataatatattcaaaccatatcttgat 30045098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 365 - 494
Target Start/End: Original strand, 30050129 - 30050261
Alignment:
Q  365 aaactatcttttaggacatgcaacagttgctcaaacattttggaatatctct---ttgtatactacatttgaagtggtgttgatacaatcctcattatca 461  Q
    |||||||||||||||||||  |||||||| ||| |||| |||||||||||||   || |||| |||||||||||||||||||||||||||| |||| |||    
T  30050129 aaactatcttttaggacatataacagttgttcatacatgttggaatatctctaatttatatagtacatttgaagtggtgttgatacaatccccattgtca 30050228  T
Q  462 tccgttgataatatcttcatacgatctcttgat 494  Q
    ||| || ||||||| |||| || || |||||||    
T  30050229 tccattaataatatattcaaaccatatcttgat 30050261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 365 - 494
Target Start/End: Original strand, 30141173 - 30141305
Alignment:
Q  365 aaactatcttttaggacatgcaacagttgctcaaacattttggaatatctct---ttgtatactacatttgaagtggtgttgatacaatcctcattatca 461  Q
    |||||||||||||||||||  |||||||| ||| |||| |||||||||||||   || |||| |||||||||||||||||||||||||||| |||| |||    
T  30141173 aaactatcttttaggacatataacagttgttcatacatgttggaatatctctaatttatatagtacatttgaagtggtgttgatacaatccccattgtca 30141272  T
Q  462 tccgttgataatatcttcatacgatctcttgat 494  Q
    ||| || ||||||| |||| || || |||||||    
T  30141273 tccattaataatatattcaaaccatatcttgat 30141305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 431 - 519
Target Start/End: Complemental strand, 30074739 - 30074651
Alignment:
Q  431 tgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaacacgtgagattgcaacatata 519  Q
    |||||||||||||||||||||  |||| |||||| || |||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  30074739 tgaagtggtgttgatacaatctccattgtcatccattaataatatcttcaaaccatctcttgatgtaacacgtgatattgcaacatata 30074651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 30242783 - 30242895
Alignment:
Q  304 aatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaattgaaactatcttttaggacatgcaacagttgctcaaacatt 403  Q
    |||||||||| |||||||||||||||  || ||||||||||| || ||||||||| ||   ||||||||||| |||||||  |||||||| ||| || |     
T  30242783 aatggagaagctaatatattgcaatataattcattacatagataagaaaacaatttaacataaactatctttgaggacatataacagttgttcacacgtg 30242882  T
Q  404 ttggaatatctct 416  Q
    |||||||||||||    
T  30242883 ttggaatatctct 30242895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 362
Target Start/End: Original strand, 1613194 - 1613285
Alignment:
Q  272 acttttacccgtgctaccgcccggt-cataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaat 362  Q
    ||||||| |||| |||||||||||  ||| || ||| |||||||| ||||||||||||| |||| ||||||| ||||||||||| |||||||    
T  1613194 acttttatccgtactaccgcccggaacattaacaattgagaagttgatatattgcaatatgatctattacatcgaaaataaaacgattcaat 1613285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 402 - 499
Target Start/End: Complemental strand, 9211634 - 9211537
Alignment:
Q  402 ttttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaac 499  Q
    |||| |||||||||||| |  ||||||| |||||||||||   |||| |||||||| |||| |||| |||||||||||| || ||||||| |||||||    
T  9211634 tttttgaatatctctttatgcactacatatgaagtggtgtaattacagtcctcattgtcatgcgttaataatatcttcagaccatctcttaatgtaac 9211537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 925111 - 925055
Alignment:
Q  274 ttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatattgcaata 329  Q
    |||||| ||||||||||||| ||| |||||||||||||||| |||||||||| ||||    
T  925111 ttttactcgtgctaccgcccaggttataaataatggagaagctaatatattgtaata 925055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 272 - 467
Target Start/End: Original strand, 40094 - 40290
Alignment:
Q  272 acttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaattgaaacta 370  Q
    |||||||||||||||||||||||| ||||||| |||||| ||| ||| ||||| ||||| |||| |||| ||||| || ||||||||||||   || | |    
T  40094 acttttacccgtgctaccgcccgggtcataaacaatggaaaagctaacatattacaatatgatctattatatagataagaaaacaattcaacataatcaa 40193  T
Q  371 tcttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgtt 467  Q
    | ||||||||||| ||||| ||  ||| |||||||| ||||||||||| || ||||||||| |||||||||||| | ||||  |||| |||||||||    
T  40194 tattttaggacatacaacaattattcacacattttgaaatatctctttatacactacatttaaagtggtgttgaaataatctccattgtcatccgtt 40290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 266 - 467
Target Start/End: Original strand, 33478 - 33662
Alignment:
Q  266 actataacttttacccgtgctaccgcccg-gtcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaattg 364  Q
    |||| |||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||                  |||||||||||       
T  33478 actagaacttttacccgtgctaccgcccgagtcataaacaatggaaaagctaatatattgcaataaga------------------aaacaattcaacat 33559  T
Q  365 aaactatcttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatcc 464  Q
    || | || ||||||||||| ||||| ||  ||| ||||||||||||||| |||| ||||||||||||||||||||||||||| ||||  |||| ||||||    
T  33560 aatcaatattttaggacatacaacaattattcacacattttggaatatcactttatatactacatttgaagtggtgttgatataatctccattgtcatcc 33659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 401 - 519
Target Start/End: Complemental strand, 9045014 - 9044896
Alignment:
Q  401 attttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaaca 500  Q
    ||||| ||||||||| || || |||||||||||||||||| ||||||||||| |||| ||||||||| ||||| |||||| || ||| ||||||||||||    
T  9045014 attttcgaatatctccttataaactacatttgaagtggtgctgatacaatccccattgtcatccgttaataatttcttcagaccatcccttgatgtaaca 9044915  T
Q  501 cgtgagattgcaacatata 519  Q
    ||||| |||||||||||||    
T  9044914 cgtgatattgcaacatata 9044896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 7472416 - 7472536
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || |||||||||||||||||| ||||||||||  |||| ||||||||| ||||| |||||| || ||| ||||||||||    
T  7472416 acattttcgaatatctccttataaactacatttgaagtggtgctgatacaatctccattgtcatccgttaataatttcttcagaccatcccttgatgtaa 7472515  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  7472516 cacgtgatattgcaacatata 7472536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 30442804 - 30442924
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || |||||||||||||||||  | ||||||||| |||| ||||||||| |||||||||||| || ||| ||||||||||    
T  30442804 acattttcgaatatctccttataaactacatttgaagtggtccttatacaatccccattgtcatccgttaataatatcttcagaccatcccttgatgtaa 30442903  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  30442904 cacgtgatattgcaacatata 30442924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 519
Target Start/End: Complemental strand, 32872071 - 32871951
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || |||||||||||||||| | ||||||||||| |||| ||||  ||| ||||||||||||||| ||| ||||||||||    
T  32872071 acattttcgaatatctccttataaactacatttgaagtggcgctgatacaatccccattgtcatttgttaataatatcttcataccatcccttgatgtaa 32871972  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  32871971 cacgtgatattgcaacatata 32871951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 402 - 519
Target Start/End: Original strand, 22002963 - 22003080
Alignment:
Q  402 ttttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaacac 501  Q
    |||| ||||||||| || || |||||||||||||||||| ||||||||||| |||| | ||||||| |||||||||||| || ||| ||||||||||| |    
T  22002963 ttttcgaatatctccttataaactacatttgaagtggtgctgatacaatccccattgttatccgttaataatatcttcagactatcccttgatgtaacgc 22003062  T
Q  502 gtgagattgcaacatata 519  Q
    |||| |||||||||||||    
T  22003063 gtgatattgcaacatata 22003080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 30441504 - 30441623
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || |||||||||||||||||| ||||||||||| |||| ||||||||| ||||| |||||| || ||| |||||||| |    
T  30441504 acattttcgaatatctccttataaactacatttgaagtggtgctgatacaatcc-cattgtcatccgttaataatttcttcagaccatcccttgatgtca 30441602  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| | |||||||||||    
T  30441603 cacgtgatactgcaacatata 30441623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 273 - 378
Target Start/End: Original strand, 22004578 - 22004684
Alignment:
Q  273 cttttacccgtgctaccgcccggt-cataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaattgaaactat 371  Q
    |||||||| ||||||||||||||  ||| || |||||||||| ||||||||| ||||| ||| ||||||||||| || ||||||||||||   |||||||    
T  22004578 cttttacctgtgctaccgcccgggacattaaaaatggagaagctaatatattacaatatgattcattacatagataagaaaacaattcaacataaactat 22004677  T
Q  372 cttttag 378  Q
    |||||||    
T  22004678 cttttag 22004684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 19081384 - 19081445
Alignment:
Q  294 ggtcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaaca 355  Q
    ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| ||||||    
T  19081384 ggtcataaacaatggagaagctaatatattgcaatatgatccattacatagaaaagaaaaca 19081445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 362
Target Start/End: Original strand, 4734874 - 4734965
Alignment:
Q  272 acttttacccgtgctaccgcccg-gtcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaat 362  Q
    ||||||||||||||||||||||| | ||| || |||||||||| | ||||||||||| | |||| ||||||| ||||| ||||| |||||||    
T  4734874 acttttacccgtgctaccgcccgagacattaacaatggagaagctgatatattgcaacatgatctattacatcgaaaacaaaacgattcaat 4734965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 272 - 362
Target Start/End: Original strand, 26836407 - 26836498
Alignment:
Q  272 acttttacccgtgctaccgcccggt-cataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaat 362  Q
    ||||||||||||||||||||||||  ||| || |||||| ||  | ||||||||||||| |||| ||||||| ||||| ||||| |||||||    
T  26836407 acttttacccgtgctaccgcccgggacattaacaatggaaaaactgatatattgcaatatgatctattacatcgaaaacaaaacgattcaat 26836498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 29656066 - 29656125
Alignment:
Q  271 aacttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatattgcaata 329  Q
    ||||||||||||||||||||||| ||||||||| || ||||||| |||||| ||||||||    
T  29656066 aacttttacccgtgctaccgcccgggtcataaacaaaggagaaggtaatatgttgcaata 29656125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 7e-29; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 399 - 516
Target Start/End: Complemental strand, 8164012 - 8163895
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || |||||||||||||||||| ||||| ||||| |||| ||||||||| |||||||||||| || ||| ||||||||||    
T  8164012 acattttcgaatatctccttataaactacatttgaagtggtgctgatataatccccattgtcatccgttaataatatcttcaaaccatcccttgatgtaa 8163913  T
Q  499 cacgtgagattgcaacat 516  Q
    ||||||| ||||||||||    
T  8163912 cacgtgatattgcaacat 8163895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 14672481 - 14672601
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| |||||| || || || |||||||||||||||||| ||||||||||| |||| ||||| ||| ||||||| |||| || ||||||||||||||    
T  14672481 acattttcgaatatttccttataaactacatttgaagtggtgctgatacaatccccattgtcatctgttaataatattttcagaccatctcttgatgtaa 14672580  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  14672581 cacgtgatattgcaacatata 14672601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 266 - 448
Target Start/End: Original strand, 1848721 - 1848904
Alignment:
Q  266 actataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaattg 364  Q
    |||||||||||||||   ||||||| |||| ||||||| |||||| ||  |||||||||   ||| ||||||||||||||| ||||||| |||| || |     
T  1848721 actataacttttacctacgctaccgtccgggtcataaacaatggaaaaactaatatattatgatatgatccattacatagataataaaagaattgaactt 1848820  T
Q  365 aaactatcttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggtgttgataca 448  Q
    |||| || |||||||| || ||| ||||| ||| |||||||| || ||||| ||||| |||| ||||||||||||||| |||||    
T  1848821 aaacaatattttaggatatacaatagttgttcacacattttgaaaaatctccttgtacactatatttgaagtggtgttaataca 1848904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 433 - 519
Target Start/End: Original strand, 33686215 - 33686301
Alignment:
Q  433 aagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaacacgtgagattgcaacatata 519  Q
    |||| ||||||||||||||| |||  ||||||||| |||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  33686215 aagtagtgttgatacaatccccatcgtcatccgttaataatatcttcaaaccatctcttgatgtaacacgtgatattgcaacatata 33686301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 266 - 361
Target Start/End: Original strand, 1849846 - 1849942
Alignment:
Q  266 actataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaa 361  Q
    |||| ||| ||||||||||||||| ||||| ||||||| |||||| ||  ||||||||||||||| ||||||||||||||| || ||||||||||||    
T  1849846 actagaacatttacccgtgctaccacccgggtcataaacaatggataaactaatatattgcaatatgatccattacatagataagaaaacaattcaa 1849942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 266 - 361
Target Start/End: Complemental strand, 27671511 - 27671415
Alignment:
Q  266 actataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaa 361  Q
    |||| |||||||||  || |||||| |||| | |||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||    
T  27671511 actagaacttttacttgtactaccgtccggattataaataatggagaagctaattcattgcaatatgatccattacatagaaaataaaacaattcaa 27671415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 271 - 342
Target Start/End: Complemental strand, 33199125 - 33199052
Alignment:
Q  271 aacttttacccgtgctaccgcccgg--tcataaataatggagaagttaatatattgcaataagatccattacat 342  Q
    ||||||||||||||||| | |||||  ||||||| |||||||||| ||||||||||||||||||||||||||||    
T  33199125 aacttttacccgtgctatcacccggggtcataaacaatggagaagataatatattgcaataagatccattacat 33199052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 452
Target Start/End: Complemental strand, 11730443 - 11730390
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcc 452  Q
    ||||||||||| | |||||| |||||||||||| ||||||||||||||||||||    
T  11730443 acattttggaacacctctttatatactacatttcaagtggtgttgatacaatcc 11730390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 452
Target Start/End: Complemental strand, 23740755 - 23740702
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcc 452  Q
    ||||||||||| | |||||| |||||||||||| ||||||||||||||||||||    
T  23740755 acattttggaacacctctttatatactacatttcaagtggtgttgatacaatcc 23740702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 27535501 - 27535549
Alignment:
Q  294 ggtcataaataatggagaagttaatatattgcaataagatccattacat 342  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  27535501 ggtcataaacaatggagaagctaatatattgcaatatgatccattacat 27535549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 15610346 - 15610399
Alignment:
Q  271 aacttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatatt 323  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| || ||||||    
T  15610346 aacttttacccgtgctaccgcccgggtcataaacaatggagaagctagtatatt 15610399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 34346013 - 34345916
Alignment:
Q  265 tactataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaa 361  Q
    ||||| |||||||| || |||||||| |||| ||||||| |||| ||||  ||||| ||||||||| ||| ||||||||||| || |||| |||||||    
T  34346013 tactagaacttttatccttgctaccgtccggatcataaacaatgaagaaactaatacattgcaatatgatacattacatagataagaaaataattcaa 34345916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 27535408 - 27535476
Alignment:
Q  399 acattttggaatatctctttgtatac-tacatttgaagtggtgttgatacaatcctcattatcatccgt 466  Q
    |||||||  |||||||| ||||| || || ||||||||||||| |||||||||||||||| ||||||||    
T  27535408 acattttcaaatatctccttgtaaacataaatttgaagtggtgctgatacaatcctcattgtcatccgt 27535476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 9374612 - 9374671
Alignment:
Q  271 aacttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatattgcaata 329  Q
    |||||||| |||||||||||||| ||||||||| || ||||||| |||||| ||||||||    
T  9374612 aacttttatccgtgctaccgcccgggtcataaacaaaggagaaggtaatatgttgcaata 9374671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 40398821 - 40398875
Alignment:
Q  307 ggagaagttaatatattgcaataagatccattacatagaaaataaaacaattcaa 361  Q
    |||||| ||||||||| |||||| ||||||||| ||||| || ||||||||||||    
T  40398821 ggagaaattaatatatagcaatatgatccattatatagataagaaaacaattcaa 40398875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 399 - 519
Target Start/End: Original strand, 10222 - 10342
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || ||||||||||| |||||| |||||||||||||||| | ||||||| |||||||||||| || ||  ||||||||||    
T  10222 acattttcgaatatctccttataaactacatttgaggtggtgctgatacaatcctcattgttatccgttaataatatcttcagaccattccttgatgtaa 10321  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| || ||||||||||    
T  10322 cacgtgatatcgcaacatata 10342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 399 - 519
Target Start/End: Complemental strand, 37164 - 37044
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| |||||| || || || |||||||||||||||||| ||||||||||| |||| ||||| ||| |||||||||||| || ||| |||||| |||    
T  37164 acattttcgaatatttccttataaactacatttgaagtggtgctgatacaatccccattgtcatctgttaataatatcttcagaccatcccttgatataa 37065  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  37064 cacgtgatattgcaacatata 37044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 7e-26; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 399 - 519
Target Start/End: Complemental strand, 25226862 - 25226742
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataatatcttcatacgatctcttgatgtaa 498  Q
    ||||||| ||||||||| || || | |||||||||||||||  | ||||||||| |||| ||||||||| |||||||||||| || ||| ||||||||||    
T  25226862 acattttcgaatatctccttataaattacatttgaagtggtccttatacaatccccattgtcatccgttaataatatcttcagaccatcccttgatgtaa 25226763  T
Q  499 cacgtgagattgcaacatata 519  Q
    ||||||| |||||||||||||    
T  25226762 cacgtgatattgcaacatata 25226742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 499
Target Start/End: Original strand, 32437561 - 32437687
Alignment:
Q  373 ttttaggacatgcaacagttgctcaaacattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatccgttgataa 472  Q
    |||||||| ||  ||||| || ||| ||||||| |||||||||||| || |||||||||||||||||||   |||| ||| |||| |||| |||| ||||    
T  32437561 ttttaggatatataacaggtgatcacacattttcgaatatctctttatacactacatttgaagtggtgtaattacagtccccattgtcatgcgttaataa 32437660  T
Q  473 tatcttcatacgatctcttgatgtaac 499  Q
    |||||||| || ||||||| |||||||    
T  32437661 tatcttcagaccatctcttaatgtaac 32437687  T

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Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 266 - 355
Target Start/End: Original strand, 23597858 - 23597948
Alignment:
Q  266 actataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaaca 355  Q
    |||| ||||||||||||||| |||| |||| ||||||| |||||||||  ||||||||||||||| ||  ||||||||||| |||||||||    
T  23597858 actaaaacttttacccgtgccaccgtccggctcataaacaatggagaaactaatatattgcaatatgaatcattacatagataataaaaca 23597948  T

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Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 7604858 - 7604917
Alignment:
Q  265 tactataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatatt 323  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||||||    
T  7604858 tactagaacttttacccgtgctaccgcccggatcataaacaatggagaagctaatatatt 7604917  T

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Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 329
Target Start/End: Complemental strand, 42773362 - 42773298
Alignment:
Q  266 actataacttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatattgcaata 329  Q
    |||| ||||||||||||||||||||||| ||||||||| || ||||||| |||||| ||||||||    
T  42773362 actagaacttttacccgtgctaccgcccgggtcataaacaaaggagaaggtaatatgttgcaata 42773298  T

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Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 31768413 - 31768471
Alignment:
Q  266 actataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatatt 323  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||||  |||||||||    
T  31768413 actagaacttttacccgtgctaccgcccggatcataaacaatggagaaactaatatatt 31768471  T

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Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 298 - 355
Target Start/End: Complemental strand, 50992924 - 50992867
Alignment:
Q  298 ataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaaca 355  Q
    ||||| ||| |||||| ||||||||||||||| ||||||||||||| |||| ||||||    
T  50992924 ataaacaatagagaagctaatatattgcaatatgatccattacatataaaagaaaaca 50992867  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 28237344 - 28237400
Alignment:
Q  274 ttttacccgtgctaccgccc-ggtcataaataatggagaagttaatatattgcaata 329  Q
    |||||||||||||||| ||| ||||||||| || ||||||| |||||| ||||||||    
T  28237344 ttttacccgtgctaccacccgggtcataaacaaaggagaaggtaatatgttgcaata 28237400  T

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Target: scaffold0318 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 263 - 360
Target Start/End: Complemental strand, 6591 - 6493
Alignment:
Q  263 tttactataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatatattgcaataagatccattacatagaaaataaaacaattca 360  Q
    ||||||| ||||||||||||||||| ||||||| ||||||  |||||||||  ||||||||||||||| ||||||||||||||| || |||||||||||    
T  6591 tttactagaacttttacccgtgctatcgcccgggtcataaccaatggagaaactaatatattgcaatatgatccattacatagataagaaaacaattca 6493  T

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Target: scaffold0096 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 399 - 480
Target Start/End: Complemental strand, 32593 - 32509
Alignment:
Q  399 acattttggaatatctctttgtatactacatttgaagtggtgttgatacaatcctcattatcatc---cgttgataatatcttca 480  Q
    ||||||| ||||||||| || || |||||||||||||||||| ||||||||||| |||| |||||   |||| ||||||||||||    
T  32593 acattttcgaatatctccttttaaactacatttgaagtggtgctgatacaatccccattgtcatctgtcgttaataatatcttca 32509  T

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Target: scaffold0096; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 32501 - 32453
Alignment:
Q  294 ggtcataaataatggagaagttaatatattgcaataagatccattacat 342  Q
    ||||||||| |||||||||| ||||||||||||||| |||| |||||||    
T  32501 ggtcataaacaatggagaagctaatatattgcaatatgatctattacat 32453  T

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Target: scaffold0475 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 6353 - 6409
Alignment:
Q  266 actataacttttacccgtgctaccgcccgg-tcataaataatggagaagttaatata 321  Q
    |||| |||||||||||||||||||| |||| ||||||| |||||||||  |||||||    
T  6353 actagaacttttacccgtgctaccgaccggatcataaacaatggagaaactaatata 6409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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