View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1358_low_134 (Length: 268)
Name: NF1358_low_134
Description: NF1358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1358_low_134 |
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Alignment Details
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 53172765 - 53173026
Alignment:
| Q |
1 |
tggaagagtcctaatctgttctacgtatcaattgactggatacaattttcatttacatcaaatgtaaatcaacattgggtacgtcatcttatcatgcaaa |
100 |
Q |
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| T |
53172765 |
tggaagagtcctaatctgttctacgtatcaattgactggatacaattttcatttacatcaaatgtaaatcaacattgggtacgtcatcttatcatgcaaa |
53172864 |
T |
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| Q |
101 |
cattagactagtgt----gcactcttaaagatttactagttagaaaactattcataattcaaatagagataggtttttaattcgaaacagattgagtgtt |
196 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53172865 |
cattagactagtgtgtgtgcactcttaaagatttactagttagaaaactattcataattcaaatagagataggtttttaattcgaaacagattgagtgtt |
53172964 |
T |
|
| Q |
197 |
cctaattttaagtttaactagtttctattttctttatgggtattgggttttgtccccctatg |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
53172965 |
cctaattttaagtttaactagtttctattttctttatgggtattgggttttgcccccctatg |
53173026 |
T |
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