View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1358_low_171 (Length: 204)
Name: NF1358_low_171
Description: NF1358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1358_low_171 |
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Alignment Details
Target: chr5 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 37316967 - 37317156
Alignment:
| Q |
1 |
ttattgtataaagttatcaccacaataatctttgtcaaaaaataattaacacggtgtcatattatcagaacctccgtatggtaaaagattgctaggacat |
100 |
Q |
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| T |
37316967 |
ttattttataatgttatcaccacaataatctttgtcaaaaaataattaacacggtgtcatattatcagaacctccgtatggtaaaagattgctaggacat |
37317066 |
T |
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| Q |
101 |
ttga---------------tttaaatccgcaattacaatcctcttagccttctagtttggggcttcacattggtttaatgcagtcaataa |
175 |
Q |
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| T |
37317067 |
ttgatatgataaatgtgagtttaaatccgcaattacaatcctcttagccttctagtttggggcttcacattggtttaatgcagtcaataa |
37317156 |
T |
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