View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1358_low_98 (Length: 328)
Name: NF1358_low_98
Description: NF1358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1358_low_98 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 29 - 315
Target Start/End: Original strand, 40651269 - 40651555
Alignment:
| Q |
29 |
aaatttctcatatctctctcttctccaatattatattttgttggtgaaagttcgttcattctttgaatcaatccatcaatcatcaatggcggaagagaag |
128 |
Q |
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| T |
40651269 |
aaatttctcatatctctctcttctccaatattatattttgttggtgaaagttctttcattctttgaatcaatccatcaatcatcaatggcggaagagaag |
40651368 |
T |
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| Q |
129 |
aaactgaatcacgaagaagaggcaaatcctcttctcaaacaacaaccacctcaacaacctccaaaagctgaacaaacaaccgagcagcaggatcattatc |
228 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
40651369 |
aaactgaatcacgaacaagaggcaaatcctcttctcaaacaacaaccacctcaacaacctccaaaagctgaacaaacaaccgagcagcaggatcgttatc |
40651468 |
T |
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| Q |
229 |
ttggatggactgccgatgggcttccgatgagccatggaagcgtcatgggtcagcccattcctcgttctccttggaattcctccgcct |
315 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40651469 |
ttggatggactgccgatgggcttccgattagccatggaagcgtcatgggtcagcccattcctcgttctccttggaattcctccgcct |
40651555 |
T |
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