View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13591_low_7 (Length: 406)
Name: NF13591_low_7
Description: NF13591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13591_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 346; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 17 - 386
Target Start/End: Original strand, 21838536 - 21838905
Alignment:
| Q |
17 |
aaaagctccattgagccatctattttaatacttttcattgaattttaaatataaagctacaaattttaacttagaagagtgatatgaacatatgtaatat |
116 |
Q |
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| T |
21838536 |
aaaagctccattgagccatctattttaatacttttcattgaattttaaatataaagctacaaattttaacttagaagagtgatatgaacatatgtaatat |
21838635 |
T |
|
| Q |
117 |
ctaggaaatgttgagagataggattgtaaaaatttccatatttttcatcagaactctagctgccaaagaaaatacaaaaccgagtttatgcatatttgat |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
21838636 |
ctaggaaatgttgagagataggattgtaaaaatttccatattttttatcagaactctagctgccaaaggaaatacaaaaccgagtttatgcatatttgat |
21838735 |
T |
|
| Q |
217 |
tttaaccgttcaatttcaaattaacagtcgaaatcgtgtagcaacatgatttttcttacaagtgaaaccccggtttaccctgcattattgctcttagagt |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
21838736 |
tttaaccgttcaatttcaaattaacagtcgaaatcgtgtaacagcatgatttttcttacaagtgaaaccccggtttaccctgcattattgttcttagagt |
21838835 |
T |
|
| Q |
317 |
ctgctcaaatgcacttatacctactgaccacatgtagtctattcgcatataattggtttcctcagtattg |
386 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
21838836 |
ctgctcaaatgcacttatacctactgaccacatgtagtctattcgcatataattgttttcctcagtattg |
21838905 |
T |
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