View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13592_low_6 (Length: 281)
Name: NF13592_low_6
Description: NF13592
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13592_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 50055207 - 50055469
Alignment:
| Q |
1 |
tccagggacacttttggctatcccatgcaatgattactgcatcataatctagctgcaaagatatttttcttttccccttattataatcattattttcatt |
100 |
Q |
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| T |
50055207 |
tccagggacacttctggctatcccatgcaatgattactgcatcataatctagctgcaaagatatttttcttttccccttattataatcattattttcatt |
50055306 |
T |
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| Q |
101 |
ttgttctccacacttctccttcacctcttcacatgtttcatgagaatcatcataatcaaaattcaactcaaatgaagattcttttccaatctccatcata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50055307 |
ttgttctccacacttctccttcacctcttcacatgtttcatgagaatcatcataatcaaaattcaactcaaatgaagattcttttccaatctccatcata |
50055406 |
T |
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| Q |
201 |
ttatctccctcaacaagttcataacactcttcaccttcttccttcacctttccaccacacttc |
263 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50055407 |
ttatctccctcaacaacttcataacactcttcaccttcttccttcacctttccaccacacttc |
50055469 |
T |
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