View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13594_low_8 (Length: 261)

Name: NF13594_low_8
Description: NF13594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13594_low_8
NF13594_low_8
[»] chr8 (51 HSPs)
chr8 (1-255)||(21395817-21396071)
chr8 (1-255)||(21790310-21790564)
chr8 (1-255)||(21389287-21389541)
chr8 (1-171)||(21778697-21778867)
chr8 (1-184)||(16199551-16199735)
chr8 (1-184)||(31971287-31971471)
chr8 (1-184)||(45130903-45131087)
chr8 (1-184)||(22626766-22626951)
chr8 (1-176)||(18879150-18879322)
chr8 (1-184)||(20536238-20536424)
chr8 (1-174)||(21918915-21919091)
chr8 (1-184)||(18818314-18818500)
chr8 (1-184)||(28648949-28649135)
chr8 (132-223)||(17353804-17353894)
chr8 (1-184)||(21923833-21924019)
chr8 (1-152)||(16092279-16092433)
chr8 (1-184)||(22875095-22875281)
chr8 (1-184)||(7372808-7372986)
chr8 (107-243)||(23776682-23776818)
chr8 (119-243)||(16184877-16185000)
chr8 (1-184)||(23406409-23406597)
chr8 (132-243)||(19899257-19899367)
chr8 (1-184)||(6759288-6759472)
chr8 (44-184)||(23648628-23648769)
chr8 (162-243)||(24755912-24755993)
chr8 (132-243)||(19983255-19983365)
chr8 (1-84)||(17140946-17141031)
chr8 (1-87)||(6520398-6520486)
chr8 (109-243)||(21168568-21168703)
chr8 (162-221)||(377469-377528)
chr8 (1-43)||(5866323-5866365)
chr8 (1-88)||(21285627-21285716)
chr8 (1-43)||(21491025-21491067)
chr8 (1-43)||(23760893-23760935)
chr8 (1-43)||(38855300-38855342)
chr8 (162-219)||(17926578-17926635)
chr8 (162-218)||(20465911-20465967)
chr8 (132-223)||(21161925-21162015)
chr8 (1-43)||(983455-983497)
chr8 (163-221)||(19259451-19259509)
chr8 (109-182)||(25363047-25363121)
chr8 (1-44)||(19154935-19154978)
chr8 (1-88)||(20498592-20498681)
chr8 (1-43)||(26355747-26355789)
chr8 (1-67)||(13508108-13508176)
chr8 (162-219)||(15602888-15602945)
chr8 (162-219)||(15611340-15611397)
chr8 (1-42)||(24353050-24353091)
chr8 (1-42)||(37116377-37116418)
chr8 (1-84)||(14409495-14409579)
chr8 (1-84)||(16413367-16413451)
[»] chr2 (34 HSPs)
chr2 (1-176)||(20309138-20309313)
chr2 (57-239)||(40622059-40622244)
chr2 (1-184)||(38021-38205)
chr2 (1-189)||(23285895-23286082)
chr2 (1-223)||(23103263-23103486)
chr2 (1-184)||(22731139-22731325)
chr2 (1-184)||(23060543-23060728)
chr2 (1-184)||(23076472-23076658)
chr2 (1-189)||(298714-298906)
chr2 (1-184)||(22738085-22738270)
chr2 (1-189)||(23654286-23654477)
chr2 (109-243)||(22740807-22740942)
chr2 (109-243)||(22758562-22758697)
chr2 (44-243)||(22798973-22799172)
chr2 (163-243)||(23038227-23038307)
chr2 (1-184)||(22337145-22337331)
chr2 (9-210)||(23660061-23660264)
chr2 (44-219)||(23019577-23019752)
chr2 (1-88)||(7735-7824)
chr2 (1-43)||(7679615-7679657)
chr2 (1-43)||(25175880-25175922)
chr2 (162-219)||(25963588-25963645)
chr2 (1-84)||(22105439-22105524)
chr2 (1-43)||(28406006-28406048)
chr2 (162-219)||(21918187-21918244)
chr2 (167-243)||(45678002-45678078)
chr2 (1-44)||(23207307-23207350)
chr2 (1-43)||(19671860-19671902)
chr2 (1-43)||(23071998-23072040)
chr2 (5-88)||(23708621-23708706)
chr2 (162-219)||(22811782-22811839)
chr2 (162-219)||(37524856-37524912)
chr2 (1-84)||(26505406-26505490)
chr2 (1-84)||(26507884-26507968)
[»] scaffold0351 (1 HSPs)
scaffold0351 (1-176)||(16312-16487)
[»] chr4 (42 HSPs)
chr4 (1-184)||(17046517-17046700)
chr4 (57-230)||(15121663-15121834)
chr4 (1-184)||(14053207-14053392)
chr4 (1-189)||(12902787-12902978)
chr4 (1-189)||(7088907-7089098)
chr4 (1-184)||(22636465-22636650)
chr4 (1-184)||(44052859-44053045)
chr4 (1-176)||(16270149-16270326)
chr4 (1-184)||(16377428-16377612)
chr4 (1-184)||(16239875-16240060)
chr4 (1-152)||(7798804-7798958)
chr4 (1-189)||(23374259-23374450)
chr4 (1-183)||(14038678-14038863)
chr4 (107-243)||(15093909-15094045)
chr4 (132-242)||(13569674-13569783)
chr4 (123-243)||(23843631-23843750)
chr4 (162-243)||(12570212-12570293)
chr4 (1-140)||(6899921-6900062)
chr4 (1-184)||(7893733-7893916)
chr4 (132-243)||(44675794-44675904)
chr4 (1-88)||(13853-13942)
chr4 (1-88)||(14280343-14280431)
chr4 (1-43)||(12288259-12288301)
chr4 (1-43)||(12774037-12774079)
chr4 (1-43)||(15551847-15551889)
chr4 (24-89)||(43256161-43256227)
chr4 (1-43)||(52243245-52243287)
chr4 (1-90)||(52873367-52873458)
chr4 (1-52)||(3096323-3096373)
chr4 (1-43)||(39706337-39706379)
chr4 (6-43)||(8846391-8846428)
chr4 (162-219)||(16356824-16356881)
chr4 (1-34)||(43198613-43198646)
chr4 (163-219)||(16348536-16348592)
chr4 (1-88)||(54798756-54798845)
chr4 (101-184)||(3096776-3096859)
chr4 (132-246)||(15124998-15125110)
chr4 (163-221)||(16487947-16488005)
chr4 (109-172)||(17047989-17048053)
chr4 (1-84)||(18215325-18215409)
chr4 (1-84)||(19618223-19618307)
chr4 (1-88)||(44928926-44929015)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-176)||(1319-1494)
scaffold0106 (1-176)||(7296-7471)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-176)||(51612-51787)
[»] chr7 (42 HSPs)
chr7 (1-176)||(27847746-27847921)
chr7 (4-184)||(40443424-40443605)
chr7 (69-221)||(17137932-17138083)
chr7 (69-223)||(12187113-12187266)
chr7 (1-184)||(12698861-12699048)
chr7 (1-183)||(18456319-18456503)
chr7 (1-184)||(9509219-9509405)
chr7 (1-184)||(10589069-10589254)
chr7 (1-189)||(16386147-16386339)
chr7 (9-189)||(26212034-26212217)
chr7 (109-253)||(18154673-18154818)
chr7 (1-184)||(38227511-38227696)
chr7 (132-242)||(9703429-9703538)
chr7 (1-152)||(3564301-3564455)
chr7 (119-223)||(24054618-24054721)
chr7 (174-246)||(11880456-11880528)
chr7 (164-243)||(19649331-19649410)
chr7 (1-43)||(67775-67817)
chr7 (1-43)||(28505347-28505389)
chr7 (1-43)||(34200816-34200858)
chr7 (3-88)||(48273421-48273508)
chr7 (1-84)||(13647355-13647440)
chr7 (1-90)||(16219717-16219808)
chr7 (1-43)||(811180-811222)
chr7 (1-88)||(2280121-2280210)
chr7 (24-89)||(2530139-2530205)
chr7 (3-88)||(16056360-16056446)
chr7 (1-90)||(16213711-16213801)
chr7 (1-43)||(16495432-16495474)
chr7 (1-43)||(18005676-18005718)
chr7 (1-43)||(44014208-44014250)
chr7 (166-243)||(12321589-12321666)
chr7 (1-43)||(12255842-12255884)
chr7 (1-47)||(12901353-12901399)
chr7 (1-84)||(17061966-17062050)
chr7 (1-43)||(47831837-47831879)
chr7 (1-42)||(14036284-14036325)
chr7 (1-42)||(14346314-14346355)
chr7 (162-219)||(14430070-14430127)
chr7 (2-39)||(22072944-22072981)
chr7 (1-84)||(24275198-24275282)
chr7 (1-84)||(44116536-44116620)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-176)||(965-1140)
[»] chr6 (40 HSPs)
chr6 (1-176)||(16920546-16920721)
chr6 (1-176)||(22831533-22831710)
chr6 (1-177)||(11185535-11185711)
chr6 (1-143)||(35245616-35245758)
chr6 (1-184)||(20360865-20361051)
chr6 (1-184)||(20638188-20638374)
chr6 (1-183)||(29060570-29060755)
chr6 (1-184)||(19303446-19303631)
chr6 (162-223)||(19863171-19863232)
chr6 (162-223)||(19873313-19873374)
chr6 (109-243)||(25642030-25642165)
chr6 (119-223)||(22438951-22439054)
chr6 (1-182)||(20593803-20593987)
chr6 (1-184)||(17287701-17287887)
chr6 (1-184)||(18409732-18409918)
chr6 (162-223)||(22432443-22432504)
chr6 (1-176)||(22780140-22780318)
chr6 (1-184)||(25629260-25629446)
chr6 (1-90)||(16496274-16496365)
chr6 (1-129)||(20076730-20076857)
chr6 (162-243)||(15894276-15894357)
chr6 (162-243)||(22334738-22334819)
chr6 (1-88)||(20109168-20109257)
chr6 (1-43)||(27333267-27333309)
chr6 (1-43)||(27394007-27394049)
chr6 (162-243)||(21739869-21739950)
chr6 (1-84)||(1595576-1595660)
chr6 (1-88)||(25644350-25644440)
chr6 (44-239)||(15041401-15041596)
chr6 (1-43)||(9098563-9098605)
chr6 (193-243)||(31164694-31164744)
chr6 (162-243)||(18907299-18907380)
chr6 (24-143)||(27415887-27416008)
chr6 (3-88)||(23019438-23019525)
chr6 (1-71)||(25656656-25656727)
chr6 (1-43)||(19652225-19652267)
chr6 (1-43)||(28496520-28496562)
chr6 (1-43)||(29808931-29808973)
chr6 (1-34)||(19668401-19668434)
chr6 (1-84)||(22782254-22782338)
[»] chr1 (38 HSPs)
chr1 (1-176)||(38801304-38801479)
chr1 (1-189)||(27250629-27250820)
chr1 (1-184)||(50210118-50210304)
chr1 (109-255)||(21714687-21714834)
chr1 (1-189)||(21026710-21026901)
chr1 (1-184)||(34509810-34509996)
chr1 (46-184)||(22354477-22354616)
chr1 (109-223)||(48603654-48603769)
chr1 (107-243)||(21787889-21788025)
chr1 (162-243)||(20091320-20091401)
chr1 (1-246)||(22468540-22468787)
chr1 (44-184)||(20135262-20135403)
chr1 (1-172)||(22532299-22532473)
chr1 (162-243)||(42865058-42865139)
chr1 (162-243)||(22831225-22831306)
chr1 (163-221)||(21022830-21022888)
chr1 (1-88)||(21896258-21896347)
chr1 (162-243)||(6152046-6152127)
chr1 (24-143)||(33797573-33797694)
chr1 (1-71)||(20847173-20847245)
chr1 (1-43)||(14295600-14295642)
chr1 (1-43)||(16758679-16758721)
chr1 (1-43)||(20918634-20918676)
chr1 (1-43)||(21754075-21754117)
chr1 (1-88)||(21861572-21861661)
chr1 (162-220)||(22449136-22449194)
chr1 (1-43)||(22921918-22921960)
chr1 (1-43)||(33681037-33681079)
chr1 (1-84)||(45574893-45574978)
chr1 (1-88)||(22237657-22237746)
chr1 (1-43)||(35261127-35261169)
chr1 (1-43)||(52928019-52928061)
chr1 (1-42)||(50614167-50614208)
chr1 (1-42)||(50621995-50622036)
chr1 (1-84)||(21840794-21840878)
chr1 (1-33)||(22123171-22123203)
chr1 (102-184)||(22356079-22356163)
chr1 (102-184)||(22357765-22357849)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-184)||(5036-5219)
[»] scaffold0215 (1 HSPs)
scaffold0215 (57-232)||(26911-27084)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-255)||(174796-175051)
scaffold0021 (63-184)||(124679-124801)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-184)||(32097-32280)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-184)||(10331-10514)
[»] scaffold0427 (1 HSPs)
scaffold0427 (1-184)||(13527-13711)
[»] scaffold0114 (2 HSPs)
scaffold0114 (1-184)||(15370-15554)
scaffold0114 (57-221)||(7378-7540)
[»] chr5 (41 HSPs)
chr5 (69-223)||(22032415-22032568)
chr5 (69-221)||(18769873-18770024)
chr5 (1-243)||(37723933-37724176)
chr5 (69-221)||(23572178-23572329)
chr5 (1-224)||(21292835-21293060)
chr5 (1-184)||(23390401-23390587)
chr5 (1-184)||(25421562-25421748)
chr5 (1-184)||(25431424-25431610)
chr5 (1-189)||(8286742-8286934)
chr5 (1-184)||(24493599-24493784)
chr5 (1-189)||(22075049-22075240)
chr5 (1-176)||(24529250-24529428)
chr5 (2-184)||(9077983-9078168)
chr5 (107-243)||(21873385-21873521)
chr5 (162-223)||(23501212-23501273)
chr5 (1-184)||(13025341-13025526)
chr5 (1-184)||(13095525-13095710)
chr5 (162-243)||(26704257-26704338)
chr5 (162-243)||(26973990-26974071)
chr5 (162-243)||(23201559-23201641)
chr5 (1-184)||(1096497-1096683)
chr5 (1-90)||(21729064-21729155)
chr5 (1-90)||(21808389-21808480)
chr5 (163-243)||(14079340-14079420)
chr5 (1-71)||(21997553-21997625)
chr5 (1-87)||(20026942-20027032)
chr5 (1-87)||(21329500-21329588)
chr5 (1-43)||(19660884-19660926)
chr5 (1-43)||(22959581-22959623)
chr5 (24-143)||(18356367-18356488)
chr5 (1-86)||(21565572-21565659)
chr5 (1-43)||(36314607-36314649)
chr5 (1-71)||(26012054-26012126)
chr5 (132-183)||(22412337-22412388)
chr5 (24-89)||(20910800-20910866)
chr5 (1-43)||(21502205-21502247)
chr5 (1-88)||(22144079-22144168)
chr5 (1-88)||(22412214-22412302)
chr5 (165-243)||(23512301-23512379)
chr5 (162-219)||(21366537-21366594)
chr5 (109-189)||(22107273-22107354)
[»] scaffold0029 (1 HSPs)
scaffold0029 (69-221)||(12857-13008)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-176)||(47025-47200)
[»] scaffold1124 (1 HSPs)
scaffold1124 (69-221)||(1975-2126)
[»] scaffold0210 (2 HSPs)
scaffold0210 (69-221)||(21675-21826)
scaffold0210 (69-221)||(29567-29718)
[»] chr3 (53 HSPs)
chr3 (1-221)||(856166-856385)
chr3 (1-184)||(20698341-20698526)
chr3 (1-184)||(13442304-13442490)
chr3 (1-184)||(17487886-17488072)
chr3 (1-184)||(14972884-14973070)
chr3 (1-184)||(17499368-17499554)
chr3 (9-184)||(14576738-14576915)
chr3 (1-189)||(12399239-12399430)
chr3 (109-223)||(14179572-14179687)
chr3 (1-183)||(24153115-24153299)
chr3 (1-184)||(26686917-26687103)
chr3 (1-184)||(43840962-43841148)
chr3 (1-176)||(18438564-18438742)
chr3 (1-184)||(23083266-23083452)
chr3 (132-243)||(17524999-17525109)
chr3 (132-243)||(23077325-23077435)
chr3 (1-184)||(14572619-14572804)
chr3 (1-150)||(42386440-42386592)
chr3 (1-184)||(11424668-11424850)
chr3 (1-184)||(25476290-25476476)
chr3 (1-184)||(40213626-40213811)
chr3 (119-243)||(23408581-23408704)
chr3 (1-43)||(12174308-12174350)
chr3 (1-88)||(15470954-15471043)
chr3 (1-43)||(32307707-32307749)
chr3 (1-43)||(49668125-49668167)
chr3 (1-87)||(14234517-14234605)
chr3 (131-243)||(14878352-14878464)
chr3 (191-242)||(15877676-15877727)
chr3 (1-43)||(9512950-9512992)
chr3 (1-43)||(9520925-9520967)
chr3 (1-43)||(13210376-13210418)
chr3 (163-221)||(16909941-16909999)
chr3 (1-88)||(27165277-27165366)
chr3 (1-43)||(52523778-52523820)
chr3 (162-219)||(12496445-12496502)
chr3 (1-34)||(28194720-28194753)
chr3 (163-243)||(15051707-15051787)
chr3 (163-243)||(15060483-15060563)
chr3 (1-44)||(37251216-37251259)
chr3 (1-39)||(16097358-16097396)
chr3 (1-43)||(16103810-16103852)
chr3 (1-88)||(36166625-36166712)
chr3 (9-80)||(53301561-53301634)
chr3 (162-219)||(11862981-11863038)
chr3 (1-42)||(22110402-22110443)
chr3 (1-67)||(24340746-24340814)
chr3 (1-42)||(43925988-43926029)
chr3 (1-84)||(9707658-9707742)
chr3 (1-84)||(17672653-17672737)
chr3 (1-84)||(29172634-29172718)
chr3 (1-84)||(43550529-43550614)
chr3 (1-84)||(53070704-53070788)
[»] scaffold0358 (2 HSPs)
scaffold0358 (1-176)||(4742-4919)
scaffold0358 (46-176)||(13-143)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-184)||(13241-13427)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-184)||(1881-2067)
[»] scaffold1842 (1 HSPs)
scaffold1842 (1-189)||(949-1139)
[»] scaffold0292 (2 HSPs)
scaffold0292 (1-184)||(3500-3686)
scaffold0292 (1-184)||(373-558)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-189)||(167879-168069)
scaffold0011 (1-184)||(51943-52129)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-184)||(24206-24394)
scaffold0042 (162-230)||(34770-34838)
[»] scaffold0540 (1 HSPs)
scaffold0540 (1-184)||(3056-3241)
[»] scaffold0145 (2 HSPs)
scaffold0145 (1-184)||(38791-38976)
scaffold0145 (1-176)||(32972-33149)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-176)||(4879-5057)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-184)||(17120-17308)
scaffold0056 (162-223)||(13944-14005)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-184)||(6026-6215)
[»] scaffold0088 (1 HSPs)
scaffold0088 (7-189)||(20946-21132)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-184)||(339855-340038)
scaffold0003 (24-143)||(71353-71474)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-184)||(39507-39692)
[»] scaffold0101 (1 HSPs)
scaffold0101 (132-223)||(8824-8914)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-184)||(75120-75305)
[»] scaffold0043 (1 HSPs)
scaffold0043 (132-246)||(18402-18515)
[»] scaffold0131 (1 HSPs)
scaffold0131 (109-243)||(36595-36730)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-184)||(25970-26156)
scaffold0122 (1-88)||(44709-44798)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-184)||(25926-26111)
scaffold0026 (1-184)||(39888-40073)
[»] scaffold0139 (2 HSPs)
scaffold0139 (109-252)||(20120-20264)
scaffold0139 (1-44)||(38346-38389)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-184)||(8438-8620)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-172)||(3103-3277)
[»] scaffold0490 (1 HSPs)
scaffold0490 (1-176)||(1982-2160)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-176)||(22913-23090)
[»] scaffold0004 (1 HSPs)
scaffold0004 (162-243)||(69987-70068)
[»] scaffold0198 (1 HSPs)
scaffold0198 (121-221)||(23995-24094)
[»] scaffold0023 (6 HSPs)
scaffold0023 (44-243)||(38326-38525)
scaffold0023 (45-219)||(23538-23711)
scaffold0023 (1-88)||(100404-100493)
scaffold0023 (1-43)||(119905-119947)
scaffold0023 (1-42)||(40224-40265)
scaffold0023 (1-43)||(101529-101571)
[»] scaffold0297 (1 HSPs)
scaffold0297 (132-223)||(15536-15626)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-184)||(39943-40128)
scaffold0080 (162-221)||(18525-18584)
[»] scaffold0175 (2 HSPs)
scaffold0175 (21-189)||(13141-13313)
scaffold0175 (1-48)||(34153-34200)
[»] scaffold0096 (1 HSPs)
scaffold0096 (107-243)||(16196-16332)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-149)||(32898-33047)
scaffold0120 (1-149)||(45958-46107)
scaffold0120 (1-52)||(16143-16193)
[»] scaffold0228 (3 HSPs)
scaffold0228 (8-184)||(4544-4723)
scaffold0228 (8-184)||(12126-12305)
scaffold0228 (8-184)||(22078-22257)
[»] scaffold0555 (2 HSPs)
scaffold0555 (162-243)||(773-854)
scaffold0555 (3-88)||(10543-10630)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-184)||(16505-16691)
[»] scaffold0102 (2 HSPs)
scaffold0102 (162-223)||(48327-48388)
scaffold0102 (1-43)||(19294-19336)
[»] scaffold0081 (3 HSPs)
scaffold0081 (109-250)||(14809-14951)
scaffold0081 (109-250)||(23824-23966)
scaffold0081 (109-250)||(39248-39390)
[»] scaffold0149 (2 HSPs)
scaffold0149 (132-223)||(3904-3994)
scaffold0149 (132-223)||(8335-8425)
[»] scaffold0046 (3 HSPs)
scaffold0046 (1-91)||(28444-28536)
scaffold0046 (1-43)||(11322-11364)
scaffold0046 (1-43)||(2027-2069)
[»] scaffold0235 (1 HSPs)
scaffold0235 (1-86)||(11447-11534)
[»] scaffold0031 (2 HSPs)
scaffold0031 (167-241)||(65642-65716)
scaffold0031 (46-116)||(128827-128897)
[»] scaffold0261 (2 HSPs)
scaffold0261 (162-243)||(1531-1612)
scaffold0261 (4-47)||(15694-15737)
[»] scaffold0309 (1 HSPs)
scaffold0309 (31-176)||(6669-6818)
[»] scaffold0174 (1 HSPs)
scaffold0174 (132-243)||(18300-18410)
[»] scaffold2014 (1 HSPs)
scaffold2014 (1-88)||(1062-1151)
[»] scaffold1895 (1 HSPs)
scaffold1895 (121-243)||(1074-1195)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-88)||(8496-8585)
scaffold0621 (1-43)||(6565-6607)
[»] scaffold0130 (1 HSPs)
scaffold0130 (51-184)||(27912-28046)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-88)||(53551-53640)
[»] scaffold0671 (1 HSPs)
scaffold0671 (131-243)||(6264-6375)
[»] scaffold0035 (1 HSPs)
scaffold0035 (162-221)||(46596-46655)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-88)||(2808-2897)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-88)||(38704-38793)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-153)||(4554-4709)
[»] scaffold0311 (1 HSPs)
scaffold0311 (162-243)||(6925-7006)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-184)||(8509-8691)
[»] scaffold0327 (1 HSPs)
scaffold0327 (46-184)||(3434-3574)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-43)||(1112-1154)
[»] scaffold1296 (1 HSPs)
scaffold1296 (163-221)||(582-640)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-43)||(6842-6884)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-88)||(12598-12687)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-43)||(6641-6683)
scaffold0333 (1-43)||(14021-14063)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-43)||(5673-5715)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-43)||(6172-6214)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-47)||(8119-8165)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-43)||(2694-2736)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-43)||(1118-1160)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-43)||(23932-23974)
[»] scaffold0093 (1 HSPs)
scaffold0093 (132-205)||(4690-4761)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-88)||(22672-22761)
scaffold0037 (162-221)||(21438-21497)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-76)||(32566-32643)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-43)||(62228-62270)
scaffold0028 (1-34)||(132688-132721)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-43)||(15826-15868)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-47)||(60761-60807)
scaffold0010 (1-88)||(129935-130024)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-43)||(160714-160756)
[»] scaffold0124 (2 HSPs)
scaffold0124 (162-223)||(42810-42871)
scaffold0124 (1-43)||(38305-38347)
[»] scaffold0107 (1 HSPs)
scaffold0107 (24-143)||(15362-15483)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-42)||(14747-14788)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-84)||(4721-4805)
[»] scaffold0079 (1 HSPs)
scaffold0079 (163-219)||(44269-44325)
[»] scaffold0676 (1 HSPs)
scaffold0676 (166-209)||(4622-4665)
[»] scaffold0550 (1 HSPs)
scaffold0550 (165-220)||(7662-7717)
[»] scaffold0280 (1 HSPs)
scaffold0280 (162-209)||(19173-19220)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-44)||(25136-25179)
[»] scaffold0111 (1 HSPs)
scaffold0111 (132-243)||(32597-32706)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-43)||(159-201)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-43)||(1083-1125)
[»] scaffold0484 (1 HSPs)
scaffold0484 (109-182)||(1054-1128)
[»] scaffold0461 (1 HSPs)
scaffold0461 (1-43)||(11494-11536)
[»] scaffold0357 (1 HSPs)
scaffold0357 (1-88)||(13158-13247)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-43)||(45841-45883)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-88)||(10557-10646)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-87)||(12796-12884)
[»] scaffold0393 (1 HSPs)
scaffold0393 (162-219)||(1681-1738)
[»] scaffold0220 (1 HSPs)
scaffold0220 (118-219)||(4804-4904)
[»] scaffold0158 (2 HSPs)
scaffold0158 (162-219)||(3030-3087)
scaffold0158 (162-219)||(6696-6753)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-87)||(12969-13057)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-42)||(129021-129061)
[»] scaffold0483 (1 HSPs)
scaffold0483 (165-209)||(511-555)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-84)||(10800-10884)
[»] scaffold0109 (1 HSPs)
scaffold0109 (165-209)||(45298-45342)
[»] scaffold0084 (1 HSPs)
scaffold0084 (132-176)||(10327-10371)


Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 21396071 - 21395817
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||     
T  21396071 tcatgcagcttagttaaataacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaa 21395972  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctc 200  Q
     |||||| |||||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21395971 cattcttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctc 21395872  T
Q  201 attactacccaagggtccatctccaaacaaaacatgcgacacatattgcattttc 255  Q
    ||||||||||||||||||||||| || |||| ||||||||||| || ||||||||    
T  21395871 attactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttc 21395817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 21790564 - 21790310
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||     
T  21790564 tcatgcagcttagttaaataacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaa 21790465  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctc 200  Q
     |||||| |||||||||||||||||||||| || |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21790464 cattcttcaagtaatgcataaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctc 21790365  T
Q  201 attactacccaagggtccatctccaaacaaaacatgcgacacatattgcattttc 255  Q
    ||||||||||||||||||||||| || |||| ||||||||||| || ||||||||    
T  21790364 attactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttc 21790310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 21389541 - 21389287
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  21389541 tcatgcagcttagttaaataacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 21389442  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctc 200  Q
     |||||| |||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  21389441 cattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacatattacaattaacttcatatattggtctc 21389342  T
Q  201 attactacccaagggtccatctccaaacaaaacatgcgacacatattgcattttc 255  Q
    ||||||||||||||||||||||| || |||| ||||||||||| || ||||||||    
T  21389341 attactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttc 21389287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 21778867 - 21778697
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  21778867 tcatgcagcttagttaaataacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 21778768  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcaca 171  Q
     |||||| |||||||||||||||||||||| || |||||||||||| |||||| |||||||||||||||||    
T  21778767 cattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 16199735 - 16199551
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaa 99  Q
    |||||||||||||||||||||||||||||||||| | |||||| ||| |||||||||||||| ||||||| ||||||||||| |||||||| ||||||||    
T  16199735 tcatgcagcttagttaaataacaaacagcaacatagacagtattcaaacaacatgacataataatatcaatttcaattcatctacatcttaggtatacaa 16199636  T
Q  100 ttattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     ||||||| ||||||||||||||||||||| |||||||||||||||| |||||| |||||| ||||||||||||||| |||||||    
T  16199635 atattcttcaagtaatgcataaacattatattacatcataatcaacaacaacatatcttatacagcttcacagattataattaac 16199551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 31971287 - 31971471
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||  |||||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  31971287 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaattccaattcatcaacatcttatgtataca 31971385  T
Q  99 attattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | ||||||| |||||||||||||||||||||  ||||||||||||||| |||||| |||||| || |||||||||||| |||||||    
T  31971386 aatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacatcttcacagattataattaac 31971471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 45131087 - 45130903
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaa-ttcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||| || ||||||||||| ||||||| ||||| ||||||||||||||| |||||||    
T  45131087 tcatgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacagcatgacataataatatcaatttcaaattcatcaacatcttaggtataca 45130989  T
Q  99 attattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||||||| |||||||||||||||||||||  |||||||||||| || |||||  |||||| ||||||||||||||| |||||||    
T  45130988 attattcttcaagtaatgcataaacattatatcacatcataatcatcaacaacaaatcttatacagcttcacagattataattaac 45130903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 22626766 - 22626951
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||  ||| ||    
T  22626766 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatacaaatcaacaacatcttaaatattca 22626864  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| ||||||||  || |||||||||  ||||||| |||| ||||||||  |||||  ||||||||||||||| |||||||    
T  22626865 attatacttcaagtaatgtgtataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattataattaac 22626951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18879322 - 18879150
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||  ||||||| ||||||| | ||||||||||||||||||  ||| |||     
T  18879322 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaca--acataataatatcaattgcaattcatcaacatcttaaatattcaaa 18879226  T
Q  101 tattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    ||||||| |||||||||  | |||||||||  |||||||||||||||||| ||  ||||| ||||||||||||||||    
T  18879225 tattcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatctta-tcagcttcacagatta 18879150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 20536238 - 20536424
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||| ||||| |||||||||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  20536238 tcatgcagcttagttaaataacaa-cagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 20536336  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||| | |||||||||  ||||||||||| |||||||||  |||||  || |||||||||||| |||||||    
T  20536337 aaatattcttcaagtaatgcacataacattatatcacatcataatcgacatcaacacatcttaaacaacttcacagattataattaac 20536424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 21919091 - 21918915
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||   ||||||||| ||||||| | ||||||| ||||||||||  ||| |    
T  21919091 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc 21918993  T
Q  98 aatta-ttctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagat 174  Q
    || || ||||| |||||||||||||||||||||  |||||||||||| || |||||  |||||  |||||||||||||    
T  21918992 aaataattcttcaagtaatgcataaacattatatcacatcataatcagcagcaacacatcttaaacagcttcacagat 21918915  T

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Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 18818500 - 18818314
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||   ||||||||| ||||||| |  || ||| || |||||||  ||| |    
T  18818500 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtcaacatcatcttaaatattc 18818402  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| ||| |||||||||| | |||||||||  ||| |||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  18818401 aattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaac 18818314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 28649135 - 28648949
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||||||||  |||||    
T  28649135 tcatgcagcttagttaaataacaaa-agcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaattatac 28649037  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||  || ||||||||  || |||||||||  |||||||||||||||||||||  |||||  |||||||||| |||| |||||||    
T  28649036 attcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaac 28648949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 17353894 - 17353804
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||||||| ||||||| ||||| || ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17353894 acatcatattcaacataaacatttcataa-cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 17353804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 21924019 - 21923833
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||||   ||||||||||| || ||||||| | ||| ||| ||||||||||  ||| |    
T  21924019 tcatgcagcttagttaaataacaa-cagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtcaacaacatcttaaatattc 21923921  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| ||| |||||||||| | ||| ||||  | |||||||||||||| |||||  |||||  ||||||||||||||| |||||||    
T  21923920 aattatacttcaagtaatgcacataaccttattttgcatcataatcaacaacaacacatcttaaacagcttcacagattataattaac 21923833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 16092433 - 16092279
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||| ||||   ||||||||| ||||||||| ||| ||| |||||||| |  |||||    
T  16092433 tcatgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatac 16092335  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaaca 152  Q
    | | ||  |||||||||||| || |||||||||  |||||||||||||||||||||    
T  16092334 attcataatttaagtaatgcgtataacattatatcacatcataatcaacatcaaca 16092279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 22875095 - 22875281
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||| ||  ||||||||  ||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| |  ||||||    
T  22875095 tcatgcagcttagttaaatagcag-cagcaacacaggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 22875193  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtctt-attcagcttcacagattacaattaac 184  Q
     | ||  || ||||||||| || |||||||||  |||||||||||||||||||||  |||| |  ||||||||||||||| |||||||    
T  22875194 ttcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaac 22875281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 7372808 - 7372986
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||   |||| ||||||||||| ||||||| | ||| ||| || |||||||  ||| |    
T  7372808 tcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 7372906  T
Q  98 aattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| ||| |||||||||       |||||  ||| |||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  7372907 aattatacttcaagtaatgc-------ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaac 7372986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 23776818 - 23776682
Alignment:
Q  107 ttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattac 205  Q
    |||||||||||| | |||||||||  |||||||| ||||||||||||| || ||  |||||||||| ||| || ||||||||||||||||||| ||||||    
T  23776818 ttaagtaatgcacataacattatataacatcatattcaacatcaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattac 23776720  T
Q  206 tacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||| ||| ||||||||| || ||||  ||||||||||    
T  23776719 tacctaagtgtccatctctaaccaaattatgcgacaca 23776682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 16184877 - 16185000
Alignment:
Q  119 taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcc 218  Q
    ||||||||| |  |||| ||||||||||| ||||| || ||| |||||||||||||| || ||||| ||||||||||||| |||||||||||| ||||||    
T  16184877 taaacattaaatcacattataatcaacattaacatctcatat-cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtcc 16184975  T
Q  219 atctccaaacaaaacatgcgacaca 243  Q
    ||||| || ||||  ||||||||||    
T  16184976 atctctaatcaaattatgcgacaca 16185000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 23406409 - 23406597
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatc--aacatcttatgtat 95  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||   |||||||||||||||| ||||||| | ||| ||| |  | |||||||  |||    
T  23406409 tcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacatatcatcttaaatat 23406507  T
Q  96 acaattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     ||||||| ||| |||||||||| | |||||||||  ||| |||| ||||||||||||  |||||  || ||||||| |||| |||||||    
T  23406508 tcaattatacttcaagtaatgcacataacattatatcacaacatagtcaacatcaacacatcttaaacaacttcacatattataattaac 23406597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 19899257 - 19899367
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaa 231  Q
    |||||||| ||||||| ||||| || ||  |||||||||||||| || ||||||||||| ||||||| |||||||||||||||||||||||| || ||||    
T  19899257 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttaaataggtcacattactacccaagggtccatctctaatcaaa 19899355  T
Q  232 acatgcgacaca 243  Q
      ||||||||||    
T  19899356 ttatgcgacaca 19899367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 6759288 - 6759472
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||   |||||||||||||||| ||||||||| |||    ||||||||| |  |||||    
T  6759288 tcatgcagcttagttaaataac-aacagcaacacaggcagtatacaaaaacaacatgacataataatatcaaatgcaa---gtcaacatctcaattatac 6759383  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtctt-attcagcttcacagattacaattaac 184  Q
    | | ||  || || |||||| || |||||||||  |||||||||||||||||||||  |||| |  ||||||||||||||| |||||||    
T  6759384 actcataattcaattaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaac 6759472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 23648628 - 23648769
Alignment:
Q  44 acaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcata-aacattataatacatcataatc 142  Q
    |||||||||||||||||| ||||||  | |||| || ||||||||||  ||| |||| |  ||| |||||||||| | |||||||||  |||||||||||    
T  23648628 acaacaacatgacataataatatcatttgcaatacaacaacatcttaaatattcaataaaacttcaagtaatgcacacaacattatatcacatcataatc 23648727  T
Q  143 aacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||||||||  |||||  |||||| |||||||| |||||||    
T  23648728 aacatcaacacatcttaaacagcttaacagattataattaac 23648769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 24755912 - 24755993
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| || ||||| || |||||||||| |||||||||||||||||||||||| ||||||   ||||||||||    
T  24755912 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacaca 24755993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 19983255 - 19983365
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaa 231  Q
    |||||||| ||||||| ||||| || ||  |||||||||||||| || ||||||||||| ||||||| |||||||||||| || |||||||| || ||||    
T  19983255 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttaaataggtcacattactacccagggttccatctctaatcaaa 19983353  T
Q  232 acatgcgacaca 243  Q
      ||||||||||    
T  19983354 ttatgcgacaca 19983365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17140946 - 17141031
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||  || ||||||||||| ||||| |||  || ||||||||    
T  17140946 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaatccatcatgacataataatatcgaatgtaaatcatcaac 17141031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6520398 - 6520486
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatc 87  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||  || ||||| ||||  ||||| ||| ||| |||||||||||    
T  6520398 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 6520486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 21168703 - 21168568
Alignment:
Q  109 aagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattact 206  Q
    ||||||||||  ||||||| ||  ||||||||| ||||||| ||||| || ||  |||||||||||||| || |||||||||| |||||||   ||||||    
T  21168703 aagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggttatattact 21168605  T
Q  207 acccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||| |||||||||| || ||||  ||||||||||    
T  21168604 acccaaaggtccatctctaatcaaactatgcgacaca 21168568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 377469 - 377528
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    |||||||||||||| || ||||| ||||||||||||| |||||||||| |||||||||||    
T  377469 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatc 377528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5866365 - 5866323
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  5866365 tcatgcagcttagttaaataacaaacagcaacataggcagtat 5866323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21285627 - 21285716
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||  | |||||||||| ||||  ||||||||| ||| ||| ||||||||    
T  21285627 tcatgcagctttgttaaataacaaacaacaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 21285716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21491025 - 21491067
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  21491025 tcatgcagcttagttaaataacaaacagcaacataggcagtat 21491067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23760935 - 23760893
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  23760935 tcatgcagcttagttaaataacaaacagcaacataggcagtat 23760893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38855342 - 38855300
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  38855342 tcatgcagcttagttaaataacaaacagcaacataggcagtat 38855300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 17926635 - 17926578
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||| |||||||| ||||| ||||||| |||||||||| |||||||||    
T  17926635 cagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtcca 17926578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 20465967 - 20465911
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcc 218  Q
    |||||||||||||| || ||||| ||||||||||||| |||||||||| ||||||||    
T  20465967 cagcttcacagattgcagttaacctcttatataggtcacattactacctaagggtcc 20465911  T

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Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 21162015 - 21161925
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||||||| ||||||| ||||| || ||  |||||||||||||| || |||||||||| |||||||   |||||||||||| ||||||||||    
T  21162015 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctc 21161925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 983497 - 983455
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  983497 tcatgcagcttagttaaataacaatcagcaacataggcagtat 983455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 19259509 - 19259451
Alignment:
Q  163 agcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||||||||||||| || ||||| |||| |||||||| |||||||||| |||||||||||    
T  19259509 agcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatc 19259451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 25363121 - 25363047
Alignment:
Q  109 aagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaatta 182  Q
    |||||||||||||| |||||||  ||||||||||||||| |||||  |||||  ||||||||||||||| |||||    
T  25363121 aagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagattataatta 25363047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19154978 - 19154935
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtata 44  Q
    |||||||||||||||||  ||||||||||||||| |||||||||    
T  19154978 tcatgcagcttagttaataaacaaacagcaacataggcagtata 19154935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20498592 - 20498681
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta--tacaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||| |||||||||  ||||||||||||||| |||||||  || || | ||||| ||||  ||||||||| ||| ||||||||||||    
T  20498592 tcatgcaacttagttaataaacaaacagcaacataggcagtatgtaaaatagcatgatataacaatatcaaatgcaagtcatcaacatct 20498681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26355789 - 26355747
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||| |||||||| |||||| ||||||||    
T  26355789 tcatgcagcttagttaaacaacaaacaacaacataggcagtat 26355747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13508176 - 13508108
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatc 67  Q
    ||||||||||||||||| |||||| ||||||||| |||| |||  |||||| ||||| ||||| |||||    
T  13508176 tcatgcagcttagttaattaacaatcagcaacataggcaatatgcacaacatcatgatataataatatc 13508108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 15602945 - 15602888
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||| || ||||| ||||| ||||||| |||||||||  |||||||||    
T  15602945 cagcttcacagatttcagttaacatcttaaataggtcacattactacttaagggtcca 15602888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 15611397 - 15611340
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||| || ||||| ||||| ||||||| |||||||||  |||||||||    
T  15611397 cagcttcacagatttcagttaacatcttaaataggtcacattactacttaagggtcca 15611340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24353050 - 24353091
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta 42  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  24353050 tcatgcagcttagttaataaacaaacagcaacataggcagta 24353091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37116377 - 37116418
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta 42  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  37116377 tcatgcagcttagttaataaacaaacagcaacataggcagta 37116418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14409579 - 14409495
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||    
T  14409579 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 14409495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16413451 - 16413367
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||    
T  16413451 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 16413367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 8e-76; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 20309138 - 20309313
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  20309138 tcatgcagcttagttaaataacaaatagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 20309237  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||    
T  20309238 tattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 20309313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 40622244 - 40622059
Alignment:
Q  57 ataattatatcaaattcaattcatcaacatcttatgtatacaat-----tattctttaagtaatgcataaacattataatacatcataatcaacatcaac 151  Q
    ||||||||||||| |||||||||||||||||||||||||||| |     ||||||| ||||||||||||||||||||||||||||||||||||||  |||    
T  40622244 ataattatatcaa-ttcaattcatcaacatcttatgtatacagtacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaac 40622146  T
Q  152 atgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcga 239  Q
    || || ||  |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  40622145 atctcataa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaaacaaaatatgcga 40622059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 38205 - 38021
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||  || ||||||||||| ||||||| ||| |||||||| |||||||||||||||    
T  38205 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacagcatgacataataatatcaatttcgattcatcatcatcttatgtataca 38107  T
Q  99 attattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |  |||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||| |||||||| |||||| |||||||    
T  38106 aacattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatgtcttatacagcttcagagattataattaac 38021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 23285895 - 23286082
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| |||| |||||||| ||||||| | ||||||||||||||||||  ||| |||     
T  23285895 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaca-gacataataatatcaattgcaattcatcaacatcttaaatattcaaa 23285992  T
Q  101 tattctttaagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    | ||||| |||||||||||||| |||||||  ||||||||||||||| |||||  |||||  ||||||||||||||| ||||||| ||||    
T  23285993 tgttcttcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatctt 23286082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 23103486 - 23103263
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaa 99  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| || |||||||| ||||||||||||||||||||||||||||| |   || ||     
T  23103486 tcatgcagcttagttaaataa-aaacagcaacataggcagtatacaaacagcatgacatgattatatcaaattcaattcatcaacatctcaatcattcat 23103388  T
Q  100 ttattctttaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggt 197  Q
    | ||  || |||| |||||  |||||||||||  |||||| |  |||||  ||||| || ||  |||||||||||||| || ||||||||||||||||||    
T  23103387 tcataattcaagtcatgcaattaaacattatatcacatcaaatccaacactaacatctcata-acagcttcacagattgcagttaacttcttatataggt 23103289  T
Q  198 ctcattactacccaagggtccatctc 223  Q
    |||||||||||| |||||||||||||    
T  23103288 ctcattactaccaaagggtccatctc 23103263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 22731325 - 22731139
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||||| ||||   ||||||||| ||||||| | |||||||||||||| |||  ||| |    
T  22731325 tcatgcagcttagttaaataacaa-cagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatattaaatattc 22731227  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  22731226 aaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 22731139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 23060543 - 23060728
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||   |||||||||||||| ||||||| | ||| ||| ||||||||||  |||      
T  23060543 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatatta 23060641  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| ||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  |||||||||| |||| |||||||    
T  23060642 aattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca-attataattaac 23060728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 23076472 - 23076658
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||   ||||||||| ||||||| | ||| ||| ||| ||||||  ||| |    
T  23076472 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaatatcttaaatattc 23076570  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| ||| |||||||||| | |||||||||  |||||||||||||||||||||   ||||  ||||||||||||||| |||||||    
T  23076571 aattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacagcttaaacagcttcacagattataattaac 23076658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 298906 - 298714
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||   || |||||||||| |||||||| | ||||||| ||||||||||  ||| |    
T  298906 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattc 298807  T
Q  98 aattattctttaagtaatgcat-aaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    || || |  | ||||||||||| ||||||||||  |||||||||| || | |||||  |||||| |||||||||| |||| | ||||| ||||    
T  298806 aaataattctcaagtaatgcataaaacattatatcacatcataattaataacaacacatcttatacagcttcacatattatagttaacctctt 298714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 22738270 - 22738085
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||  || || |||||| ||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  22738270 tcatgcagcttagttaaataacaa-cattaa-ataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 22738173  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  22738172 aaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 22738085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 23654477 - 23654286
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || || ||| ||||| ||||||   || ||||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  23654477 tcatgcagcttagttaaataacaa-caacagcataggcagcatacaaatacatcatgacataataatatcaattgcaattcatcaacatcttaaatattc 23654379  T
Q  98 aattattctttaagtaatgcat-aaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    || ||||  | ||||||||||| ||||||||||  |||||||||| |||| |||||  |||||  ||||||||||||||| ||||||| ||||    
T  23654378 aagtattactcaagtaatgcataaaacattatatcacatcataattaacaacaacacatcttaaacagcttcacagattataattaacctctt 23654286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 22740942 - 22740807
Alignment:
Q  109 aagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattact 206  Q
    ||||||||||  ||| |||||||  |||||||| ||||||| ||||| || ||  || ||||| ||||| || |||||||||||||||||||||||||||    
T  22740942 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-caacttcaaagattgcagttaacttcttatataggtctcattact 22740844  T
Q  207 acccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||||||||||||||| || ||||  ||||||||||    
T  22740843 acccaagggtccatctctaatcaaattatgcgacaca 22740807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 22758697 - 22758562
Alignment:
Q  109 aagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattact 206  Q
    ||||||||||  ||| |||||||  |||||||| ||||||| ||||| || ||  |||||||| ||||| || |||| ||||||||||||||||||||||    
T  22758697 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-cagcttcatagattgcagttaatttcttatataggtctcattact 22758599  T
Q  207 acccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||||||||||||||| || ||||  ||||||||||    
T  22758598 acccaagggtccatctctaatcaaattatgcgacaca 22758562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 243
Target Start/End: Complemental strand, 22799172 - 22798973
Alignment:
Q  44 acaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcata-aacattataatacatcataatc 142  Q
    |||||| |||||| | || ||||||| |||| |||| ||||||||||   || |||| ||   |||||||| ||| | |||||||||  |||||||| ||    
T  22799172 acaacatcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaaggcacataacattatatcacatcatattc 22799073  T
Q  143 aacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacac 242  Q
    ||||| ||||| || ||  |||||||||| ||| || ||||||||||||||||||| |||||||||||| ||||||||||| || ||||  |||||||||    
T  22799072 aacattaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgacac 22798974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 23038227 - 23038307
Alignment:
Q  163 agcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||| || |||| |||||||||||    
T  23038227 agcttcacagattgcagataacttcttatataggtctcaatactacccaagggtccatctctaatcaaatcatgcgacaca 23038307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 22337145 - 22337331
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||  ||| ||||| || ||||   ||||||||| ||||||||| |||  || |||||||| |  |||||    
T  22337145 tcatgcagcttagttaaataacaa-cagcaacacaggctgtatataaaaacagcatgacataataatatcaaatgcaagacaacaacatctcaaatatac 22337243  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||  || ||||||||| || |||||||||  |||||||||||||||||||||| |||||  || ||||||| |||| |||||||    
T  22337244 attcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacatatcttaaacaacttcacaaattataattaac 22337331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 210
Target Start/End: Original strand, 23660061 - 23660264
Alignment:
Q  9 cttagttaaataacaaacagcaacatgggcagtatac--aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattct 106  Q
    |||||||||| ||||| ||||||||| ||||||||||  ||||  |||||||||| ||||||||| ||| ||| ||||||||||  ||| |||| ||       
T  23660061 cttagttaaacaacaa-cagcaacataggcagtatacgaaacaggatgacataataatatcaaatgcaaatcaacaacatcttaaatattcaatcataac 23660159  T
Q  107 ttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattac 205  Q
    | ||||||||| || |||||||||  |||||||||||||||||||||  |||||  |||||| ||| |||| ||||||| || |  ||| |||||| |||    
T  23660160 tcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacaaattataattaacatcatcaataagtctcaatac 23660259  T
Q  206 taccc 210  Q
    |||||    
T  23660260 taccc 23660264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 219
Target Start/End: Complemental strand, 23019752 - 23019577
Alignment:
Q  44 acaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcata-aacattataatacatcataatc 142  Q
    ||||||||||||| | || ||||||| |||| |||| ||||||||||   || |||| ||   |||||||||||| | ||| |||||  |||||||| ||    
T  23019752 acaacaacatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatcacatcatattc 23019653  T
Q  143 aacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    ||||| ||||| || ||   ||||||||| ||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  23019652 aacattaacatttcataaa-agcttcacaaattgcaaataacttcttatataggtcacattactacccaagggtcca 23019577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7824 - 7735
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||  ||||||||||||||| ||||||||  | |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  7824 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 7735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7679615 - 7679657
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  7679615 tcatgcagcttagttaaataacaaacagcaacataggcagtat 7679657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25175880 - 25175922
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  25175880 tcatgcagcttagttaaataacaaacagcaacataggcagtat 25175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 25963645 - 25963588
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||| |||||||| ||||| ||||||| |||||||||| |||||||||    
T  25963645 cagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtcca 25963588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22105439 - 22105524
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat---acaacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||| ||||||||   | |||| ||||||||||| ||||||||| ||| ||| ||||    
T  22105439 tcatgcagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaac 22105524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28406006 - 28406048
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  28406006 tcatgcaacttagttaaataacaaacagcaacataggcagtat 28406048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 21918244 - 21918187
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||| || ||||| ||||| ||||||| |||||||||| |||||||||    
T  21918244 cagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtcca 21918187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 45678078 - 45678002
Alignment:
Q  167 tcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||||||| |||||||| || |||||||||| |||||||||| ||| ||||||| | || |||  |||||||||||    
T  45678078 tcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaactcatgcgacaca 45678002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 23207307 - 23207350
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtata 44  Q
    |||||||||||||||||  ||||||||||||||| |||||||||    
T  23207307 tcatgcagcttagttaataaacaaacagcaacataggcagtata 23207350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19671860 - 19671902
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||    
T  19671860 tcatgcagcttagttaattaacaatcagcaacataggcagtat 19671902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23072040 - 23071998
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||| |||| |||||| ||||||||    
T  23072040 tcatgcagcttagttaaataacgaacaacaacataggcagtat 23071998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 23708706 - 23708621
Alignment:
Q  5 gcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||||||||||||||| | |||||||| ||||||||  | |||||||||| ||||  ||||||| | ||| ||||| ||||||    
T  23708706 gcagcttagttaaataacagatagcaacataggcagtatgcaaaacaacatgatataacaatatcaattgcaaatcatcgacatct 23708621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 22811839 - 22811782
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||| || ||||| ||||| ||||||| |||||||||| || ||||||    
T  22811839 cagcttcacagatttcacttaacatcttaaataggtcacattactacctaaaggtcca 22811782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 37524856 - 37524912
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||| | |||||||| ||||| ||||||| |||||||||| |||||||||    
T  37524856 cagcttcacagacttcaattaacatctta-ataggtcacattactacctaagggtcca 37524912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 26505406 - 26505490
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaa---catgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   ||||||||||| ||   ||||||||||| ||||||||| ||| ||| ||||    
T  26505406 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaac 26505490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 26507884 - 26507968
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaa---catgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   ||||||||||| ||   ||||||||||| ||||||||| ||| ||| ||||    
T  26507884 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaatagcatgacataataatatcaaatgcaagtcaacaac 26507968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 16312 - 16487
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||     
T  16312 tcatgcagcttagttaaataagaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatattatgtatacaaa 16411  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
     |||||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||    
T  16412 cattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 16487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 5e-71; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 17046517 - 17046700
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17046517 tcatgcagcttagttaaataacaaacagcaacataggtagtatagaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 17046616  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     |||||| |||||||| ||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||||| |||||||    
T  17046617 cattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacatatcttattcagcttcacagattataattaac 17046700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 230
Target Start/End: Complemental strand, 15121834 - 15121663
Alignment:
Q  57 ataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtc 156  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||   ||||| ||    
T  15121834 ataattatatcaa-ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactcaaacatctc 15121736  T
Q  157 ttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaa 230  Q
     || ||||| ||||||||| || |||||||||||||||||||||||||||||| || ||||||| || ||||||    
T  15121735 ata-tcagcctcacagattgcagttaacttcttatataggtctcattactacctaatggtccatgtctaaacaa 15121663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 14053392 - 14053207
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacat-cttatgtataca 98  Q
    ||||||| ||||||||||||||||||| || ||| | |||||||||| || ||||||||||| ||||||| |||||||||||||||| |||||| |||||    
T  14053392 tcatgcaacttagttaaataacaaacaacagcatagacagtatacaaacagcatgacataataatatcaatttcaattcatcaacattcttatgcataca 14053293  T
Q  99 attattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | ||||||| |||||||||||||||||||||  ||||||||||||||| |||||| |||||| | ||||||||||||| |||||||    
T  14053292 aatattcttcaagtaatgcataaacattatatcacatcataatcaacaacaacatatcttatacggcttcacagattataattaac 14053207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 12902787 - 12902978
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||   ||||||||| ||||||| |  |||||||||||||||||  ||| |    
T  12902787 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattcatcaacatcttaaatattc 12902885  T
Q  98 aattattctttaagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    || |||| || |||||||||||||| |||||||  ||||||||||||||| |||||  |||||  ||||||||||||||| ||||||| ||||    
T  12902886 aaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 12902978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 7088907 - 7089098
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  7088907 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttacatattc 7089005  T
Q  98 aattattctttaagtaatgcat-aaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    || |||| || ||||||||||| ||||||||||  |||||||||| | || |||||  |||||  || |||||||||||| ||||||| ||||    
T  7089006 aaatattattcaagtaatgcataaaacattatatcacatcataattagcaacaacacatcttaaacaacttcacagattataattaacctctt 7089098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 22636465 - 22636650
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||| | |||| ||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  22636465 tcatgcagcttagttaaataacaa-caacaacatagacagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 22636563  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||||| |||||||||  ||||||||||| |||||||||  |||||  ||||||||||||||| |||||||    
T  22636564 aaatattcttcaagtaatgcatataacattatatcacatcataatcgacatcaacacatctta-acagcttcacagattataattaac 22636650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 44052859 - 44053045
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||| ||||||||||||| || |||||| |||||||||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  44052859 tcatgcagctcagttaaataacaa-catcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 44052957  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||  | |||||||||  |||||||||||||||||| ||  |||||  ||||||||||||||| |||||||    
T  44052958 aaatattcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatcttaaacagcttcacagattataattaac 44053045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16270326 - 16270149
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||| |||||||||||  |||||||| ||||||||||||  || ||||||||||| ||||||||| ||| | | ||||||||||  ||| ||    
T  16270326 tcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattca 16270228  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    ||||| ||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  |||||||||||||||    
T  16270227 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 16270149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 16377612 - 16377428
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaa 99  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| ||||||||| ||| ||| |||||||| |  ||||||     
T  16377612 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacat 16377514  T
Q  100 ttattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | ||  || ||||||||| || |||||||||  ||||||||||||||||||||   |||||  ||||| ||||||||| |||||||    
T  16377513 tcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacgcatcttaaacagctccacagattataattaac 16377428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 16240060 - 16239875
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||||| |||| |||||||||||  ||||| || ||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||  ||| ||    
T  16240060 tcatgcaacttaattaaataacaat-agcaaaataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattca 16239962  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| |||||||||||||| | |||||||||  | |||||||||||||||||||  |||||  ||||||| ||||||| |||||||    
T  16239961 attatactttaagtaatgcaaataacattatatcatatcataatcaacatcaacacatcttaaacagcttcgcagattataattaac 16239875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 7798804 - 7798958
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||   ||||||||| ||||||| | ||| ||||||||||||||  ||| |    
T  7798804 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcatcaacatcttaaatattc 7798902  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaaca 152  Q
    |||||| ||| |||||||||| | |||||| ||  ||| |||||||||||||||||    
T  7798903 aattatacttcaagtaatgcacataacattgtatcacaacataatcaacatcaaca 7798958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 23374450 - 23374259
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||   || |||||||||| |||||||| | ||||||| ||||||||||  ||| |    
T  23374450 tcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattc 23374352  T
Q  98 aattattctttaagtaatgcat-aaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    || || |  | ||||||||||| ||||||||||  ||||||||||||||| |||||  |||||   ||||||| |||||| | ||||| ||||    
T  23374351 aaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacagatcttaaaaagcttcagagattatagttaacctctt 23374259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 14038678 - 14038863
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||   |||||||||||   ||||||| |||||| ||||||||| ||| ||| |||||||| |  |||||    
T  14038678 tcatgcagcttagttaaataacaa-cagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtcaacaacatctcaattatac 14038776  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaa 183  Q
    | | ||  || |||||||||| | |||||||||  |||||||||||||||||||||  | |||  ||||||||||||||| ||||||    
T  14038777 attcatatttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatgttaaacagcttcacagattataattaa 14038863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 15093909 - 15094045
Alignment:
Q  107 ttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattac 205  Q
    |||||||||||| | |||||||||  |||||||| ||||||| ||||| || ||  |||||||| ||||| || ||||||||||||||||||| ||||||    
T  15093909 ttaagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcagagattgcagttaacttcttatataggtcacattac 15094007  T
Q  206 tacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    || ||||||||||||||| || ||||  ||||||||||    
T  15094008 taaccaagggtccatctctaatcaaattatgcgacaca 15094045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 13569674 - 13569783
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaa 231  Q
    |||||||| ||||||| ||||| || ||  |||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||| || ||||    
T  13569674 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaa 13569772  T
Q  232 acatgcgacac 242  Q
      |||||||||    
T  13569773 ttatgcgacac 13569783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 23843631 - 23843750
Alignment:
Q  123 cattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatct 222  Q
    ||||| || |||| ||||||||||| ||||| || ||  |||||||||||||| || ||||| ||||||||||||| |||||| ||||||||||||||||    
T  23843631 cattaaaacacattataatcaacattaacatttcataa-cagcttcacagattgcagttaacatcttatataggtcacattaccacccaagggtccatct 23843729  T
Q  223 ccaaacaaaacatgcgacaca 243  Q
    | || ||||  ||||||||||    
T  23843730 ctaatcaaattatgcgacaca 23843750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 12570212 - 12570293
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| || ||||| || |||||||||| |||||||||||||||||||||||| ||||||   ||||||||||    
T  12570212 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacaca 12570293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 6899921 - 6900062
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac--aacaacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||||| |||||||||||||| || |||||||| ||||||||||  ||||||||  |||||| ||||||||| ||| ||| ||||||||||  ||| ||    
T  6899921 tcatgcatcttagttaaataac-aatagcaacataggcagtatacaaaacaacatagcataataatatcaaatgcaagtcaacaacatcttaaatattca 6900019  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataa 140  Q
    ||||| ||| |||||||| | | |||||||||  |||||||||    
T  6900020 attatacttcaagtaatgtacataacattatatcacatcataa 6900062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 7893733 - 7893916
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||| ||||   ||||||||| ||||||| | ||| ||| || |||||||  ||| |    
T  7893733 tcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 7893831  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| ||| |||||||||| | | ||||||   ||||||||||   || |||||  |||||  ||||||||||||||| |||||||    
T  7893832 aattatacttcaagtaatgcacataccattatttcacatcataat---cagcaacacatcttaaacagcttcacagattataattaac 7893916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 44675794 - 44675904
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaa 231  Q
    |||||||| ||||||| ||||| || ||  |||||||||||||| || ||||||||||| ||||||| |||||||||| | ||||||||||| || ||||    
T  44675794 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttaaataggtcacattactacctaggggtccatctctaatcaaa 44675892  T
Q  232 acatgcgacaca 243  Q
      ||||||||||    
T  44675893 ttatgcgacaca 44675904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13942 - 13853
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||  ||||||||||||||| ||||||||  | |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  13942 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 13853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14280343 - 14280431
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  14280343 tcatgcagcttagttaaataacaa-cagcaacacgg-cagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatct 14280431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12288301 - 12288259
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  12288301 tcatgcagcttagttaaataacaaacagcaacataggcagtat 12288259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12774037 - 12774079
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  12774037 tcatgcagcttagttaaataacaaacagcaacataggcagtat 12774079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15551847 - 15551889
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  15551847 tcatgcagcttagttaaataacaaacagcaacataggcagtat 15551889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 43256227 - 43256161
Alignment:
Q  24 aacagcaacatgggcagtatac-aacaacatgacataattatatcaaattcaattcatcaacatctt 89  Q
    ||||||||||| ||||| |||| |||||||||||||||| ||||||| ||||||||| |||||||||    
T  43256227 aacagcaacataggcagcataccaacaacatgacataataatatcaatttcaattcaacaacatctt 43256161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52243287 - 52243245
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  52243287 tcatgcagcttagttaaataacaaacagcaacataggcagtat 52243245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 52873458 - 52873367
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatctta 90  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||   |||| ||||||||||| ||||||| | ||| ||| || |||||||    
T  52873458 tcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 52873367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3096323 - 3096373
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca 52  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  3096323 tcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaaaca 3096373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39706379 - 39706337
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  39706379 tcatgcagcttagttaaataacaaacaacaacataggcagtat 39706337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 8846391 - 8846428
Alignment:
Q  6 cagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  8846391 cagcttagttaaataacaaacagcaacataggcagtat 8846428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 16356881 - 16356824
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||| || ||||| ||||| ||||||| |||||||||| |||||||||    
T  16356881 cagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtcca 16356824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43198646 - 43198613
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacat 34  Q
    ||||||||||||||||||||||||||||||||||    
T  43198646 tcatgcagcttagttaaataacaaacagcaacat 43198613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 16348592 - 16348536
Alignment:
Q  163 agcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    ||||||||||||| || ||||| ||||| ||||||| |||||||||| |||||||||    
T  16348592 agcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtcca 16348536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 54798845 - 54798756
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||||||||||| |||||||| ||||||||   ||||||||||| ||||   ||||||||| ||||||||| ||| ||| ||||||||    
T  54798845 tcatgcagcttagttgaataacaa-cagcaacacaagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 54798756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 3096776 - 3096859
Alignment:
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||||| |||||||||||||||||| ||   ||||||||||| || |||||  |||||  |||||||||| |||| |||||||    
T  3096776 tattcttcaagtaatgcataaacattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatattataattaac 3096859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 15125110 - 15124998
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaa 231  Q
    |||| ||||||||||| ||||| || ||  |||||||||||||| || ||||| | ||| | ||||| | |||||||||| ||||||| ||| |||||||    
T  15125110 acattataatcaacattaacatttcataa-cagcttcacagattgcagttaacat-ttaaaaaggtcactttactacccaggggtccaactctaaacaaa 15125013  T
Q  232 acatgcgacacatat 246  Q
      |||||||||||||    
T  15125012 ttatgcgacacatat 15124998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 16488005 - 16487947
Alignment:
Q  163 agcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||||||||||||  |||||||| ||||| ||||| | |||||||||| |||||||||||    
T  16488005 agcttcacagatctcaattaacatcttaaataggacacattactacctaagggtccatc 16487947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 17048053 - 17047989
Alignment:
Q  109 aagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagcttcacag 172  Q
    |||||||||||||| |||||||  ||||||||||||||| |||||  |||||  |||||||||||    
T  17048053 aagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacag 17047989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 18215409 - 18215325
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||    
T  18215409 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 18215325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19618307 - 19618223
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||    
T  19618307 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaac 19618223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44929015 - 44928926
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||| ||||||||||| || |||||| ||| |||  |||||||    
T  44929015 tcatgcagcttagttaaataac-aacagcaacacaagcagtatacaaaaacagcatgacataataatgtcaaatgcaagtcaataacatct 44928926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 1319 - 1494
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  1319 tcatgcagcttagttaaataacaaacagcaacataggcagtgtacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 1418  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
     |||||| |||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||| ||||||    
T  1419 cattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagatta 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7296 - 7471
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  7296 tcatgcagcttagttaaataacaaacaacaacataggcagtatacaacaacatgaaataattatatcaaattcaattcatcaacatcttatgtatacaaa 7395  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
     |||||| |||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||| ||||||    
T  7396 cattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcatagatta 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 51612 - 51787
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||     
T  51612 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacatcatgacataattataacaaattcaattcatcaacatcttatgtatacaaa 51711  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    ||| ||| ||| |||||||||||||||||| || ||||| |||||| |||||| ||||||||||||||||||||||    
T  51712 tatccttcaagaaatgcataaacattataacacttcatattcaacaacaacatatcttattcagcttcacagatta 51787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 3e-66; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 27847921 - 27847746
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||||||| |||||||||||| |||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||     
T  27847921 tcatgcagcttagttaaataataaacagcaacataggcagtgtacaacagtatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 27847822  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
     |||||| |||||||||||||||||||| | ||||||||||||||| |||||| ||||||||||||||||||||||    
T  27847821 cattcttcaagtaatgcataaacattatcacacatcataatcaacaacaacatatcttattcagcttcacagatta 27847746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 184
Target Start/End: Original strand, 40443424 - 40443605
Alignment:
Q  4 tgcagcttagttaaataacaaacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaatta 102  Q
    |||||||||||||||||||||||||||||||  |||||| |||| || ||||||||||| ||||||| |||||||||||||||||||| |||||||| ||    
T  40443424 tgcagcttagttaaataacaaacagcaacatacgcagtaaacaaacagcatgacataataatatcaatttcaattcatcaacatcttaggtatacaaata 40443523  T
Q  103 ttctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| |||||||||||||||||||||  ||||||||||||||| | |||| |||||| ||||||||||||||| |||||||    
T  40443524 ttcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaac 40443605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 221
Target Start/End: Complemental strand, 17138083 - 17137932
Alignment:
Q  69 aattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttc 168  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||  ||||| || || ||||||||    
T  17138083 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttc 17137985  T
Q  169 acagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  17137984 acagattgcagttaacttcttatataggtctcattactacctaagggtccatc 17137932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 12187113 - 12187266
Alignment:
Q  69 aattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttc 168  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||   ||||| ||||| ||||||||    
T  12187113 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaactcaaacatctctta-tcagcttc 12187211  T
Q  169 acagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    ||||||| || |||||||||||||||||||||||||||||| || ||||||||||    
T  12187212 acagattgcagttaacttcttatataggtctcattactacctaatggtccatctc 12187266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 12698861 - 12699048
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa----caacatgacataattatatcaaattcaattcatcaacatcttatgtata 96  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||    || ||||||||||| ||||||| | ||||||||||||||||||  |||     
T  12698861 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattcatcaacatcttaaatatt 12698959  T
Q  97 caattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||| ||||||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  12698960 caaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 12699048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 18456503 - 18456319
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||| |  |||||||| ||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||  ||| ||    
T  18456503 tcatgcagcttagttaaataacgat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatcttaaatattca 18456405  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaa 183  Q
    ||||| ||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| ||||||    
T  18456404 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 18456319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 9509219 - 9509405
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||| ||||| |||||||||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  9509219 tcatgcagcttagttaaataacaa-cagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 9509317  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||| | |||| ||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  9509318 aaatattcttcaagtaatgcacataacactatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 9509405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 10589069 - 10589254
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||   |||||||||||||| ||||||| | ||||||| |||||||||   | | |    
T  10589069 tcatgcagcttagttaaataacaa-cagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaacaacatcttcaatgttc 10589167  T
Q  98 aattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| ||| |||||||||||||||||  |||||||||||| || |||||  |||||   |||||||||||||| |||||||    
T  10589168 aaatattcttcaagcaatgcataaacattatatcacatcataatcagcaacaacacatcttaaatagcttcacagattataattaac 10589254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 16386339 - 16386147
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||||||| | |||| ||||||||||||   || |||||||||| |||||||| |  | |||||||||||||||  ||| |    
T  16386339 tcatgcagcttagttaaataacaaacaacgacataggcagtatacaaaatcagcatgacataaatatatcaattgtatttcatcaacatcttaaatattc 16386240  T
Q  98 aattattctttaagtaatgcat-aaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    ||  | |  | ||||||||||| |||||||||| |||||||||||||||| |||||  |||||  ||||||||||||||| | ||||| ||||    
T  16386239 aaacaattctcaagtaatgcataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacagattatagttaacctctt 16386147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 26212034 - 26212217
Alignment:
Q  9 cttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattc 105  Q
    |||||||||||||||| ||||||||| ||||||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||  ||| ||| || |     
T  26212034 cttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataatt 26212132  T
Q  106 tttaagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
     | |||||||||||||| |||||||  |||| |||||||||| |||||  |||||  ||||||||||||||| ||||||| ||||    
T  26212133 ctcaagtaatgcataaaacattatatcacattataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 26212217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 109 - 253
Target Start/End: Complemental strand, 18154818 - 18154673
Alignment:
Q  109 aagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattact 206  Q
    ||||||||||  |||||||||||   ||||||| ||||||| ||||| || ||  |||||||||| ||| || |||||||||||||||||||||||||||    
T  18154818 aagtaatgcaattaaacattatatcgcatcatattcaacattaacatctcataa-cagcttcacatattgcagttaacttcttatataggtctcattact 18154720  T
Q  207 acccaagggtccatctccaaacaaaacatgcgacacatattgcattt 253  Q
    |||||| |||||||||  || |||| ||||||||||| || ||||||    
T  18154719 acccaatggtccatctttaatcaaatcatgcgacacagatcgcattt 18154673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 38227511 - 38227696
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||  ||| ||    
T  38227511 tcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattca 38227609  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| || ||||| | | | |||||||  ||||| |||||||||||||||| |||||   | ||||||| |||| |||||||    
T  38227610 attatacttcaattaatgtacatatcattatatcacatcttaatcaacatcaacatatcttaaatatcttcacatattataattaac 38227696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 9703429 - 9703538
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaa 231  Q
    |||||||||||||||| ||||| || ||  |||||||||||||| || ||||||||||||||||||| ||||| |||||||||||||||||| || ||||    
T  9703429 acatcataatcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaa 9703527  T
Q  232 acatgcgacac 242  Q
      |||||||||    
T  9703528 ttatgcgacac 9703538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 3564455 - 3564301
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||   |||||||||||||||| |||||||||  || ||| |||||||| |  |||||    
T  3564455 tcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtcaacaacatctcaattatac 3564357  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaaca 152  Q
    | | ||  || ||||||||| || ||||||| |  |||||||||||||||||||||    
T  3564356 attcataattcaagtaatgcgtataacattagatcacatcataatcaacatcaaca 3564301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 24054618 - 24054721
Alignment:
Q  119 taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcc 218  Q
    ||||||| |||  |||||||||||||||  ||||| || ||  |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  24054618 taaacatcatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaactccttatataggtctcattactacccaagggtcc 24054716  T
Q  219 atctc 223  Q
    |||||    
T  24054717 atctc 24054721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 11880456 - 11880528
Alignment:
Q  174 ttacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacacatat 246  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||||||| || ||||  |||||||||||||    
T  11880456 ttacagttaacatcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatat 11880528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 19649410 - 19649331
Alignment:
Q  164 gcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||| || ||||||||| || ||||||||| ||||||||||||||||||||| || ||||  ||||||||||    
T  19649410 gcttcacagattgcagttaacttctaatttaggtctcaatactacccaagggtccatctctaatcaaattatgcgacaca 19649331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 67775 - 67817
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  67775 tcatgcagcttagttaaataacaaacagcaacataggcagtat 67817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28505389 - 28505347
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  28505389 tcatgcagcttagttaaataacaaacagcaacataggcagtat 28505347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34200816 - 34200858
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  34200816 tcatgcagcttagttaaataacaaacagcaacataggcagtat 34200858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 48273421 - 48273508
Alignment:
Q  3 atgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||||||| ||||||||  |||||||||||| ||||   ||||||||| ||||||||| ||| ||| ||||||||    
T  48273421 atgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 48273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13647355 - 13647440
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat---acaacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||| ||||||||   | |||| ||||||||||| ||||||||| ||| ||| ||||    
T  13647355 tcatgcagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaac 13647440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 16219808 - 16219717
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatctta 90  Q
    ||||| ||||||||||||||||||||| |||||| |||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||||    
T  16219808 tcatgtagcttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctta 16219717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 811222 - 811180
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  811222 tcatgcagcttagttaaataacaaatagcaacataggcagtat 811180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2280210 - 2280121
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||  |||||||| |||||| ||||||||  | |||| ||||| ||||| ||||||||| ||| ||| ||||||||    
T  2280210 tcatgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataataatatcaaatgcaaatcaacaacatct 2280121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 2530205 - 2530139
Alignment:
Q  24 aacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatctt 89  Q
    ||||||||||| ||||  |||||| |||||||||||||| ||||||| ||||||||| |||||||||    
T  2530205 aacagcaacataggcaacatacaaacaacatgacataataatatcaatttcaattcaacaacatctt 2530139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 16056360 - 16056446
Alignment:
Q  3 atgcagcttagttaaataacaaacagcaacatgggcagtatac-aacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||| |||||||||||||||||||||||||| | || ||| | |||||||||| ||||  ||||||||| ||| ||| ||||||||    
T  16056360 atgcaccttagttaaataacaaacagcaacatagacattatgcaaacaacatgatataacaatatcaaatgcaaatcaacaacatct 16056446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16213711 - 16213801
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatctta 90  Q
    |||||||||||||||||||||||| ||||||||  | ||||||||||   |||||||||||||| ||||||||| ||| ||| |||| |||||    
T  16213711 tcatgcagcttagttaaataacaa-cagcaacacag-cagtatacaaaaacaacatgacataataatatcaaatccaagtcaacaacgtctta 16213801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16495432 - 16495474
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  16495432 tcatgcagcttagttaaataacaaacaacaacataggcagtat 16495474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18005676 - 18005718
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  18005676 tcatgcagcttagttaaataacaaacagcaacataagcagtat 18005718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44014208 - 44014250
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  44014208 tcatgcagcttagttaaataacaaacaacaacataggcagtat 44014250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 243
Target Start/End: Complemental strand, 12321666 - 12321589
Alignment:
Q  166 ttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||| || ||||| ||||||||||||| |||||||||| ||| ||||||| | || |||  |||||||||||    
T  12321666 ttcacagattgcagttaacatcttatataggtcacattactacctaagagtccatccctaatcaattcatgcgacaca 12321589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12255884 - 12255842
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| | ||||||    
T  12255884 tcatgcagcttagttaaataacaaacaacaacatagtcagtat 12255842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12901353 - 12901399
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa 47  Q
    |||||||||||||||||  |||||||| |||||| ||||||||||||    
T  12901353 tcatgcagcttagttaataaacaaacaacaacataggcagtatacaa 12901399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 17062050 - 17061966
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac--aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||||| ||||||| |  |||||||||  || | ||||||||||| ||||||||| ||| ||| ||||    
T  17062050 tcatgcagcttagttaaataacaatcagcaac-tcagcagtatacaaaatagcatgacataataatatcaaatgcaagtcagcaac 17061966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 47831837 - 47831879
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| | ||||||    
T  47831837 tcatgcagcttagttaaataacaaacaacaacatagacagtat 47831879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14036284 - 14036325
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta 42  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  14036284 tcatgcagcttagttaataaacaaacagcaacataggcagta 14036325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14346314 - 14346355
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta 42  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  14346314 tcatgcagcttagttaataaacaaacagcaacataggcagta 14346355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 14430070 - 14430127
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||  || ||||| ||||| ||||||| |||||||||| |||||||||    
T  14430070 cagcttcacagatctcagttaacatcttaaataggtcacattactacctaagggtcca 14430127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 22072944 - 22072981
Alignment:
Q  2 catgcagcttagttaaataacaaacagcaacatgggca 39  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  22072944 catgcagcttagttaaataacaaacaacaacataggca 22072981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24275198 - 24275282
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||    
T  24275198 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 24275282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 44116536 - 44116620
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaac 84  Q
    ||||||||||| |||||||||||| ||||||||  | ||||||||||   |||||||||||||| ||||||||| ||| ||| ||||    
T  44116536 tcatgcagcttggttaaataacaa-cagcaacacag-cagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaac 44116620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 1140 - 965
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||| ||| ||||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  1140 tcatgcagcttagttaattaataaacatcaacataggcagtatacaacatcatgacataattatatcaatttcaattcatcaacatcttatgtatacaaa 1041  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||| |||||| | |||| |||||||||||||||    
T  1040 tattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatattttatacagcttcacagatta 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 7e-64; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 16920721 - 16920546
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||     
T  16920721 tcatgcagcttagttaaataacaaacagcagcataggcagtatacaacatcatgacataagtatatcaaattccattcatcaacatcttatgtatacaaa 16920622  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||| |||| | ||||||||||||||| ||||||    
T  16920621 tattcttcaagtaatgcataaacattataccacatcataatcaacaacaacttatcttattcagcttcatagatta 16920546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22831533 - 22831710
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatctt--atgtataca 98  Q
    |||||||||||||||||||||||||||||||||| |||| | | |||| |||||||||||| |||||||||||||||||||||||||||  |||||||||    
T  22831533 tcatgcagcttagttaaataacaaacagcaacataggcactgttcaacgacatgacataatcatatcaaattcaattcatcaacatcttagatgtataca 22831632  T
Q  99 attattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    |  |||||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||    
T  22831633 aacattcttcaagtaatgcataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 22831710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 11185535 - 11185711
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||     
T  11185535 tcatgcagcttagttaaataacaaacaacaacatgtgcagtgtacaacaacatgacataattatatcaaattcaattcatcagcatcttttgtatacaaa 11185634  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattac 177  Q
     |||||| ||||||||||||||| |||||| || ||||||||| || |||||| ||||||||| |||||||||||||    
T  11185635 cattcttcaagtaatgcataaactttataacacttcataatcagcaacaacatatcttattcatcttcacagattac 11185711  T

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Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 35245616 - 35245758
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||     
T  35245616 tcatgcagcttagttaattaacaaacaccaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 35245715  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatca 143  Q
    ||||||| ||||||||||||| |||||||  ||||||||||||    
T  35245716 tattcttcaagtaatgcataatcattatatcacatcataatca 35245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 20361051 - 20360865
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  20361051 tcatgcagcttagttaaataacaa-cagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 20360953  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||||| |||||||||  ||||||||||||||| |||||  |||||  |||||||||| |||| |||||||    
T  20360952 aaatattcttcaagtaatgcatataacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaac 20360865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 20638374 - 20638188
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||   |||||||||||||| ||||||| | ||||| |||||||||||   ||| |    
T  20638374 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaatttatcaacatctttaatattc 20638276  T
Q  98 aattattctttaagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||  |||||| |||||||||||||| | |||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  20638275 aaacattcttcaagtaatgcataaaacgttatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 20638188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 29060570 - 29060755
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| | ||||||    
T  29060570 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatac 29060668  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaa 183  Q
    | | ||  || |||||||||| | |||||||||   ||||||||||||||||||||  |||||  ||||||||||||||| ||||||    
T  29060669 attcataattcaagtaatgcacataacattatatctcatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 29060755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 19303631 - 19303446
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| || |||||  || |||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| |  ||||||    
T  19303631 tcatgcagcttagttaaataacaa-caacaacacaggaagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaattataca 19303533  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     | ||  || |||||||| | | |||||||||  |||||||||||||||||||||  ||||   ||||||||||||||| |||||||    
T  19303532 ttcatatttcaagtaatgtacataacattatatcacatcataatcaacatcaacacatcttcaacagcttcacagattataattaac 19303446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 19863171 - 19863232
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  19863171 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctc 19863232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 19873313 - 19873374
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  19873313 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctc 19873374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 25642165 - 25642030
Alignment:
Q  109 aagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattact 206  Q
    ||||||||||  ||| |||||||  |||||||| ||||||| ||||| || ||  || ||||| ||||| || |||||||||||||||||||||||||||    
T  25642165 aagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-caacttcaaagattgcagttaacttcttatataggtctcattact 25642067  T
Q  207 acccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||||||||||||||| || ||||  ||||||||||    
T  25642066 acccaagggtccatctctaatcaaattatgcgacaca 25642030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 22438951 - 22439054
Alignment:
Q  119 taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcc 218  Q
    ||||| |||||  |||||||||||||||  ||||| || ||  |||||||||||||| || |||||||||||||||| ||||||||||||||||||||||    
T  22438951 taaactttatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatatagatctcattactacccaagggtcc 22439049  T
Q  219 atctc 223  Q
    |||||    
T  22439050 atctc 22439054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 20593803 - 20593987
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||| |||||||||| |||||||||||   |||||||||   |||| ||||||||||| ||||||||| ||| ||| |||||||| |  |||||    
T  20593803 tcatgcagctcagttaaataa-aaacagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatac 20593901  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaatta 182  Q
    ||| ||   | ||||||||| || |||| ||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||    
T  20593902 aatcataaatcaagtaatgcgtataacaatatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataatta 20593987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 17287887 - 17287701
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| || |||||||||   || ||||||||||| ||||||| | ||| ||| || |||||||  ||| |    
T  17287887 tcatgcagcttagttaaataacaa-cagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 17287789  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| ||| |||||||||| | ||||||||   | | |||||||||| ||||||  |||||  ||||||||||| ||| |||||||    
T  17287788 aattatacttcaagtaatgcacataacattatgtcataacataatcaacctcaacacatcttaaacagcttcacaggttataattaac 17287701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 18409918 - 18409732
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||| ||||||||||||| ||||||||  ||||||||||   |||||||||||||||| ||||||||| ||| ||| |||||||| |   || |    
T  18409918 tcatgcagctcagttaaataacaa-cagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaatcatcc 18409820  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||  || || |||| |||| |||||||||  |||||||||||||||||||||  |||||  |||||||||| |||| |||||||    
T  18409819 attcataattcaaataatacatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatattataattaac 18409732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 22432443 - 22432504
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  22432443 cagcttcacagattgtagttaacttcttatataggtctcattactacccaagggtccatctc 22432504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 22780318 - 22780140
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||  ||||| |||| ||||||| ||||   ||||||||| ||||||| | ||| ||| || |||||||  ||| |    
T  22780318 tcatgcagcttagttaaataacaa-caaaaacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtcaacatcatcttaaatattc 22780220  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    |||||| ||| ||||||||||   |||||||||  ||| |||||||||||||||||  |||||  |||||||||||||||    
T  22780219 aattatacttcaagtaatgcacgcaacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 22780140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 25629446 - 25629260
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||| |||| ||| ||||   |||||||||   |||| ||||||||||  ||||||||| ||| ||| |||||||| |  |||||    
T  25629446 tcatgcagcttagttaaattacaa-caggaacacatgcagtatacgaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaattatac 25629348  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||  || ||||||||| || |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  25629347 attcataattcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 25629260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16496274 - 16496365
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatctta 90  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||    
T  16496274 tcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 16496365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 20076730 - 20076857
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac--aacaacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||  |||| ||||||||||| ||||||||| |||   ||||||||||||   || ||    
T  20076730 tcatgcagcttagttaaataac-aacagcaacataggcagtaaacaaaacagcatgacataataatatcaaatgcaa---atcaacatcttaaaaattca 20076825  T
Q  99 attattctttaagtaatgcata-aacattata 129  Q
    ||||| ||| ||||||||| || |||||||||    
T  20076826 attatacttcaagtaatgcgtataacattata 20076857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 15894357 - 15894276
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||||||||||||  | ||||| || |||||||||| |||||||||||||||||||||||| ||||||   ||||||||||    
T  15894357 cagcttcacagattgtagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacaca 15894276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 22334819 - 22334738
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||| ||||||| || |||||||||||||||||||||||| ||||||| ||||||| ||| || ||||  ||||||||||    
T  22334819 cagctttacagattgcagttaacttcttatataggtctcattgctacccaggggtccaactctaatcaaattatgcgacaca 22334738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20109168 - 20109257
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||  ||||||||||||||| ||||||||  | |||||||| | ||||  ||||||||| ||| ||||||||||||    
T  20109168 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacataatataacaatatcaaatgcaagtcatcaacatct 20109257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27333309 - 27333267
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  27333309 tcatgcagcttagttaaataacaaacagcaacataggcagtat 27333267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27394049 - 27394007
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  27394049 tcatgcagcttagttaaataacaaacagcaacataggcagtat 27394007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 21739950 - 21739869
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| |||||||| || |||||||||| |||||||||| ||| ||||||| | ||||||  |||| ||||||    
T  21739950 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaactcatgtgacaca 21739869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1595576 - 1595660
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| |||||||||||   ||||||||   |||||||||||||||| ||||||||| ||||||| ||||    
T  1595576 tcatgcagcttagttaaataac-aacagcaacat-aacagtatacaaaaacaacatgacataataatatcaaatgcaattcaacaac 1595660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25644350 - 25644440
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||| ||||   ||| ||||  |||||||||  || ||||||||||||    
T  25644350 tcatgcagcttagttaaataacagacagcaacataggcagtatgcaaaaacagcgtgatataacaatatcaaatgtaagtcatcaacatct 25644440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 239
Target Start/End: Complemental strand, 15041596 - 15041401
Alignment:
Q  44 acaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatca 143  Q
    |||||| |||||||| || ||||||||| |||||||  ||||||||| |||| |||| |    | |||||||||| | |||||| |  | ||| |||| |    
T  15041596 acaacagcatgacattataatatcaaatgcaattcaataacatcttaagtattcaataaaatctcaagtaatgcacatacattaaaccaaatcttaatta 15041497  T
Q  144 acatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcga 239  Q
     ||||||||  |||||  |||||| |||||||  |  |||| || |   ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  15041496 tcatcaacacatcttaaacagctttacagattgtatctaacatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcga 15041401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 9098605 - 9098563
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  9098605 tcatgcagcttagttaaataacaaacagcaacaaaggcagtat 9098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 31164744 - 31164694
Alignment:
Q  193 taggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  31164744 taggtctcactactacccaggggtccatctctaatcaaaacatgcgacaca 31164694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 18907299 - 18907380
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||| ||| || ||||| ||||| ||||||| |||||||||| ||||||||||| | || |||  |||||||||||    
T  18907299 cagcttcacatattgcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaattcatgcgacaca 18907380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 27416008 - 27415887
Alignment:
Q  24 aacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcat-aa 121  Q
    ||||||||||| ||||| |||||| || |||||||||||  |||||| ||||||||| |||||||||  |||| ||| || |  ||| ||||||||| ||    
T  27416008 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattcttaggtaatgcataaa 27415909  T
Q  122 acattataatacatcataatca 143  Q
    ||||||||  |||| |||||||    
T  27415908 acattatatcacattataatca 27415887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 23019438 - 23019525
Alignment:
Q  3 atgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||  |||||||||||||||  |||||||  | |||||||||| ||||  ||||||||| ||| ||| ||||||||    
T  23019438 atgcagcttagttaataaacaaacagcaacataagcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcaacaacatct 23019525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25656656 - 25656727
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaat 71  Q
    |||||||||||||||||||||| |||||||||||  |||||||||   |||| ||||||||||| |||||||||    
T  25656656 tcatgcagcttagttaaataac-aacagcaacat-agcagtatacaaaaacagcatgacataataatatcaaat 25656727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19652225 - 19652267
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||| |||||||| |||||| ||||||||    
T  19652225 tcatgcagcttagttaaacaacaaacaacaacataggcagtat 19652267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28496562 - 28496520
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||  |||||||| ||||||||    
T  28496562 tcatgcagcttagttaaataacaattagcaacataggcagtat 28496520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29808973 - 29808931
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||  |||||||| ||||||||    
T  29808973 tcatgcagcttagttaaataacaattagcaacataggcagtat 29808931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 19668401 - 19668434
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacat 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  19668401 tcatgcagcttagttaattaacaaacagcaacat 19668434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22782254 - 22782338
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||    
T  22782254 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 22782338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 7e-64; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 38801479 - 38801304
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    |||||||||||||||||||||||||||||||||| |||||| | ||||| || ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  38801479 tcatgcagcttagttaaataacaaacagcaacataggcagtgtgcaacagcaagacataattatatcaaattcaattcatcaacatattatatatacaat 38801380  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||||| |||||| ||||||||||||||||| ||||    
T  38801379 tattcttcaagtaatgcataaacattataacacatcgtaatcaacaacaacatatcttattcagcttcacaaatta 38801304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 27250820 - 27250629
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  27250820 tcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 27250722  T
Q  98 aattattctttaagtaatgcat-aaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    || |||| || ||||||||||| ||||||||||  ||||||||||||||| |||||  |||||  ||||||||||||||| ||||||| ||||    
T  27250721 aaatattattcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 27250629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 50210304 - 50210118
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| | ||||||    
T  50210304 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatac 50210206  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||  || ||||||||| |  |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  50210205 attcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 50210118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 255
Target Start/End: Original strand, 21714687 - 21714834
Alignment:
Q  109 aagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattact 206  Q
    ||||||||||  |||||||||||  |||||||| ||||||  ||||| || ||  |||||||||||||| || |||||||||||||||||||||||||||    
T  21714687 aagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcattact 21714785  T
Q  207 acccaagggtccatctccaaacaaaacatgcgacacatattgcattttc 255  Q
    ||||||||||||||||| || |||| ||||||||||| || ||||||||    
T  21714786 acccaagggtccatctctaatcaaatcatgcgacacagatcgcattttc 21714834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 21026710 - 21026901
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||| || ||||||||||||   || |||||| ||| |||||||| | ||||||| ||||||||||  ||| |    
T  21026710 tcatgcagcttagttaaataacaa-cagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattcaacaacatcttaaatattc 21026808  T
Q  98 aattattctttaagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    || || |  | |||||||||||||| |||||||  ||||||||||||||| |||||  |||||  ||||||||||||||| ||||||| ||||    
T  21026809 aaataattctcaagtaatgcataaaacattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctctt 21026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 34509810 - 34509996
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||   ||||||||| ||||||||| ||| ||| ||||||||||  |||||    
T  34509810 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtcaacaacatcttaattatac 34509908  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||   | ||||||||| || |||||||||  |||||||| ||||||||||||  |||||  |||||||| |||||| |||||||    
T  34509909 attcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcaaagattataattaac 34509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 22354616 - 22354477
Alignment:
Q  46 aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcata-aacattataatacatcataatcaa 144  Q
    |||| ||||||||||  ||||||| | ||||||||||||||||||  ||| ||| ||||||| |||||||| ||| |||||||||  |||||||||||||    
T  22354616 aacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgtatataacattatatcacatcataatcaa 22354517  T
Q  145 catcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||||||  |||||  ||||||||||||||| |||||||    
T  22354516 catcaacacatcttaaacagcttcacagattataattaac 22354477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 48603654 - 48603769
Alignment:
Q  109 aagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattacta 207  Q
    |||||||||||||| |||||||  ||||||||||||||| |||||  |||||  ||||||||||||||| ||||||||||||||||||||| || |||||    
T  48603654 aagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatacta 48603753  T
Q  208 cccaagggtccatctc 223  Q
    || | |||||||||||    
T  48603754 cctaggggtccatctc 48603769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 21788025 - 21787889
Alignment:
Q  107 ttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattac 205  Q
    |||||||||||| | |||||||||  |||||||||||||||||||||| || ||  ||||| || ||||| || ||||||||||||||||||  ||||||    
T  21788025 ttaagtaatgcacataacattatataacatcataatcaacatcaacatttcataa-cagctgcatagattgcagttaacttcttatataggttacattac 21787927  T
Q  206 tacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||||||| ||||||   ||||||||||    
T  21787926 tacccaagggtccatctctaaacaagttatgcgacaca 21787889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 20091401 - 20091320
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| || ||||  ||||||||||    
T  20091401 cagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtccatctcaaatcaaattatgcgacaca 20091320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22468787 - 22468540
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||||| ||||||||||||||||  |||||||| |||||  ||||||||||   |||||| || ||||||| | ||||||| ||||||||||  ||| |    
T  22468787 tcatgcaacttagttaaataacaat-agcaacataggcagattacaacaacagcatgacatcataatatcaattgcaattcaacaacatcttaattattc 22468689  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatatagg 196  Q
    ||| ||   | |||||||||| | |||||||||  |||||||||| | ||||| ||  |||||  ||||||||||||||| ||||| |  |||  | |||    
T  22468688 aataatatctcaagtaatgcacataacattatatcacatcataatta-catcagcacatcttaaacagcttcacagattataattaccaacttcaaaagg 22468590  T
Q  197 tctcattactacccaagggtccatctccaaacaaaacatgcgacacatat 246  Q
    ||||| ||||||||||||||||||||| || | ||  |||||||||||||    
T  22468589 tctcaatactacccaagggtccatctctaatcgaattatgcgacacatat 22468540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 20135262 - 20135403
Alignment:
Q  44 acaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcata-aacattataatacatcataatc 142  Q
    |||||| ||||||||||| ||||||  | ||||||| |||||||||| |||| |||| |  ||| |||||||||||| |||||||||  | ||||||||     
T  20135262 acaacatcatgacataataatatcatgtgcaattcaacaacatcttaagtattcaataaaacttcaagtaatgcatacaacattatatcatatcataatg 20135361  T
Q  143 aacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||||||||  |||||  ||||||||||||||| |||||||    
T  20135362 aacatcaacacatcttaaacagcttcacagattataattaac 20135403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 22532299 - 22532473
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||  ||||||||||||||| ||||||||| |||||||||||| ||||   ||||||||| ||||| | | ||||||| ||||||||||  ||| |    
T  22532299 tcatgcaatttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattcaacaacatcttaaatattc 22532397  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacag 172  Q
    | | ||  || |||||||||| | |||||||||  |||||||||||||||||||||  |||||  |||||||||||    
T  22532398 attcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 22532473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 42865139 - 42865058
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||| || ||||  ||||||||||    
T  42865139 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacaca 42865058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 22831306 - 22831225
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| |||||||| || |||||||||| |||||||||| ||| ||||||| | ||||||  |||||||||||    
T  22831306 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaagtcatgcgacaca 22831225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 21022830 - 21022888
Alignment:
Q  163 agcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||||||||||||| || ||||| ||||||||||||| |||||||||| |||||||||||    
T  21022830 agcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatc 21022888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21896347 - 21896258
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac--aacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||| |||||||||  ||||||||||||||| ||||||||||  |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  21896347 tcatgcaacttagttaataaacaaacagcaacataggcagtatacaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 6152046 - 6152127
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| |||||||| || |||||||||| |||||||||| ||| ||||||| | || |||  |||||||||||    
T  6152046 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaattcatgcgacaca 6152127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 33797573 - 33797694
Alignment:
Q  24 aacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcat-aa 121  Q
    |||||||||||  |||| |||||| |||||||||||||| ||||||| ||||||||| |||||||||   ||| ||| || |  ||||||||||||| ||    
T  33797573 aacagcaacatatgcagcatacaaacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattcttaagtaatgcataaa 33797672  T
Q  122 acattataatacatcataatca 143  Q
    ||||||||  |||| |||||||    
T  33797673 acattatatcacattataatca 33797694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20847245 - 20847173
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaat 71  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||||   || |||||||||| ||||||||||    
T  20847245 tcatgcagcttagttaaataac-aacagcaacataggcagtacacaaaatcagcatgacataaatatatcaaat 20847173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14295642 - 14295600
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| || |||||    
T  14295642 tcatgcagcttagttaaataacaaacagcaacataggtagtat 14295600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16758679 - 16758721
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  16758679 tcatgcaacttagttaaataacaaacagcaacataggcagtat 16758721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20918634 - 20918676
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||| ||||||| ||||||||    
T  20918634 tcatgcagcttagttaaataacaaactgcaacataggcagtat 20918676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21754075 - 21754117
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  21754075 tcatgcagcttagttaaataacaaacaacaacataggcagtat 21754117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21861661 - 21861572
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||||||||| |||  ||||||||||||||| ||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  21861661 tcatgcagcttagctaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21861572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 22449194 - 22449136
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccat 220  Q
    |||||||||||||| || ||||| ||||||||| ||| |||||||||| ||||||||||    
T  22449194 cagcttcacagattgcagttaacatcttatatatgtcacattactacctaagggtccat 22449136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22921960 - 22921918
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  22921960 tcatgcagcttagttaaataacaaacaacaacataggcagtat 22921918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33681037 - 33681079
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  33681037 tcatgcaacttagttaaataacaaacagcaacataggcagtat 33681079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 45574978 - 45574893
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat---acaacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||| ||||||||   | |||| ||||||||||| ||| ||||| ||| ||| ||||    
T  45574978 tcatgcagcttagttaaataac-aacagcaacataggcagtatgcaaaaacagcatgacataataataccaaatgcaagtcaacaac 45574893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22237657 - 22237746
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||| ||||||||||||||||||||||| |||| |||| ||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  22237657 tcatgaagcttagttaaataacaaacagcgacataggcattatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22237746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35261169 - 35261127
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||  ||||||||||||||| ||||||||    
T  35261169 tcatgcagcttagttaataaacaaacagcaacataggcagtat 35261127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52928061 - 52928019
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| | ||||||    
T  52928061 tcatgcagcttagttaaataacaaacaacaacatagacagtat 52928019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50614208 - 50614167
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta 42  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  50614208 tcatgcagcttagttaataaacaaacagcaacataggcagta 50614167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50622036 - 50621995
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta 42  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  50622036 tcatgcagcttagttaataaacaaacagcaacataggcagta 50621995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 21840794 - 21840878
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||    
T  21840794 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaac 21840878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 22123203 - 22123171
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaaca 33  Q
    |||||||||||||||||||| ||||||||||||    
T  22123203 tcatgcagcttagttaaatagcaaacagcaaca 22123171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 22356163 - 22356079
Alignment:
Q  102 attctttaagtaatgcata-aacattataatacatcataatcaa-catcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| |||||||||| | |||||||||  ||||||||||||| ||||||||  |||||   |||||||||||||| |||||||    
T  22356163 attcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattataattaac 22356079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 22357849 - 22357765
Alignment:
Q  102 attctttaagtaatgcata-aacattataatacatcataatcaa-catcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| |||||||||| | |||||||||  ||||||||||||| ||||||||  |||||   |||||||||||||| |||||||    
T  22357849 attcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagattataattaac 22357765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 5219 - 5036
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||||||||||||| |||||| || | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  5219 tcatgcagcttagttaaataacaaacatcaacataggtattatacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaa 5120  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     |||||| |||||||| ||||||||||||| ||||| ||||||||| |||||| | |||||||| |||||| |||| |||||||    
T  5119 cattcttcaagtaatgtataaacattataacacatcttaatcaacaacaacatattttattcagtttcacatattataattaac 5036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 26911 - 27084
Alignment:
Q  57 ataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtc 156  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||  ||||| ||    
T  26911 ataattatatcaa-ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaacatctc 27009  T
Q  157 ttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaa 232  Q
     ||  |||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  27010 ata-acagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatctctaaacaaaa 27084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 114; Significance: 7e-58; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 174796 - 175051
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||| |   || || |    
T  174796 tcatgcagcttagttaaataacaaacagcaacataggcagtatacaacagcatgacatgattatatcaaattcaattcaacaacatctcaatcattcatt 174895  T
Q  101 tattctttaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtc 198  Q
     ||  || ||||||||||  |||||||||||  || ||||| ||||||  ||||| || || | ||||||||||||| || |||||||||||||||||||    
T  174896 cataattcaagtaatgcaactaaacattatatcacgtcatattcaacactaacatctcataat-agcttcacagatttcagttaacttcttatataggtc 174994  T
Q  199 tcattactacccaagggtccatctccaaacaaaacatgcgacacatattgcattttc 255  Q
    ||||||||||| ||||||||||||| || |||| ||||||||||| || ||||||||    
T  174995 tcattactaccaaagggtccatctctaatcaaatcatgcgacacagatcgcattttc 175051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 124679 - 124801
Alignment:
Q  63 atatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttatt 161  Q
    ||||||| | |||||||||||| | |||  ||| ||| ||||||| |||||||||||| |||||||||  |||||||||||||||||||||  |||||      
T  124679 atatcaattgcaattcatcaacgttttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaa 124778  T
Q  162 cagcttcacagattacaattaac 184  Q
    ||||||||||||||| |||||||    
T  124779 cagcttcacagattataattaac 124801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 32097 - 32280
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaa 99  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||| |||||||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  32097 tcatgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacaacatgacataataatatcaatttcaattcatcaacatcttaggtatacaa 32195  T
Q  100 ttattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     ||||||| |||||||||||||||||||||  ||||||||||||||| | |||| |||||| ||||||||||||||| |||||||    
T  32196 atattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaac 32280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 10514 - 10331
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||| ||||||||| |||||||||| ||||||||     
T  10514 tcatgcagcatagttaattaacaaacagcaacataggcagtatacaacagcatgacataataatatcaatttcaattcaacaacatcttaagtatacaaa 10415  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||||| ||||||||||||| |||||||  |||||||||||| || | |||| |||||| ||||||||||||||| |||||||    
T  10414 tattcttcaagtaatgcataatcattatatcacatcataatcatcaacgacatatcttatacagcttcacagattataattaac 10331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 13527 - 13711
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||  ||||||||||| || ||||||| ||| ||||||||||||||||||||||||    
T  13527 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacatgataatatcaatttcgattcatcaacatcttatgtataca 13625  T
Q  99 attattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |  |||||| |||||||||||||||||||||  ||||||||||||||| | |||| |||||| ||||||||||||||| |||||||    
T  13626 aacattcttcaagtaatgcataaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagattataattaac 13711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 15554 - 15370
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||  |||||||||||||| ||||||| |||||||||||||||||||||||||| |    
T  15554 tcatgcagcttagttaaataacaag-agcaacataggcagtatacaaaacaacatgacataataatatcaatttcaattcatcaacatcttatgtataaa 15456  T
Q  99 attattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | ||||||| |||||||||||||| ||||||  |||||||||||| || |||||| |||||| ||||||||||||||| |||||||    
T  15455 aatattcttcaagtaatgcataaatattatatcacatcataatcatcaacaacatatcttatacagcttcacagattataattaac 15370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 221
Target Start/End: Original strand, 7378 - 7540
Alignment:
Q  57 ataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtc 156  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||   ||||| ||    
T  7378 ataattata-caaattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacgcaaacatctc 7476  T
Q  157 ttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
     || |||| |||| ||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  7477 ata-tcagtttcatagattgcagttaacttcttatataggtctcattactacctaagggtccatc 7540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 22032415 - 22032568
Alignment:
Q  69 aattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttc 168  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||  ||||| || || ||||||||    
T  22032415 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcgta-tcagcttc 22032513  T
Q  169 acagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    ||||||| || |||||||||||||||||||||||||||||| |||||||||||||    
T  22032514 acagattgcagttaacttcttatataggtctcattactacctaagggtccatctc 22032568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 221
Target Start/End: Complemental strand, 18770024 - 18769873
Alignment:
Q  69 aattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttc 168  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||  ||||| || || ||||||||    
T  18770024 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttc 18769926  T
Q  169 acagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  18769925 acagattgcagttaacttcttatataggtctcattactacctaagggtccatc 18769873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 37723933 - 37724176
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||||||||| |   || || |    
T  37723933 tcatgcagcttagttaaataacagacagcaacataggcagtatacaacagcatgacatgattatatcaaattaaattcatcaacatctcaatcattcatt 37724032  T
Q  101 tattctttaagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtc 198  Q
     ||  || ||||||||||  |||||||||||  |||||||| ||||||  ||||| ||  |  |||||||||||||| || |||||||||||||||||||    
T  37724033 cataattcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctc-aaaacagcttcacagattgcagttaacttcttatataggtc 37724131  T
Q  199 tcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||| ||||||| ||||||||||||| || ||||  ||||||||||    
T  37724132 tcaatactaccgaagggtccatctctaatcaaattatgcgacaca 37724176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 69 - 221
Target Start/End: Original strand, 23572178 - 23572329
Alignment:
Q  69 aattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttc 168  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||   ||||| || || ||| ||||    
T  23572178 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactcaaacatctcata-tcaacttc 23572276  T
Q  169 acagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||| ||| || |||||||||||||||||||||||||||||| |||||||||||    
T  23572277 acaaattgcagttaacttcttatataggtctcattactacctaagggtccatc 23572329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 21293060 - 21292835
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa-caacatgacataattatatcaa-attcaa-ttcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||| ||  |||||||||| ||||||| |||||| ||||||||||||||| ||||||    
T  21293060 tcatgcagcttagttaaataacaa-cagcaacataggcagtaaacaaacagtatgacataataatatcaatattcaaattcatcaacatcttaggtatac 21292962  T
Q  98 aattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttc-ttatatagg 196  Q
    |||||||||| |||||||||||||||||||||  |||||||||||| || |||||| |||||| || |||||||||||| ||||||| || |||| || |    
T  21292961 aattattcttcaagtaatgcataaacattatatcacatcataatcatcaacaacatatcttatacaacttcacagattataattaacctcattat-taag 21292863  T
Q  197 tctcattactacccaagggtccatctcc 224  Q
    ||| | | ||||||||||||||| ||||    
T  21292862 tcttaatcctacccaagggtccaactcc 21292835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 23390587 - 23390401
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  23390587 tcatgcagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattc 23390489  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||   |||||||||||||| |||||||    
T  23390488 aaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaac 23390401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 25421562 - 25421748
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||  ||| |    
T  25421562 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacagcatcttaaatattc 25421660  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| ||| |||||||||| | |||||||||  ||||||||||||||||||||   |||||  ||||||||||||||| |||||||    
T  25421661 aattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaac 25421748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 25431424 - 25431610
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||   |||||||||||||| ||||||| | ||| ||| ||||||||||  | | |    
T  25431424 tcatgcatcttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatgttc 25431522  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| ||| |||||||||| | |||||||||  ||||||||||||||||||||   |||||  ||||||||||||||| |||||||    
T  25431523 aattatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaac 25431610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 8286934 - 8286742
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaa----catgacataattatatcaaattcaattcatcaacatcttatgtata 96  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||    ||||||||||| ||||||| | ||||||||||||||||||  ||      
T  8286934 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaataat 8286836  T
Q  97 caattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    |||  |||||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  |||||||||| | || ||||||| ||||    
T  8286835 caaacattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacataatataattaacatctt 8286742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 24493599 - 24493784
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||||||||| ||||| ||||||  |||||||| ||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||  ||| ||    
T  24493599 tcatgcagcttggttaagtaacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattca 24493697  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| |||| ||||| | |||||||||  |||||||||||||||||||||| |||||   |||||||||||||| |||||||    
T  24493698 attatacttcaagtgatgcacataacattatatcacatcataatcaacatcaacatatcttaaatagcttcacagattataattaac 24493784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 22075049 - 22075240
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||| ||||||||||||||||||| ||||||||| || |||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||  ||| |    
T  22075049 tcattcagcttagttaaataacaa-cagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaacaacatcttaaatattc 22075147  T
Q  98 aattattctttaagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    || || |  | |||||||||||||| |||||||  ||||||||||||||| |||||  |||||  |||||||||| |||| ||||||| ||||    
T  22075148 aaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctctt 22075240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 24529250 - 24529428
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||||  |||||    
T  24529250 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtcaacaacatcttaattatac 24529348  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    | | ||   | ||||||||| || |||||||||  |||||||| ||||||||||||  |||||  |||||||||||||||    
T  24529349 attcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagatta 24529428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 9077983 - 9078168
Alignment:
Q  2 catgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||   |||| ||||||||||| ||||||| | ||| ||| |||||||| |  ||||||    
T  9077983 catgcagcttagttaaataac-aacagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtcaacaacatctcaattataca 9078081  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     | ||   | ||||||||| || |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  9078082 ttcataactcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 9078168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 21873385 - 21873521
Alignment:
Q  107 ttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattac 205  Q
    |||||||||||| | |||||||||  |||||||| ||||||| ||||| || ||  |||||||||||||| || ||||||||||||||||||| ||||||    
T  21873385 ttaagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattac 21873483  T
Q  206 tacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||||||||| |||||| || ||||  ||||||||||    
T  21873484 tacccaagggttcatctctaatcaaattatgcgacaca 21873521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 23501273 - 23501212
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23501273 cagcttcacagattgcaattaacttcttatataggtctcattactacccaagggtccatctc 23501212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 13025341 - 13025526
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||||||| ||||||||||||||  |||||||| ||||||||||||  || ||||||||| | ||||||||| ||| ||| ||||||||||  ||| ||    
T  13025341 tcatgcagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattca 13025439  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| || ||||| | | |||||||||  ||||| |||||||||||||||| |||||  || ||||||| |||| |||||||    
T  13025440 attatacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaac 13025526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 13095525 - 13095710
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||||||| ||||||||||||||  |||||||| ||||||||||||  || ||||||||| | ||||||||| ||| ||| ||||||||||  ||| ||    
T  13095525 tcatgcagcatagttaaataacaat-agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattca 13095623  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| || ||||| | | |||||||||  ||||| |||||||||||||||| |||||  || ||||||| |||| |||||||    
T  13095624 attatacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatattataattaac 13095710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 26704257 - 26704338
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||| | || |||| |||||||||||    
T  26704257 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacaca 26704338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 26973990 - 26974071
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||| | || |||| |||||||||||    
T  26973990 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacaca 26974071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 23201559 - 23201641
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattacta-cccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| || |||||||||| ||||||||||||||||| |||||||||||||||| |||||||  ||||||||||    
T  23201559 cagcttcacagattgcagttaacttcttctataggtctcattactaccccaagggtccatctctaaacaaattatgcgacaca 23201641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 1096497 - 1096683
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat---acaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||| ||||||||||  || |||||   | |||||||| ||||||| ||||||||| ||| ||| |||||||| |  |||||    
T  1096497 tcatgcagcttagttaaataac-aacagcaacacaggtagtatgcaaaaacaacataacataataatatcaaatgcaaatcaacaacatctcacatatac 1096595  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||  || |||||||||||| |||||||||  ||||||||||||||||||||   |||||  |||||||| || ||| |||||||    
T  1096596 attcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcataggttataattaac 1096683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21729155 - 21729064
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatctta 90  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||    
T  21729155 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 21729064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21808480 - 21808389
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatctta 90  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||    
T  21808480 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 21808389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 14079340 - 14079420
Alignment:
Q  163 agcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||||||||||| || ||||||||||| ||||||| |||||||||||| ||||||||||| || ||||  ||||||||||    
T  14079340 agcttcacagattgcagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacaca 14079420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21997625 - 21997553
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaat 71  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||   |||||||||||||||| |||||||||    
T  21997625 tcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaaacaacatgacataataatatcaaat 21997553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20027032 - 20026942
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaaca----acatgacataattatatcaaattcaattcatcaacatc 87  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||| |     ||||| ||||| ||||||||| ||||||| |||||||    
T  20027032 tcatgcagcttagttaaataacaaacagcaacataggcagtatccaaaacagttcatgatataataatatcaaatgcaattcaacaacatc 20026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21329588 - 21329500
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatc 87  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||  || ||| | ||||  ||||| ||||||| |||||||||||    
T  21329588 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcataatataacaatatcgaattcaagtcatcaacatc 21329500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19660926 - 19660884
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  19660926 tcatgcagcttagttaaataacaaacagcaacataggcagtat 19660884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22959623 - 22959581
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  22959623 tcatgcagcttagttaaataacaaacagcaacataggcagtat 22959581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 18356367 - 18356488
Alignment:
Q  24 aacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcat-aa 121  Q
    ||||||||||| ||||| |||||| || ||||| ||||| ||||||| ||||||||| |||||||||   ||| ||| ||||  ||||||||||||| ||    
T  18356367 aacagcaacataggcagcatacaaacagcatgatataataatatcaatttcaattcaacaacatcttgaatattcaaatatttcttaagtaatgcataaa 18356466  T
Q  122 acattataatacatcataatca 143  Q
    ||||||||  |||| |||||||    
T  18356467 acattatatcacattataatca 18356488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 21565572 - 21565659
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacat 86  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||    
T  21565572 tcatgcagcttagttaaataacaaatagcaacataggcagtatccaaatcatcatgatataacaatatcgaatgcaagtcatcaacat 21565659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36314607 - 36314649
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| || |||||    
T  36314607 tcatgcagcttagttaaataacaaacagcaacataggtagtat 36314649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26012126 - 26012054
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaat 71  Q
    |||||||||||||||||  ||||||||||||||| |||||||| |||  |||||||| ||||  |||||||||    
T  26012126 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaagcaacatgatataacaatatcaaat 26012054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 22412337 - 22412388
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaa 183  Q
    |||||||||||||||||||||  |||||  ||||||||||||||| ||||||    
T  22412337 acatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 22412388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 20910866 - 20910800
Alignment:
Q  24 aacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatctt 89  Q
    ||||||||||| | ||| |||||| || ||||||||||| ||||||| ||||||||| |||||||||    
T  20910866 aacagcaacatagacagcatacaaacagcatgacataataatatcaatttcaattcaacaacatctt 20910800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21502247 - 21502205
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||  ||||||||||||||| ||||||||    
T  21502247 tcatgcagcttagttaataaacaaacagcaacataggcagtat 21502205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22144079 - 22144168
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||||||||||||||||||| ||| |||||| || |||||  | |||||||||| ||||  ||||||| | ||| ||| ||||||||    
T  22144079 tcatgcagcttagttaaataacagacatcaacataggtagtatgcaaaacaacatgatataacaatatcaattgcaaatcaacaacatct 22144168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22412214 - 22412302
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||| |||||||||||||||| |  | |||||| ||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||    
T  22412214 tcatgtagcttagttaaataacgataa-caacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 22412302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 23512301 - 23512379
Alignment:
Q  165 cttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||| ||||| || | |||||||||||||||||  | ||||||||||||||||| ||| || ||||  ||||||||||    
T  23512301 cttcaaagattgcagtaaacttcttatataggtcataatactacccaagggtccacctctaatcaaattatgcgacaca 23512379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 21366594 - 21366537
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||  || ||||| ||||| ||||||| |||||||||| |||||||||    
T  21366594 cagcttcacagatctcagttaacatcttaaataggtcacattactacctaagggtcca 21366537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 22107354 - 22107273
Alignment:
Q  109 aagtaatgcataa-acattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    ||||||||||||| | ||||||  ||||||||||||||| |||||   ||||  ||||||||||||||| ||||||| ||||    
T  22107354 aagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctctt 22107273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 221
Target Start/End: Original strand, 12857 - 13008
Alignment:
Q  69 aattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttc 168  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||  |||||| || |||| ||||||    
T  12857 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactccaacatctcatatt-agcttc 12955  T
Q  169 acagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||| ||| || |||||||||||||||||||||||||||||| |||||||||||    
T  12956 acaaattgcagttaacttcttatataggtctcattactacctaagggtccatc 13008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 47025 - 47200
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaat 100  Q
    ||||| ||||||||||||||||||||| |||||| |||||| |||| || ||||||||||| ||||||| |||||||||||||||||||||||||||||     
T  47025 tcatgtagcttagttaaataacaaacaacaacataggcagtttacagcagcatgacataataatatcaatttcaattcatcaacatcttatgtatacaaa 47124  T
Q  101 tattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    ||||||  |||||||||||||||||||||  ||||||||| || || |||||| |||||| |||||||||||||||    
T  47125 tattctccaagtaatgcataaacattatatcacatcataaacatcaacaacatatcttatacagcttcacagatta 47200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 221
Target Start/End: Original strand, 1975 - 2126
Alignment:
Q  69 aattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttc 168  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||   ||||| || || ||||||||    
T  1975 aattcaattcatcaacatcttatgtatacaattattcttcaagtaatgcataaacattataatacatcatatccaacgcaaacatctcata-tcagcttc 2073  T
Q  169 acagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  2074 acagattgcagttaacttcttatataggtctcattactacctaagggtccatc 2126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 69 - 221
Target Start/End: Complemental strand, 21826 - 21675
Alignment:
Q  69 aattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttc 168  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||  ||||| || ||  |||||||    
T  21826 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttc 21728  T
Q  169 acagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||||||| || ||||| |||||||||||||||||||||||| |||||||||||    
T  21727 acagattgcagttaacatcttatataggtctcattactacctaagggtccatc 21675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 69 - 221
Target Start/End: Complemental strand, 29718 - 29567
Alignment:
Q  69 aattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttc 168  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||  ||||| || ||  |||||||    
T  29718 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttc 29620  T
Q  169 acagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||||||| || ||||| |||||||||||||||||||||||| |||||||||||    
T  29619 acagattgcagttaacatcttatataggtctcattactacctaagggtccatc 29567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 856166 - 856385
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca-tgac-ataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||||| ||||||| ||||||||  |||||||| |||||  |||||||||| | |  ||||||||| ||| ||||||||| ||||||||||||||||||    
T  856166 tcatgcaacttagttgaataacaat-agcaacataggcagattacaacaacaatcatgataattataccaa-ttcaattcaacaacatcttatgtataca 856263  T
Q  99 attattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtc 198  Q
    |||| |||| ||||||| ||||||||||||||||||||||| || |||  ||||| || || | ||||||||||||| || |||||||||||||||||||    
T  856264 attaatcttcaagtaatacataaacattataatacatcatattcgacacaaacatctcata-taagcttcacagattgcagttaacttcttatataggtc 856362  T
Q  199 tcattactacccaagggtccatc 221  Q
    ||||||||||| |||||||||||    
T  856363 tcattactacctaagggtccatc 856385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 20698526 - 20698341
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||   |||| |||| ||||||| | ||||||||||||||||||| ||| |    
T  20698526 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttatatattc 20698428  T
Q  98 aattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||||||||||||||  |||||||||||||| ||||||  ||||   ||||||||||||||| |||||||    
T  20698427 aaatattcttcaagtaatgcataaacattatatcacatcataatcaacttcaacacatcttgaacagcttcacagattataattaac 20698341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 13442304 - 13442490
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  13442304 tcatgcagcttagttaaataacaa-cggcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattc 13442402  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  13442403 aaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 13442490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 17487886 - 17488072
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||| || | |||||||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  17487886 tcatgcagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 17487984  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||||| |||||||||  |||||||||||||||||||||  |||||  ||| ||||||||||| |||||||    
T  17487985 aaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagattcacagattataattaac 17488072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 14972884 - 14973070
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||| ||||   ||||||||| ||||||||| ||| ||| |||||||| || |||||    
T  14972884 tcatgcagcttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacatctcatatatac 14972982  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||  || |||||||||||| |||||||||  |||||||||||||||||||||  |||||  |||||||| |||||| |||||||    
T  14972983 attcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaac 14973070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 17499368 - 17499554
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| |||||| || | |||||||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  17499368 tcatgcagcttagttaaataacaa-cagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 17499466  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||||| |||||||||  |||||| ||||||||||||||  |||||  ||| |||||| |||| |||||||    
T  17499467 aaatattcttcaagtaatgcatataacattatatcacatcaaaatcaacatcaacacatcttaaacagattcacaaattataattaac 17499554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 184
Target Start/End: Complemental strand, 14576915 - 14576738
Alignment:
Q  9 cttagttaaataacaaacagcaacatgggcagtata--caacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattct 106  Q
    |||||||||||||||| ||||||||| | |||||||  ||||| ||||||||||| ||||||| | ||| ||| ||||||||||  ||| ||||||| ||    
T  14576915 cttagttaaataacaa-cagcaacatagacagtataaacaacagcatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattatact 14576817  T
Q  107 ttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | |||||||||||| |||||||||  |||||||||||||||||||||  |||||  || |||||||||||| |||||||    
T  14576816 tcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacaacttcacagattataattaac 14576738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 12399239 - 12399430
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||   || ||||||||||| ||||||||| ||||||| ||||||||||  ||| |    
T  12399239 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaaatattc 12399337  T
Q  98 aattattctttaagtaatgcataa-acattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    || || |  | ||||||||||||| ||||||||  ||||||||||||||| |||||  |||||   |||||||||||||| | ||||| ||||    
T  12399338 aaataattctcaagtaatgcataagacattatatcacatcataatcaacaacaacacatcttaaatagcttcacagattatagttaacctctt 12399430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 14179572 - 14179687
Alignment:
Q  109 aagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattacta 207  Q
    |||||||||||||| |||||||  ||||||||||||||| |||||  |||||  ||||||||||||||| ||||||||||||||||||||| || |||||    
T  14179572 aagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatacta 14179671  T
Q  208 cccaagggtccatctc 223  Q
    |||| |||||||||||    
T  14179672 cccaggggtccatctc 14179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 24153299 - 24153115
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||| |  |||||||| || |||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||  ||| ||    
T  24153299 tcatgcagcttagttaaataacgat-agcaacataggtagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattca 24153201  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaa 183  Q
    ||||| ||| || ||||||| | ||||| |||  |||||||||||||||||||||  |||||  ||||||||||||||| ||||||    
T  24153200 attatacttcaaataatgcacataacataatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 24153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 26686917 - 26687103
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||| |||||||||||| ||||   ||||||||| ||||||| | ||| ||| || |||||||  ||| |    
T  26686917 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 26687015  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     ||||| ||| |||||||||| | |||||||||  ||| |||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  26687016 cattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaac 26687103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 43840962 - 43841148
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||| | |||||||||| ||||   ||||||||| ||||||| | ||| ||| || |||||||  ||| |    
T  43840962 tcatgcagcttagttaaataacaa-caacaacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 43841060  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| ||| |||||||||| | |||||||||  ||| |||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  43841061 aattatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaac 43841148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 18438564 - 18438742
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||| ||||   ||| ||||| ||||||||| ||| ||| ||||||||| | |||||    
T  18438564 tcatgtagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacatcttttttatac 18438662  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    | | ||   | |||||||||||| |||||||||  |||||||| ||||||||||||  |||||  |||||||||||||||    
T  18438663 attcatatctcaagtaatgcatataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagatta 18438742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 23083452 - 23083266
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||| ||||   ||||||||| ||||||| | ||| ||| ||||||||||  ||| |    
T  23083452 tcatgcagcttagttaaataacaat-agcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtcaacaacatcttaaatattc 23083354  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||| | |||  ||||||||| | |||||||||  ||||||||||||| |||||||  |||||  ||||||||||||||  |||||||    
T  23083353 aattttacttctagtaatgcacataacattatatcacatcataatcaatatcaacacatcttaaacagcttcacagattgtaattaac 23083266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 17525109 - 17524999
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaa 231  Q
    |||||||| ||||||| ||||| || ||  |||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  17525109 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaa 17525011  T
Q  232 acatgcgacaca 243  Q
      ||||||||||    
T  17525010 ttatgcgacaca 17524999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 23077435 - 23077325
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaa 231  Q
    ||||||||| |||||| ||||| || ||  |||||||||| |||||| | ||||||| |||||||||||||||||||| ||||||||||||| || ||||    
T  23077435 acatcataaccaacataaacatttcataa-cagcttcacaaattacagtaaacttctcatataggtctcattactacctaagggtccatctctaatcaaa 23077337  T
Q  232 acatgcgacaca 243  Q
      ||||||||||    
T  23077336 ttatgcgacaca 23077325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 14572619 - 14572804
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac--aacaacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||| ||||||||||| | ||||||||  |||| ||||||||||| ||||||| |   | ||| ||||||||||  ||| ||    
T  14572619 tcatgcagcttagttaaataac-aacagcaacatagacagtatacaaaacagcatgacataataatatcaattgagagtcaacaacatcttaaatattca 14572717  T
Q  99 attattctttaagtaatg-cataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| || |||||  | ||||||||||  ||||||||| |||||| ||||  |||||  || ||||||| |||| |||||||    
T  14572718 attatacttcaaataatgaaaaaaacattatatcacatcataaacaacataaacaaatcttaaacaacttcacaaattataattaac 14572804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 42386440 - 42386592
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||   |||| ||||||||||  ||||||||| ||| ||| |||||||| |  ||| |    
T  42386440 tcatgcagtttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaaatattc 42386538  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaa 150  Q
    | | ||  || ||| |||||||| |||||||||  |||||||||||||||||||    
T  42386539 attcataattcaagcaatgcatataacattatatcacatcataatcaacatcaa 42386592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 11424850 - 11424668
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac--aacaacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||  |||| ||||||||||  |||||||   |||   |||||||||| |  ||| ||    
T  11424850 tcatgcagcttagttaaataac-aacagcaacataggcagtatacaaaacagcatgacataacaatatcaatagcaa---atcaacatctcaattatgca 11424755  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     | ||  || ||||||||| || |||||||||  ||||||||| |||| ||||||  |||||  ||||||||||||||| |||||||    
T  11424754 ttcataattcaagtaatgcgtataacattatatcacatcataaacaacttcaacacatcttaaacagcttcacagattaaaattaac 11424668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 25476476 - 25476290
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||| |||||||||||| ||||| ||||||||  || ||||||||| ||||   ||||||||| ||||||||| ||| ||| |||||||| | ||||||    
T  25476476 tcatgtagcttagttaaaaaacaa-cagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatac 25476378  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||  || |||||||||  | |||||||||  ||||||| |||| ||||||||  |||||  ||||||||||||||  |||||||    
T  25476377 attcataattcaagtaatgcgcataacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagattgtaattaac 25476290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 40213811 - 40213626
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtataca---acaacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||| |||||||||||||||||| || |||||  | |||||||||   ||| ||||||||||| ||||||||| ||| ||| |||||||| |  |||||    
T  40213811 tcatgtagcttagttaaataacaa-catcaacacag-cagtatacataaacatcatgacataataatatcaaatgcaagtcaacaacatctcaattatac 40213714  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||  |  ||||||||| || |||||||||  |||||||||||||||||||||  |||||  |||||| |||||||| |||||||    
T  40213713 attcataatccaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagctttacagattataattaac 40213626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Original strand, 23408581 - 23408704
Alignment:
Q  119 taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcc 218  Q
    |||||||||||  |||||||| ||||||  ||||| || ||  |||||||||||||| || ||||||||| | ||||||  || ||||||||||||||||    
T  23408581 taaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtcc 23408679  T
Q  219 atctccaaacaaaacatgcgacaca 243  Q
    ||||| || ||||  ||||||||||    
T  23408680 atctctaatcaaattatgcgacaca 23408704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12174350 - 12174308
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  12174350 tcatgcagcttagttaaataacaaacagcaacataggcagtat 12174308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 15470954 - 15471043
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  15470954 tcatgcagcttagttaaataacagacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 15471043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32307707 - 32307749
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  32307707 tcatgcagcttagttaaataacaaacagcaacataggcagtat 32307749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49668167 - 49668125
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  49668167 tcatgcagcttagttaaataacaaacagcaacataggcagtat 49668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14234517 - 14234605
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatc 87  Q
    |||||||||||||||||||||||| ||||||||| |||||||| |||  || ||||| ||||  ||||| ||| ||| |||||||||||    
T  14234517 tcatgcagcttagttaaataacaagcagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 14234605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 14878464 - 14878352
Alignment:
Q  131 tacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactaccca-agggtccatctccaaaca 229  Q
    ||||||||| ||||||| ||||| || || | ||||||||||||| || ||||||||||||||| ||| |||||||||| |  ||||||||||| || ||    
T  14878464 tacatcatattcaacattaacatttcataat-agcttcacagattgcagttaacttcttatataagtcacattactacctagggggtccatctctaatca 14878366  T
Q  230 aaacatgcgacaca 243  Q
    ||  ||||||||||    
T  14878365 aattatgcgacaca 14878352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 15877727 - 15877676
Alignment:
Q  191 tataggtctcattactacccaagggtccatctccaaacaaaacatgcgacac 242  Q
    ||||||||||||||||||||||||||||||||| || ||||  |||||||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacac 15877676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9512950 - 9512992
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  9512950 tcatgcagcttagttaaacaacaaacagcaacataggcagtat 9512992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 9520925 - 9520967
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  9520925 tcatgcagcttagttaaacaacaaacagcaacataggcagtat 9520967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13210418 - 13210376
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  13210418 tcatgcagcttagttaaataacaaatagcaacataggcagtat 13210376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 16909941 - 16909999
Alignment:
Q  163 agcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||||||||||||| || ||||| |||| |||||||| |||||||||| |||||||||||    
T  16909941 agcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatc 16909999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27165277 - 27165366
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||||||||||||||||||||||||||| || | ||||||  | |||||||||| |||   ||||||||| ||| ||||||| ||||    
T  27165277 tcatgcagcttagttaaataacaaacagcaatatagacagtatgcaaaacaacatgatataccaatatcaaatgcaagtcatcaatatct 27165366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52523820 - 52523778
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  52523820 tcatgcagcttagttaaataacaaacaacaacataggcagtat 52523778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 12496445 - 12496502
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||| || ||||| ||||| ||||||| |||||||||| |||||||||    
T  12496445 cagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtcca 12496502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28194720 - 28194753
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacat 34  Q
    ||||||||||||||||||||||||||||||||||    
T  28194720 tcatgcagcttagttaaataacaaacagcaacat 28194753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 15051707 - 15051787
Alignment:
Q  163 agcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||||||| ||| || ||||| ||||||||||||| || ||||||| ||||||||||| | || |||  |||||||||||    
T  15051707 agcttcacaaattgcagttaacatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacaca 15051787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 15060483 - 15060563
Alignment:
Q  163 agcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    ||||||||||||| || ||| | ||||||||||||| || ||||||| ||||||||||| | || |||  |||||||||||    
T  15060483 agcttcacagattgcagttaccatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacaca 15060563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37251259 - 37251216
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtata 44  Q
    |||||||||||||||||  ||||||||||||||| |||||||||    
T  37251259 tcatgcagcttagttaataaacaaacagcaacataggcagtata 37251216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16097358 - 16097396
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggca 39  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  16097358 tcatgcagcttagttaaataacaaacaacaacataggca 16097396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16103810 - 16103852
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||    
T  16103810 tcatgcagcttagttaaacaacgaacagcaacataggcagtat 16103852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36166625 - 36166712
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac--aacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||||||| |||||| |||   |||||||||  |||| ||||||||||| ||||||||| ||| ||| ||||||||    
T  36166625 tcatgcagcttagttaaataac-aacagcgaca-cagcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 36166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 53301634 - 53301561
Alignment:
Q  9 cttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcat 80  Q
    |||||||||||||||||||||||||| | ||||||  | |||||||||| ||||  ||||||||| ||| ||||    
T  53301634 cttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatcaaatgcaagtcat 53301561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 11862981 - 11863038
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||| ||| |||| ||||| ||||||| ||||| |||| |||||||||    
T  11862981 cagcttcacagatttcaaataacatcttaaataggtcacattaatacctaagggtcca 11863038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 22110443 - 22110402
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta 42  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  22110443 tcatgcagcttagttaataaacaaacagcaacataggcagta 22110402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24340814 - 24340746
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatc 67  Q
    ||||||||||||||||| |||||| |||||||||  |||||||  |||||| ||||| ||||| |||||    
T  24340814 tcatgcagcttagttaattaacaatcagcaacatatgcagtatgcacaacatcatgatataataatatc 24340746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43925988 - 43926029
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta 42  Q
    |||||||||||||||||  ||||||||||||||| |||||||    
T  43925988 tcatgcagcttagttaataaacaaacagcaacataggcagta 43926029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 9707742 - 9707658
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||    
T  9707742 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaacagcatgacataataatatcaaatacaagtcaacaac 9707658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 17672653 - 17672737
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| |||| ||||||  |||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||    
T  17672653 tcatgcagcttagttaaataac-aacaacaacat-agcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaac 17672737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 29172718 - 29172634
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||    
T  29172718 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaac 29172634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43550614 - 43550529
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||  | |||||||||  ||||||| |||   |||||||||||||| ||||||||| ||| ||| ||||    
T  43550614 tcatgcagcttagttaaataatga-cagcaacatatgcagtatgcaaaaacaacatgacataataatatcaaatgcaagtcaacaac 43550529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 53070788 - 53070704
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| |||||||||||   ||||||||   ||||||| |||||||| ||||||||| ||| ||| ||||    
T  53070788 tcatgcagcttagttaaataac-aacagcaacat-aacagtatacaaaaacaacaagacataataatatcaaatgcaagtcaacaac 53070704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 4742 - 4919
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||| |||||||||||| ||||   |||||||| || ||||| | ||||||||||| |||||||||||||    
T  4742 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatac 4840  T
Q  98 aattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    || ||||||| |||||| ||||||||||||||  ||||||||||||||| |||||| |||||| || ||||||||||||    
T  4841 aaatattcttcaagtaaggcataaacattatatcacatcataatcaacaacaacatatcttatacaacttcacagatta 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 13 - 143
Alignment:
Q  46 aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcataaacattataatacatcataatcaac 145  Q
    |||| |||||||||| || ||||| | ||||||||||| ||||||||||||||| ||||||| |||||| ||||||||||||||  ||||||||||||||    
T  13 aacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaac 112  T
Q  146 atcaacatgtcttattcagcttcacagatta 176  Q
    | |||||| |||||| || ||||||||||||    
T  113 aacaacatatcttatacaacttcacagatta 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 13241 - 13427
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  13241 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 13339  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||||| |||||||||  |||||||||||||||||||||  |||||  |||||||||| |||| |||||||    
T  13340 aaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacaaattataattaac 13427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 1881 - 2067
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  1881 tcatgcagcttagttaaataacaa-cagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattc 1979  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||   |||||||||||||| |||||||    
T  1980 aaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagattataattaac 2067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 1139 - 949
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaa---catgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||| |||||||||||| ||   ||||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  1139 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 1041  T
Q  98 aattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    || |||| || |||||||||||||||||||||  ||||||||||||||   ||||  |||||  |||||||| |||||| ||||||| ||||    
T  1040 aaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctctt 949  T

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Target: scaffold0292 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 3500 - 3686
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||| |||||||||||||||| || |||||||| |||||||||||| ||||   ||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  3500 tcatgtagcttagttaaataactaa-agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 3598  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || ||||||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  |||||||| |||||| |||||||    
T  3599 aaatattcttcaagtaatgcaaataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaac 3686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 373 - 558
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaa--catgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||  ||||| |||||||||||| |   |||||| |||| ||||||| |  || ||| ||||||||||  ||| |     
T  373 tcatgcagcttagttaaataacaa-caataacataggcagtatacaaaatagcatgacgtaataatatcaattggaagtcaacaacatcttaaatattcg 471  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  |||||||| | |||| |||||||    
T  472 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatatattataattaac 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 168069 - 167879
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaa---catgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| || |||||| |||||||||||| ||   ||||||||||| ||||||| | ||||||||||||||||||  ||| |    
T  168069 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattc 167971  T
Q  98 aattattctttaagtaatgcataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    || |||| || |||||||||||||||||||||  ||||||||||||||   ||||  |||||  |||||||| |||||| ||||||| ||||    
T  167970 aaatattattcaagtaatgcataaacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctctt 167879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 51943 - 52129
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||| ||||   ||||||||| ||||||| | ||| ||| || |||||||  ||| |    
T  51943 tcatgcagcttagttaaataacaa-cagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattc 52041  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    |||||| ||| |||||||||| | |||||||||  ||| ||||||| |||||||||  |||||  ||||||||||||||| |||||||    
T  52042 aattatacttcaagtaatgcacataacattatatcacaacataatctacatcaacacatcttaaacagcttcacagattataattaac 52129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 24394 - 24206
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa----caacatgacataattatatcaaattcaattcatcaacatcttatgtata 96  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||    || ||||||||||  ||||||| | ||||||||||||||||||  |||     
T  24394 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatatt 24296  T
Q  97 caattattctttaagtaatgcata-aacattataatacatcataa-tcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||| ||||||| |||||||||| | |||||||||  ||||||||| ||||||||||||  |||||  ||||||||||||||| |||||||    
T  24295 caaatattcttcaagtaatgcacataacattatatcacatcataattcaacatcaacacatcttaaacagcttcacagattataattaac 24206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 34838 - 34770
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaa 230  Q
    |||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  34838 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaaacaa 34770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 3241 - 3056
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| |  ||||||    
T  3241 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 3143  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     | ||  || |||||||||||| |||||||||  ||||||||||||||||||||   |||||  ||||||||||| ||| |||||||    
T  3142 ttcataattcaagtaatgcatataacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaggttataattaac 3056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 38791 - 38976
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||| |||||||||||  |||||||| ||||||||||||  || ||||||||||| ||||||||| ||| | | ||||||||||  ||| ||    
T  38791 tcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaaataaacaacatcttaaatattca 38889  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  38890 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 38976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 32972 - 33149
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||| |||||||||||  |||||||| ||||||||||||  || ||||||||||| ||||||||| ||| | | ||||||||||  ||| ||    
T  32972 tcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattca 33070  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    ||||| ||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  |||||||||||||||    
T  33071 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 33149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 4879 - 5057
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||   || ||||||||||| ||||||||| ||||||| |||||||||| |||| |    
T  4879 tcatgcagattagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaagtattc 4977  T
Q  98 aattattctttaagtaatgcat-aaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    || || |  | ||||||||||| ||||||||||  ||||||||||||||| |||||  |||||  |||||||||||||||    
T  4978 aaataattctcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagatta 5057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 17308 - 17120
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaa-----catgacataattatatcaaattcaattcatcaacatcttatgtat 95  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||     ||||||||||| ||||||||| ||| ||| |||||||| | ||||    
T  17308 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtat 17210  T
Q  96 acaattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||| | ||  || ||||||||| |  |||||||||  ||||||||||||||||||||| ||||||  |||||| |||||||| |||||||    
T  17209 acattcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacgtcttaaacagctttacagattataattaac 17120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 14005 - 13944
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||||||||||||| || ||||| || ||||||||||   ||||||||||||||||| ||||    
T  14005 cagcttcacagatttcagttaacatcctatataggtcattttactacccaagggtccttctc 13944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 6215 - 6026
Alignment:
Q  1 tcatgcagcttagttaaataacaa--acagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtat 95  Q
    ||||||||||||||||||||||||  ||| |||||| || ||||||||| ||||   |||||| || ||||||| | ||||||||||||||||||  |||    
T  6215 tcatgcagcttagttaaataacaacaacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattcatcaacatcttaaatat 6116  T
Q  96 acaattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     ||| ||||||| |||||||||| | |||||||||  |||||||||||||||||||||  |||||  ||||||||||  ||| |||||||    
T  6115 tcaaatattcttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacattttataattaac 6026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 189
Target Start/End: Original strand, 20946 - 21132
Alignment:
Q  7 agcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattat 103  Q
    ||||||||||| |||||| ||||||||| |||| ||| |||   |||||||||||||| ||||||| | ||||||| ||||||||||| ||| ||| | |    
T  20946 agcttagttaattaacaatcagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattcaacaacatcttatatattcaaatgt 21045  T
Q  104 tctttaagtaatgcat-aaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    |||  ||||||||||| ||||||||||  |||||||||||| ||||||||  |||||  ||||||||||| ||| ||||||| ||||    
T  21046 tctacaagtaatgcataaaacattatatcacatcataatcagcatcaacacatcttaaacagcttcacaggttataattaacatctt 21132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 340038 - 339855
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||  || |||||| ||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| | |||||||    
T  340038 tcatgcagcttagttaaataaca--caacaacataggcagtatacaaaacaacatgacataataatatcaaat-caagtcaacaacatctcaagtataca 339942  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     | ||  || ||||||||  || |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  339941 ttcataattcaagtaatgtgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 339855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 71353 - 71474
Alignment:
Q  24 aacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcat-aa 121  Q
    ||||||||||| ||||| |||||| || |||||||||||  |||||| ||||||||| |||||||||  |||| ||| || |  ||| ||||||||| ||    
T  71353 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataattcttaggtaatgcataaa 71452  T
Q  122 acattataatacatcataatca 143  Q
    ||||||||  |||| |||||||    
T  71453 acattatatcacattataatca 71474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 39507 - 39692
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |  ||||||    
T  39507 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 39605  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     | ||  || |||||||||| | |||||||||  |||||||||||||||||||||  |||||  |||||||| |||||| |||||||    
T  39606 ttcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaac 39692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 8914 - 8824
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||||||| ||||||||||||| || ||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8914 acatcatattcaacatcaacatttcataa-cagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccatctc 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 75305 - 75120
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |  ||||||    
T  75305 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatataca 75207  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     | ||  || |||||||||| | |||||||||  |||||||||||||||||||||  |||||  |||||||| |||||| |||||||    
T  75206 ttcataattcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaac 75120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 18402 - 18515
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaa 231  Q
    |||||||||||||||| ||||| || ||  |||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  18402 acatcataatcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaa 18500  T
Q  232 acatgcgacacatat 246  Q
      |||||||||||||    
T  18501 ttatgcgacacatat 18515  T

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Target: scaffold0131 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 36595 - 36730
Alignment:
Q  109 aagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattact 206  Q
    ||||||||||  |||||||||||  |||||||| ||||||  ||||| || ||  |||||||||||||| || ||||||||||| |||||||||||||||    
T  36595 aagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttaaataggtctcattact 36693  T
Q  207 acccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||| |||| ||||||| |||||||||||    
T  36694 acccaagggtccttctctaaacaaatcatgcgacaca 36730  T

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Target: scaffold0122 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 26156 - 25970
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||   ||||||||| |||||||||  |||||| |||| ||| | ||||||    
T  26156 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaacaacgtctcaagtatac 26058  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||  || ||||||||| |  |||||||||  |||||||||||||||||||||  |||||  |||||||| |||||| |||||||    
T  26057 attcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagattataattaac 25970  T

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Target: scaffold0122; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44798 - 44709
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||||||    
T  44798 tcatgcagcttagttaaataac-aacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 44709  T

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Target: scaffold0026 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 25926 - 26111
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaa--catgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||| ||||||||||||||||||  |||||||| |||||||||||| |   ||||||||||| ||||||||| ||| | | |||||||| |  ||| ||    
T  25926 tcatgaagcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattca 26024  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| |||||||||||  |||||||||  ||||||||||||||||||||   |||||  ||||||||||||||| |||||||    
T  26025 attatacttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagattataattaac 26111  T

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Target: scaffold0026; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 39888 - 40073
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaa--catgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||| ||||||||||||||||||  |||||||| |||||||||||| |   ||||||||||| ||||||||| ||| | | |||||||| |  ||| ||    
T  39888 tcatgaagcttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattca 39986  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| |||||||||||  |||||||||  ||||||||||||||||||||   |||||  |||||||||| |||| |||||||    
T  39987 attatacttcaagtaatgcatttaacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaattataattaac 40073  T

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Target: scaffold0139 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 109 - 252
Target Start/End: Original strand, 20120 - 20264
Alignment:
Q  109 aagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattact 206  Q
    ||||||||||  |||||||||||  |||||||| ||||||  ||||| || ||  ||||||||||| || || |||||||||||||||||||||||||||    
T  20120 aagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacaggttgcagttaacttcttatataggtctcattact 20218  T
Q  207 acccaagggtccatctccaaacaaaacatgcgacacatattgcatt 252  Q
    ||||||||||||||| | || |||| ||||||||||| ||| ||||    
T  20219 acccaagggtccatccctaatcaaatcatgcgacacagattacatt 20264  T

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Target: scaffold0139; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38346 - 38389
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtata 44  Q
    |||||||||||||||||  ||||||||||||||| |||||||||    
T  38346 tcatgcagcttagttaatgaacaaacagcaacataggcagtata 38389  T

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Target: scaffold0121 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 8620 - 8438
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||||||||||||||    ||||||| ||||||||  | |||| ||||||||||| ||||||| | ||| ||| || |||||||  ||| ||    
T  8620 tcatgcagcttagttaaataaca----gcaacataggcagtatcaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattca 8525  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| |||||||||| | |||||||||  ||| |||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  8524 attatacttcaagtaatgcacataacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagattataattaac 8438  T

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Target: scaffold0908 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 3277 - 3103
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||| ||||   ||| ||||| |||||||||  |||||| |||||||| | ||||||    
T  3277 tcatgcagcttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaacaacatctcaagtatac 3179  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacag 172  Q
    | | ||  || ||||||||| |  |||||||||  |||||||||||||||||||||  |||||  |||||||||||    
T  3178 attcataattcaagtaatgcgtttaacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 3103  T

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Target: scaffold0490 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 1982 - 2160
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||||||||||||||| |||||| |||| |||| ||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||  ||| |    
T  1982 tcatgcagcttagttaattaacaa-cagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattcaacaacatcttaaatattc 2080  T
Q  98 aattattctttaagtaatgcat-aaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    ||  ||| || ||||||||||| ||||||||||   |||||||||||||| |||||| || ||| |||||| ||| ||||    
T  2081 aaacattattcaagtaatgcataaaacattatatctcatcataatcaacaacaacatatcatatacagctttacatatta 2160  T

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Target: scaffold0231 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22913 - 23090
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||    |||||||||| ||||   ||||||||| ||||||||| ||| ||| ||||||||||  ||| |    
T  22913 tcatgcagcttagttaaataacaa-cagcaacacac-cagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattc 23010  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    |||||| ||| |||||||||| | |||||||||  ||||| |||||||||||||||  |||||  |||||||||||||||    
T  23011 aattatacttcaagtaatgcacataacattatatcacatcgtaatcaacatcaacacatcttaaacagcttcacagatta 23090  T

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Target: scaffold0004 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 69987 - 70068
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || ||||  ||||||||||    
T  69987 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacaca 70068  T

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Target: scaffold0198 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 121 - 221
Target Start/End: Original strand, 23995 - 24094
Alignment:
Q  121 aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccat 220  Q
    |||||||||  |||||||| ||||||  ||||| |||||  |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  23995 aacattatatcacatcatattcaacactaacatctcttaa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccat 24093  T

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Target: scaffold0023 (Bit Score: 57; Significance: 7e-24; HSPs: 6)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 243
Target Start/End: Complemental strand, 38525 - 38326
Alignment:
Q  44 acaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcata-aacattataatacatcataatc 142  Q
    ||||||||||||| |  | ||||||| |||| |||| ||||||||||   || |||| ||   |||||||||||| | ||| |||||  |||||||| ||    
T  38525 acaacaacatgacttcttaatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatcacatcatattc 38426  T
Q  143 aacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacac 242  Q
    ||||| ||||| || ||  |||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||| ||| || ||||  |||||||||    
T  38425 aacattaacatttcataa-cagcttcacagattgcaactaacttcttatataggtcacattactacccaagggtccaactctaatcaaattatgcgacac 38327  T

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Target: scaffold0023; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 219
Target Start/End: Complemental strand, 23711 - 23538
Alignment:
Q  45 caacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcata-aacattataatacatcataatca 143  Q
    |||||||||||| |  | ||||||| |||| |||| ||||||||||   || |||| ||   |||||||||||| | ||| |||||  |||||||| |||    
T  23711 caacaacatgacttcttaatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatcacatcatattca 23612  T
Q  144 acatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||| ||||| || ||  |||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||    
T  23611 acattaacatttcataa-cagcttcacagattgcaactaacttctt-tataggtcacattactacccaagggtcca 23538  T

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Target: scaffold0023; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 100404 - 100493
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||  || ||||| ||||| ||||| ||| ||| ||| ||||||||    
T  100404 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataataatatcgaatgcaaatcaacaacatct 100493  T

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Target: scaffold0023; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 119905 - 119947
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  119905 tcatgcagcttagttaaataacaaacagcaacataggcagtat 119947  T

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Target: scaffold0023; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40265 - 40224
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta 42  Q
    ||||||||||||||||||||| |||||||||||| |||||||    
T  40265 tcatgcagcttagttaaataataaacagcaacataggcagta 40224  T

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Target: scaffold0023; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 101529 - 101571
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||| |||||||| |||||| ||||||||    
T  101529 tcatgcagcttagttaaacaacaaacaacaacataggcagtat 101571  T

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Target: scaffold0297 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 15626 - 15536
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||||||| ||||||| ||||| || ||  |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  15626 acatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctc 15536  T

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Target: scaffold0080 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 39943 - 40128
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    |||||||||||| |||||||||||  |||||||| ||||||||||||  |||||||||||||| ||||||||| ||  |||  |||||||||  |||       
T  39943 tcatgcagcttaattaaataacaat-agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcatgtcaataacatcttaaatatttg 40041  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    ||||| ||| |||||||||| | |||||||||  |||||||||||||||||||||  || ||   |||||||||||||| |||||||    
T  40042 attatacttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatcataaagagcttcacagattataattaac 40128  T

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Target: scaffold0080; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 18584 - 18525
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  18584 cagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatc 18525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 13141 - 13313
Alignment:
Q  21 acaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgc 117  Q
    |||||||||||||| |||||||||||| ||||   ||||||||| ||||||| | ||| ||| || |||||||  ||| ||||||| ||| |||||||||    
T  13141 acaaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgc 13240  T
Q  118 ata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttctt 189  Q
    | | |||||||||  ||| |||||||||||||||||  |||||  ||| ||||||||||| ||||||| ||||    
T  13241 acataacattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatctt 13313  T

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Target: scaffold0175; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34153 - 34200
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaac 48  Q
    |||| |||||||||||||||||||||| |||||| |||||||||||||    
T  34153 tcatacagcttagttaaataacaaacaacaacataggcagtatacaac 34200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 243
Target Start/End: Complemental strand, 16332 - 16196
Alignment:
Q  107 ttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattac 205  Q
    |||||||||||| | |||||||||  |||||||| ||||||| ||||| || ||  |||||||||||||| || |||||||||||||||||||  |||||    
T  16332 ttaagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcatattac 16234  T
Q  206 tacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| ||| || ||||  ||||||||||    
T  16233 tacccaagggtccacctctaatcaaattatgcgacaca 16196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 33047 - 32898
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||||||||||||||| |||||| ||||||||  ||||||||||||  || ||||||||||| ||||||| | ||||||| ||||||||||  ||| |     
T  33047 tcatgcagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc- 32950  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatca 149  Q
    ||||| |||  ||||||||||| |||||||||| ||||||| ||||||||||    
T  32949 attatacttcgagtaatgcatataacattataacacatcatgatcaacatca 32898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 45958 - 46107
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatcttatgtataca 98  Q
    ||||||||||||||||| |||||| ||||||||  ||||||||||||  || ||||||||||| ||||||| | ||||||| ||||||||||  ||| |     
T  45958 tcatgcagcttagttaattaacaa-cagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc- 46055  T
Q  99 attattctttaagtaatgcata-aacattataatacatcataatcaacatca 149  Q
    ||||| |||  ||||||||||| |||||||||| ||||||| ||||||||||    
T  46056 attatacttcgagtaatgcatataacattataacacatcatgatcaacatca 46107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16143 - 16193
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaaca 52  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||| ||||    
T  16143 tcatgcagcttagttaaataac-aacaacaacataggcagtatacaaaaaca 16193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 4544 - 4723
Alignment:
Q  8 gcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatacaattatt 104  Q
    ||||||||||||||||| ||||||||   |||||||| || ||||   ||||||||| ||||||||| ||| ||| |||||||| |  |||||| | ||     
T  4544 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 4642  T
Q  105 ctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     || ||||||||| || |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  4643 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 12126 - 12305
Alignment:
Q  8 gcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatacaattatt 104  Q
    ||||||||||||||||| ||||||||   |||||||| || ||||   ||||||||| ||||||||| ||| ||| |||||||| |  |||||| | ||     
T  12126 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 12224  T
Q  105 ctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     || ||||||||| || |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  12225 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 12305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 22078 - 22257
Alignment:
Q  8 gcttagttaaataacaaacagcaacatgggcagtatacaacaaca---tgacataattatatcaaattcaattcatcaacatcttatgtatacaattatt 104  Q
    ||||||||||||||||| ||||||||   |||||||| || ||||   ||||||||| ||||||||| ||| ||| |||||||| |  |||||| | ||     
T  22078 gcttagttaaataacaa-cagcaacacaagcagtatataaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcata 22176  T
Q  105 ctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
     || ||||||||| || |||||||||  |||||||||||||||||||||  |||||  ||||||||||||||| |||||||    
T  22177 attcaagtaatgcgtataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 22257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 773 - 854
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| || ||||||||||| |||||||||||||||||| ||||||||||||| || ||||  ||||||||||    
T  773 cagcttcacagattgcagttaacttcttaaataggtctcattactaccgaagggtccatctctaatcaaattatgcgacaca 854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 10630 - 10543
Alignment:
Q  3 atgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||||||||||||||||| |||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  10630 atgcagcttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 10543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 16691 - 16505
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    |||||||||||||||||||||||| ||||||||   |||||||||   |||| ||||||||||| |||||||||  || ||| || ||||| | ||||||    
T  16691 tcatgcagcttagttaaataacaa-cagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtcaacagcatctcaagtatac 16593  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    | | ||  || ||||||||| || |||||||||  |||||| ||||||||||||||  |||||  |||||||||||| || |||||||    
T  16592 attcataattcaagtaatgcgtataacattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacagactataattaac 16505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 48388 - 48327
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  48388 cagcttcacatattgcatttaacttcttatataggtctcattactacccaagggtccatctc 48327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19294 - 19336
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  19294 tcatgcagcttagttaaataacaaacagcaacataggcagtat 19336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 14809 - 14951
Alignment:
Q  109 aagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattact 206  Q
    ||||||||||  ||||||| ||  ||||||||| ||||||| ||||| || ||  |||||||||||||| || |||||||||| ||||||| ||||||||    
T  14809 aagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttcattact 14907  T
Q  207 acccaagggtccatctccaaacaaaacatgcgacacatattgca 250  Q
    ||||| | ||||||||| || ||||  |||||||||| ||||||    
T  14908 acccaggagtccatctctaatcaaattatgcgacacagattgca 14951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 23824 - 23966
Alignment:
Q  109 aagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattact 206  Q
    ||||||||||  ||||||| ||  ||||||||| ||||||| ||||| || ||  |||||||||||||| || |||||||||| ||||||| ||||||||    
T  23824 aagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttcattact 23922  T
Q  207 acccaagggtccatctccaaacaaaacatgcgacacatattgca 250  Q
    ||||| | |||||||||  | ||||  |||||||||| ||||||    
T  23923 acccaggtgtccatctcttatcaaattatgcgacacagattgca 23966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 39248 - 39390
Alignment:
Q  109 aagtaatgca--taaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattact 206  Q
    ||||||||||  ||||||| ||  ||||||||| ||||||| ||||| || ||  |||||||||||||| || |||||||||| ||||||| ||||||||    
T  39248 aagtaatgcaattaaacatcatcttacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttcattact 39346  T
Q  207 acccaagggtccatctccaaacaaaacatgcgacacatattgca 250  Q
    ||||| | |||||||||  | ||||  |||||||||| ||||||    
T  39347 acccaggtgtccatctcttatcaaattatgcgacacagattgca 39390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 3904 - 3994
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||| ||||||||||| ||||| || ||  |||||||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||    
T  3904 acattataatcaacattaacatttcataa-cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctc 3994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 8335 - 8425
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||| ||||||||||| ||||| || ||  |||||||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||    
T  8335 acattataatcaacattaacatttcataa-cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctc 8425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28444 - 28536
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttat 91  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||   |||||||||||||| ||||||| | ||||||| |||||||||||    
T  28444 tcatgcagcttagttaaataacaa-caacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcaacaacatcttat 28536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11322 - 11364
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  11322 tcatgcagcttagttaaataacaaacagcaacataggcagtat 11364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2027 - 2069
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||  ||||| ||||||||    
T  2027 tcatgcagcttagttaaataacaaacacaaacataggcagtat 2069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 11534 - 11447
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacat 86  Q
    |||||||||||||||||||||||| || |||||| || |||||||||   |||||||||||||| ||||||| ||||||||||||||||    
T  11534 tcatgcagcttagttaaataacaa-caacaacataggtagtatacaaaaacaacatgacataataatatcaatttcaattcatcaacat 11447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 65716 - 65642
Alignment:
Q  167 tcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgaca 241  Q
    |||||| || || |||||||||||||||||||||||||||||||||||||||||||| || ||||  ||||||||    
T  65716 tcacaggttgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgaca 65642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 128827 - 128897
Alignment:
Q  46 aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatg 116  Q
    |||| ||||||||||| ||||||||| ||| ||| ||||||||||  ||| ||||||| ||| ||||||||    
T  128827 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatg 128897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 1531 - 1612
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||  ||||| || |||||||||||||||||||||| ||||||||||||||||||||| || ||||  ||||||||||    
T  1531 cagcttcgtagattgcatttaacttcttatataggtctcaatactacccaagggtccatctctaatcaaattatgcgacaca 1612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 15694 - 15737
Alignment:
Q  4 tgcagcttagttaaataacaaacagcaacatgggcagtatacaa 47  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  15694 tgcagcttagttaaataacaaacagcaacataggcagtatacaa 15737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 6669 - 6818
Alignment:
Q  31 acatgggcagtatacaa---caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcat-aaacatt 126  Q
    |||| ||||||||||||   |||||||||||||| |||||||   ||||||| ||||||||||  ||| |||  ||| || ||||||||||| |||| ||    
T  6669 acataggcagtatacaaaatcaacatgacataatgatatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacgtt 6768  T
Q  127 ataatacatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    |||  ||||||||||||||| |||||| || ||| |||||| ||||||||    
T  6769 atatcacatcataatcaacaacaacatatcatatacagctttacagatta 6818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 18410 - 18300
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaa 231  Q
    |||||||| ||||||| ||||| || ||  ||||||||||||||  | ||||||||||| ||||||| |||||||||||| ||||||||||| || ||||    
T  18410 acatcatattcaacattaacatttcataa-cagcttcacagattgtagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaa 18312  T
Q  232 acatgcgacaca 243  Q
      ||||||||||    
T  18311 ttatgcgacaca 18300  T

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Target: scaffold2014 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 1062 - 1151
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||||||||||||||||||| ||||||||  | |||| ||||| ||||  ||||||||| | | ||||||||||||    
T  1062 tcatgcagcttagttaaataacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatacgaatcatcaacatct 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 243
Target Start/End: Complemental strand, 1195 - 1074
Alignment:
Q  121 aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccat 220  Q
    |||||||||  |||||||| ||||||| || || || ||  ||||||||| |||| || |||||||||||||||||||  |||||||||||||| |||||    
T  1195 aacattatatcacatcatattcaacattaatatttcataa-cagcttcactgattgcagttaacttcttatataggtcatattactacccaaggatccat 1097  T
Q  221 ctccaaacaaaacatgcgacaca 243  Q
    ||| || ||||  ||||||||||    
T  1096 ctctaatcaaattatgcgacaca 1074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8496 - 8585
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||||||||||||||||||||||| |||||| ||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  8496 tcatgcagcttagttaaataacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 8585  T

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Target: scaffold0621; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6565 - 6607
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  6565 tcatgcagcttagttaaataacaaacagcaacataggcagtat 6607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 27912 - 28046
Alignment:
Q  51 catgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcata-aacattataatacatcataatcaacatca 149  Q
    ||||||||||| ||||||||| ||| ||| |||||||| |  |||||| | ||  || |||||||||||| |||||||||  ||||||||||||||||||    
T  27912 catgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatca 28011  T
Q  150 acatgtcttattcagcttcacagattacaattaac 184  Q
    |||  |||||  || |||||||| ||| |||||||    
T  28012 acaaatcttaaacaacttcacaggttataattaac 28046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 53640 - 53551
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||  ||||||||||||||| ||||||||  | |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  53640 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 53551  T

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Target: scaffold0671 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 6264 - 6375
Alignment:
Q  131 tacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaa 230  Q
    ||||||||| ||||||| ||||| || ||  |||||||||||||| || |||||||||| ||||||| || |||||||||| || |||||||| || |||    
T  6264 tacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttgtataggtttctttactacccagggatccatctctaatcaa 6362  T
Q  231 aacatgcgacaca 243  Q
    |  ||||||||||    
T  6363 attatgcgacaca 6375  T

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Target: scaffold0035 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 46655 - 46596
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||| ||| |||||||    
T  46655 cagcttcacagattgcagttaacttcttatataggtcacattactacctaagagtccatc 46596  T

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Target: scaffold0628 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2897 - 2808
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||||||||||||||||||||||||| |||| |||||||| |||  || ||||| ||||  ||||||||| ||| ||| ||||||||    
T  2897 tcatgcagcttagttaaataacaaacagctacataggcagtatgcaaatcatcatgatataacaatatcaaatgcaaatcaacaacatct 2808  T

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Target: scaffold0074 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 38793 - 38704
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||| |||||||||||||||||||||||||| | ||||||  | |||||||||| ||||  ||||||||| ||| ||||||| ||||    
T  38793 tcatgcaccttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaatatct 38704  T

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Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 4554 - 4709
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaacat---gacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||||| |||||||||||||||| || || ||| |||||||| ||||| ||    || || || |||||||||  |||||| ||||||||||  ||| |    
T  4554 tcatgcaacttagttaaataacaa-caacagcataggcagtatgcaacagcagcaagatatcataatatcaaatataattcaacaacatcttaaatattc 4652  T
Q  98 aattattctttaagtaatgcataa-acattataatacatcataatcaacatcaacat 153  Q
    | |||| ||| ||||||||||||| ||||||||  ||||||| ||||||||||||||    
T  4653 atttatacttcaagtaatgcataatacattatatcacatcatgatcaacatcaacat 4709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 7006 - 6925
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaaacatgcgacaca 243  Q
    |||||||||||||| || ||||| ||||||||||||| |||||||||| ||||| ||||| | || |||  |||||||||||    
T  7006 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggcccatccctaatcaactcatgcgacaca 6925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 8509 - 8691
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaacaac---atgacataattatatcaaattcaattcatcaacatcttatgtatac 97  Q
    ||||||||||| |||||||||| || |||||||| || ||||||||| |||   |||||||||| ||||||| | ||| ||| ||||||||||   || |    
T  8509 tcatgcagcttggttaaataac-aatagcaacataggtagtatacaaaaacagtatgacataataatatcaattgcaagtcaacaacatcttaaacattc 8607  T
Q  98 aattattctttaagtaatgcata-aacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaac 184  Q
    || | | ||| |||||||||| | |||||||    |||||||||||||||||||||  || ||  ||||||||||||||  |||||||    
T  8608 aagtgtacttcaagtaatgcacataacatta----acatcataatcaacatcaacacatcctaaacagcttcacagattgtaattaac 8691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 3574 - 3434
Alignment:
Q  46 aacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcata-aacattataatacatcataatcaa 144  Q
    |||| ||||||||||| ||||||||| ||| ||| |||||||| |  |||||| | ||  || ||||||||| || |||||||||  |||||||||||||    
T  3574 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatgcgtataacattatatcacatcataatcaa 3475  T
Q  145 catcaacatgtctt-attcagcttcacagattacaattaac 184  Q
    ||||||||  |||| |  |||||||| |||||| |||||||    
T  3474 catcaacacatcttaaaacagcttcatagattataattaac 3434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1112 - 1154
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  1112 tcatgcagcttagttaaataacaaacaacaacataggcagtat 1154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 582 - 640
Alignment:
Q  163 agcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    ||||||||||||  |||||||| ||||| ||||||| |||||||||| |||||||||||    
T  582 agcttcacagatctcaattaacatcttaaataggtcgcattactacctaagggtccatc 640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6842 - 6884
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||| ||||||||||||||||||||||| ||||||||    
T  6842 tcatgcagctcagttaaataacaaacagcaacataggcagtat 6884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12598 - 12687
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||| |||||||||||  ||||||||||||||| ||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  12598 tcatgtagcttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 12687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6641 - 6683
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  6641 tcatgcagcttagttaaataacaaacaacaacataggcagtat 6683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14021 - 14063
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  14021 tcatgcagcttagttaaataacaaacaacaacataggcagtat 14063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5673 - 5715
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  5673 tcatgcagcttagtaaaataacaaacagcaacataggcagtat 5715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6214 - 6172
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||| ||||| ||||||||    
T  6214 tcatgcagcttagttaaataacaaacagtaacataggcagtat 6172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8165 - 8119
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa 47  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||||    
T  8165 tcatgcagcttagttaacaaacaaacagcaacataggcagtatacaa 8119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2736 - 2694
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  2736 tcatgcagcttagttaaataacaaacatcaacataggcagtat 2694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1160 - 1118
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  1160 tcatgcagcttagttaaataacaaacaacaacataggcagtat 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23974 - 23932
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||| |||||||||||||||||||||||||||| ||||||||    
T  23974 tcatgtagcttagttaaataacaaacagcaacataggcagtat 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 4761 - 4690
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattac 205  Q
    |||||||| ||||||| ||||| || ||  |||||||||||||| || ||||||||||||||||||| ||||||    
T  4761 acatcatattcaacattaacatttcata--cagcttcacagattgcagttaacttcttatataggtcacattac 4690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 22761 - 22672
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||||||||||||||||||||||||| |||| | |||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  22761 tcatgcagcttagttaaataacaaacagcgacatagacagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 22672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 221
Target Start/End: Complemental strand, 21497 - 21438
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatc 221  Q
    |||||||||| ||| || ||||| ||||| ||||||| |||||||||| |||||||||||    
T  21497 cagcttcacaaatttcagttaacatcttaaataggtcacattactacctaagggtccatc 21438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32566 - 32643
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaat 76  Q
    |||||||||||||||||  ||||||||||||||| ||||||||  | |||||||||| ||||  ||||||||| ||||    
T  32566 tcatgcagcttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaat 32643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 62228 - 62270
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||| ||||||||||||||| ||||||||    
T  62228 tcatgcagcttagttaaacaacaaacagcaacataggcagtat 62270  T

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Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 132688 - 132721
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacat 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  132688 tcatgcagcttagataaataacaaacagcaacat 132721  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15868 - 15826
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  15868 tcatgcagcttagttaaataacaaacaacaacataggcagtat 15826  T

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Target: scaffold0010 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 60807 - 60761
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa 47  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||||    
T  60807 tcatgcagcttagttaataaacaaacagcaacataggcagtatacaa 60761  T

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Target: scaffold0010; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 129935 - 130024
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatct 88  Q
    ||||||| ||||||||||||||| |||||||||| |||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  129935 tcatgcatcttagttaaataacacacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 130024  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 160714 - 160756
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  160714 tcatgcagcttagttaaataacaatcagcaacataggcagtat 160756  T

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Target: scaffold0124 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 42810 - 42871
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctc 223  Q
    |||||||||||||  || ||||| ||||| ||||||| |||||||||| |||||||||||||    
T  42810 cagcttcacagatctcagttaacatcttaaataggtcacattactacctaagggtccatctc 42871  T

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Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38347 - 38305
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||    
T  38347 tcatgcagcttagttaattaacaatcagcaacataggcagtat 38305  T

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Target: scaffold0107 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 15483 - 15362
Alignment:
Q  24 aacagcaacatgggcagtatacaa-caacatgacataattatatcaaattcaattcatcaacatcttatgtatacaattattctttaagtaatgcat-aa 121  Q
    |||| |||||| ||||| |||||| || ||||||||||| ||||||| ||||||||| |||||||||   ||| ||| || |  ||||||||||||| ||    
T  15483 aacatcaacataggcagcatacaaacagcatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataattcttaagtaatgcataaa 15384  T
Q  122 acattataatacatcataatca 143  Q
    ||||||||  |||| |||||||    
T  15383 acattatatcacattataatca 15362  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14788 - 14747
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta 42  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  14788 tcatgcagcttagttaactaacaaacagcaacataggcagta 14747  T

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Target: scaffold0716 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4721 - 4805
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||||||||||||||| ||||||||| ||| ||| ||||    
T  4721 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaac 4805  T

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Target: scaffold0079 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 44269 - 44325
Alignment:
Q  163 agcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    ||||||||||||| || ||||| ||||| ||||||| |||||||||| |||||||||    
T  44269 agcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtcca 44325  T

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Target: scaffold0676 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 4622 - 4665
Alignment:
Q  166 ttcacagattacaattaacttcttatataggtctcattactacc 209  Q
    ||||||| ||||| |||||||||||||||||||||| |||||||    
T  4622 ttcacagtttacagttaacttcttatataggtctcactactacc 4665  T

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Target: scaffold0550 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 7662 - 7717
Alignment:
Q  165 cttcacagattacaattaacttcttatataggtctcattactacccaagggtccat 220  Q
    ||||||||||| || ||||| |||||||||||| ||||||||||| |||| |||||    
T  7662 cttcacagattccagttaacatcttatataggtttcattactacctaaggttccat 7717  T

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Target: scaffold0280 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 19220 - 19173
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacc 209  Q
    |||||||||||||| || ||||| |||||||||||||||| |||||||    
T  19220 cagcttcacagatttcatttaacatcttatataggtctcactactacc 19173  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25136 - 25179
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtata 44  Q
    |||||||||||||||||  ||||||||||||||| |||||||||    
T  25136 tcatgcagcttagttaataaacaaacagcaacataggcagtata 25179  T

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Target: scaffold0111 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 243
Target Start/End: Original strand, 32597 - 32706
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctccaaacaaa 231  Q
    |||| ||||||||||| ||||| || ||  |||||||||||||| |||||||| | ||| | ||||| | |||||||||| ||||||| ||| |||||||    
T  32597 acattataatcaacattaacatttcataa-cagcttcacagattgcaattaacatttta-aaaggtcactttactacccaggggtccaactctaaacaaa 32694  T
Q  232 acatgcgacaca 243  Q
      ||||||||||    
T  32695 ttatgcgacaca 32706  T

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Target: scaffold1984 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 159 - 201
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||| |||||||| |||||| ||||||||    
T  159 tcatgcagcttagttaaacaacaaacaacaacataggcagtat 201  T

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Target: scaffold0530 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1125 - 1083
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||||||||||||| |||||| || |||||    
T  1125 tcatgcagcttagttaaataacaaacaacaacataggtagtat 1083  T

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Target: scaffold0484 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 1054 - 1128
Alignment:
Q  109 aagtaatgcataaa-cattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaatta 182  Q
    |||||||||||||| |||||||  ||||||||||||||| |||||  |||||  || |||||||||||| |||||    
T  1054 aagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagattataatta 1128  T

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Target: scaffold0461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 11494 - 11536
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||    
T  11494 tcatgcagcttagttaattaacaatcagcaacataggcagtat 11536  T

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Target: scaffold0357 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 13158 - 13247
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat--acaacaacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||||||||  |||||||| |||||| ||||||||  | |||| ||||| ||||  ||||||||| ||| ||| ||||||||    
T  13158 tcatgcagcttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaaatcaacaacatct 13247  T

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Target: scaffold0125 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 45883 - 45841
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtat 43  Q
    |||||||||||||||||||||||||||| || || ||||||||    
T  45883 tcatgcagcttagttaaataacaaacagaaaaataggcagtat 45841  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10557 - 10646
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatct 88  Q
    |||||||||||  |||||||||||||| |||||| |||||||| |||  || ||||| ||||  ||||| ||| ||| ||||||||||||    
T  10557 tcatgcagcttttttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatct 10646  T

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Target: scaffold0476 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12796 - 12884
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatc 87  Q
    ||||||||||||| ||||||||||||| |||||| |||| ||| |||  || ||||| ||||  ||||| ||| ||| |||||||||||    
T  12796 tcatgcagcttagctaaataacaaacaacaacataggcaatatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatc 12884  T

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Target: scaffold0393 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 1681 - 1738
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||  || ||||| ||||| ||||||| |||||||||| |||||||||    
T  1681 cagcttcacagatctcagttaacatcttaaataggtcacattactacctaagggtcca 1738  T

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Target: scaffold0220 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 4904 - 4804
Alignment:
Q  118 ataaacattataatacatcataatcaacatcaacatgtcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtc 217  Q
    |||||||| ||  ||||||||| ||||||| ||||| || ||  |||||||||||||| || | |||||||||||||||||  | | ||||||||| |||    
T  4904 ataaacatcatcttacatcatattcaacattaacatttcataa-cagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtc 4806  T
Q  218 ca 219  Q
    ||    
T  4805 ca 4804  T

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Target: scaffold0158 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 3030 - 3087
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||| |||||||| || |||||||||| || ||||||| ||| |||||    
T  3030 cagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtcca 3087  T

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Target: scaffold0158; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 6696 - 6753
Alignment:
Q  162 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 219  Q
    |||||||||||||| |||||||| || |||||||||| || ||||||| ||| |||||    
T  6696 cagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtcca 6753  T

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Target: scaffold0138 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 12969 - 13057
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatacaa--caacatgacataattatatcaaattcaattcatcaacatc 87  Q
    |||||| ||| |||||||||||||||| |||||| |||||||| |||  || ||||| ||||  ||||| ||| ||| |||||||||||    
T  12969 tcatgctgctcagttaaataacaaacaacaacataggcagtatgcaaatcagcatgatataacaatatcgaatgcaagtcatcaacatc 13057  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 129061 - 129021
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagta 42  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  129061 tcatgcagcttagttaa-taacaaacagcaacataggcagta 129021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 511 - 555
Alignment:
Q  165 cttcacagattacaattaacttcttatataggtctcattactacc 209  Q
    ||||||||||| || ||||| |||||||||||||||| |||||||    
T  511 cttcacagatttcatttaacatcttatataggtctcactactacc 555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10800 - 10884
Alignment:
Q  1 tcatgcagcttagttaaataacaaacagcaacatgggcagtatac---aacaacatgacataattatatcaaattcaattcatcaac 84  Q
    |||||||||||||||||||||| ||||||||||   |||||||||   |||| ||||||||||| ||||||||| ||| ||| ||||    
T  10800 tcatgcagcttagttaaataac-aacagcaaca-cagcagtatacaaaaacatcatgacataataatatcaaatgcaagtcaacaac 10884  T

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Target: scaffold0109 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 45298 - 45342
Alignment:
Q  165 cttcacagattacaattaacttcttatataggtctcattactacc 209  Q
    ||||||||||| || ||||| |||||||||||||||| |||||||    
T  45298 cttcacagatttcatttaacatcttatataggtctcactactacc 45342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 10327 - 10371
Alignment:
Q  132 acatcataatcaacatcaacatgtcttattcagcttcacagatta 176  Q
    |||||||||||||||||||||  |||||  |||||||||||||||    
T  10327 acatcataatcaacatcaacacatcttaaacagcttcacagatta 10371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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