View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13597_low_10 (Length: 276)
Name: NF13597_low_10
Description: NF13597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13597_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 20 - 257
Target Start/End: Original strand, 34899738 - 34899975
Alignment:
| Q |
20 |
atcatattgtcagtgatatcatctgcacaaattcacataaaattttgtagttggaagatacatacctttcatgtttggtgagaatggaaggaaaattttg |
119 |
Q |
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| T |
34899738 |
atcatattgtcagtgatatcatctgcacaaattcacataaaattttgtagttggaagatacatacctttcatgtttggtgagaatggaaggaaaattttg |
34899837 |
T |
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| Q |
120 |
agactataaggttgcatacacgcaggggaagacacaatttagcttttgttgacatcaaatagcgagagaagaactaaagagagatgtgtttatatgcata |
219 |
Q |
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| T |
34899838 |
agactataaggttgcatacacgcaggggaagacacaatttagcttttgttgacatcaaatagcgagagaagaactaaagagagatgtgtttatatgcata |
34899937 |
T |
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| Q |
220 |
taggtaaagtttggtagtttcaactttcaagttgagat |
257 |
Q |
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| T |
34899938 |
taggtaaagtttggtagtttcaactttcaagttgagat |
34899975 |
T |
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