View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1359_high_38 (Length: 295)
Name: NF1359_high_38
Description: NF1359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1359_high_38 |
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Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 38 - 288
Target Start/End: Original strand, 29280450 - 29280700
Alignment:
| Q |
38 |
ctttgtcccctccaaatgcaacacaaagcttcttcaaacacttgattccaaattcatacacatcatcaaccttttcattctcaccatctacaccttttct |
137 |
Q |
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| T |
29280450 |
ctttgtcccctccaaatgcaacacaaagcttcttcaaacacttgattccaaattcatacacatcatcaaccttttcattctcaccatctacaccttttct |
29280549 |
T |
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| Q |
138 |
tttttcttcttccgatccacgatcaccaaaaccagcaccattaccgtcctctttaacagacaaaaccaacgacttcatcggaatgataaataacctaacc |
237 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29280550 |
tttttcttcttccgatccacaatcaccaaaaccagcaccattaccgtcctctttaacagacaaaaccaacgacttcatcggaatgataaataacctaacc |
29280649 |
T |
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| Q |
238 |
aaagtctcatgaggcaaagacatcagcatctgttcccattccttcatctca |
288 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||| |||| |
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| T |
29280650 |
aaagtctcatgaggcaaagacatcagcatctgttcacattccttcaactca |
29280700 |
T |
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