View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1359_high_55 (Length: 250)
Name: NF1359_high_55
Description: NF1359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1359_high_55 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 7099550 - 7099307
Alignment:
| Q |
1 |
taaagatacttaactcttagcctcgaagttttataagagttccttcctttg-----gtgtcatgagattagccacaaaagaatgagaaaaagttgatttt |
95 |
Q |
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| T |
7099550 |
taaagatactcaactcttagcctcgaagttttataagagttccttcctttcctttagtgtcatgagattagccacaaaagaatgagaaaaggctgatttt |
7099451 |
T |
|
| Q |
96 |
ataggtacatatcccgaaacatgcgtccaacaaccaaccaacatgaacaatgactcatcatattagatctatttagatcaacgagtgccctacaatgggc |
195 |
Q |
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||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7099450 |
ataggtacatatcccgagacatgcgcccaacaaccaaccaacataaacaatgactcatcatattagatctatttagatcaacgagtgccctacaatgggc |
7099351 |
T |
|
| Q |
196 |
ttgaacctaataattatactattatacccatcttaatcattcat |
239 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7099350 |
ttgaacctaataattatactattatacccatcttaatcattcat |
7099307 |
T |
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