View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1359_high_58 (Length: 243)
Name: NF1359_high_58
Description: NF1359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1359_high_58 |
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Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1877368 - 1877147
Alignment:
| Q |
1 |
gccctataagattttgaagaaaaaataacgtcattatatacccctaaaatctttcaaacggttgtatggtgtatcaaattagcattagacttctctttat |
100 |
Q |
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| T |
1877368 |
gccctataagattttgaagaaaaaataatgtcattatatacccctaaaatttttcaaacggttgtgtggtgtatcaaataagcattagacttctctttat |
1877269 |
T |
|
| Q |
101 |
agaaaaatataatactgggcaagattacactcgttcccactaacagaaaaatatgataccaaatgaaactagcaatccaccttcgagctaccaacaaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1877268 |
agaaaaatataatactgggcaagattacactcgttcccactaacagaaaaatatgataccaaatgaaactagcaatccaccttcgagctaccaacaaaat |
1877169 |
T |
|
| Q |
201 |
aaaccatcctccacctctctat |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
1877168 |
aaaccatcctccacctctctat |
1877147 |
T |
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