View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1359_low_3 (Length: 834)

Name: NF1359_low_3
Description: NF1359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1359_low_3
NF1359_low_3
[»] chr8 (2 HSPs)
chr8 (240-834)||(29269804-29270385)
chr8 (80-174)||(29270364-29270458)
[»] scaffold0349 (5 HSPs)
scaffold0349 (408-785)||(17607-17984)
scaffold0349 (269-363)||(16852-16945)
scaffold0349 (80-142)||(16790-16852)
scaffold0349 (365-409)||(16964-17008)
scaffold0349 (801-834)||(18069-18102)
[»] chr6 (48 HSPs)
chr6 (408-785)||(27713960-27714337)
chr6 (486-715)||(27702263-27702492)
chr6 (486-701)||(26628004-26628219)
chr6 (486-701)||(26733981-26734196)
chr6 (87-277)||(27703284-27703480)
chr6 (142-333)||(26059489-26059685)
chr6 (142-333)||(26079459-26079655)
chr6 (496-792)||(26853623-26853917)
chr6 (494-646)||(26966104-26966256)
chr6 (494-628)||(27422504-27422638)
chr6 (495-704)||(26890066-26890275)
chr6 (269-363)||(27714999-27715092)
chr6 (206-326)||(25486923-25487042)
chr6 (206-326)||(26146521-26146640)
chr6 (486-645)||(26828358-26828517)
chr6 (80-162)||(27682501-27682583)
chr6 (494-665)||(26651110-26651281)
chr6 (494-665)||(26757078-26757249)
chr6 (494-675)||(26631460-26631641)
chr6 (494-675)||(26737435-26737616)
chr6 (485-592)||(26640665-26640772)
chr6 (485-592)||(26746631-26746738)
chr6 (408-489)||(26627707-26627788)
chr6 (408-489)||(26733684-26733765)
chr6 (486-834)||(27652032-27652413)
chr6 (80-142)||(27715092-27715154)
chr6 (486-579)||(31291368-31291461)
chr6 (583-668)||(31289405-31289490)
chr6 (421-489)||(27702670-27702738)
chr6 (630-769)||(26890567-26890706)
chr6 (206-262)||(25583207-25583263)
chr6 (94-178)||(27078974-27079057)
chr6 (231-306)||(27423905-27423979)
chr6 (213-334)||(27661929-27662049)
chr6 (258-326)||(25986741-25986808)
chr6 (365-409)||(27714936-27714980)
chr6 (422-489)||(27660703-27660770)
chr6 (240-334)||(27079032-27079125)
chr6 (429-489)||(26650492-26650552)
chr6 (429-489)||(26756460-26756520)
chr6 (143-182)||(26852258-26852297)
chr6 (431-489)||(26807072-26807130)
chr6 (437-489)||(26639748-26639800)
chr6 (437-489)||(26745714-26745766)
chr6 (669-792)||(26828527-26828650)
chr6 (272-326)||(25514427-25514480)
chr6 (427-489)||(27419460-27419522)
chr6 (801-834)||(27713842-27713875)
[»] scaffold0003 (3 HSPs)
scaffold0003 (494-628)||(64725-64859)
scaffold0003 (231-306)||(63384-63458)
scaffold0003 (427-489)||(67841-67903)
[»] chr4 (18 HSPs)
chr4 (586-792)||(18692287-18692494)
chr4 (530-676)||(5083123-5083269)
chr4 (408-489)||(18675056-18675137)
chr4 (408-489)||(18685629-18685710)
chr4 (408-491)||(18683371-18683454)
chr4 (408-489)||(18719586-18719667)
chr4 (421-489)||(18693111-18693179)
chr4 (586-718)||(18674282-18674423)
chr4 (421-489)||(18650937-18651005)
chr4 (427-489)||(18726883-18726945)
chr4 (674-792)||(18650551-18650670)
chr4 (421-487)||(5082450-5082516)
chr4 (683-792)||(18682973-18683082)
chr4 (664-792)||(18718770-18718899)
chr4 (586-676)||(18718903-18718993)
chr4 (486-519)||(18674450-18674483)
chr4 (486-519)||(18692521-18692554)
chr4 (486-519)||(18719020-18719053)
[»] chr1 (1 HSPs)
chr1 (527-612)||(26141211-26141296)
[»] scaffold0277 (1 HSPs)
scaffold0277 (530-580)||(824-874)


Alignment Details
Target: chr8 (Bit Score: 502; Significance: 0; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 502; E-Value: 0
Query Start/End: Original strand, 240 - 834
Target Start/End: Complemental strand, 29270385 - 29269804
Alignment:
Q  240 gggtacattccttggtctaggtccattataaagttaaccgtcttctttgttattctctcaatgtcaagaatacaggtttgtgctttgctgtttacgtcat 339  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||            ||||||||||||||||||||||||||||||    
T  29270385 gggtacataccttagtctaggtccattataaagttaaccgtcttctt-gttattctct------------tacaggtttgtgctttgctgtttacgtcat 29270299  T
Q  340 tatcattattataaaccattgagacatgatgcaaggcatgtgcaacatctcaattattgcaacactttataaatagtgccagatccaagatgaatggtgt 439  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29270298 tatcattattataaaccattgagacatgatgcaaggcatgtggaacatctcaattattgcaacactttataaatagtgccagatccaagatgaatggtgt 29270199  T
Q  440 tacaaataagatccttatacttcgaaagcttaaatggttttaatcataatttacgcaacttttctctaaccaaaactaagtattttcttgttctttgact 539  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29270198 tacaaataagatccttatacttcgaaagcttaaatggttataatcataatttacgcaacttttctctaaccaaaactaagtattttcttgttctttgact 29270099  T
Q  540 gtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcgacaagtctagaggttgctcacagcacataatccgtttgttgttcgaa 639  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29270098 gtacattgtcaggaaaccacatgtagtcatctggctatttgcattgtcatgcgacaagtctagaggttgctcacagcacataatccgtttgttgttcgaa 29269999  T
Q  640 agggcagttagtaatgatatgatttgcagctcagttggagtgctttgagaatttcaatcttagtacacaatttggaatctacgtgttcaacaagaaagga 739  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  29269998 agggcagtgagtaatgatatgctttgcagctcagttggagtgctttgtgaatttccatcttagtacacaatttggaatctacgtgttcaataagaaagga 29269899  T
Q  740 agcatgagagaggatgcggtattcaccaattcttatagaaggagtaaatcagaacttggaattttctgaggcagaacttgtgtagcagcaacaac 834  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29269898 agcatgagagaggatgcggtattcaccaattcttatagaaggagtaaatcagaacttggaattttctgaagcagaacttgtgtagcagcaacaac 29269804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 29270458 - 29270364
Alignment:
Q  80 cagagacagaggaggatatcaatgcttcattgcaacaacaggatttgacgaaagaggaacaaagaaagacatggggtacattccttagtctaggt 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29270458 cagagacagaggaggatatcaatgcttcattgcaacaacaggatttgacgaaagaggaacaaagaaagacatggggtacataccttagtctaggt 29270364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 346; Significance: 0; HSPs: 5)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 408 - 785
Target Start/End: Original strand, 17607 - 17984
Alignment:
Q  408 ataaatagtgccagatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataatttacgcaacttttctcta 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17607 ataaatagtgccagatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataatttacgcaacttttctcta 17706  T
Q  508 accaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcgacaagtctagaggtt 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17707 accaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgcattgtcatgcgacaagtctagaggtt 17806  T
Q  608 gctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttgcagctcagttggagtgctttgagaatttcaatcttagtacac 707  Q
    ||| ||||| || |||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17807 gcttacagcgcagaatccgttggttgttcgaaagggcagcgagtaatgatatgctttgcagctcagttggagtgctttgagaatttcaatcttagtacac 17906  T
Q  708 aatttggaatctacgtgttcaacaagaaaggaagcatgagagaggatgcggtattcaccaattcttatagaaggagta 785  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17907 aatttggaatctacgtgttcaacaagaaaggaagcatgagagaggatgcggtattcaccaattcttatagaaggagta 17984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 269 - 363
Target Start/End: Original strand, 16852 - 16945
Alignment:
Q  269 aaagttaaccgtcttctttgttattctctcaatgtcaagaatacaggtttgtgctttgctgtttacgtcattatcattattataaaccattgaga 363  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16852 aaagttaatcgtcttctt-gttattctctcaatctcaagaatacaggtttgtgctttgctgtttacgtcattatcattattataaaccattgaga 16945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 16790 - 16852
Alignment:
Q  80 cagagacagaggaggatatcaatgcttcattgcaacaacaggatttgacgaaagaggaacaaa 142  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16790 cagagacagaggaggatatcaatgcttcattgcaacagcaggatttgacgaaagaggaacaaa 16852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 365 - 409
Target Start/End: Original strand, 16964 - 17008
Alignment:
Q  365 atgatgcaaggcatgtgcaacatctcaattattgcaacactttat 409  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  16964 atgatgcaaggcatgtggaacatctcaattattgcaacactttat 17008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 801 - 834
Target Start/End: Original strand, 18069 - 18102
Alignment:
Q  801 ttttctgaggcagaacttgtgtagcagcaacaac 834  Q
    ||||||||| ||||||||||||||||||||||||    
T  18069 ttttctgagacagaacttgtgtagcagcaacaac 18102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 346; Significance: 0; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 408 - 785
Target Start/End: Complemental strand, 27714337 - 27713960
Alignment:
Q  408 ataaatagtgccagatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataatttacgcaacttttctcta 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27714337 ataaatagtgccagatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataatttacgcaacttttctcta 27714238  T
Q  508 accaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcgacaagtctagaggtt 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27714237 accaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgcattgtcatgcgacaagtctagaggtt 27714138  T
Q  608 gctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttgcagctcagttggagtgctttgagaatttcaatcttagtacac 707  Q
    ||| ||||| || |||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27714137 gcttacagcgcagaatccgttggttgttcgaaagggcagcgagtaatgatatgctttgcagctcagttggagtgctttgagaatttcaatcttagtacac 27714038  T
Q  708 aatttggaatctacgtgttcaacaagaaaggaagcatgagagaggatgcggtattcaccaattcttatagaaggagta 785  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27714037 aatttggaatctacgtgttcaacaagaaaggaagcatgagagaggatgcggtattcaccaattcttatagaaggagta 27713960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 486 - 715
Target Start/End: Complemental strand, 27702492 - 27702263
Alignment:
Q  486 taatttacgcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattg 585  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  27702492 taatttacgcaacttttctctaaccaaaactaagtattttcttgttttttgactgtacattgtcaggaaacgacatgtagtcatctggctatttgcattg 27702393  T
Q  586 tcatgcgacaagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttgcagctcagttggagtgcttt 685  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  27702392 tcatgcgacaagtctagaggttgcttacagcacagaatccgttggttgttcgaaaggacagtgagtaatgatatgctttgcagctcagttggagtgcttt 27702293  T
Q  686 gagaatttcaatcttagtacacaatttgga 715  Q
    ||||||||| ||||||||||||||||||||    
T  27702292 gagaatttccatcttagtacacaatttgga 27702263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 486 - 701
Target Start/End: Original strand, 26628004 - 26628219
Alignment:
Q  486 taatttacgcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattg 585  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| | || ||||    
T  26628004 taatttacgcaacttttctctaaccaaaactaagtatttttttgttctttgactgtacattgtcaggaaaccacatttagtcatctggctctctgcattg 26628103  T
Q  586 tcatgcgacaagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttgcagctcagttggagtgcttt 685  Q
    |||||| | | ||||||||||||||  ||  ||| |||||||| | |||||||| ||| ||| ||||||||||||  || || |||||||||||||||||    
T  26628104 tcatgcaagatgtctagaggttgcttgcacaacaaaatccgttggctgttcgaatgggaagtgagtaatgatatgcattacatctcagttggagtgcttt 26628203  T
Q  686 gagaatttcaatctta 701  Q
    ||||||||||||||||    
T  26628204 gagaatttcaatctta 26628219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 486 - 701
Target Start/End: Original strand, 26733981 - 26734196
Alignment:
Q  486 taatttacgcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattg 585  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| | || ||||    
T  26733981 taatttacgcaacttttctctaaccaaaactaagtatttttttgttctttgactgtacattgtcaggaaaccacatttagtcatctggctctctgcattg 26734080  T
Q  586 tcatgcgacaagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttgcagctcagttggagtgcttt 685  Q
    |||||| | | ||||||||||||||  ||  ||| |||||||| | |||||||| ||| ||| ||||||||||||  || || |||||||||||||||||    
T  26734081 tcatgcaagatgtctagaggttgcttgcacaacaaaatccgttggctgttcgaatgggaagtgagtaatgatatgcattacatctcagttggagtgcttt 26734180  T
Q  686 gagaatttcaatctta 701  Q
    ||||||||||||||||    
T  26734181 gagaatttcaatctta 26734196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 87 - 277
Target Start/End: Complemental strand, 27703480 - 27703284
Alignment:
Q  87 agaggaggatatcaatgcttcattgcaacaacaggatttgacgaaagaggaacaaagaaagacatggggtacattccttagtctaggtgcatcaaaaagc 186  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27703480 agaggaggatatcaatgcttcattgcaacaacaggatttaaagaaagaggaacaaaaaaagacatggggtacattccttagtctaggtgcatcaaaaagc 27703381  T
Q  187 aacac------tgatgagaatgtggtattcagcagtgcacaagatgaaagaaagatgctgggtacattccttggtctaggtccattataaagttaac 277  Q
    |||||       ||||||| ||   | || | || ||||||||||||||||| ||||  |||||||||||||||||||| ||||| |||||||||||    
T  27703380 aacacgcatggggatgagattgaaattttaaacaatgcacaagatgaaagaatgatgtggggtacattccttggtctagctccatcataaagttaac 27703284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 142 - 333
Target Start/End: Original strand, 26059489 - 26059685
Alignment:
Q  142 agaaagacatggggtacattccttagtctaggtgcatcaaaaagcaacactgatgagaatgtggt------attcagcagtgcacaagatgaaagaaaga 235  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| | ||| | |      ||| |||||||||||||||||||||||||    
T  26059489 agaaagacttggggtacattccttagtctaggtgcatcaaaaagcaacacggatggggatgagattgaaatattaagcagtgcacaagatgaaagaaaga 26059588  T
Q  236 tgctgggtacattccttggtctaggtccattataaagttaaccgtcttctttgttattctctcaatgtcaagaatacaggtttgtgctttgctgttta 333  Q
    ||  |||||||||||| ||| ||||||||| |||||||||||||||||| |||||||||||||||| |||| | | ||||||||||||||| ||||||    
T  26059589 tgtggggtacattcctcggtttaggtccatcataaagttaaccgtcttc-ttgttattctctcaatctcaacattgcaggtttgtgctttgatgttta 26059685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 142 - 333
Target Start/End: Original strand, 26079459 - 26079655
Alignment:
Q  142 agaaagacatggggtacattccttagtctaggtgcatcaaaaagcaacactgatgagaatgtggt------attcagcagtgcacaagatgaaagaaaga 235  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| | ||| | |      ||| |||||||||||||||||||||||||    
T  26079459 agaaagacttggggtacattccttagtctaggtgcatcaaaaagcaacacggatggggatgagattgaaatattaagcagtgcacaagatgaaagaaaga 26079558  T
Q  236 tgctgggtacattccttggtctaggtccattataaagttaaccgtcttctttgttattctctcaatgtcaagaatacaggtttgtgctttgctgttta 333  Q
    ||  |||||||||||| ||| ||||||||| |||||||||||||||||| |||||||||||||||| |||| | | ||||||||||||||| ||||||    
T  26079559 tgtggggtacattcctcggtttaggtccatcataaagttaaccgtcttc-ttgttattctctcaatctcaacattgcaggtttgtgctttgatgttta 26079655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 496 - 792
Target Start/End: Original strand, 26853623 - 26853917
Alignment:
Q  496 aacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcgaca 595  Q
    |||||||||||||||||||||||| |||  ||||||||||||| || ||||||||| |  |||  ||| |||||||||||||||| |||||||| | | |    
T  26853623 aacttttctctaaccaaaactaagaatta-cttgttctttgaccgtgcattgtcagtat-ccatctgtggtcatctggctatttgcattgtcattcaaga 26853720  T
Q  596 agtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttgcagctcagttggagtgctttgagaatttca 695  Q
      ||||| |||||| |||| |||| |||| ||| | |||||||||||||||| |||||||||||| |||||||| |||||| || | |||||||| ||||    
T  26853721 tatctaggggttgcgcacaccacaaaatctgttggctgttcgaaagggcagtgagtaatgatatgctttgcagcccagttgtagagttttgagaaattca 26853820  T
Q  696 atcttagtacacaatttggaatctacgtgttcaacaagaaaggaagcatgagagaggatgcggtattcaccaattcttatagaaggagtaaatcaga 792  Q
    || ||||||||||| |||||| | || ||||||| ||  ||||||||| ||  ||||||| | ||||||||||  ||||| ||| ||||||||||||    
T  26853821 attttagtacacaaattggaaccaacatgttcaagaatgaaggaagcacgaaggaggatgtgatattcaccaacccttatggaaagagtaaatcaga 26853917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 494 - 646
Target Start/End: Original strand, 26966104 - 26966256
Alignment:
Q  494 gcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcga 593  Q
    |||||||||||| |||||||||||||  ||| |||||||||||||||||||||||||||| ||||  |||||||||||||||||||| | ||||||||||    
T  26966104 gcaacttttctcaaaccaaaactaagcttttacttgttctttgactgtacattgtcaggacaccatctgtagtcatctggctatttgcactgtcatgcga 26966203  T
Q  594 caagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcag 646  Q
    || |||||||| |||||  || |||| |||||||| |||||||||||||||||    
T  26966204 catgtctagagattgcttgcaccacagaatccgttggttgttcgaaagggcag 26966256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 494 - 628
Target Start/End: Complemental strand, 27422638 - 27422504
Alignment:
Q  494 gcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcga 593  Q
    |||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  27422638 gcaacttttctctaacgaaaactaagcatttacttgttctttgtctgtacattgtcaggaaaccatctgtagtcatctggctatttgcattgtcatgcga 27422539  T
Q  594 caagtctagaggttgctcacagcacataatccgtt 628  Q
    || |||||||| |||||| ||||| | ||||||||    
T  27422538 catgtctagagattgctcgcagcatagaatccgtt 27422504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 495 - 704
Target Start/End: Original strand, 26890066 - 26890275
Alignment:
Q  495 caacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcgac 594  Q
    ||||||||||||||||||||||||  ||||  || || |||||||||||||||||||||||| |  |||||||||||||||||||  | ||||||| ||     
T  26890066 caacttttctctaaccaaaactaaacatttattttttatttgactgtacattgtcaggaaactatctgtagtcatctggctatttttactgtcatgggag 26890165  T
Q  595 aagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttgcagctcagttggagtgctttgagaatttc 694  Q
    | |||||||||||| || || |||| |||||||  ||||||| |||||||||| ||||| | |||| ||||||||||||||| || | | ||||||||||    
T  26890166 atgtctagaggttgttcgcaccacagaatccgtcggttgttctaaagggcagtgagtaacggtatgctttgcagctcagttgaagagttatgagaatttc 26890265  T
Q  695 aatcttagta 704  Q
    |||| |||||    
T  26890266 aatcgtagta 26890275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 269 - 363
Target Start/End: Complemental strand, 27715092 - 27714999
Alignment:
Q  269 aaagttaaccgtcttctttgttattctctcaatgtcaagaatacaggtttgtgctttgctgtttacgtcattatcattattataaaccattgaga 363  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27715092 aaagttaatcgtcttctt-gttattctctcaatctcaagaatacaggtttgtgctttgctgtttacgtcattatcattattataaaccattgaga 27714999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 206 - 326
Target Start/End: Original strand, 25486923 - 25487042
Alignment:
Q  206 tattcagcagtgcacaagatgaaagaaagatgctgggtacattccttggtctaggtccattataaagttaaccgtcttctttgttattctctcaatgtca 305  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||| |||    
T  25486923 tattaagcagtgcgcaagatgaaagaaagatgttgggtacattccttagtctaggtccatcataaagttaaccgtcttc-ttgttattctctcaatctca 25487021  T
Q  306 agaatacaggtttgtgctttg 326  Q
    | | | |||||||||||||||    
T  25487022 acattgcaggtttgtgctttg 25487042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 206 - 326
Target Start/End: Original strand, 26146521 - 26146640
Alignment:
Q  206 tattcagcagtgcacaagatgaaagaaagatgctgggtacattccttggtctaggtccattataaagttaaccgtcttctttgttattctctcaatgtca 305  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||| |||    
T  26146521 tattaagcagtgcgcaagatgaaagaaagatgttgggtacattccttagtctaggtccatcataaagttaaccgtcttc-ttgttattctctcaatctca 26146619  T
Q  306 agaatacaggtttgtgctttg 326  Q
    | | | |||||||||||||||    
T  26146620 acattgcaggtttgtgctttg 26146640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 486 - 645
Target Start/End: Original strand, 26828358 - 26828517
Alignment:
Q  486 taatttacgcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattg 585  Q
    ||||||||  |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||  |||  |||||| ||||||||||| | ||||    
T  26828358 taatttacagaacttttctctatccaaaactaagcattttcttgttttttgactgtacattgtcaggagtccatctgtagtgatctggctattcgcattg 26828457  T
Q  586 tcatgcgacaagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggca 645  Q
    |||||||  | |||||| ||||||||  | |||| ||||||||||||| |||||||||||    
T  26828458 tcatgcgggatgtctagtggttgctcgtaccacaaaatccgtttgttgctcgaaagggca 26828517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 27682501 - 27682583
Alignment:
Q  80 cagagacagaggaggatatcaatgcttcattgcaacaacaggatttgacgaaagaggaacaaagaaagacatggggtacattc 162  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  27682501 cagagacagaggaggatatcaatgcttcattgcaacaacaggaattgatgaaagaggaacaaagaaagacatggggtacattc 27682583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 494 - 665
Target Start/End: Original strand, 26651110 - 26651281
Alignment:
Q  494 gcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcga 593  Q
    |||| |||||| |||||||||||| | |||  ||||||||||| |||||||||||||||||||||  |||||||| ||| |||| || ||||||||||||    
T  26651110 gcaagttttctttaaccaaaactacgaattaacttgttctttgtctgtacattgtcaggaaaccatctgtagtcacctgtctatgtgcattgtcatgcga 26651209  T
Q  594 caagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttg 665  Q
     | |||||||| || ||| || |||| |||| ||| |||||||||||||||||| ||||||| |||| ||||    
T  26651210 tatgtctagagatttctcgcaccacagaatctgttggttgttcgaaagggcagtgagtaatgctatgctttg 26651281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 494 - 665
Target Start/End: Original strand, 26757078 - 26757249
Alignment:
Q  494 gcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcga 593  Q
    |||| |||||| |||||||||||| | |||  ||||||||||| |||||||||||||||||||||  |||||||| ||| |||| || ||||||||||||    
T  26757078 gcaagttttctttaaccaaaactacgaattaacttgttctttgtctgtacattgtcaggaaaccatctgtagtcacctgtctatgtgcattgtcatgcga 26757177  T
Q  594 caagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttg 665  Q
     | |||||||| || ||| || |||| |||| ||| |||||||||||||||||| ||||||| |||| ||||    
T  26757178 tatgtctagagatttctcgcaccacagaatctgttggttgttcgaaagggcagtgagtaatgctatgctttg 26757249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 494 - 675
Target Start/End: Original strand, 26631460 - 26631641
Alignment:
Q  494 gcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcga 593  Q
    |||||||||||||||||||||| ||| |||| |||| |||| || |||||||| ||||||| |||  |||||||||||||| | ||| |||||| | | |    
T  26631460 gcaacttttctctaaccaaaacaaagcatttacttgctcttggaatgtacattttcaggaagccatctgtagtcatctggccacttgcattgtcct-caa 26631558  T
Q  594 caagtctagaggttgctcacagcacataatccgttt-gttgttcgaaagggcagttagtaatgatatgatttgcagctcagtt 675  Q
    || ||||||||||||||| ||||||| |||||||||  |||||| |||||||||| ||||||| |||| || |||||||||||    
T  26631559 catgtctagaggttgctcgcagcacagaatccgtttacttgttccaaagggcagtgagtaatgctatgcttcgcagctcagtt 26631641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 494 - 675
Target Start/End: Original strand, 26737435 - 26737616
Alignment:
Q  494 gcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcga 593  Q
    |||||||||||||||||||||| ||| |||| |||| |||| || |||||||| ||||||| |||  |||||||||||||| | ||| |||||| | | |    
T  26737435 gcaacttttctctaaccaaaacaaagcatttacttgctcttggaatgtacattttcaggaagccatctgtagtcatctggccacttgcattgtcct-caa 26737533  T
Q  594 caagtctagaggttgctcacagcacataatccgttt-gttgttcgaaagggcagttagtaatgatatgatttgcagctcagtt 675  Q
    || ||||||||||||||| ||||||| |||||||||  |||||| |||||||||| ||||||| |||| || |||||||||||    
T  26737534 catgtctagaggttgctcgcagcacagaatccgtttacttgttccaaagggcagtgagtaatgctatgcttcgcagctcagtt 26737616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 485 - 592
Target Start/End: Original strand, 26640665 - 26640772
Alignment:
Q  485 ataatttacgcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaatt 584  Q
    |||||||||| | |||||||||| ||||||||||| |||| || ||||||||||||||||||||||||||||||  |||||| ||||||||||| | |||    
T  26640665 ataatttacggagcttttctctatccaaaactaagcatttactagttctttgactgtacattgtcaggaaaccatctgtagtgatctggctattcgcatt 26640764  T
Q  585 gtcatgcg 592  Q
    ||||||||    
T  26640765 gtcatgcg 26640772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 485 - 592
Target Start/End: Original strand, 26746631 - 26746738
Alignment:
Q  485 ataatttacgcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaatt 584  Q
    |||||||||| | |||||||||| ||||||||||| |||| || ||||||||||||||||||||||||||||||  |||||| ||||||||||| | |||    
T  26746631 ataatttacggagcttttctctatccaaaactaagcatttactagttctttgactgtacattgtcaggaaaccatctgtagtgatctggctattcgcatt 26746730  T
Q  585 gtcatgcg 592  Q
    ||||||||    
T  26746731 gtcatgcg 26746738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 408 - 489
Target Start/End: Original strand, 26627707 - 26627788
Alignment:
Q  408 ataaatagtgccagatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||    
T  26627707 ataaatagtgccgaatccaagatgaatggtgttacaagtaagatccttatacttcgaaagcataaatgcttttaatcataat 26627788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 408 - 489
Target Start/End: Original strand, 26733684 - 26733765
Alignment:
Q  408 ataaatagtgccagatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||    
T  26733684 ataaatagtgccgaatccaagatgaatggtgttacaagtaagatccttatacttcgaaagcataaatgcttttaatcataat 26733765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 486 - 834
Target Start/End: Complemental strand, 27652413 - 27652032
Alignment:
Q  486 taatttacgcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccaca------------------tgtagtc 567  Q
    |||| ||||||||||||||||||||||||||||| |||| ||||||| |||||| |||||||||||||||| |||                  | | |||    
T  27652413 taatatacgcaacttttctctaaccaaaactaagcatttacttgttcattgactttacattgtcaggaaacaacacattgtcaggaaaccatctatggtc 27652314  T
Q  568 atctggctatttgaattgtcatgcgacaagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatga--tatga---- 661  Q
    ||||||||||||| ||||||||| || | |||||||  |||||| || |||| ||||| || ||||||| |||||||||| | ||||||   ||||        
T  27652313 atctggctatttgcattgtcatgtgatatgtctagacattgctcgcaccacaaaatccattggttgttccaaagggcagtgactaatgaataatgacatt 27652214  T
Q  662 -tttgcagctcagttggagtgctttgagaatttcaatcttagtacacaatttggaatctacgtgttcaacaagaaaggaagcatgagagaggatgcggta 760  Q
     |||||||||||||| ||| | ||| |  |||||||||||||||||||| |||||||| || ||||   ||||||| ||||||    |||||||| | ||    
T  27652213 ctttgcagctcagtttgagaggttttaagatttcaatcttagtacacaaattggaatccacatgtt---caagaaaagaagcacagaagaggatgtgata 27652117  T
Q  761 ttcaccaattcttatagaaggagtaa-----------atcagaacttggaattttctgaggcagaacttgtgtagcagcaacaac 834  Q
    |||||| || ||||||||| ||| ||           |||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  27652116 ttcacctatccttatagaaagagaaaagaagatgaagatcagaacttggaagtttctgagacagaacttgcgtagcagcaacaac 27652032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 27715154 - 27715092
Alignment:
Q  80 cagagacagaggaggatatcaatgcttcattgcaacaacaggatttgacgaaagaggaacaaa 142  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27715154 cagagacagaggaggatatcaatgcttcattgcaacagcaggatttgacgaaagaggaacaaa 27715092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 486 - 579
Target Start/End: Original strand, 31291368 - 31291461
Alignment:
Q  486 taatttacgcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctattt 579  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| || |||  |||| ||||||||||  |||| ||||||||||||||    
T  31291368 taatttacgcaacttttctctaacaaaaactaagtattttcttgttcttcgattgtgaattgccaggaaaccatctgtaatcatctggctattt 31291461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 583 - 668
Target Start/End: Original strand, 31289405 - 31289490
Alignment:
Q  583 ttgtcatgcgacaagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttgcag 668  Q
    ||||||||||||| |||||| |||||||| ||||||| |||||||| |||||||||||||||||| ||||||| |||| |||||||    
T  31289405 ttgtcatgcgacatgtctagtggttgctcgcagcacagaatccgttggttgttcgaaagggcagtgagtaatgctatgctttgcag 31289490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 421 - 489
Target Start/End: Complemental strand, 27702738 - 27702670
Alignment:
Q  421 gatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  27702738 gatccaagatgaatggttttacaagtaagatctttatacttcgaaagcataaatggttttaatcataat 27702670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 630 - 769
Target Start/End: Original strand, 26890567 - 26890706
Alignment:
Q  630 gttgttcgaaagggcagttagtaatgatatgatttgcagctcagttggagtgctttgagaatttcaatcttagtacacaatttggaatctacgtgttcaa 729  Q
    ||||||| |||||||||| ||||| | |||| ||||||||||| ||| || | | |||||||||||||| |||||||||| |||||||| | |||||||     
T  26890567 gttgttctaaagggcagtgagtaacggtatgctttgcagctcatttgaagagttatgagaatttcaatcgtagtacacaaattggaatcaatgtgttcag 26890666  T
Q  730 caagaaaggaagcatgagagaggatgcggtattcaccaat 769  Q
     || |||||||||| ||  ||||||| | || ||||||||    
T  26890667 gaaaaaaggaagcacgaaggaggatgtgataatcaccaat 26890706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 25583207 - 25583263
Alignment:
Q  206 tattcagcagtgcacaagatgaaagaaagatgctgggtacattccttggtctaggtc 262  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  25583207 tattaagcagtgcacaagatgaaagaaagatgttgggtacattccttggtttaggtc 25583263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 27078974 - 27079057
Alignment:
Q  94 gatatcaatgcttcattgcaacaacaggatttgacgaaagaggaacaaagaaagacatggggtacattccttagtctaggtgcat 178  Q
    |||||||| ||||| ||||||||| |||| ||||  |||| |||| |||||||||||||||||||||||||| ||||||||||||    
T  27078974 gatatcaa-gcttcgttgcaacaaaaggaattgataaaagtggaagaaagaaagacatggggtacattcctttgtctaggtgcat 27079057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 27423979 - 27423905
Alignment:
Q  231 aaagatgctgggtacattccttggtctaggtccattataaagttaaccgtcttctttgttattctctcaatgtcaa 306  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||  |||||||||||||||| ||||    
T  27423979 aaagatgttgggtacattccttggtctaggttcatcataaagttaaccg-ctttgttgttattctctcaatctcaa 27423905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 334
Target Start/End: Complemental strand, 27662049 - 27661929
Alignment:
Q  213 cagtgcacaagatgaaagaaagatgctgggtacattccttggtctaggtccattataaagttaaccgtcttctttgttattctctcaatgtcaagaatac 312  Q
    ||||| ||||||||||||||| |||  |||||||||||||| || |||| |   |||||||||||||||||  ||||||| |||||||| ||||   | |    
T  27662049 cagtggacaagatgaaagaaatatgtggggtacattccttgatccaggtgcgccataaagttaaccgtctt-gttgttatcctctcaatctcaactttgc 27661951  T
Q  313 aggtttgtgctttgctgtttac 334  Q
    ||||||||||||| ||||||||    
T  27661950 aggtttgtgctttactgtttac 27661929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 258 - 326
Target Start/End: Original strand, 25986741 - 25986808
Alignment:
Q  258 aggtccattataaagttaaccgtcttctttgttattctctcaatgtcaagaatacaggtttgtgctttg 326  Q
    |||||||| |||||||||||||||||| |||||||||||||||| |||| | | |||||||||||||||    
T  25986741 aggtccatcataaagttaaccgtcttc-ttgttattctctcaatctcaacattgcaggtttgtgctttg 25986808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 365 - 409
Target Start/End: Complemental strand, 27714980 - 27714936
Alignment:
Q  365 atgatgcaaggcatgtgcaacatctcaattattgcaacactttat 409  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  27714980 atgatgcaaggcatgtggaacatctcaattattgcaacactttat 27714936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 422 - 489
Target Start/End: Complemental strand, 27660770 - 27660703
Alignment:
Q  422 atccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    |||| ||||||||| |||||||| |||||||||||||||| |||||  |||||| |||||||||||||    
T  27660770 atcctagatgaatgttgttacaagtaagatccttatactttgaaagaataaatgcttttaatcataat 27660703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 27079032 - 27079125
Alignment:
Q  240 gggtacattccttggtctaggtccattataaagttaaccgtcttctttgttattctctcaatgtcaagaatacaggtttgtgctttgctgtttac 334  Q
    ||||||||||||| |||||||| |||||| | |||| || |||| || |||||||||||||| |||| | |  ||||||||||||||||||||||    
T  27079032 gggtacattcctttgtctaggtgcattatgaggttagccatcttgtt-gttattctctcaatctcaacattgaaggtttgtgctttgctgtttac 27079125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 429 - 489
Target Start/End: Original strand, 26650492 - 26650552
Alignment:
Q  429 atgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    ||||||| |||||||| |||||||||||||||| |||| | |||||| |||||||||||||    
T  26650492 atgaatgttgttacaagtaagatccttatactttgaaaccataaatgcttttaatcataat 26650552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 429 - 489
Target Start/End: Original strand, 26756460 - 26756520
Alignment:
Q  429 atgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    ||||||| |||||||| |||||||||||||||| |||| | |||||| |||||||||||||    
T  26756460 atgaatgttgttacaagtaagatccttatactttgaaaccataaatgcttttaatcataat 26756520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 26852258 - 26852297
Alignment:
Q  143 gaaagacatggggtacattccttagtctaggtgcatcaaa 182  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  26852258 gaaagacttggggtacattccttagtctaggtgcatcaaa 26852297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 431 - 489
Target Start/End: Original strand, 26807072 - 26807130
Alignment:
Q  431 gaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    ||||| |||||||| |||||||||||||||| |||||| |||||| ||||| |||||||    
T  26807072 gaatgttgttacaagtaagatccttatactttgaaagcataaatgcttttagtcataat 26807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 489
Target Start/End: Original strand, 26639748 - 26639800
Alignment:
Q  437 tgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    |||||||| |||||||||||||||| |||| | |||||| |||||||||||||    
T  26639748 tgttacaagtaagatccttatactttgaaaacataaatgcttttaatcataat 26639800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 489
Target Start/End: Original strand, 26745714 - 26745766
Alignment:
Q  437 tgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    |||||||| |||||||||||||||| |||| | |||||| |||||||||||||    
T  26745714 tgttacaagtaagatccttatactttgaaaacataaatgcttttaatcataat 26745766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 792
Target Start/End: Original strand, 26828527 - 26828650
Alignment:
Q  669 ctcagttggagtgctttgagaatttcaatcttagtacacaatttggaatctacgtgttcaacaagaaaggaagcatgagagaggatgcggtattcaccaa 768  Q
    |||||||| || | ||| |||||||||||||||||| |||| ||||| || || ||| ||| |||||| ||||||||   ||||| | ||| ||||||||    
T  26828527 ctcagttgaagagttttcagaatttcaatcttagtatacaaattggattccacttgtccaagaagaaatgaagcatggaggaggacgaggttttcaccaa 26828626  T
Q  769 ttcttatagaaggagtaaatcaga 792  Q
    | | ||  ||| ||||||||||||    
T  26828627 tccatacggaaagagtaaatcaga 26828650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 25514427 - 25514480
Alignment:
Q  272 gttaaccgtcttctttgttattctctcaatgtcaagaatacaggtttgtgctttg 326  Q
    ||||||||||||||| |||||||||||||| |||| | | |||||||||||||||    
T  25514427 gttaaccgtcttctt-gttattctctcaatctcaacattgcaggtttgtgctttg 25514480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 427 - 489
Target Start/End: Complemental strand, 27419522 - 27419460
Alignment:
Q  427 agatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    ||||||||| |||||||| |||||||||||||||| |||||| ||| |  || ||||||||||    
T  27419522 agatgaatgctgttacaagtaagatccttatactttgaaagcataagttcttataatcataat 27419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 801 - 834
Target Start/End: Complemental strand, 27713875 - 27713842
Alignment:
Q  801 ttttctgaggcagaacttgtgtagcagcaacaac 834  Q
    ||||||||| ||||||||||||||||||||||||    
T  27713875 ttttctgagacagaacttgtgtagcagcaacaac 27713842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 87; Significance: 3e-41; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 494 - 628
Target Start/End: Original strand, 64725 - 64859
Alignment:
Q  494 gcaacttttctctaaccaaaactaagtattttcttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcga 593  Q
    |||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  64725 gcaacttttctctaacgaaaactaagcatttacttgttctttgtctgtacattgtcaggaaaccatctgtagtcatctggctatttgcattgtcatgcga 64824  T
Q  594 caagtctagaggttgctcacagcacataatccgtt 628  Q
    || |||||||| |||||| ||||| | ||||||||    
T  64825 catgtctagagattgctcgcagcatagaatccgtt 64859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 63384 - 63458
Alignment:
Q  231 aaagatgctgggtacattccttggtctaggtccattataaagttaaccgtcttctttgttattctctcaatgtcaa 306  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||  |||||||||||||||| ||||    
T  63384 aaagatgttgggtacattccttggtctaggttcatcataaagttaaccg-ctttgttgttattctctcaatctcaa 63458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 427 - 489
Target Start/End: Original strand, 67841 - 67903
Alignment:
Q  427 agatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    ||||||||| |||||||| |||||||||||||||| |||||| ||| |  || ||||||||||    
T  67841 agatgaatgctgttacaagtaagatccttatactttgaaagcataagttcttataatcataat 67903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 7e-33; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 586 - 792
Target Start/End: Complemental strand, 18692494 - 18692287
Alignment:
Q  586 tcatgcgacaagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttgcagctcagttggagtgcttt 685  Q
    |||||||||||||||| |||| ||||  |   || |||||||| |||||||||||||||||| |||| ||||||| |||||| ||||||||||| | |||    
T  18692494 tcatgcgacaagtctacaggtcgctcgtacttcagaatccgttggttgttcgaaagggcagtgagtattgatatgctttgcacctcagttggagagtttt 18692395  T
Q  686 gagaatttcaatcttagtacacaatttggaatctac-gtgttcaacaagaaaggaagcatgagag-aggatgcggtattcaccaattcttatagaaggag 783  Q
    ||||||||||||||||||| |||| || ||||| || |||||||| ||||||  ||||||| ||| |||||| | |||||| |||| ||||||||| |||    
T  18692394 gagaatttcaatcttagtagacaaattagaatccactgtgttcaagaagaaaaaaagcatg-gagcaggatgtgatattcatcaatccttatagaaagag 18692296  T
Q  784 taaatcaga 792  Q
     ||||||||    
T  18692295 aaaatcaga 18692287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 530 - 676
Target Start/End: Original strand, 5083123 - 5083269
Alignment:
Q  530 ttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcgacaagtctagaggttgctcacagcacataatccgttt 629  Q
    |||||| ||||||||||| ||| ||||||  ||||||  ||||||| |||| |||||||| ||| | |||||||||| |||||   |||| |||||||      
T  5083123 ttcttttactgtacattgacagaaaaccatctgtagttgtctggctttttgcattgtcatacgagatgtctagaggtggctcaatccacagaatccgtgg 5083222  T
Q  630 gttgttcgaaagggcagttagtaatgatatgatttgcagctcagttg 676  Q
     ||||| ||||||||||| |||||||||||| |||||||||||||||    
T  5083223 attgtttgaaagggcagtgagtaatgatatgctttgcagctcagttg 5083269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 408 - 489
Target Start/End: Complemental strand, 18675137 - 18675056
Alignment:
Q  408 ataaatagtgccagatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    |||||| ||||| ||||| ||||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  18675137 ataaattgtgccggatcctagatgaatgttgttacaagtaagatccttatactttgaaagcataaatggttttaatcataat 18675056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 408 - 489
Target Start/End: Complemental strand, 18685710 - 18685629
Alignment:
Q  408 ataaatagtgccagatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    |||||| ||||| ||||| ||||||||  |||||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  18685710 ataaattgtgccggatcctagatgaattttgttacaagtaagatccttatactttgaaagcataaatggttttaatcataat 18685629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 408 - 491
Target Start/End: Complemental strand, 18683454 - 18683371
Alignment:
Q  408 ataaatagtgccagatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataattt 491  Q
    |||||| ||||| ||||| | ||||||| |||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||    
T  18683454 ataaattgtgccggatcctacatgaatgttgttacaagtaagatccttatactttgaaagcataaattgttttaatcataattt 18683371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 408 - 489
Target Start/End: Complemental strand, 18719667 - 18719586
Alignment:
Q  408 ataaatagtgccagatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    |||||| ||||| ||||| ||||||||  |||||||| |||||||||||||||| ||||||  |||||||||||||||||||    
T  18719667 ataaattgtgccggatcctagatgaatattgttacaagtaagatccttatactttgaaagcaaaaatggttttaatcataat 18719586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 489
Target Start/End: Complemental strand, 18693179 - 18693111
Alignment:
Q  421 gatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    ||||| ||||||||| |||||||| |||||||||||||| | |||||| ||||||||||||||||||||    
T  18693179 gatcctagatgaatgttgttacaagtaagatccttataccttgaaagcataaatggttttaatcataat 18693111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 586 - 718
Target Start/End: Complemental strand, 18674423 - 18674282
Alignment:
Q  586 tcatgcgacaagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttgca---------gctcagttg 676  Q
    |||||||||||||||| |||| |||| ||   |  |||||||| |||| ||||||||||||| |||| ||||||| ||||||         |||||||||    
T  18674423 tcatgcgacaagtctacaggtcgctcgcattgctgaatccgttggttgatcgaaagggcagtgagtattgatatgctttgcacctcagttagctcagttg 18674324  T
Q  677 gagtgctttgagaatttcaatcttagtacacaatttggaatc 718  Q
    ||| | |||||||||||||||||||||| |||| ||||||||    
T  18674323 gagagttttgagaatttcaatcttagtagacaaattggaatc 18674282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 421 - 489
Target Start/End: Complemental strand, 18651005 - 18650937
Alignment:
Q  421 gatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    ||||| ||||||||| |||| ||| |||||||||||||||| |||||  ||||||||||||||||||||    
T  18651005 gatcctagatgaatgttgttgcaagtaagatccttatactttgaaagtataaatggttttaatcataat 18650937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 427 - 489
Target Start/End: Complemental strand, 18726945 - 18726883
Alignment:
Q  427 agatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcataat 489  Q
    ||||||||  |||||||| |||||||||||||||| ||||||  |||||||||||||||||||    
T  18726945 agatgaatattgttacaagtaagatccttatactttgaaagcaaaaatggttttaatcataat 18726883  T

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Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 674 - 792
Target Start/End: Complemental strand, 18650670 - 18650551
Alignment:
Q  674 ttggagtgctttgagaatttcaatcttagtacacaatttggaatctac-gtgttcaacaagaaaggaagcatgagag-aggatgcggtattcaccaattc 771  Q
    |||||| | |||||||| ||||||||||||| |||| |||||||| ||  ||||||| |||||| | ||||| |||| |||||| | ||||||||||| |    
T  18650670 ttggagagttttgagaaattcaatcttagtagacaaattggaatccactttgttcaagaagaaaagcagcat-agagcaggatgtgatattcaccaatcc 18650572  T
Q  772 ttatagaaggagtaaatcaga 792  Q
    ||||||||  || ||||||||    
T  18650571 ttatagaaacagaaaatcaga 18650551  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 421 - 487
Target Start/End: Original strand, 5082450 - 5082516
Alignment:
Q  421 gatccaagatgaatggtgttacaaataagatccttatacttcgaaagcttaaatggttttaatcata 487  Q
    ||||| ||||||| | |||||||| |||||||||||| ||| |||||  |||||| |||||||||||    
T  5082450 gatcctagatgaacgctgttacaagtaagatccttatgctttgaaagtataaatgcttttaatcata 5082516  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 683 - 792
Target Start/End: Complemental strand, 18683082 - 18682973
Alignment:
Q  683 tttgagaatttcaatcttagtacacaatttggaatctacgtgttcaacaagaaaggaagcatgagag-aggatgcggtattcaccaattcttatagaagg 781  Q
    |||||||||||||||||||||| |||| ||| |||| ||   ||||| ||||||  |||||| |||| |||||| | |||||| |||| ||||||||| |    
T  18683082 tttgagaatttcaatcttagtagacaaattgcaatccactgattcaagaagaaaataagcat-agagcaggatgtgatattcatcaatccttatagaaag 18682984  T
Q  782 agtaaatcaga 792  Q
    || ||||||||    
T  18682983 agaaaatcaga 18682973  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 664 - 792
Target Start/End: Complemental strand, 18718899 - 18718770
Alignment:
Q  664 tgcagctcagttggagtgctttgagaatttcaatcttagtacacaatttggaatctac-gtgttcaacaagaaaggaagcatgagag-aggatgcggtat 761  Q
    ||||||||| |||||| | ||| |||| ||||||||||||| | || |||||||| || |||||||| |||||| | ||||| |||| |||||| | |||    
T  18718899 tgcagctcacttggagagtttttagaaattcaatcttagtagaaaaattggaatccactgtgttcaagaagaaaagcagcat-agagcaggatgtgatat 18718801  T
Q  762 tcaccaattcttatagaaggagtaaatcaga 792  Q
    || ||||| |||||||||  || ||||||||    
T  18718800 tctccaatccttatagaaacagaaaatcaga 18718770  T

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Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 586 - 676
Target Start/End: Complemental strand, 18718993 - 18718903
Alignment:
Q  586 tcatgcgacaagtctagaggttgctcacagcacataatccgtttgttgttcgaaagggcagttagtaatgatatgatttgcagctcagttg 676  Q
    |||||||||||||||| |||| |||| ||   || | || ||| |||||||||| ||||||| |||| ||||||| |||||| ||||||||    
T  18718993 tcatgcgacaagtctaaaggtcgctcgcactgcagattctgttggttgttcgaacgggcagtgagtattgatatgctttgcacctcagttg 18718903  T

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Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 519
Target Start/End: Complemental strand, 18674483 - 18674450
Alignment:
Q  486 taatttacgcaacttttctctaaccaaaactaag 519  Q
    |||||||| |||||||||||||||||||||||||    
T  18674483 taatttacacaacttttctctaaccaaaactaag 18674450  T

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Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 519
Target Start/End: Complemental strand, 18692554 - 18692521
Alignment:
Q  486 taatttacgcaacttttctctaaccaaaactaag 519  Q
    |||||||| |||||||||||||||||||||||||    
T  18692554 taatttacacaacttttctctaaccaaaactaag 18692521  T

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Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 519
Target Start/End: Complemental strand, 18719053 - 18719020
Alignment:
Q  486 taatttacgcaacttttctctaaccaaaactaag 519  Q
    |||||||| |||||||||||||||||||||||||    
T  18719053 taatttacacaacttttctctaaccaaaactaag 18719020  T

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Target: chr1 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 612
Target Start/End: Original strand, 26141211 - 26141296
Alignment:
Q  527 ttgttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttgaattgtcatgcgacaagtctagaggttgctca 612  Q
    ||||||||||| ||||||||||||| ||||||  | ||||  |||||||||||| |||||||| | | | |||||||||| |||||    
T  26141211 ttgttctttgaatgtacattgtcagaaaaccatctatagttgtctggctatttgcattgtcattctagatgtctagaggtggctca 26141296  T

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Target: scaffold0277 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 530 - 580
Target Start/End: Complemental strand, 874 - 824
Alignment:
Q  530 ttctttgactgtacattgtcaggaaaccacatgtagtcatctggctatttg 580  Q
    ||||||||| |||||||||||||||||||  ||||||| ||||||| ||||    
T  874 ttctttgacagtacattgtcaggaaaccatctgtagtcgtctggctttttg 824  T

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