View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1359_low_30 (Length: 351)

Name: NF1359_low_30
Description: NF1359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1359_low_30
NF1359_low_30
[»] chr5 (47 HSPs)
chr5 (167-322)||(22536698-22536853)
chr5 (168-322)||(10592844-10592997)
chr5 (168-311)||(29719965-29720109)
chr5 (165-322)||(40379675-40379832)
chr5 (168-311)||(9789665-9789809)
chr5 (168-311)||(18442089-18442233)
chr5 (168-311)||(29722152-29722296)
chr5 (168-322)||(16546216-16546370)
chr5 (168-322)||(40381889-40382043)
chr5 (168-292)||(29752265-29752390)
chr5 (168-311)||(30631805-30631948)
chr5 (168-311)||(26177466-26177610)
chr5 (167-311)||(27450266-27450410)
chr5 (168-322)||(16543994-16544148)
chr5 (168-322)||(25077706-25077860)
chr5 (168-322)||(25135675-25135829)
chr5 (168-311)||(1456638-1456781)
chr5 (168-311)||(27445423-27445566)
chr5 (168-294)||(29751597-29751724)
chr5 (168-311)||(43599174-43599318)
chr5 (168-311)||(43604666-43604810)
chr5 (168-311)||(43610158-43610302)
chr5 (180-307)||(26170370-26170497)
chr5 (181-311)||(24136340-24136470)
chr5 (166-311)||(29402548-29402693)
chr5 (168-311)||(9352807-9352951)
chr5 (167-311)||(15045137-15045280)
chr5 (168-291)||(15465001-15465125)
chr5 (168-311)||(16407641-16407785)
chr5 (175-323)||(28807083-28807231)
chr5 (168-311)||(16409077-16409221)
chr5 (180-291)||(36931856-36931967)
chr5 (230-311)||(31180706-31180787)
chr5 (168-224)||(31180774-31180830)
chr5 (168-224)||(43592798-43592854)
chr5 (230-311)||(43592729-43592811)
chr5 (167-322)||(37556124-37556279)
chr5 (180-322)||(37560959-37561101)
chr5 (175-311)||(2785819-2785955)
chr5 (175-311)||(33768628-33768764)
chr5 (175-311)||(33791760-33791896)
chr5 (175-224)||(14520797-14520846)
chr5 (168-217)||(35388196-35388246)
chr5 (168-211)||(43625605-43625648)
chr5 (175-224)||(12083658-12083707)
chr5 (250-311)||(38219886-38219947)
chr5 (180-220)||(11916457-11916497)
[»] chr3 (68 HSPs)
chr3 (167-322)||(6716084-6716239)
chr3 (168-322)||(54634710-54634864)
chr3 (167-322)||(25637012-25637167)
chr3 (168-322)||(3617034-3617188)
chr3 (167-311)||(40372255-40372399)
chr3 (168-322)||(8477848-8478002)
chr3 (168-311)||(800685-800829)
chr3 (168-311)||(22172662-22172805)
chr3 (230-322)||(6718331-6718423)
chr3 (168-322)||(4598952-4599107)
chr3 (168-322)||(4601173-4601328)
chr3 (166-311)||(7167739-7167884)
chr3 (168-322)||(10208778-10208933)
chr3 (164-311)||(28501148-28501295)
chr3 (168-322)||(10055805-10055960)
chr3 (168-322)||(10058027-10058182)
chr3 (168-322)||(10060249-10060404)
chr3 (168-322)||(10062471-10062626)
chr3 (168-322)||(10064693-10064848)
chr3 (168-322)||(10066915-10067070)
chr3 (168-311)||(1306460-1306604)
chr3 (164-311)||(18656885-18657033)
chr3 (168-308)||(28503319-28503459)
chr3 (168-311)||(37408036-37408179)
chr3 (166-322)||(45282583-45282720)
chr3 (168-322)||(10210978-10211133)
chr3 (167-311)||(37726155-37726300)
chr3 (168-291)||(7782588-7782712)
chr3 (168-311)||(23198386-23198530)
chr3 (168-311)||(23200585-23200729)
chr3 (168-311)||(33386137-33386281)
chr3 (165-311)||(26928077-26928224)
chr3 (167-311)||(27352080-27352224)
chr3 (168-311)||(27453437-27453581)
chr3 (214-311)||(2671111-2671208)
chr3 (168-224)||(6718288-6718344)
chr3 (230-311)||(8738585-8738666)
chr3 (230-311)||(9090823-9090904)
chr3 (230-311)||(27986001-27986082)
chr3 (180-311)||(2672431-2672562)
chr3 (230-311)||(32143803-32143884)
chr3 (168-224)||(8738542-8738598)
chr3 (168-224)||(9090780-9090836)
chr3 (177-224)||(40734084-40734131)
chr3 (180-242)||(2676587-2676649)
chr3 (175-224)||(16264897-16264946)
chr3 (175-224)||(21711769-21711818)
chr3 (175-224)||(30709266-30709315)
chr3 (168-224)||(32143871-32143928)
chr3 (175-224)||(36029660-36029709)
chr3 (180-224)||(27027274-27027318)
chr3 (180-224)||(27974446-27974490)
chr3 (175-311)||(8512684-8512820)
chr3 (230-307)||(27974477-27974554)
chr3 (175-224)||(39032025-39032074)
chr3 (175-218)||(1730916-1730959)
chr3 (175-311)||(24968561-24968697)
chr3 (181-224)||(27985971-27986014)
chr3 (177-224)||(40735015-40735062)
chr3 (162-224)||(40845222-40845285)
chr3 (273-311)||(8517564-8517602)
chr3 (175-224)||(27038609-27038658)
chr3 (173-242)||(32475997-32476066)
chr3 (173-242)||(32480855-32480924)
chr3 (175-224)||(35926058-35926106)
chr3 (175-224)||(40592252-40592301)
chr3 (175-224)||(48438783-48438832)
chr3 (168-224)||(16498637-16498693)
[»] chr6 (44 HSPs)
chr6 (167-322)||(16578947-16579102)
chr6 (167-322)||(16616278-16616433)
chr6 (176-322)||(27647476-27647622)
chr6 (168-322)||(16554454-16554608)
chr6 (168-322)||(16631010-16631164)
chr6 (165-322)||(6136393-6136550)
chr6 (166-311)||(30125016-30125161)
chr6 (166-311)||(411683-411829)
chr6 (168-322)||(25420797-25420951)
chr6 (168-311)||(3073199-3073343)
chr6 (168-311)||(11857424-11857567)
chr6 (181-322)||(2171949-2172090)
chr6 (168-322)||(33342533-33342688)
chr6 (168-322)||(34166666-34166821)
chr6 (168-322)||(6026834-6026988)
chr6 (168-311)||(14741926-14742069)
chr6 (168-311)||(22010189-22010332)
chr6 (166-291)||(6097862-6097988)
chr6 (166-322)||(34164442-34164599)
chr6 (180-322)||(5674242-5674384)
chr6 (167-322)||(13150848-13151004)
chr6 (168-311)||(22709501-22709645)
chr6 (167-311)||(6438940-6439084)
chr6 (230-322)||(16652759-16652851)
chr6 (166-271)||(34151826-34151931)
chr6 (168-291)||(26253589-26253713)
chr6 (230-311)||(5266529-5266610)
chr6 (168-224)||(16652716-16652772)
chr6 (180-311)||(23896813-23896944)
chr6 (168-224)||(5266597-5266653)
chr6 (168-224)||(14737085-14737141)
chr6 (264-322)||(28155167-28155225)
chr6 (199-311)||(5756983-5757095)
chr6 (175-311)||(16839187-16839323)
chr6 (175-311)||(33329940-33330076)
chr6 (230-311)||(14737128-14737209)
chr6 (175-223)||(28155097-28155145)
chr6 (175-311)||(33335437-33335573)
chr6 (175-224)||(5016976-5017025)
chr6 (175-224)||(31085953-31086002)
chr6 (175-242)||(5343990-5344057)
chr6 (175-311)||(6005863-6005999)
chr6 (175-220)||(21272469-21272514)
chr6 (176-224)||(5571757-5571805)
[»] chr7 (35 HSPs)
chr7 (168-322)||(20343500-20343654)
chr7 (168-322)||(24789426-24789581)
chr7 (167-322)||(32060734-32060889)
chr7 (168-322)||(18392626-18392780)
chr7 (168-322)||(6592767-6592921)
chr7 (168-311)||(21640280-21640423)
chr7 (180-311)||(43504577-43504708)
chr7 (167-322)||(6594983-6595138)
chr7 (168-311)||(2058462-2058604)
chr7 (168-307)||(20357028-20357167)
chr7 (167-311)||(12406714-12406858)
chr7 (166-246)||(1562509-1562589)
chr7 (167-311)||(48408397-48408542)
chr7 (168-308)||(4873581-4873721)
chr7 (168-311)||(39730933-39731077)
chr7 (180-311)||(21646499-21646630)
chr7 (180-311)||(24023831-24023962)
chr7 (168-311)||(18409255-18409399)
chr7 (168-311)||(18414131-18414275)
chr7 (180-322)||(21811751-21811893)
chr7 (180-311)||(47264123-47264254)
chr7 (168-270)||(12397390-12397492)
chr7 (180-311)||(25767402-25767527)
chr7 (211-321)||(1532947-1533057)
chr7 (168-311)||(31109070-31109214)
chr7 (180-311)||(2479816-2479947)
chr7 (168-225)||(18390505-18390562)
chr7 (175-311)||(21983723-21983859)
chr7 (164-244)||(44847615-44847696)
chr7 (180-311)||(21989388-21989518)
chr7 (180-222)||(1532897-1532939)
chr7 (266-322)||(18389190-18389246)
chr7 (276-322)||(1562433-1562479)
chr7 (175-224)||(79956-80005)
chr7 (175-311)||(24265684-24265820)
[»] chr8 (29 HSPs)
chr8 (168-322)||(3439088-3439241)
chr8 (163-311)||(4759529-4759677)
chr8 (168-311)||(10683739-10683882)
chr8 (168-311)||(30656139-30656282)
chr8 (168-311)||(33037287-33037430)
chr8 (168-311)||(36979871-36980014)
chr8 (168-311)||(18852627-18852770)
chr8 (168-311)||(2627318-2627462)
chr8 (175-311)||(6311792-6311928)
chr8 (168-311)||(18870021-18870164)
chr8 (230-322)||(25689604-25689695)
chr8 (168-322)||(42575754-42575909)
chr8 (168-311)||(39784325-39784468)
chr8 (181-311)||(1261428-1261558)
chr8 (168-322)||(15290143-15290298)
chr8 (168-322)||(15470512-15470667)
chr8 (168-291)||(31042908-31043032)
chr8 (166-308)||(26288376-26288519)
chr8 (166-308)||(26301633-26301776)
chr8 (166-308)||(26313627-26313770)
chr8 (168-311)||(7289427-7289571)
chr8 (167-311)||(25327663-25327807)
chr8 (180-311)||(7412808-7412939)
chr8 (166-224)||(25689559-25689617)
chr8 (230-311)||(10688661-10688742)
chr8 (168-224)||(10688618-10688674)
chr8 (175-224)||(5701959-5702008)
chr8 (175-311)||(35745835-35745971)
chr8 (180-224)||(4456576-4456620)
[»] chr1 (29 HSPs)
chr1 (168-322)||(9036003-9036157)
chr1 (168-322)||(20622666-20622821)
chr1 (168-311)||(21053540-21053683)
chr1 (168-311)||(40281958-40282102)
chr1 (167-322)||(44203217-44203372)
chr1 (168-311)||(9986785-9986929)
chr1 (168-311)||(19360912-19361056)
chr1 (168-311)||(19365768-19365912)
chr1 (168-311)||(44023377-44023520)
chr1 (164-322)||(39445928-39446086)
chr1 (168-291)||(24202251-24202375)
chr1 (180-307)||(41391047-41391173)
chr1 (165-311)||(51764987-51765134)
chr1 (175-322)||(25439406-25439553)
chr1 (168-307)||(13604095-13604235)
chr1 (175-323)||(25444599-25444747)
chr1 (168-311)||(1054514-1054657)
chr1 (230-311)||(24793709-24793790)
chr1 (168-224)||(24793666-24793722)
chr1 (175-311)||(26644381-26644517)
chr1 (248-311)||(24786905-24786968)
chr1 (175-224)||(13598968-13599017)
chr1 (230-311)||(41398698-41398778)
chr1 (180-224)||(21536125-21536169)
chr1 (180-224)||(41398765-41398809)
chr1 (181-224)||(37070335-37070378)
chr1 (180-224)||(3282274-3282318)
chr1 (168-224)||(13659841-13659897)
chr1 (184-224)||(16124197-16124237)
[»] scaffold0565 (1 HSPs)
scaffold0565 (168-322)||(3031-3185)
[»] chr2 (25 HSPs)
chr2 (167-312)||(12647823-12647968)
chr2 (164-311)||(9295858-9296005)
chr2 (168-311)||(14291982-14292125)
chr2 (168-311)||(6266274-6266418)
chr2 (167-311)||(11098386-11098530)
chr2 (167-322)||(3492222-3492378)
chr2 (168-311)||(30832921-30833065)
chr2 (180-311)||(25410122-25410253)
chr2 (167-311)||(4484779-4484924)
chr2 (167-311)||(39811476-39811620)
chr2 (168-311)||(32289148-32289292)
chr2 (166-291)||(32247229-32247354)
chr2 (168-290)||(40739334-40739457)
chr2 (168-245)||(44310471-44310548)
chr2 (175-224)||(8389631-8389680)
chr2 (230-311)||(28258713-28258794)
chr2 (175-224)||(10706733-10706782)
chr2 (181-311)||(19349724-19349854)
chr2 (175-224)||(21630512-21630561)
chr2 (175-220)||(33528105-33528150)
chr2 (175-224)||(36757425-36757474)
chr2 (175-224)||(39483444-39483493)
chr2 (175-219)||(20522794-20522838)
chr2 (180-224)||(28258682-28258726)
chr2 (175-224)||(23077952-23078001)
[»] chr4 (37 HSPs)
chr4 (168-311)||(31495758-31495902)
chr4 (168-322)||(7122267-7122421)
chr4 (168-322)||(7124489-7124643)
chr4 (168-322)||(8392982-8393136)
chr4 (168-311)||(24742434-24742577)
chr4 (168-322)||(8395191-8395345)
chr4 (168-311)||(13992735-13992879)
chr4 (168-311)||(9223899-9224042)
chr4 (168-311)||(51520907-51521050)
chr4 (168-311)||(56141511-56141655)
chr4 (168-311)||(9228686-9228829)
chr4 (167-322)||(5135648-5135804)
chr4 (168-322)||(5137875-5138030)
chr4 (164-311)||(5733103-5733251)
chr4 (168-311)||(18856166-18856309)
chr4 (168-311)||(28467977-28468121)
chr4 (166-311)||(3814463-3814607)
chr4 (175-311)||(45347324-45347460)
chr4 (167-286)||(18860403-18860522)
chr4 (167-291)||(31985126-31985251)
chr4 (208-311)||(18712295-18712398)
chr4 (230-311)||(29761115-29761196)
chr4 (175-311)||(5148158-5148294)
chr4 (166-224)||(29761183-29761241)
chr4 (175-224)||(3778116-3778165)
chr4 (175-224)||(5143810-5143859)
chr4 (175-224)||(8689044-8689093)
chr4 (175-224)||(16628353-16628402)
chr4 (175-224)||(38151918-38151967)
chr4 (175-224)||(5268699-5268748)
chr4 (175-224)||(6742896-6742945)
chr4 (175-224)||(10047933-10047982)
chr4 (175-224)||(16622774-16622823)
chr4 (231-311)||(45356861-45356941)
chr4 (175-224)||(54867746-54867795)
chr4 (180-224)||(36314716-36314760)
chr4 (180-224)||(36328925-36328969)
[»] scaffold0674 (1 HSPs)
scaffold0674 (168-322)||(4156-4310)
[»] scaffold0137 (1 HSPs)
scaffold0137 (168-322)||(5859-6014)
[»] scaffold0188 (1 HSPs)
scaffold0188 (167-307)||(17430-17571)
[»] scaffold0491 (2 HSPs)
scaffold0491 (168-311)||(9165-9308)
scaffold0491 (166-311)||(11610-11755)
[»] scaffold0286 (1 HSPs)
scaffold0286 (181-322)||(21953-22094)
[»] scaffold0464 (1 HSPs)
scaffold0464 (167-311)||(802-946)
[»] scaffold0355 (1 HSPs)
scaffold0355 (167-311)||(3336-3480)
[»] scaffold0006 (4 HSPs)
scaffold0006 (168-307)||(132752-132892)
scaffold0006 (175-224)||(6253-6302)
scaffold0006 (175-224)||(3061-3110)
scaffold0006 (168-224)||(149602-149658)
[»] scaffold0135 (1 HSPs)
scaffold0135 (168-311)||(34554-34697)
[»] scaffold0140 (1 HSPs)
scaffold0140 (168-291)||(7911-8035)
[»] scaffold1519 (1 HSPs)
scaffold1519 (208-311)||(523-626)
[»] scaffold1455 (1 HSPs)
scaffold1455 (168-243)||(1709-1784)
[»] scaffold0087 (2 HSPs)
scaffold0087 (180-307)||(43447-43574)
scaffold0087 (175-224)||(36332-36381)
[»] scaffold0510 (1 HSPs)
scaffold0510 (180-311)||(1096-1227)
[»] scaffold0665 (2 HSPs)
scaffold0665 (168-224)||(8217-8273)
scaffold0665 (230-311)||(8149-8230)
[»] scaffold0259 (1 HSPs)
scaffold0259 (175-311)||(1746-1882)
[»] scaffold0028 (1 HSPs)
scaffold0028 (175-311)||(148451-148587)
[»] scaffold0098 (2 HSPs)
scaffold0098 (167-220)||(45751-45805)
scaffold0098 (264-311)||(45679-45726)
[»] scaffold0197 (1 HSPs)
scaffold0197 (175-311)||(13791-13927)
[»] scaffold0009 (1 HSPs)
scaffold0009 (175-311)||(176457-176593)


Alignment Details
Target: chr5 (Bit Score: 148; Significance: 5e-78; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 167 - 322
Target Start/End: Complemental strand, 22536853 - 22536698
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22536853 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttg 22536754  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22536753 cagggtgcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttg 22536698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 10592844 - 10592997
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||||    
T  10592844 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacga-ttccgggtgccgtgagataggttgc 10592942  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  10592943 agggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttg 10592997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 29719965 - 29720109
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||  ||    
T  29719965 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 29720064  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  29720065 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgat 29720109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 165 - 322
Target Start/End: Original strand, 40379675 - 40379832
Alignment:
Q  165 aattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-gg 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| || | |||||||||||||| ||    
T  40379675 aattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctaggg 40379773  T
Q  264 ttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||||| ||||| |||||||  || ||||||||||||||||||||||||||    
T  40379774 ttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttg 40379832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 9789809 - 9789665
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| | ||||||||||| | |||    
T  9789809 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9789710  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  9789709 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgat 9789665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 18442233 - 18442089
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||  | ||||||||||| | |||    
T  18442233 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 18442134  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  18442133 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgat 18442089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 29722152 - 29722296
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| ||||| |||||||||  ||    
T  29722152 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgctgtgagctagtctg 29722251  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    || ||||| |||||||| |||||||||||||||||||||||||||    
T  29722252 catggtgccaaatcgtgacacgattgtgggaaatcgtgacacgat 29722296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 16546216 - 16546370
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||| || | |||||||||||||| |||||    
T  16546216 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttg 16546314  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||| ||||| |||||||  || ||||||||||||||||||||||||||    
T  16546315 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttg 16546370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 40381889 - 40382043
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| |||||||||||| || | |||||||||||||| |||||    
T  40381889 tgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttg 40381987  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||| ||||| |||||||  || ||||||||||||||||||||||||||    
T  40381988 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttg 40382043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 168 - 292
Target Start/End: Complemental strand, 29752390 - 29752265
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| | |||||||||||||||||    
T  29752390 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagctaggttg 29752291  T
Q  267 cagggtgcaaaatcgtggcacgattg 292  Q
    |||||||| |||||||||||||||||    
T  29752290 cagggtgccaaatcgtggcacgattg 29752265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 30631948 - 30631805
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| |||||||||||| || ||||    
T  30631948 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgc 30631849  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||| ||||||| |||||||||||||||||||    
T  30631848 aggacgccaaatcgtgacacgattttgggaaatcgtgacacgat 30631805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 26177466 - 26177610
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| | ||||||||||| | |||    
T  26177466 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 26177565  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||    
T  26177566 cagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgat 26177610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 27450410 - 27450266
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  || |||||||||||| |||    
T  27450410 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttg 27450311  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||  || |||||||||||||||  |||||||||||||||||||    
T  27450310 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 27450266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 16543994 - 16544148
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||| || | ||||| |||||||| ||||     
T  16543994 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgctgtgagctagggtta 16544092  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||| ||||| |||||||  || ||||||||||||||||||||||||||    
T  16544093 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttg 16544148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 25077706 - 25077860
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| || | |||||||||||||| |||||    
T  25077706 tgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcga-ttggaggtgccgtgagctagggttg 25077804  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
     | |||||| |||||||| ||||||||||||||||||||||||||||  ||||||||    
T  25077805 taggggtgc-aaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttg 25077860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 25135675 - 25135829
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| || | |||||||||||||| |||||    
T  25135675 tgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcga-ttggaggtgccgtgagctagggttg 25135773  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
     | |||||| |||||||| ||||||||||||||||||||||||||||  ||||||||    
T  25135774 taggggtgc-aaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttg 25135829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 1456638 - 1456781
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  || |||||||||||| || |    
T  1456638 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttac 1456737  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  1456738 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 1456781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 27445566 - 27445423
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||  || |||||||||||| ||||    
T  27445566 tgttgatattggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 27445467  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  27445466 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 27445423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 29751724 - 29751597
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| || | ||| |||  |||||||||||| |||||||||||||||||||    
T  29751724 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagctaggttg 29751625  T
Q  267 cagggtgcaaaatcgtggcacgattgtg 294  Q
    |||||||| |||||||| ||||||||||    
T  29751624 cagggtgccaaatcgtgacacgattgtg 29751597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 43599318 - 43599174
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttc-ggggtgccgtgagctaggttg 266  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||||||||||||  ||| |||||||||||| |||    
T  43599318 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttg 43599219  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||  || |||||||||||||||  |||||||||||||||||||    
T  43599218 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 43599174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 43604810 - 43604666
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttc-ggggtgccgtgagctaggttg 266  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||||||||||||  ||| |||||||||||| |||    
T  43604810 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttg 43604711  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||  || |||||||||||||||  |||||||||||||||||||    
T  43604710 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 43604666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 43610302 - 43610158
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttc-ggggtgccgtgagctaggttg 266  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||||||||||||  ||| |||||||||||| |||    
T  43610302 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttg 43610203  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||  || |||||||||||||||  |||||||||||||||||||    
T  43610202 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 43610158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 26170370 - 26170497
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    |||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| | | ||||||||||| | ||||||||||| ||||    
T  26170370 cttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaat 26170469  T
Q  280 cgtggcacgattgtgggaaatcgtgaca 307  Q
    |||| |||||| ||||||||||||||||    
T  26170470 cgtgacacgatcgtgggaaatcgtgaca 26170497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 24136470 - 24136340
Alignment:
Q  181 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatc 280  Q
    |||||||||||||||||||||||||  ||||||||||||||| | ||| |||||||||| |||||| | ||||||||||||| ||||||||||| |||||    
T  24136470 ttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagtttgcagggtgccaaatc 24136371  T
Q  281 gtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||| ||||||  |||||||||||||||||||    
T  24136370 gtgacacgatcttgggaaatcgtgacacgat 24136340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 166 - 311
Target Start/End: Original strand, 29402548 - 29402693
Alignment:
Q  166 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt 265  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||  |  ||| |||||||| ||    
T  29402548 attgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagctagttt 29402647  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||  || |||||||||||||||  |||||||||||||||||||    
T  29402648 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 29402693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 9352807 - 9352951
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||| || |||||||| ||||||||||| ||||||||| ||||||||||||||| |   ||||||||||| | |||    
T  9352807 tgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgagctggtttg 9352906  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||  |||||||||||||||| || ||||||||||||||||    
T  9352907 cagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgat 9352951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 15045280 - 15045137
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    ||||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||| ||| ||||||||||||||| | | |||||||||| || |||    
T  15045280 ttgttgatattggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttg 15045182  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||  || |||||||||||||||  |||||||||||||||||||    
T  15045181 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 15045137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 15465125 - 15465001
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||||||||||| | | ||||||||||| | |||    
T  15465125 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 15465026  T
Q  267 cagggtgcaaaatcgtggcacgatt 291  Q
    |||||||| |||||||| |||||||    
T  15465025 cagggtgccaaatcgtgacacgatt 15465001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 16407641 - 16407785
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||  ||||||||||||||| | | ||||||||||| | |||    
T  16407641 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 16407740  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||  || | ||||||||||||||    
T  16407741 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgat 16407785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 175 - 323
Target Start/End: Original strand, 28807083 - 28807231
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 273  Q
    |||| |||||||||| |||||||||||||||| | ||||||| ||||||| ||  ||||||||||||| | | | |||||||||| | ||| ||||||||    
T  28807083 attggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatct-gagatgccgtgagccaagtttgcagggtg 28807181  T
Q  274 caaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgt 323  Q
    |||||||||||||||||  ||||||||||||||||||||  |||||||||    
T  28807182 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgt 28807231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 16409077 - 16409221
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| | ||| ||||||||||||||| | | || |||||||| | |||    
T  16409077 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgagctggtttg 16409176  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    || ||||| |||| ||| ||||||  || | ||||||||||||||    
T  16409177 caaggtgccaaattgtgacacgatcttgaggaatcgtgacacgat 16409221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 36931856 - 36931967
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| | ||| |||||| |||||||| | | || |||||||| | ||||||||||| ||||    
T  36931856 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtgatgtcgtgagctggtttgcagggtgccaaat 36931955  T
Q  280 cgtggcacgatt 291  Q
    |||| |||||||    
T  36931956 cgtgacacgatt 36931967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 31180787 - 31180706
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||  |||| |||||||||| |||||||  || |||||||||||||||  |||||||||||||||||||    
T  31180787 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 31180706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 31180830 - 31180774
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  31180830 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 31180774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 43592854 - 43592798
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  43592854 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 43592798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 43592811 - 43592729
Alignment:
Q  230 atcgtgacacgatttcg-gggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||  ||| |||||||||||| |||||||  || |||||||||||||||  |||||||||||||||||||    
T  43592811 atcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 43592729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 167 - 322
Target Start/End: Original strand, 37556124 - 37556279
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggt-atcgtgacacgatttcggggtgccgtgag-ctaggt 264  Q
    |||||||  ||| ||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||||||||| | | | ||||||||| | || |    
T  37556124 ttgttgaatttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatt-tggtaatcgtgacacgatct-gagatgccgtgagccaagtt 37556221  T
Q  265 tgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |  | || |  |||||||||||||||  |||||||| |||||||||||  ||||||||    
T  37556222 ttgatggaggcaaatcgtggcacgatcttgggaaattgtgacacgatctagaaacttg 37556279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 322
Target Start/End: Original strand, 37560959 - 37561101
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggt-atcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtgcaaa 277  Q
    ||||||||||||||||||||||||||| | ||||||||||||||| || | ||||||||||||| | | | ||||||||| | || ||  | || |  ||    
T  37560959 cttcaaatttgtggtctggaagaacagagtaatcgtgacacgatt-tgataatcgtgacacgatct-gagatgccgtgagccaagttttgatggaggcaa 37561056  T
Q  278 atcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||||  ||||||||||||||||||||  ||||||||    
T  37561057 atcgtggcacgatcttgggaaatcgtgacacgatccagaaacttg 37561101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 2785955 - 2785819
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 272  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||  |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  2785955 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 2785858  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  2785857 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 2785819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 33768764 - 33768628
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 272  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||  |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  33768764 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 33768667  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  33768666 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 33768628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 33791896 - 33791760
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 272  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||  |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  33791896 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 33791799  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  33791798 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 33791760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 14520846 - 14520797
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  14520846 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 14520797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 35388246 - 35388196
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtga 217  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  35388246 tgttgagatttgacttcaaatttgtggtctggaagaacagagaaatcgtga 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 43625648 - 43625605
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaa 211  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||    
T  43625648 tgttgatattggcttcaaatttgtggtctggaagaacagagaaa 43625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 12083658 - 12083707
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||| |||||| |||| ||||||||||| |||||||||||||||||    
T  12083658 attggctttaaatttatggtttggaagaacagagaaatcgtgacacgatt 12083707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 38219947 - 38219886
Alignment:
Q  250 tgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||| | ||| ||||||| |||||||| ||||||  |||||||| ||||||||||    
T  38219947 tgccgtgagctggtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgat 38219886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 11916457 - 11916497
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacac 220  Q
    ||||||||||||||| || |||||||| |||||||||||||    
T  11916457 cttcaaatttgtggtttgaaagaacagagaaatcgtgacac 11916497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 1e-75; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 167 - 322
Target Start/End: Original strand, 6716084 - 6716239
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6716084 ttgttgagattgtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 6716183  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6716184 cagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttg 6716239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 54634710 - 54634864
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||||    
T  54634710 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagctaagttgc 54634809  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54634810 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 54634864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 167 - 322
Target Start/End: Original strand, 25637012 - 25637167
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggtt 265  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| || |||||| ||||    
T  25637012 ttgttgagattgtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcgaggtg-cgagagctagggtt 25637110  T
Q  266 gca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25637111 gcaggggtgc-aaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 25637167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 3617034 - 3617188
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||| |||||    
T  3617034 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggttg 3617132  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| |||||||  || ||||||||||||||||||||||||||    
T  3617133 caggggtgc-aaatcgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttg 3617188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 167 - 311
Target Start/End: Original strand, 40372255 - 40372399
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||    
T  40372255 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttg 40372354  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||  || |||||||||||||||  |||||||||||||||||||    
T  40372355 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 40372399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 168 - 322
Target Start/End: Complemental strand, 8478002 - 8477848
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||    
T  8478002 tgttgacattggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 8477903  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
     || ||| |||||||||||||||  ||||||||||||||||||| | ||||||||    
T  8477902 tggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattgagaaacttg 8477848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 800685 - 800829
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| | ||||||||||| | |||    
T  800685 tgttgagatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 800784  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    | |||||| |||||||| |||||||||||||||||||||||||||    
T  800785 cggggtgccaaatcgtgacacgattgtgggaaatcgtgacacgat 800829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 22172662 - 22172805
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| |||||||||||| || ||||    
T  22172662 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgc 22172761  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  22172762 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 22172805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 230 - 322
Target Start/End: Original strand, 6718331 - 6718423
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6718331 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttg 6718423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 168 - 322
Target Start/End: Complemental strand, 4599107 - 4598952
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| || |||||||||||| |||||    
T  4599107 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttc-ggatgccgtgagctagggttg 4599009  T
Q  267 ca-gggtgcaaaatcgtggcacga-ttgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||||||||| || ||||||||||||||||||||  ||||||||    
T  4599008 caggggtgc-aaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttg 4598952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 168 - 322
Target Start/End: Complemental strand, 4601328 - 4601173
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| || |||||||||||| |||||    
T  4601328 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttc-ggatgccgtgagctagggttg 4601230  T
Q  267 ca-gggtgcaaaatcgtggcacga-ttgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||||||||| || ||||||||||||||||||||  ||||||||    
T  4601229 caggggtgc-aaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttg 4601173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 166 - 311
Target Start/End: Complemental strand, 7167884 - 7167739
Alignment:
Q  166 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt 265  Q
    |||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||||||| |||||  ||||||||||||||| ||    
T  7167884 attgttgatattggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagctagttt 7167785  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||  || |||||||||||||||  |||||||||||||||||||    
T  7167784 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 7167739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 10208778 - 10208933
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||| ||||||| || ||||||||| || |||||    
T  10208778 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10208876  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||||||||||| |||| ||||||||||||||||  ||||||||    
T  10208877 caggggtgc-aaatcgtggcacgattttgggaaaatcgtgacacgatcaagaaacttg 10208933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 28501148 - 28501295
Alignment:
Q  164 aaattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctagg 263  Q
    |||||||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||| ||| ||||||||||||||||  || ||||||||||||     
T  28501148 aaattgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt 28501247  T
Q  264 ttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||   | |||||||||||||||  ||| |||||||||||||||    
T  28501248 ttgcaggacaccaaatcgtggcacgatcttggaaaatcgtgacacgat 28501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 10055805 - 10055960
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| || |||||    
T  10055805 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10055903  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  10055904 caggggtgc-aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttg 10055960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 10058027 - 10058182
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| || |||||    
T  10058027 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10058125  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  10058126 caggggtgc-aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttg 10058182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 10060249 - 10060404
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| || |||||    
T  10060249 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10060347  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  10060348 caggggtgc-aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttg 10060404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 10062471 - 10062626
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| || |||||    
T  10062471 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10062569  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  10062570 caggggtgc-aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttg 10062626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 10064693 - 10064848
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| || |||||    
T  10064693 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10064791  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  10064792 caggggtgc-aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttg 10064848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 10066915 - 10067070
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| || |||||    
T  10066915 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 10067013  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  10067014 caggggtgc-aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttg 10067070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 1306604 - 1306460
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | |||||||||| |||||||||||||||| |||||||||||| || | ||| ||||||||||||||||| |||| |||||||| | |||    
T  1306604 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgagctggtttg 1306505  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||    
T  1306504 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgat 1306460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 18657033 - 18656885
Alignment:
Q  164 aaattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtg-agctag 262  Q
    |||||||||| |||| |||||||||||||||||| |||||||| |||||| |||||||||| ||| ||||||||||||||||| ||||||||| ||| ||    
T  18657033 aaattgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaag 18656934  T
Q  263 gttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
     |||||||  || |||||||| ||||||  |||||||||||||||||||    
T  18656933 tttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgat 18656885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 308
Target Start/End: Original strand, 28503319 - 28503459
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||| ||| ||||||||||||||||  || |||||||||||| ||||    
T  28503319 tgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 28503418  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacac 308  Q
     ||  || |||||||||||||||  ||||||||||||||||    
T  28503419 tggacgccaaatcgtggcacgatcttgggaaatcgtgacac 28503459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 37408036 - 37408179
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||||||| |  |||||||||||| | |||    
T  37408036 tgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagctggtttg 37408135  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||  |||||||||||||||||| | |||||||||||||||    
T  37408136 cagggtgtcaaatcgtggcacgattgt-gtaaatcgtgacacgat 37408179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 166 - 322
Target Start/End: Original strand, 45282583 - 45282720
Alignment:
Q  166 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||                   ||||||||||||||||||||||||||||||||    
T  45282583 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcg-------------------tgacacgatttcggggtgccgtgagctaggtt 45282663  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||| ||||| |||||||  || ||||||||||||||||||||||||||    
T  45282664 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttg 45282720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 10210978 - 10211133
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||  || ||||||||| || |||||    
T  10210978 tgttgagattgtctttaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgattt-aggatgccgtgagttagggttg 10211076  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||||||||||| |||| ||||| ||||||||||  ||||||||    
T  10211077 caggggtgc-aaatcgtggcacgattttgggaaaatcatgacacgatcaagaaacttg 10211133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 37726300 - 37726155
Alignment:
Q  167 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt 265  Q
    ||||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||| | || |||||||||||||||| | | ||||||||||| | ||    
T  37726300 ttgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgagctggttt 37726201  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||  |||||||| ||||||| || | ||||||||||||||    
T  37726200 gcagggtgtcaaatcgtgacacgattttgtggaatcgtgacacgat 37726155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 7782712 - 7782588
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||| | ||| ||||||| | |||    
T  7782712 tgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagctggtttg 7782613  T
Q  267 cagggtgcaaaatcgtggcacgatt 291  Q
    |||||||| |||||||| |||||||    
T  7782612 cagggtgccaaatcgtgacacgatt 7782588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 23198530 - 23198386
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||  ||||||||||||||| | | ||||||||||| | |||    
T  23198530 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 23198431  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| |||||||  | | ||||||||||||||    
T  23198430 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgat 23198386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 23200729 - 23200585
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||| | | ||| ||||||| | |||    
T  23200729 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagctggtttg 23200630  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| |||||||  | | ||||||||||||||    
T  23200629 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgat 23200585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 33386137 - 33386281
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | |||||||||||||||| | |||||||| ||||||||||||||| | ||| ||||||||||||||| | | ||||||||||| | |||    
T  33386137 tgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 33386236  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||| || | ||||||||||||||    
T  33386237 cagggtgccaaatcgtgacacgattttgtggaatcgtgacacgat 33386281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 165 - 311
Target Start/End: Original strand, 26928077 - 26928224
Alignment:
Q  165 aattgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctagg 263  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||| |   ||||||||||| |     
T  26928077 aattgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggt 26928176  T
Q  264 ttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||| |||||||| ||| ||  || | ||||||||||||||    
T  26928177 ttgcagggtgccaaatcgtgacacaatcttgtggaatcgtgacacgat 26928224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 167 - 311
Target Start/End: Original strand, 27352080 - 27352224
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    ||||||| |||  ||| ||||||||||||| |||||||||  |||||||||||||||| ||| ||||||||||||||||  ||||||||||||| | |||    
T  27352080 ttgttgatattagctttaaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcttgtttg 27352179  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||    | |||||||||||||||  |||||||||||||||||||    
T  27352180 cagaacaccaaatcgtggcacgatcttgggaaatcgtgacacgat 27352224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 27453581 - 27453437
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | |||||||||||||||||| |||| ||| ||||| ||||||||| | ||| ||||||||||||||| | | ||||||||||| | |||    
T  27453581 tgttgagatttggcttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 27453482  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
     ||||||| |||||||| || ||||||| | ||||||||||||||    
T  27453481 tagggtgccaaatcgtgacatgattgtgtggaatcgtgacacgat 27453437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 311
Target Start/End: Original strand, 2671111 - 2671208
Alignment:
Q  214 gtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||| ||| ||||||||| ||||||  ||||||||||||||| ||||||| ||| |||||||||||||||  |||||||||||||||||||    
T  2671111 gtgacacgattttggcatcgtgacatgatttcaaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgat 2671208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 6718288 - 6718344
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6718288 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 6718344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 8738585 - 8738666
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||| ||||||  ||||||||||||||| |||||||  || |||||||||||||||  |||||||||||||||||||    
T  8738585 atcgtgacatgatttcaaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgat 8738666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 9090823 - 9090904
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||| ||||||  ||||||||||||||| |||||||  || |||||||||||||||  |||||||||||||||||||    
T  9090823 atcgtgacatgatttcaaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgat 9090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 27986001 - 27986082
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||| | | ||||||||||| | ||||||||||| |||||||| |||||||||| | ||||||||||||||    
T  27986001 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgtggaatcgtgacacgat 27986082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 2672431 - 2672562
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcagggtgcaaa 277  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||| ||  ||||||||||||  |||| | ||||| ||| | || |||| ||  |||||    
T  2672431 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacga--tcggagatgccgggagccaagtttgctggaagcaaa 2672528  T
Q  278 atcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||| ||||||  |||||||||||||||||||    
T  2672529 atcgtgccacgatcttgggaaatcgtgacacgat 2672562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 32143884 - 32143803
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||| | | ||||||||||||| ||||||||||| |||||||| ||||||  || | ||||||||||||||    
T  32143884 atcgtgacacgattttgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgat 32143803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 8738542 - 8738598
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||    
T  8738542 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgatt 8738598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 9090780 - 9090836
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||    
T  9090780 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgatt 9090836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 40734084 - 40734131
Alignment:
Q  177 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  40734084 tgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 40734131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 2676587 - 2676649
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgat 242  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||| ||  |||||||||||||    
T  2676587 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgat 2676649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 16264946 - 16264897
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  16264946 attggcttcaaatttgtggtttggaagaacagcgaaatcgtgacacgatt 16264897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 21711818 - 21711769
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  21711818 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 21711769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 30709266 - 30709315
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  30709266 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 30709315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 32143928 - 32143871
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||||||| | |||||||||||||||||| |||||||| |||||||||||||||||    
T  32143928 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgatt 32143871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 36029709 - 36029660
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  36029709 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 36029660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 27027318 - 27027274
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||    
T  27027318 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 27027274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 27974446 - 27974490
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||    
T  27974446 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 27974490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 8512820 - 8512684
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 273  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||| ||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  8512820 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 8512722  T
Q  274 caaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||||||||||||  |||||||||||||||||||    
T  8512721 caaaatcgtggcacgatcttgggaaatcgtgacacgat 8512684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 27974477 - 27974554
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgaca 307  Q
    ||||||||||||||| |   ||||||||||| | ||||||||||  |||||||||||||||||||  ||||| |||||    
T  27974477 atcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacgattgtgttaaatcttgaca 27974554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 39032025 - 39032074
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| |||||||||||| || ||||||||||| |||||||||||||||||    
T  39032025 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgatt 39032074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 1730916 - 1730959
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgac 218  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||    
T  1730916 attggcttcaaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 24968697 - 24968561
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgcc-gtgagctaggtt-gcagggt 272  Q
    |||| ||||||||| ||||| ||||||||||  | ||||||| |||||||  |  |||||||||||||  ||||| | | |||||| | ||| || ||      
T  24968697 attgacttcaaattagtggtttggaagaacaaaggaatcgtgtcacgatttggcaatcgtgacacgat--cggggaggcagtgagccaagtttgctggaa 24968600  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  24968599 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 24968561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 27985971 - 27986014
Alignment:
Q  181 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||    
T  27985971 ttcaaatttgtggtttggaataacagagaaatcgtgacacgatt 27986014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 40735015 - 40735062
Alignment:
Q  177 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||||||||||||||| |||| ||||||  ||||||||||||||||    
T  40735015 tgtcttcaaatttgtggtttggatgaacagataaatcgtgacacgatt 40735062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 40845285 - 40845222
Alignment:
Q  162 ataaattgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    ||||| |||||||||| |||||||||||| || | ||| ||||||| |||||||||||||||||    
T  40845285 ataaagtgttgagatttgtcttcaaatttatgttttgggagaacagagaaatcgtgacacgatt 40845222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 311
Target Start/End: Complemental strand, 8517602 - 8517564
Alignment:
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  8517602 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 8517564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 27038658 - 27038609
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| |||||| |||||||| ||||| ||||| |||||||||||||||||    
T  27038658 attggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgatt 27038609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 32476066 - 32475997
Alignment:
Q  173 agattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgat 242  Q
    |||||| ||||||||||||||| ||| ||||||| | ||||||| |||||||  |  |||||||||||||    
T  32476066 agattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32475997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 32480924 - 32480855
Alignment:
Q  173 agattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgat 242  Q
    |||||| ||||||||||||||| ||| ||||||| | ||||||| |||||||  |  |||||||||||||    
T  32480924 agattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32480855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 35926106 - 35926058
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||| ||| ||||||||||| |||||||||||||||||    
T  35926106 attggcttcaaatttg-ggtttggaagaacagagaaatcgtgacacgatt 35926058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 40592252 - 40592301
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||| ||||    
T  40592252 attggcttcaaatttgtggtttggaagaacggagaaatcgtgacatgatt 40592301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 48438832 - 48438783
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||| ||||||||||| || |||||||| |||||||||||||||||    
T  48438832 attggctttaaatttgtggtttgtaagaacagagaaatcgtgacacgatt 48438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 16498637 - 16498693
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| ||||    
T  16498637 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgatt 16498693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 3e-73; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 167 - 322
Target Start/End: Complemental strand, 16579102 - 16578947
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16579102 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 16579003  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  16579002 cagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttg 16578947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 167 - 322
Target Start/End: Original strand, 16616278 - 16616433
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16616278 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 16616377  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  16616378 cagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttg 16616433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 176 - 322
Target Start/End: Original strand, 27647476 - 27647622
Alignment:
Q  176 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgca 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27647476 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgca 27647575  T
Q  276 aaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  27647576 aaatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttg 27647622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 16554454 - 16554608
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |    
T  16554454 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggttac 16554553  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||| |||||||||||  || ||||||||||||||||||||||||||    
T  16554554 agggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttg 16554608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 16631010 - 16631164
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |    
T  16631010 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggttac 16631109  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||| |||||||||||  || ||||||||||||||||||||||||||    
T  16631110 agggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttg 16631164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 165 - 322
Target Start/End: Complemental strand, 6136550 - 6136393
Alignment:
Q  165 aattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-gg 263  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| || |||||||||||| ||    
T  6136550 aattgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttc-ggatgccgtgagctaggg 6136452  T
Q  264 ttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||   ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  6136451 ttgcaggggtgaaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttg 6136393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 166 - 311
Target Start/End: Original strand, 30125016 - 30125161
Alignment:
Q  166 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt 265  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||    
T  30125016 attgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagttt 30125115  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||  || |||||||||||||||| |||||||||||||||||||    
T  30125116 gcaggacgccaaatcgtggcacgattttgggaaatcgtgacacgat 30125161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 166 - 311
Target Start/End: Original strand, 411683 - 411829
Alignment:
Q  166 attgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggt 264  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| | ||| || ||||||| |||||| |||||||||||||||      
T  411683 attgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagctagtc 411782  T
Q  265 tgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||    
T  411783 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgat 411829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 25420797 - 25420951
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||||||||||| || |||||||||||| |||||    
T  25420797 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttc-ggatgccgtgagctagggttg 25420895  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| ||||||||||||||||  || ||||||||||||||||||||||||||    
T  25420896 caggggtgc-aaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttg 25420951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 3073343 - 3073199
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||| | ||| ||||||||||||||||| | ||||||||||| |  |     
T  3073343 tgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtcta 3073244  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||    
T  3073243 cagggtgccaaatcgtgacacgattgttggaaatcgtgacacgat 3073199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 11857567 - 11857424
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  |  |||||||||||| ||||    
T  11857567 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgc 11857468  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  11857467 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 11857424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 322
Target Start/End: Complemental strand, 2172090 - 2171949
Alignment:
Q  181 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatc 280  Q
    |||||||||||||||||||||||||| ||||||| |||| || | ||| ||||||||||||||||| | ||||||||||| | ||||||||||| |||||    
T  2172090 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaatc 2171991  T
Q  281 gtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||| ||||||  ||||||||||||||||||| || |||||||    
T  2171990 gtgacacgatcttgggaaatcgtgacacgattgtaaaacttg 2171949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 322
Target Start/End: Complemental strand, 33342688 - 33342533
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| |||| ||| ||||||| || |||||||||||| |||||    
T  33342688 tgttgagattgtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttc-ggatgccgtgagctagggttg 33342590  T
Q  267 ca-gggtgcaaaatcgtggcacga-ttgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||||||||| || ||||||||||||||||||||  ||||||||    
T  33342589 caggggtgc-aaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttg 33342533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 34166666 - 34166821
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| || |||||    
T  34166666 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 34166764  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  34166765 caggggtgc-aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttg 34166821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 6026834 - 6026988
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || || |||||||||||||| |||| || |||||| |||||    
T  6026834 tgttgagattgtcttcaaatttgtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgatttcgaggtg-cgagagctagggttg 6026932  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| ||||||||||||||||  || ||||||||||||||||  ||||||||    
T  6026933 caggggtgc-aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttg 6026988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 14741926 - 14742069
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  |  | |||||||||| ||||    
T  14741926 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagctagtttgc 14742025  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  ||| |||||||||||||||    
T  14742026 aggacgccaaatcgtggcacgatcttggaaaatcgtgacacgat 14742069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 22010189 - 22010332
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  |  ||||| || ||| ||||    
T  22010189 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagttagtttgc 22010288  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  22010289 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 22010332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 166 - 291
Target Start/End: Complemental strand, 6097988 - 6097862
Alignment:
Q  166 attgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggt 264  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| | ||| ||||||||||||||||| | ||||||||||| | |    
T  6097988 attgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtt 6097889  T
Q  265 tgcagggtgcaaaatcgtggcacgatt 291  Q
    |||||||||| |||||||| |||||||    
T  6097888 tgcagggtgctaaatcgtgacacgatt 6097862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 166 - 322
Target Start/End: Original strand, 34164442 - 34164599
Alignment:
Q  166 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggt 264  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||| ||||||| || ||||||||| || |||    
T  34164442 attgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttc-ggatgccgtgagttagggt 34164540  T
Q  265 tgca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    |||| |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  34164541 tgcaggggtgc-aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttg 34164599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 180 - 322
Target Start/End: Original strand, 5674242 - 5674384
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||||||||||||||| |||||||||||| || | ||| ||||||||| ||||| | | ||||||||||| | ||||||||||| ||||    
T  5674242 cttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagctggtttgcagggtgccaaat 5674341  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||| ||| ||  |||||||||||||||||||  |||||||||    
T  5674342 cgtgacacaatcttgggaaatcgtgacacgattttgaaacttg 5674384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 167 - 322
Target Start/End: Original strand, 13150848 - 13151004
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggtt 265  Q
    ||||| || ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| || ||||    
T  13150848 ttgtttagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggtt 13150946  T
Q  266 gca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    ||| |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  13150947 gcaggggtgc-aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttg 13151004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 22709645 - 22709501
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||| |||||||| | ||| | ||||||||||||| | | |||| |||||| | |||    
T  22709645 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgagctggtttg 22709546  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||    
T  22709545 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgat 22709501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 6439084 - 6438940
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgag-ctaggtt 265  Q
    ||||||| |||| |||||||||| |||||||||||||||  ||||||||||||||||| ||| |||||||||||| || | ||||||||||| | || ||    
T  6439084 ttgttgaaattggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagttt 6438986  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    || || |||| ||||||||||||||  |||||||||||||||||||    
T  6438985 gctggatgcataatcgtggcacgatcttgggaaatcgtgacacgat 6438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 230 - 322
Target Start/End: Original strand, 16652759 - 16652851
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||  || |||||||||||| |||||||||||||    
T  16652759 atcgtgacacgatttcggggtgccgtgagctaggttgtagggtgcaaagtcgtggaacgatttgggaaaatcgtgacacaatcgtgaaacttg 16652851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 166 - 271
Target Start/End: Original strand, 34151826 - 34151931
Alignment:
Q  166 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggt 264  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||| ||||||| || ||||||||| || |||    
T  34151826 attgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttc-ggatgccgtgagttagggt 34151924  T
Q  265 tgcaggg 271  Q
    |||||||    
T  34151925 tgcaggg 34151931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 26253589 - 26253713
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| | ||| ||||||||| ||||| | | | ||||||| ||| | |    
T  26253589 tgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattttgtgataccgtgagatagttag 26253688  T
Q  267 cagggtgcaaaatcgtggcacgatt 291  Q
    |||||||| |||||||| |||||||    
T  26253689 cagggtgccaaatcgtgacacgatt 26253713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 5266610 - 5266529
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||| ||||||||||||||| |||||||  || |||||||||||||||  |||||||||||||||||||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 5266529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 16652716 - 16652772
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16652716 tgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgacacgatt 16652772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 23896944 - 23896813
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||| || ||||||||  |||||||||||||||| ||| ||||||||||||||| |   |  |||||| | | ||||||||||  ||||    
T  23896944 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttgcagggtgtcaaat 23896845  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||| |||||| || ||||||||||||||||    
T  23896844 cgtggtacgattttgtgaaatcgtgacacgat 23896813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 5266653 - 5266597
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  5266653 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 5266597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 14737085 - 14737141
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  14737085 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 14737141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 28155167 - 28155225
Alignment:
Q  264 ttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||||    
T  28155167 ttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttg 28155225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 311
Target Start/End: Original strand, 5756983 - 5757095
Alignment:
Q  199 aagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaa 298  Q
    ||||| || ||||| ||||||||||||||| |||||||||| |||| |   || |||||| | | ||||||||||  ||||||||| |||||| || |||    
T  5756983 aagaatagagaaattgtgacacgattgtggcatcgtgacacaattttgtaatgtcgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaa 5757082  T
Q  299 atcgtgacacgat 311  Q
    |||||||||||||    
T  5757083 atcgtgacacgat 5757095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 16839323 - 16839187
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 272  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||  |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  16839323 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 16839226  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  16839225 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 16839187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 33329940 - 33330076
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 272  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||  |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  33329940 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 33330037  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  33330038 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 33330076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 14737128 - 14737209
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||  |  |||||||||||| |||||||  || |||||||||||||||  ||| |||||||||||||||    
T  14737128 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgat 14737209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 28155097 - 28155145
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgat 223  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  28155097 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgat 28155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 33335437 - 33335573
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 272  Q
    |||| ||||||||||||||| ||||||||||| | ||||||  | |||||  |  |||||||||||||  ||| | |||||||||| | ||| || ||      
T  33335437 attggcttcaaatttgtggtttggaagaacagaggaatcgtttcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaa 33335534  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  33335535 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 33335573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 5016976 - 5017025
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| |||||||||||  ||||||||||||||||    
T  5016976 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgatt 5017025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 31085953 - 31086002
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| | ||||||||| |||||||||||||||||    
T  31085953 attggcttcaaatttgtggtttagaagaacagagaaatcgtgacacgatt 31086002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 5344057 - 5343990
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggt-atcgtgacacgat 242  Q
    |||| ||||||||||||||| ||| ||||||| ||||||||| ||||||| |||| |||||||||||||    
T  5344057 attggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatt-tggtcatcgtgacacgat 5343990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 6005999 - 6005863
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 272  Q
    |||| ||||||||||||||| ||||| ||||| | ||||||| | |||||  |  |||||||||||||  ||| | |||| ||||| | ||| || ||      
T  6005999 attggcttcaaatttgtggtttggaaaaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccatgagccaagtttgctggaa 6005902  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  6005901 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 6005863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 21272469 - 21272514
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 220  Q
    |||| ||||||||||||| | |||| ||||||||||||||||||||    
T  21272469 attggcttcaaatttgtgttttggaggaacagggaaatcgtgacac 21272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 5571757 - 5571805
Alignment:
Q  176 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    ||||||||||||||||| | ||| |||| || |||||||||||||||||    
T  5571757 ttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacgatt 5571805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 3e-70; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 20343500 - 20343654
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20343500 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgc 20343599  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
     || |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20343600 cggatgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttg 20343654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 24789426 - 24789581
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||| |||    
T  24789426 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtttg 24789525  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||    
T  24789526 cagggtgccaaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttg 24789581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 167 - 322
Target Start/End: Complemental strand, 32060889 - 32060734
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggtt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||| ||||    
T  32060889 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggtt 32060791  T
Q  266 gca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||| |||||| ||||||||||||||||  || ||||||||||||||||  ||||||||    
T  32060790 gcaggggtgc-aaatcgtggcacgatttgggaaaatcgtgacacgatcaagaaacttg 32060734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 322
Target Start/End: Complemental strand, 18392780 - 18392626
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||| || | |||||||||||||| |||||    
T  18392780 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttg 18392682  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||| ||||| |||||||  || ||||||||||||||||||||||||||    
T  18392681 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttg 18392626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 168 - 322
Target Start/End: Complemental strand, 6592921 - 6592767
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||||||||| |||||    
T  6592921 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 6592823  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| ||||||||||||||||  || ||||||||||||||||  ||||||||    
T  6592822 caggggtgc-aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttg 6592767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 21640423 - 21640280
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||    
T  21640423 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 21640324  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||| ||||||  |||||||||||||||||||    
T  21640323 aggacgccaaatcgtgacacgatcttgggaaatcgtgacacgat 21640280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 43504708 - 43504577
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| | ||||||||||| | ||||||||||| ||||    
T  43504708 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaat 43504609  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||| |||||| ||||||||||||||||||||    
T  43504608 cgtgacacgatcgtgggaaatcgtgacacgat 43504577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 167 - 322
Target Start/End: Complemental strand, 6595138 - 6594983
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggtt 265  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| || |||||||||||| ||||    
T  6595138 ttgttgagattgtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggtt 6595040  T
Q  266 gca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||| |||||| ||||||||||||||||  || ||||||||||||||||  ||||||||    
T  6595039 gcaggggtgc-aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttg 6594983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 2058604 - 2058462
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||| ||||    
T  2058604 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt-gaggtgccgtgagctagtttgc 2058506  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  2058505 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 2058462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 307
Target Start/End: Original strand, 20357028 - 20357167
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||| ||||    
T  20357028 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 20357127  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgaca 307  Q
    |||  || |||||||||||||||  |||||||||||||||    
T  20357128 aggacgccaaatcgtggcacgatcttgggaaatcgtgaca 20357167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 12406858 - 12406714
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  |  |||||||||||| |||    
T  12406858 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttg 12406759  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    || |  || |||||||||||||||  |||||||||||||||||||    
T  12406758 caagacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 12406714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 1562589 - 1562509
Alignment:
Q  166 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcg 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1562589 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg 1562509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 167 - 311
Target Start/End: Original strand, 48408397 - 48408542
Alignment:
Q  167 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt 265  Q
    ||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| | ||| ||||||||||||||| | | ||||||||||| | ||    
T  48408397 ttgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 48408496  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||| |||||||| ||||||  || ||||||||||||||||    
T  48408497 gcagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgat 48408542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 308
Target Start/End: Complemental strand, 4873721 - 4873581
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  |  ||||| || ||| ||||    
T  4873721 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagatagtttgc 4873622  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacac 308  Q
    |||  || |||||||||||||||  ||||||||||||||||    
T  4873621 aggacgccaaatcgtggcacgatcttgggaaatcgtgacac 4873581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 39730933 - 39731077
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||| | | ||||||||||| | |||    
T  39730933 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 39731032  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||  || | ||||||||||||||    
T  39731033 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgat 39731077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 21646630 - 21646499
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||| ||||||||||| ||||||||||||| | | ||| ||||||||||||||||| | ||||||||||| | ||||||||||| ||||    
T  21646630 cttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaat 21646531  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||| ||||||  ||| |||||||||||||||    
T  21646530 cgtgacacgatcttggaaaatcgtgacacgat 21646499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 24023831 - 24023962
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||  |  || | ||||||| |||||||  || ||||    
T  24023831 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttcaagtggcagagagctagtttgcaggacgccaaat 24023930  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||||||  |||||||||||||||||||    
T  24023931 cgtggcacgatcttgggaaatcgtgacacgat 24023962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 18409399 - 18409255
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||| ||||||||||||| |||||||| |||||| | ||| ||||||||||||||| | ||||||||||||| | |||    
T  18409399 tgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgagctggtttg 18409300  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| ||||| || ||||||  || ||||||||||||||||    
T  18409299 cagggtgccaaatcatgacacgatcttgagaaatcgtgacacgat 18409255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 18414275 - 18414131
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | |||||||||| |||||||||||||||| ||||||||||||||| | ||| |||||| |||||||| | ||||||||||||| | |||    
T  18414275 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagctggtttg 18414176  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||| || |||||||| ||||||  ||||||||||| |||||||    
T  18414175 cagggcgccaaatcgtgacacgatcttgggaaatcgtaacacgat 18414131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 322
Target Start/End: Original strand, 21811751 - 21811893
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtgcaaaa 278  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||| ||  ||||||||||||| | | | |||||||||| | ||| |||||||||||||    
T  21811751 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgatct-gagatgccgtgagcaatgtttgcagggtgcaaaa 21811849  T
Q  279 tcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||||  ||||||||||||||||||||  ||||||||    
T  21811850 tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttg 21811893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 47264254 - 47264123
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||| |||||||| || ||||||||||||||||| ||| ||||||||||||||| |   || |||||||| | ||| ||||||  ||||    
T  47264254 cttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggtttgtagggtgtcaaat 47264155  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||| ||||||||||||||||    
T  47264154 cgtggcacaattgtgtgaaatcgtgacacgat 47264123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 12397492 - 12397390
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||  |  |||||||||||| ||||    
T  12397492 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttcaagtggccgtgagctagtttgc 12397393  T
Q  268 agg 270  Q
    |||    
T  12397392 agg 12397390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 25767527 - 25767402
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    |||||||||||||||||||||       ||||||||||||| | | ||| ||||||||||||||||| | ||||||||||| | ||||||||||| ||||    
T  25767527 cttcaaatttgtggtctggaaa------gaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttgcagggtgccaaat 25767434  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||| ||||||| |||||||||||||||||||    
T  25767433 cgtgacacgattttgggaaatcgtgacacgat 25767402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 211 - 321
Target Start/End: Original strand, 1532947 - 1533057
Alignment:
Q  211 atcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacga 310  Q
    |||||||||||| | ||| ||||||||| ||||| | |||||| |||||||| ||||||||||| |||||||| ||||||  ||||||||||||||||||    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacga 1533046  T
Q  311 tcgtgaaactt 321  Q
    | |||||||||    
T  1533047 ttgtgaaactt 1533057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 31109070 - 31109214
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgcc-gtgagct-aggtt 265  Q
    |||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||| |||||||||   ||||| || |||| || ||    
T  31109070 tgttgaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttc-aagtgcctgtaagctaagttt 31109168  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||  || |||||||||||||||  |||||||||||||||||||    
T  31109169 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 31109214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 2479947 - 2479816
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||| || |||||||| ||||| ||||||||||| ||| |||||||||||||||     ||||||||||| | ||||||||||  ||||    
T  2479947 cttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattttctaatgccgtgagctggtttgcagggtgtcaaat 2479848  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||| ||||||| || |||||||| |||||||    
T  2479847 cgtgtcacgattttgtgaaatcgttacacgat 2479816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 18390562 - 18390505
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 225  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  18390562 tgttgagattgtcttcaaatttgtggtttagaagaacagggaaatcgtgccacgattg 18390505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 21983859 - 21983723
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgc 274  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||     ||||||||||||||| |   || |||||||| | ||||||||||     
T  21983859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgattttgcaatgtcgtgagctggtttgcagggtga 21983760  T
Q  275 aaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
      ||||| |||| |||| || |||| |||||||||||    
T  21983759 ccaatcgcggcatgattttgtgaaaacgtgacacgat 21983723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 164 - 244
Target Start/End: Original strand, 44847615 - 44847696
Alignment:
Q  164 aaattgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgattt 244  Q
    |||||||||| ||| | ||||||||||||||| |  |||||||| ||||||||||||||||| ||| |||||||||||||||    
T  44847615 aaattgttgaaatttggcttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 21989518 - 21989388
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||     ||||||||||||||| |   || |||||||| | |||||||| |   |||    
T  21989518 cttcaaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattttgcaatgtcgtgagctggtttgcagggcgaccaat 21989419  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||||||| || |||| |||||||||||    
T  21989418 cgtggcacgattttgtgaaa-cgtgacacgat 21989388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 1532897 - 1532939
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 222  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  1532897 cttcaaatttgtggtctggaagaacagagaaatcgtgacacga 1532939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 18389246 - 18389190
Alignment:
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||| ||||| |||||||  || ||||||||||||||||||||||||||    
T  18389246 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttg 18389190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 322
Target Start/End: Complemental strand, 1562479 - 1562433
Alignment:
Q  276 aaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||||    
T  1562479 aaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttg 1562433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 80005 - 79956
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||| | ||||||||||| |||||||||||||||||    
T  80005 attggcttcaaatttgtgatttggaagaacagagaaatcgtgacacgatt 79956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 24265684 - 24265820
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 273  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||| ||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  24265684 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 24265782  T
Q  274 caaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||||||||||||  |||||||||||||||||||    
T  24265783 caaaatcgtggcacgatcttgggaaatcgtgacacgat 24265820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 7e-68; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 3439088 - 3439241
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3439088 tgttgagattgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttgc 3439187  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  3439188 agggtgcaaaatcgtgacacgatt-tgggaaatcgtgacacgatcgtgaaacttg 3439241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 163 - 311
Target Start/End: Original strand, 4759529 - 4759677
Alignment:
Q  163 taaattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctag 262  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||    
T  4759529 taaattgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagctag 4759628  T
Q  263 gttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
     |||||||  || |||||||||||||||  |||||||||||||||||||    
T  4759629 tttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 4759677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 10683739 - 10683882
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||| ||||    
T  10683739 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 10683838  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  10683839 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 10683882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 30656282 - 30656139
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||| ||||    
T  30656282 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 30656183  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  30656182 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 30656139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 33037287 - 33037430
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||    
T  33037287 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 33037386  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||| ||||||  |||||||||||||||||||    
T  33037387 aggacgccaaatcgtgacacgatcttgggaaatcgtgacacgat 33037430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 36980014 - 36979871
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||    
T  36980014 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 36979915  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  ||| |||||||||||||||    
T  36979914 aggacgccaaatcgtggcacgatcttggaaaatcgtgacacgat 36979871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 18852627 - 18852770
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||||||  ||||||||||||||| ||||    
T  18852627 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgc 18852726  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  18852727 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 18852770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 2627318 - 2627462
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| | | ||||||||| | |||    
T  2627318 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagctggtttg 2627417  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    || ||||| |||||||| ||||||| |||||||||||||||||||    
T  2627418 catggtgccaaatcgtgacacgattttgggaaatcgtgacacgat 2627462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 6311928 - 6311792
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgc 274  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||||| ||| ||||||||||||||||  ||||||||||||||| |||||||  ||    
T  6311928 attggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgc 6311829  T
Q  275 aaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
     |||||||||||||||  |||||||||||||||||||    
T  6311828 caaatcgtggcacgatcttgggaaatcgtgacacgat 6311792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 18870021 - 18870164
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  | || |||||||||| ||||    
T  18870021 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagctagtttgc 18870120  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  18870121 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 18870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 230 - 322
Target Start/End: Original strand, 25689604 - 25689695
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25689604 atcgtgacacgatttcggg-tgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttg 25689695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 322
Target Start/End: Complemental strand, 42575909 - 42575754
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| || ||||||||| || |||||    
T  42575909 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttc-ggatgccgtgagttagggttg 42575811  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  42575810 caggggtgc-aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttg 42575754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 39784325 - 39784468
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 266  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| || | ||||||||||| | || |||    
T  39784325 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 39784423  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    | || |||||||||||||||||||  |||||||||||||||||||    
T  39784424 ctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgat 39784468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 1261428 - 1261558
Alignment:
Q  181 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatc 280  Q
    |||||||||||||| ||||||||||  ||||||| ||||||| | ||| ||||||||||||||||| | ||||||||||||| ||||||||||| |||||    
T  1261428 ttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatc 1261527  T
Q  281 gtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||| ||||||  |||||||||||||||||||    
T  1261528 gtgacacgatcttgggaaatcgtgacacgat 1261558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 15290143 - 15290298
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || | ||||||||||| || ||||||||| || |||||    
T  15290143 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttc-ggatgccgtgagttagggttg 15290241  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  15290242 caggggtgc-aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttg 15290298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 15470512 - 15470667
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| || | ||||||||||| || ||||||||| || |||||    
T  15470512 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttc-ggatgccgtgagttagggttg 15470610  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  15470611 caggggtgc-aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttg 15470667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 31042908 - 31043032
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | |||||||||||||||||||||||| || ||||||||||||||| | ||| ||||||||||||||||| ||||||||||||| | |||    
T  31042908 tgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctggtttg 31043007  T
Q  267 cagggtgcaaaatcgtggcacgatt 291  Q
    |||||||| |||||||| |||||||    
T  31043008 cagggtgccaaatcgtgacacgatt 31043032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 166 - 308
Target Start/End: Complemental strand, 26288519 - 26288376
Alignment:
Q  166 attgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggt 264  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||| ||||| | | ||||||||||| | |    
T  26288519 attgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtt 26288420  T
Q  265 tgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacac 308  Q
    |||||||||| |||||||| ||| ||  ||||||||||||||||    
T  26288419 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacac 26288376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 166 - 308
Target Start/End: Complemental strand, 26301776 - 26301633
Alignment:
Q  166 attgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggt 264  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||| ||||| | | ||||||||||| | |    
T  26301776 attgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtt 26301677  T
Q  265 tgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacac 308  Q
    |||||||||| |||||||| ||| ||  ||||||||||||||||    
T  26301676 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacac 26301633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 166 - 308
Target Start/End: Complemental strand, 26313770 - 26313627
Alignment:
Q  166 attgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggt 264  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||| ||||| | | ||||||||||| | |    
T  26313770 attgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggtt 26313671  T
Q  265 tgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacac 308  Q
    |||||||||| |||||||| ||| ||  ||||||||||||||||    
T  26313670 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacac 26313627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 7289427 - 7289571
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttc-ggggtgccgtgagctaggttg 266  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||  ||| ||| |||||||| |||    
T  7289427 tgttgatattgacttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaagggagccatgagctagtttg 7289526  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||  || |||||||| ||||||  ||| |||||||||||||||    
T  7289527 caggacgccaaatcgtgacacgatcttggaaaatcgtgacacgat 7289571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 167 - 311
Target Start/End: Original strand, 25327663 - 25327807
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||| |||||||||  |  || ||||||||| |||    
T  25327663 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagctagtttg 25327762  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||  || ||||| |||||||||  |||||||||||||||||||    
T  25327763 caggacgccaaatcatggcacgatcttgggaaatcgtgacacgat 25327807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 7412939 - 7412808
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||||||  |   ||||||||||| | ||||||||||  ||||    
T  7412939 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagctggtttgcagggtgtcaaat 7412840  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||| || ||| || ||||||||||||||||    
T  7412839 cgtggtacaattttgtgaaatcgtgacacgat 7412808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 25689559 - 25689617
Alignment:
Q  166 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25689559 attgttgagattgtcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 25689617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 10688661 - 10688742
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||  ||||||||||||||| |||||||  || |||||||||||||||  |||||||||||||||||||    
T  10688661 atcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 10688742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 10688618 - 10688674
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  10688618 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 10688674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 5701959 - 5702008
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  5701959 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 5702008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 35745971 - 35745835
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggt 272  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | |||||  |  |||||||||||||  ||| | |||||||||| | ||| |  ||      
T  35745971 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgttggaa 35745874  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  35745873 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 35745835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 4456620 - 4456576
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||    
T  4456620 cttcaaatttgtggtttggaagaacaaagaaatcgtgacacgatt 4456576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 9036003 - 9036157
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9036003 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttgc 9036102  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||||| ||||| ||| ||| ||  ||||||||||||||||||||||||||    
T  9036103 agggtgcaaattcgtgtcactattttgttaaatcgtgacacgatcgtgaaacttg 9036157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 168 - 322
Target Start/End: Complemental strand, 20622821 - 20622666
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||  ||    
T  20622821 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 20622722  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  20622721 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttg 20622666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 21053540 - 21053683
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| ||||| |||||||||  |||    
T  21053540 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcagtgagctagaatgc 21053639  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    | ||||| |||||||| |||||||||||||||||||||||||||    
T  21053640 aaggtgccaaatcgtgacacgattgtgggaaatcgtgacacgat 21053683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 40281958 - 40282102
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||| | |||||||||||||||||||    
T  40281958 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagctaggttg 40282057  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||    
T  40282058 cagggtgccaaatcgtgacacgattgtggtaaatcgtgacacgat 40282102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 167 - 322
Target Start/End: Original strand, 44203217 - 44203372
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggtt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| || | |||||||||||||| ||||    
T  44203217 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 44203315  T
Q  266 gca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||| |||||| ||||||||||||||||  || ||||||||||||||||  ||||||||    
T  44203316 gcaggggtgc-aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttg 44203372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 9986785 - 9986929
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||| ||||||||||| ||||||||||||| |  ||    
T  9986785 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgagctggtctg 9986884  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||| |||| |||||||| ||||||| |||||||||||||||||||    
T  9986885 cagtgtgccaaatcgtgacacgattttgggaaatcgtgacacgat 9986929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 19360912 - 19361056
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| | ||||||||||||||||||| | | ||||||||||| | |||    
T  19360912 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 19361011  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||    
T  19361012 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgat 19361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 19365768 - 19365912
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| | ||| ||||||||||||||| | | ||||||||||| | |||    
T  19365768 tgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 19365867  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||    
T  19365868 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgat 19365912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 44023377 - 44023520
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 266  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| || | ||||||||||| | || |||    
T  44023377 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 44023475  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    | || |||||||||||||||||||  |||||||||||||||||||    
T  44023476 ctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgat 44023520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 164 - 322
Target Start/End: Complemental strand, 39446086 - 39445928
Alignment:
Q  164 aaattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgag-ctag 262  Q
    |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| | | ||||||||| | ||    
T  39446086 aaattgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccaag 39445988  T
Q  263 gttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
     |||||||  || |||||||||||||||  ||||||||| ||||||||||  ||||||||    
T  39445987 tttgcaggacgccaaatcgtggcacgatcttgggaaatcatgacacgatccagaaacttg 39445928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 24202251 - 24202375
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||| | ||||||||||| | |||    
T  24202251 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 24202350  T
Q  267 cagggtgcaaaatcgtggcacgatt 291  Q
    |||||||| |||||||| |||||||    
T  24202351 cagggtgccaaatcgtgacacgatt 24202375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 41391173 - 41391047
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| | | |||||||||| || |||||||  || ||||    
T  41391173 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaat 41391075  T
Q  280 cgtggcacgattgtgggaaatcgtgaca 307  Q
    |||||||||||  |||||||||||||||    
T  41391074 cgtggcacgatcttgggaaatcgtgaca 41391047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 165 - 311
Target Start/End: Original strand, 51764987 - 51765134
Alignment:
Q  165 aattgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctagg 263  Q
    ||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||| | ||  ||||||||||||||||| | ||||||||||| |     
T  51764987 aattgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagctggt 51765086  T
Q  264 ttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||| |||||||| ||||||  || | ||||||||||||||    
T  51765087 ttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgat 51765134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 322
Target Start/End: Original strand, 25439406 - 25439553
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggt-atcgtgacacgatttcggggtgccgtgag-ctaggttgcagggt 272  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||||||||||| | | ||||||||| | || ||||||| |    
T  25439406 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatt-tggtaatcgtgacacgattt-gagatgccgtgagccaagtttgcaggat 25439503  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||||||||||  ||||||||||||||||||||  ||||||||    
T  25439504 gcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttg 25439553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 307
Target Start/End: Original strand, 13604095 - 13604235
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||| | | || |||||||| | |||    
T  13604095 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 13604194  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgaca 307  Q
    ||| |||  |||||||| ||||||| || | ||||||||||    
T  13604195 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgaca 13604235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 323
Target Start/End: Original strand, 25444599 - 25444747
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggt-atcgtgacacgatttcggggtgccgtgag-ctaggttgcagggt 272  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||||||||||| | | ||||||||| | || ||| ||| |    
T  25444599 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatt-tggtaatcgtgacacgattt-gagatgccgtgagccaagtttgtaggat 25444696  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgt 323  Q
    ||||||||||||||||||  ||||||||||||||||||||  |||||||||    
T  25444697 gcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgt 25444747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 1054514 - 1054657
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 266  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||| |||| || | ||||||||||| | || |||    
T  1054514 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacga-ttggaggtgccgtgagccaagtttg 1054612  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||  || |||||||||||||||  |||||||||||||||||||    
T  1054613 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 1054657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 24793709 - 24793790
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||| ||||||||||||||| |||||||  || |||||||||||||||  |||||||||||||||||||    
T  24793709 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 24793790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 24793666 - 24793722
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  24793666 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 24793722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 26644381 - 26644517
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgc 274  Q
    |||| ||| ||||||||||| ||||||||||| | |||||||| |||||| ||  ||||| ||||||||| |   || | |||||| | ||||| ||||     
T  26644381 attggctttaaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattttgtaatgtcatgagctggtttgcacggtgt 26644480  T
Q  275 aaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
     |||||||||||||||| || |||| |||||||||||    
T  26644481 caaatcgtggcacgattttgtgaaaacgtgacacgat 26644517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 311
Target Start/End: Original strand, 24786905 - 24786968
Alignment:
Q  248 ggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||| |||||||  || |||||||||||||||  |||||||||||||||||||    
T  24786905 ggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 24786968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 13599017 - 13598968
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  13599017 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 13598968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 41398778 - 41398698
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||| | | |||||||||| || |||||||  || |||||||||||||||  |||||||||||||||||||    
T  41398778 atcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 41398698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 21536125 - 21536169
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||    
T  21536125 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 21536169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 41398809 - 41398765
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||||||||||||||| |||||||| |||||||||||||||||    
T  41398809 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgatt 41398765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 37070378 - 37070335
Alignment:
Q  181 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    
T  37070378 ttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 37070335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 3282318 - 3282274
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||||||||||||  ||||||||||  ||||||||||||||||    
T  3282318 cttcaaatttgtggttaggaagaacagaaaaatcgtgacacgatt 3282274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 13659897 - 13659841
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| ||||    
T  13659897 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgatt 13659841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 16124197 - 16124237
Alignment:
Q  184 aaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    ||||||||||| ||||||||||| |||||||||| ||||||    
T  16124197 aaatttgtggtttggaagaacagagaaatcgtgatacgatt 16124237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 168 - 322
Target Start/End: Complemental strand, 3185 - 3031
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||||||||| |||||    
T  3185 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 3087  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  3086 caggggtgc-aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttg 3031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 8e-52; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 167 - 312
Target Start/End: Complemental strand, 12647968 - 12647823
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggtt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||||||||| ||||    
T  12647968 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggtt 12647870  T
Q  266 gca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatc 312  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  12647869 gcaggggtgc-aaatcgtggcacgattgtgggaaatcgtgacacgatc 12647823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 9295858 - 9296005
Alignment:
Q  164 aaattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctagg 263  Q
    |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  |||||||||||||||     
T  9295858 aaattgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagt 9295957  T
Q  264 ttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||| ||| |||||||||||||||  |||||||||||||||||||    
T  9295958 ttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgat 9296005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 14292125 - 14291982
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||||| ||||    
T  14292125 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagctagtttgc 14292026  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  14292025 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 14291982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 6266274 - 6266418
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | ||  |||||||||| |||||| | ||||||||||| | |||    
T  6266274 tgttgagatttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagctggtttg 6266373  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  6266374 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgat 6266418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 167 - 311
Target Start/End: Original strand, 11098386 - 11098530
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||  ||||||||||||||| |||    
T  11098386 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagctagtttg 11098485  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||  || |||||||||||||||  |||||||||||||||||||    
T  11098486 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 11098530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 167 - 322
Target Start/End: Complemental strand, 3492378 - 3492222
Alignment:
Q  167 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt 265  Q
    ||||||||||| | |||||||||||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||||||| | | ||||||||||| | ||    
T  3492378 ttgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggttt 3492279  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||| |||||||| ||||||  |||||||||||||||||||  |||||||||    
T  3492278 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttg 3492222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 30832921 - 30833065
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||| || | ||  ||||||||||||||||| | ||||||||||| | |||    
T  30832921 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 30833020  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||    
T  30833021 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgat 30833065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 25410253 - 25410122
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||| | | ||||||||| | | ||||||||||| ||||    
T  25410253 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagatggtttgcagggtgccaaat 25410154  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||| ||||||  |||||||||||||||||||    
T  25410153 cgtgacacgatcttgggaaatcgtgacacgat 25410122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 4484924 - 4484779
Alignment:
Q  167 ttgttgagattgt-cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt 265  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||  | ||||||||||||| ||    
T  4484924 ttgttgagattttacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctagttt 4484825  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||| |||||||| ||||||  |  | ||||||||||||||    
T  4484824 gcagggtgccaaatcgtgacacgatcttaaggaatcgtgacacgat 4484779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 167 - 311
Target Start/End: Original strand, 39811476 - 39811620
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  |   |||| ||| || |||    
T  39811476 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaagtttg 39811575  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||  || |||||||||||||||  |||||||||||||||||||    
T  39811576 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 39811620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 32289148 - 32289292
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||| | | ||||||||||| | |||    
T  32289148 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 32289247  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| ||||| || ||||||  || | ||||||||||||||    
T  32289248 cagggtgccaaatcttgacacgatcttgaggaatcgtgacacgat 32289292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 166 - 291
Target Start/End: Complemental strand, 32247354 - 32247229
Alignment:
Q  166 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgag-ctaggt 264  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| | | ||||||||| | || |    
T  32247354 attgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccaagtt 32247256  T
Q  265 tgcagggtgcaaaatcgtggcacgatt 291  Q
    ||| || ||||||||||||||||||||    
T  32247255 tgctggatgcaaaatcgtggcacgatt 32247229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 168 - 290
Target Start/End: Complemental strand, 40739457 - 40739334
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | |||||||||||||||||||||||||||  |||||||||||||| | ||| ||||||||||||||| |   ||||||||||| | |||    
T  40739457 tgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 40739358  T
Q  267 cagggtgcaaaatcgtggcacgat 290  Q
    |||||||| |||||||| ||||||    
T  40739357 cagggtgccaaatcgtgacacgat 40739334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 44310471 - 44310548
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttc 245  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||    
T  44310471 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 44310548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 8389631 - 8389680
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  8389631 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 8389680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 311
Target Start/End: Original strand, 28258713 - 28258794
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||| |   ||||||||||| | ||||||||||  |||||||||||| ||| || ||||||||||||||||    
T  28258713 atcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgat 28258794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 10706733 - 10706782
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| |||||||||||| || ||||||||||| |||||||||||||||||    
T  10706733 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgatt 10706782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 19349854 - 19349724
Alignment:
Q  181 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcgggg-tgccgtgagctaggtt-gcagggtgcaaaa 278  Q
    |||||||||||||| ||||||||||| | ||||||| | | |||  |  |||||||||||||  ||| | |||||||||| | ||| || ||  ||||||    
T  19349854 ttcaaatttgtggtttggaagaacagaggaatcgtgtcgcaatttggcaatcgtgacacgat--cggagatgccgtgagccaagtttgctggaagcaaaa 19349757  T
Q  279 tcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||  |||||||||||||||||||    
T  19349756 tcgtggcacgatcttgggaaatcgtgacacgat 19349724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 21630561 - 21630512
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| |||||||||||| || ||||||||||| |||||||||||||||||    
T  21630561 attggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgatt 21630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 33528105 - 33528150
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 220  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||    
T  33528105 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacac 33528150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 36757425 - 36757474
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| |||||||||||  ||||||||||||||||    
T  36757425 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgatt 36757474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 39483493 - 39483444
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| ||||| |||||||||||    
T  39483493 attggcttcaaatttgtggtttggaagaacagagaaattgtgacacgatt 39483444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 20522838 - 20522794
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 219  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||    
T  20522838 attggcttcaaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 28258682 - 28258726
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||    
T  28258682 cttcaaatttgtggtttggaaaaacagagaaatcgtgacacgatt 28258726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 23077952 - 23078001
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||| || |||| ||||||||||| |||||||||||||||||    
T  23077952 attggcttcaaaattttggtttggaagaacagagaaatcgtgacacgatt 23078001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 5e-50; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 31495902 - 31495758
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| | ||||||||||| | |||    
T  31495902 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 31495803  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  31495802 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgat 31495758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 7122267 - 7122421
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||||||||| |||||    
T  7122267 tgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 7122365  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  7122366 caggggtgc-aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttg 7122421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 7124489 - 7124643
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||||||||| |||||    
T  7124489 tgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttc-ggatgccgtgagctagggttg 7124587  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  7124588 caggggtgc-aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttg 7124643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 8392982 - 8393136
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||| |||||    
T  8392982 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggttg 8393080  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| ||||||||||||||||  || ||||||||||||||||  ||||||||    
T  8393081 caggggtgc-aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttg 8393136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 24742577 - 24742434
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||    
T  24742577 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgc 24742478  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  24742477 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 24742434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 8395191 - 8395345
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||| |||||    
T  8395191 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttc-ggatgccgtgagctagggttg 8395289  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| ||||||| ||||||||  || |||||||||||| |||  ||||||||    
T  8395290 caggggtgc-aaatcgtagcacgatttgggaaaatcgtgacacaatccagaaacttg 8395345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 13992879 - 13992735
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||| | || |||||||| | |||    
T  13992879 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagctggtttg 13992780  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||    
T  13992779 cagggtgccaaatcgtgacacgattttgggaaatcgtgacacgat 13992735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 9223899 - 9224042
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  |  |||||||||||| ||||    
T  9223899 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgc 9223998  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  9223999 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 9224042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 51521050 - 51520907
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  || |||||||||||| ||||    
T  51521050 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgc 51520951  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  ||||||||| |||||||||    
T  51520950 aggacgccaaatcgtggcacgatcttgggaaatcatgacacgat 51520907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 56141511 - 56141655
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| | || | |||||||||| ||||    
T  56141511 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagctagtttgc 56141610  T
Q  268 agggtg-caaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  | |||||||||||||||||  |||||||||||||||||||    
T  56141611 aggacgccaaaatcgtggcacgatcttgggaaatcgtgacacgat 56141655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 9228686 - 9228829
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  |  |||||||||| | ||||    
T  9228686 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctcgtttgc 9228785  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||  || |||||||||||||||  |||||||||||||||||||    
T  9228786 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 9228829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 167 - 322
Target Start/End: Original strand, 5135648 - 5135804
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggtt 265  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| || ||||    
T  5135648 ttgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggtt 5135746  T
Q  266 gca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    ||| |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  5135747 gcaggggtgc-aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttg 5135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 5137875 - 5138030
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| || |||||    
T  5137875 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttc-ggatgccgtgagttagggttg 5137973  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtggg-aaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||| ||||||| |||| ||||||||||||||||  ||||||||    
T  5137974 caggggtgc-aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttg 5138030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 5733251 - 5733103
Alignment:
Q  164 aaattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtg-agctag 262  Q
    |||||||||| |||| |||||||||||||||||| |||||||| |||||| |||||||||| ||| ||||||||||||||||| ||||||||| ||| ||    
T  5733251 aaattgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaag 5733152  T
Q  263 gttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
     |||||||  || |||||||| ||||||  |||||||||||||||||||    
T  5733151 tttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgat 5733103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 18856309 - 18856166
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgag-ctaggttg 266  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| || | ||||||||||| | || |||    
T  18856309 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttg 18856211  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    | || ||||||||||||||| |||  |||||||||||||||||||    
T  18856210 ctggatgcaaaatcgtggcaagatcttgggaaatcgtgacacgat 18856166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 28467977 - 28468121
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||| ||||||||||| ||||||||||||||| | ||| ||||| ||||||||| | | ||||||||||| | |||    
T  28467977 tgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgagctggtttg 28468076  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| ||||||  ||| |||||||||||||||    
T  28468077 cagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgat 28468121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 166 - 311
Target Start/End: Complemental strand, 3814607 - 3814463
Alignment:
Q  166 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt 265  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||  |   |||| ||| || ||    
T  3814607 attgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaagttt 3814508  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||| |  || |||||||| ||||||| |||||||||||||||||||    
T  3814507 gcaagacgccaaatcgtgtcacgatt-tgggaaatcgtgacacgat 3814463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 45347324 - 45347460
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 273  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||||| || | | ||||||||| | || |||| || ||    
T  45347324 attggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacga-ttagagatgccgtgagccaagtttgctggatg 45347422  T
Q  274 caaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||||||||||||  |||||||||||||||||||    
T  45347423 caaaatcgtggcacgatcttgggaaatcgtgacacgat 45347460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 18860522 - 18860403
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgag-ctaggtt 265  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| || | ||||||||||| | || ||    
T  18860522 ttgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagttt 18860424  T
Q  266 gcagggtgcaaaatcgtggca 286  Q
    || || |||||||||||||||    
T  18860423 gctggatgcaaaatcgtggca 18860403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 291
Target Start/End: Original strand, 31985126 - 31985251
Alignment:
Q  167 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt 265  Q
    ||||||||||| | ||||||||||||| |||| |||||||| ||||||||||||||| | ||| ||||||||||||||| | | | ||||||||||| |     
T  31985126 ttgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgataccgtgagctagtta 31985225  T
Q  266 gcagggtgcaaaatcgtggcacgatt 291  Q
    ||||||||| |||||||| |||||||    
T  31985226 gcagggtgccaaatcgtgacacgatt 31985251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 311
Target Start/End: Original strand, 18712295 - 18712398
Alignment:
Q  208 gaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgaca 307  Q
    ||||||||||||||||| ||| ||||||||||||||||  |  |||||||||||| |||||||  || |||||||||||||||  |||||||||||||||    
T  18712295 gaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgaca 18712394  T
Q  308 cgat 311  Q
    ||||    
T  18712395 cgat 18712398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 29761196 - 29761115
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||| ||||||||||||||| |||||||  || |||||||||||||||  |||||||||||||||||||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 29761115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 175 - 311
Target Start/End: Complemental strand, 5148294 - 5148158
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgc 274  Q
    |||| ||||||||||||||| |||||||| || ||||||||||||||||| |   | ||||||||||||| |   || |||||||||| ||||||||||     
T  5148294 attggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattttgcaatgtcgtgagctagtttgcagggtga 5148195  T
Q  275 aaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
      ||||||||||||||| || |||| | |||||||||    
T  5148194 ccaatcgtggcacgattttgtgaaaacttgacacgat 5148158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 29761241 - 29761183
Alignment:
Q  166 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  29761241 attgttgatatttgcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 29761183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 3778165 - 3778116
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  3778165 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 5143859 - 5143810
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  5143859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 5143810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 8689044 - 8689093
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  8689044 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 8689093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 16628353 - 16628402
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  16628353 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 16628402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 38151918 - 38151967
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  38151918 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 38151967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 5268699 - 5268748
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||| ||||    
T  5268699 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacaggatt 5268748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 6742896 - 6742945
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| |||||||||| |||| ||||||||||| |||||||||||||||||    
T  6742896 attggcttcaaatttatggtttggaagaacagagaaatcgtgacacgatt 6742945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 10047982 - 10047933
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| |||||||||||  ||||||||||||||||    
T  10047982 attggcttcaaatttgtggtttggaagaacagataaatcgtgacacgatt 10047933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 16622774 - 16622823
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||| ||||||||||| ||||||||||| |||||||||||||||||    
T  16622774 attggcttaaaatttgtggtttggaagaacagagaaatcgtgacacgatt 16622823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 311
Target Start/End: Original strand, 45356861 - 45356941
Alignment:
Q  231 tcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||||||||| | | |||||||||| | ||| || || |||||||||||||||||||  |||||||||||||||||||    
T  45356861 tcgtgacacgattt-gagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgat 45356941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 54867795 - 54867746
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| |||||||| || ||| |||||||||||||    
T  54867795 attggcttcaaatttgtggtttggaagaatagagaagtcgtgacacgatt 54867746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 36314716 - 36314760
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    ||||||||||||||| | |||||| || |||||||||||||||||    
T  36314716 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgatt 36314760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 36328925 - 36328969
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    ||||||||||||||| | |||||| || |||||||||||||||||    
T  36328925 cttcaaatttgtggtttcgaagaatagagaaatcgtgacacgatt 36328969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 322
Target Start/End: Complemental strand, 4310 - 4156
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||   |||||||||||||| |||||    
T  4310 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattt-taggtgccgtgagctagggttg 4212  T
Q  267 ca-gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    || |||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  4211 caggggtgc-aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttg 4156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 5859 - 6014
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagcta-ggttg 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||||||||| || | |||||||||||||| |||||    
T  5859 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacga-ttggaggtgccgtgagctagggttg 5957  T
Q  267 cagggtgcaaaatcgtggcacgattgtgg-gaaatcgtgacacgatcgtgaaacttg 322  Q
    ||||||||||| ||||| |||||||||||  ||||||||||||||||||||||||||    
T  5958 cagggtgcaaattcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttg 6014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 167 - 307
Target Start/End: Original strand, 17430 - 17571
Alignment:
Q  167 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt 265  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||| | ||||||||||| | ||    
T  17430 ttgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggttt 17529  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgaca 307  Q
    ||||||||| |||||||| ||||||  |||||||||||||||    
T  17530 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgaca 17571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 168 - 311
Target Start/End: Complemental strand, 9308 - 9165
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||| | ||||||||||| | |||    
T  9308 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9209  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||| |||||||| || |||| |||||||||||||||||||    
T  9208 cagggtgccaaatcgtgacatgatt-tgggaaatcgtgacacgat 9165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 166 - 311
Target Start/End: Complemental strand, 11755 - 11610
Alignment:
Q  166 attgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggt 264  Q
    |||||||||||| | ||||||| ||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||  | ||||||||||| | |    
T  11755 attgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtt 11656  T
Q  265 tgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||||    
T  11655 tgcagggtgccaaatcgtgacacgatt-tgggaaatcgtgacacgat 11610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 322
Target Start/End: Original strand, 21953 - 22094
Alignment:
Q  181 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatc 280  Q
    |||||||||||||||||||||||||| ||||||| |||| || | ||| ||||||||||||||||| ||||||||||||||| |||||||  || |||||    
T  21953 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatc 22052  T
Q  281 gtggcacgattgtgggaaatcgtgacacgatcgtgaaacttg 322  Q
    ||| ||||||  ||||||||||||||||||| || |||||||    
T  22053 gtgacacgatcttgggaaatcgtgacacgattgtaaaacttg 22094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 167 - 311
Target Start/End: Complemental strand, 946 - 802
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgag-ctaggtt 265  Q
    ||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||| || | ||||||||||| | || ||    
T  946 ttgttgaaattggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagttt 848  T
Q  266 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    || || |||||||||||||||||||  |||||||||||||||||||    
T  847 gctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgat 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 167 - 311
Target Start/End: Original strand, 3336 - 3480
Alignment:
Q  167 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    ||||||| |||| |||||||||||||||||||||||| || ||||||||||||||||| ||  ||||||||||||||||  |  |||||||||||| |||    
T  3336 ttgttgatattggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagctagtttg 3435  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
     |||  || |||||||||||||||  |||||||||||||||||||    
T  3436 aaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 3480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 69; Significance: 6e-31; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 307
Target Start/End: Original strand, 132752 - 132892
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||| | | || |||||||| | |||    
T  132752 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 132851  T
Q  267 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgaca 307  Q
    ||| |||  |||||||| ||||||| || | ||||||||||    
T  132852 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgaca 132892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 6302 - 6253
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  6302 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 6253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 3110 - 3061
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||| ||||||||||    
T  3110 attggcttcaaatttgtggtttggaagaacagagaaatcatgacacgatt 3061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 149658 - 149602
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||| ||||  ||||| |||||||||||| ||||    
T  149658 tgttgatattggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgatt 149602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 168 - 311
Target Start/End: Original strand, 34554 - 34697
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgc 267  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||  |  ||||| || | | ||||    
T  34554 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggccgttagtttgtttgc 34653  T
Q  268 agggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    | |  || |||||||||||||||  |||||||||||||||||||    
T  34654 atgacgccaaatcgtggcacgatcttgggaaatcgtgacacgat 34697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 291
Target Start/End: Original strand, 7911 - 8035
Alignment:
Q  168 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttg 266  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||||||||||||| | ||| ||||||||||||||| | | ||||||||| | | |||    
T  7911 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagttggtttg 8010  T
Q  267 cagggtgcaaaatcgtggcacgatt 291  Q
    |||||||| |||||||| |||||||    
T  8011 cagggtgccaaatcgtgacacgatt 8035  T

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Target: scaffold1519 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 311
Target Start/End: Original strand, 523 - 626
Alignment:
Q  208 gaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgaca 307  Q
    ||||||||||||||| | ||| ||||||||||||||||| | ||||||||||||| ||||||||||| |||||||| ||||||  || | ||||||||||    
T  523 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgaca 622  T
Q  308 cgat 311  Q
    ||||    
T  623 cgat 626  T

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Target: scaffold1455 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 1709 - 1784
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatt 243  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||    
T  1709 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

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Target: scaffold0087 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 43447 - 43574
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    |||||||||| |||| |||||||| || ||||||||||||||||||||| ||||||||||||||| |   || |||||||| | || |||||||  ||||    
T  43447 cttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattttgtaatgtcgtgagctggtttacagggtgtcaaat 43546  T
Q  280 cgtggcacgattgtgggaaatcgtgaca 307  Q
    ||||| |||||| || ||||||||||||    
T  43547 cgtggtacgattttgtgaaatcgtgaca 43574  T

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Target: scaffold0087; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 36332 - 36381
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||| ||||||||||||||| ||||||||||| |||||| ||| ||||||    
T  36332 attggcttcaaatttgtggtttggaagaacagagaaatcatgatacgatt 36381  T

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Target: scaffold0510 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 180 - 311
Target Start/End: Original strand, 1096 - 1227
Alignment:
Q  180 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaat 279  Q
    ||||||||||||||| || ||||||||  |||||||||||||||| ||| ||||||||||||||| |   |  |||||| | | ||||||||||  ||||    
T  1096 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttgcagggtgtcaaat 1195  T
Q  280 cgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||| |||||| || ||||||||||||||||    
T  1196 cgtggtacgattttgtgaaatcgtgacacgat 1227  T

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Target: scaffold0665 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 8273 - 8217
Alignment:
Q  168 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 224  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  8273 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 8217  T

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Target: scaffold0665; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 311
Target Start/End: Complemental strand, 8230 - 8149
Alignment:
Q  230 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||  |  |||||||||||| |||||||  || |||||||||||||||  ||| |||||||||||||||    
T  8230 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgat 8149  T

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Target: scaffold0259 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 1746 - 1882
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgcc-gtgagctaggtt-gcagggt 272  Q
    |||| ||||||||| ||||| ||||||||||| | ||||||| |||||||  |  |||||||||||||  ||||| | | |||||| | ||| || ||      
T  1746 attgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggggaggcagtgagccaagtttgctggaa 1843  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  1844 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 1882  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 148451 - 148587
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgcc-gtgagctaggtt-gcagggt 272  Q
    |||| ||||||||| ||||| ||||||||||| | ||||||| |||||||  |  |||||||||||||  ||||| | | |||||| | ||| || ||      
T  148451 attgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggggaggcagtgagccaagtttgctggaa 148548  T
Q  273 gcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  148549 gcaaaatcgtggcacgatcttgggaaatcgtgacacgat 148587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 45805 - 45751
Alignment:
Q  167 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 220  Q
    ||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||    
T  45805 ttgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacac 45751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 45726 - 45679
Alignment:
Q  264 ttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    ||||||||||  |||||||||||||||| || ||||||||||||||||    
T  45726 ttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgat 45679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 13791 - 13927
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 273  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||| ||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  13791 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 13889  T
Q  274 caaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||||||||||||  |||||||||||||||||||    
T  13890 caaaatcgtggcacgatcttgggaaatcgtgacacgat 13927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 176457 - 176593
Alignment:
Q  175 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggtatcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtg 273  Q
    |||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||| ||   ||||||||||||   || | || |||||||| ||| || ||  |    
T  176457 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggag-gcagtgagctaagtttgctggaag 176555  T
Q  274 caaaatcgtggcacgattgtgggaaatcgtgacacgat 311  Q
    |||||||||||||||||  |||||||||||||||||||    
T  176556 caaaatcgtggcacgatcttgggaaatcgtgacacgat 176593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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