View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1359_low_66 (Length: 243)
Name: NF1359_low_66
Description: NF1359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1359_low_66 |
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Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 32483215 - 32483432
Alignment:
| Q |
7 |
caacaaaatagagaaagacaaaagaaaataccatgaaatatacttttatgagtaaagtaacacctacttcttgaataatccttgaac----tcaatcaac |
102 |
Q |
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| T |
32483215 |
caacaaaatagagaaagacaaaagaaaataccatgaaatatacttttatgagtaaagtaacacctacttcttgaataatccttgaactcaatcaatcaac |
32483314 |
T |
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| Q |
103 |
aacacaaataaataccgaaaccacacttcaattatcaagaatccttgaataaaactgttactctaatttttgccttttcaaattatgatattttttcttc |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32483315 |
aacacaaataaataccgaaaccacacttcaattatcaagaatccttgaat-aaactgttactctaatttttgccttttcaaattatgatattttttcttc |
32483413 |
T |
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| Q |
203 |
atgtaaaatatgtataaac |
221 |
Q |
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||||||||||||||||||| |
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| T |
32483414 |
atgtaaaatatgtataaac |
32483432 |
T |
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