View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13601_low_2 (Length: 590)

Name: NF13601_low_2
Description: NF13601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13601_low_2
NF13601_low_2
[»] chr4 (44 HSPs)
chr4 (20-590)||(3684423-3684993)
chr4 (130-252)||(33152453-33152575)
chr4 (126-223)||(2728600-2728697)
chr4 (383-489)||(35675216-35675323)
chr4 (383-489)||(52341577-52341684)
chr4 (386-489)||(39158355-39158459)
chr4 (360-487)||(42627099-42627229)
chr4 (222-281)||(2728256-2728315)
chr4 (364-485)||(31010431-31010556)
chr4 (385-506)||(30199814-30199936)
chr4 (365-485)||(55120072-55120195)
chr4 (381-485)||(15986246-15986351)
chr4 (385-489)||(29462777-29462882)
chr4 (384-479)||(32885015-32885110)
chr4 (400-487)||(46823450-46823538)
chr4 (383-474)||(51266915-51267007)
chr4 (399-485)||(31494703-31494790)
chr4 (339-456)||(48513628-48513749)
chr4 (340-473)||(51018360-51018496)
chr4 (383-484)||(1457561-1457663)
chr4 (385-455)||(1801613-1801683)
chr4 (383-484)||(20456550-20456652)
chr4 (383-441)||(41956239-41956297)
chr4 (400-485)||(45088050-45088133)
chr4 (385-489)||(966558-966663)
chr4 (393-485)||(30475405-30475498)
chr4 (394-450)||(31754953-31755010)
chr4 (383-474)||(3769804-3769896)
chr4 (394-441)||(27839343-27839390)
chr4 (383-489)||(30617925-30618032)
chr4 (394-441)||(45688768-45688815)
chr4 (383-485)||(50514639-50514742)
chr4 (385-462)||(3472126-3472204)
chr4 (385-489)||(23260680-23260786)
chr4 (385-451)||(33803386-33803452)
chr4 (544-586)||(33977775-33977817)
chr4 (400-485)||(40436061-40436147)
chr4 (406-447)||(37771155-37771196)
chr4 (537-590)||(46886959-46887012)
chr4 (400-441)||(55669764-55669805)
chr4 (394-453)||(2940276-2940336)
chr4 (418-485)||(23690980-23691048)
chr4 (406-485)||(35808445-35808525)
chr4 (400-451)||(35927317-35927369)
[»] chr1 (30 HSPs)
chr1 (122-285)||(9388557-9388720)
chr1 (364-485)||(14331817-14331942)
chr1 (166-283)||(10366564-10366681)
chr1 (364-485)||(43168121-43168246)
chr1 (364-485)||(44359673-44359798)
chr1 (383-457)||(21268318-21268392)
chr1 (383-464)||(41898882-41898964)
chr1 (385-489)||(17402924-17403029)
chr1 (406-488)||(27160139-27160222)
chr1 (383-489)||(51424133-51424240)
chr1 (418-485)||(8892829-8892897)
chr1 (364-454)||(16691305-16691399)
chr1 (383-487)||(28850933-28851037)
chr1 (408-487)||(34644143-34644223)
chr1 (400-452)||(27210737-27210791)
chr1 (393-478)||(25177482-25177568)
chr1 (394-473)||(26469616-26469696)
chr1 (383-485)||(22346260-22346363)
chr1 (392-488)||(33657811-33657908)
chr1 (363-489)||(40920161-40920293)
chr1 (394-441)||(42607358-42607405)
chr1 (383-485)||(43433755-43433858)
chr1 (383-485)||(48938616-48938718)
chr1 (408-485)||(11385961-11386039)
chr1 (383-456)||(36596589-36596663)
chr1 (513-555)||(41151751-41151793)
chr1 (400-441)||(7190515-7190556)
chr1 (394-450)||(41147512-41147569)
chr1 (385-456)||(15444956-15445028)
chr1 (383-450)||(40845266-40845334)
[»] chr6 (26 HSPs)
chr6 (134-282)||(29396444-29396592)
chr6 (131-273)||(22995983-22996123)
chr6 (131-273)||(23792277-23792417)
chr6 (134-281)||(18141383-18141530)
chr6 (184-273)||(22956988-22957077)
chr6 (184-273)||(23831315-23831404)
chr6 (129-252)||(7045131-7045254)
chr6 (383-485)||(12226357-12226460)
chr6 (138-273)||(21203236-21203377)
chr6 (383-436)||(27127533-27127586)
chr6 (393-485)||(29964281-29964374)
chr6 (383-441)||(10855457-10855515)
chr6 (136-281)||(9961152-9961297)
chr6 (400-485)||(22414634-22414719)
chr6 (383-485)||(26539092-26539196)
chr6 (418-485)||(34780039-34780107)
chr6 (383-484)||(7274240-7274342)
chr6 (383-456)||(28014644-28014718)
chr6 (400-450)||(7875224-7875275)
chr6 (400-450)||(7880470-7880521)
chr6 (394-464)||(8324141-8324212)
chr6 (385-434)||(12775142-12775191)
chr6 (405-485)||(31490738-31490819)
chr6 (418-485)||(6507450-6507518)
chr6 (393-441)||(12175584-12175632)
chr6 (418-485)||(16437643-16437711)
[»] chr5 (28 HSPs)
chr5 (129-284)||(900883-901038)
chr5 (130-282)||(15434412-15434564)
chr5 (130-281)||(2250327-2250478)
chr5 (128-230)||(30839962-30840064)
chr5 (383-457)||(24288495-24288570)
chr5 (383-457)||(24373651-24373726)
chr5 (383-487)||(20184574-20184679)
chr5 (222-282)||(30839719-30839779)
chr5 (418-485)||(39167576-39167644)
chr5 (408-478)||(39335460-39335531)
chr5 (364-472)||(4293835-4293947)
chr5 (383-441)||(5151514-5151572)
chr5 (128-256)||(36193765-36193893)
chr5 (383-455)||(39076619-39076692)
chr5 (418-485)||(10163687-10163755)
chr5 (385-456)||(28599682-28599754)
chr5 (400-450)||(39567918-39567969)
chr5 (408-474)||(39693001-39693068)
chr5 (385-450)||(338792-338858)
chr5 (400-473)||(2970122-2970196)
chr5 (400-434)||(43414107-43414141)
chr5 (405-457)||(17605969-17606022)
chr5 (404-485)||(19531756-19531837)
chr5 (400-487)||(678428-678516)
chr5 (383-487)||(10406766-10406870)
chr5 (418-454)||(14640494-14640530)
chr5 (516-584)||(37706525-37706593)
chr5 (394-461)||(38610329-38610397)
[»] chr7 (39 HSPs)
chr7 (129-282)||(38174620-38174773)
chr7 (128-281)||(6494744-6494897)
chr7 (127-282)||(45849425-45849581)
chr7 (393-474)||(30388696-30388778)
chr7 (393-491)||(4686079-4686178)
chr7 (399-473)||(34835856-34835931)
chr7 (385-455)||(5543056-5543127)
chr7 (383-489)||(35003582-35003687)
chr7 (421-507)||(42552535-42552622)
chr7 (383-440)||(40066943-40067000)
chr7 (418-485)||(16931871-16931939)
chr7 (418-485)||(16937254-16937322)
chr7 (374-441)||(32204207-32204274)
chr7 (383-453)||(40774268-40774339)
chr7 (383-485)||(42222201-42222304)
chr7 (383-489)||(44296928-44297034)
chr7 (400-485)||(8380421-8380507)
chr7 (400-485)||(27053536-27053622)
chr7 (400-457)||(27236852-27236910)
chr7 (393-462)||(41084801-41084871)
chr7 (362-441)||(3720116-3720198)
chr7 (385-456)||(3863051-3863123)
chr7 (383-485)||(49069535-49069638)
chr7 (383-441)||(5240358-5240416)
chr7 (383-441)||(5347998-5348056)
chr7 (420-477)||(16957653-16957711)
chr7 (410-487)||(35404307-35404385)
chr7 (383-441)||(40763274-40763332)
chr7 (408-505)||(44390955-44391053)
chr7 (383-441)||(48454848-48454906)
chr7 (392-485)||(48879650-48879744)
chr7 (400-441)||(1910269-1910310)
chr7 (406-474)||(6548521-6548590)
chr7 (405-457)||(14718166-14718219)
chr7 (385-434)||(31626069-31626118)
chr7 (395-487)||(21577681-21577773)
chr7 (401-449)||(40335005-40335053)
chr7 (418-489)||(41141000-41141072)
chr7 (383-486)||(44260529-44260632)
[»] chr2 (24 HSPs)
chr2 (130-282)||(33538175-33538327)
chr2 (363-489)||(2239558-2239688)
chr2 (333-485)||(33848966-33849122)
chr2 (391-464)||(9965089-9965161)
chr2 (383-474)||(3454724-3454815)
chr2 (385-485)||(11659242-11659343)
chr2 (383-485)||(1729465-1729567)
chr2 (400-485)||(34512626-34512712)
chr2 (393-485)||(33726360-33726453)
chr2 (408-486)||(34392603-34392678)
chr2 (385-441)||(43140351-43140407)
chr2 (406-456)||(747540-747591)
chr2 (383-485)||(6999182-6999285)
chr2 (406-464)||(13997953-13998012)
chr2 (394-441)||(17603836-17603883)
chr2 (383-485)||(39401561-39401663)
chr2 (383-441)||(30831643-30831701)
chr2 (383-474)||(10900276-10900368)
chr2 (403-474)||(15004918-15004990)
chr2 (419-462)||(19851675-19851719)
chr2 (400-436)||(31167624-31167660)
chr2 (419-478)||(40798385-40798445)
chr2 (393-441)||(41436503-41436551)
chr2 (394-434)||(44173151-44173191)
[»] chr3 (27 HSPs)
chr3 (128-281)||(26847675-26847828)
chr3 (133-282)||(40034727-40034876)
chr3 (141-282)||(2043731-2043874)
chr3 (383-484)||(45899569-45899672)
chr3 (385-489)||(34060794-34060899)
chr3 (338-478)||(13647014-13647161)
chr3 (385-489)||(4542381-4542486)
chr3 (421-485)||(51256137-51256202)
chr3 (398-489)||(3304970-3305061)
chr3 (383-485)||(8847478-8847581)
chr3 (390-456)||(29213393-29213460)
chr3 (383-485)||(46317466-46317569)
chr3 (383-456)||(12060085-12060159)
chr3 (383-484)||(35306313-35306415)
chr3 (364-478)||(271176-271288)
chr3 (135-211)||(8913926-8914002)
chr3 (383-462)||(51877268-51877348)
chr3 (399-489)||(21324492-21324583)
chr3 (125-175)||(30074974-30075024)
chr3 (419-456)||(50420693-50420731)
chr3 (400-485)||(51817355-51817441)
chr3 (393-485)||(36730189-36730282)
chr3 (383-436)||(39436495-39436548)
chr3 (383-489)||(11675289-11675394)
chr3 (406-485)||(31647284-31647364)
chr3 (400-475)||(44695714-44695790)
chr3 (383-478)||(46365223-46365319)
[»] chr8 (23 HSPs)
chr8 (393-485)||(11295500-11295593)
chr8 (383-502)||(39972178-39972298)
chr8 (383-471)||(11332820-11332909)
chr8 (200-273)||(37819879-37819952)
chr8 (388-491)||(4308783-4308887)
chr8 (383-489)||(20212416-20212522)
chr8 (363-479)||(24304928-24305047)
chr8 (426-489)||(5300199-5300263)
chr8 (383-487)||(7532765-7532868)
chr8 (383-474)||(26892777-26892869)
chr8 (363-485)||(31596424-31596549)
chr8 (241-284)||(24511973-24512016)
chr8 (394-473)||(37433258-37433337)
chr8 (400-478)||(38869991-38870070)
chr8 (383-434)||(45338036-45338087)
chr8 (383-441)||(3174485-3174543)
chr8 (408-505)||(20169245-20169343)
chr8 (383-441)||(21016259-21016317)
chr8 (365-457)||(34421323-34421419)
chr8 (406-487)||(35973925-35974007)
chr8 (385-450)||(40550405-40550471)
chr8 (406-450)||(33741523-33741568)
chr8 (393-434)||(35930168-35930209)
[»] scaffold0144 (1 HSPs)
scaffold0144 (418-485)||(39569-39635)
[»] scaffold0064 (1 HSPs)
scaffold0064 (383-447)||(16593-16657)
[»] scaffold0062 (3 HSPs)
scaffold0062 (406-485)||(16820-16900)
scaffold0062 (406-485)||(26988-27068)
scaffold0062 (406-485)||(37154-37234)


Alignment Details
Target: chr4 (Bit Score: 475; Significance: 0; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 20 - 590
Target Start/End: Complemental strand, 3684993 - 3684423
Alignment:
Q  20 gatgctaggtcaagaaaccaatgtccattgagtattatttagcattctcctttatagtaaatgtttttaatttgtgtgaatcactggactataggttagt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3684993 gatgctaggtcaagaaaccaatgtccattgagtattatttagcattctcctttatcgtaaatgtttttaatttgtgtgaatcactggactataggttagt 3684894  T
Q  120 cattttaaaagagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaat 219  Q
    | |||||||||||||||||||||||||||| |||||||| | ||  ||||||||||  | ||||||||||||||||||||||||||||||||  ||||||    
T  3684893 ccttttaaaagagctatgttatatgtacatctaaaattggataatcaatgcaacaacctttaactttgtgaggagcacaaaaatcgaaatcagacaaaat 3684794  T
Q  220 attattaaaaatagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctcttttgaaatcgagggagtagtattaaattaagaaaaat 319  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  3684793 attattaaaaatagcaaatatattgttggttttacaatttagttgttcacatattattccttttttgaaatcgagggagtagtattaaattaagaaaaat 3684694  T
Q  320 gctaacaaatatcttaagaaaaatgttaaatagtgtctgtgaaacattggttaaaatgataaaagaaatattatattgagaaatgatgaaaaatgatcaa 419  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3684693 gctaacaaatatcttaagaaaaatgttaaatagtgtctttgaaatattggttaaaatgataaaagaaatattatattgagaaatgatgaaaaatgatcaa 3684594  T
Q  420 tttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttcttaacaagtacacttgttagcataatccatatcatttga 519  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  3684593 tttaactttttaaaaataaaaaattattgaattcaatataaacataatacttttggttttcttaataaatacacttgttagcataatccatatcatttga 3684494  T
Q  520 taggaaatctaataaagaaattttatcttataaattatacattcatagcattaaaactttaaaaattgact 590  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3684493 taagaaatctaataaagaaattttatcttataaattatacattcatagcattaaaactttaaaaattgact 3684423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 33152453 - 33152575
Alignment:
Q  130 gagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaa 229  Q
    |||||||||||| ||||||| |||||||| | ||| |||||||||| || ||| ||||||||||||||  ||||| |||||||||||||||| |||||||    
T  33152453 gagctatgttatttgtacatctaaaattggacaaccaatgcaacaacttttaattttgtgaggagcacggaaatcaaaatcatgcaaaatatcattaaaa 33152552  T
Q  230 atagcaaatgtgttgttggttgt 252  Q
    |||||||||  ||||||||||||    
T  33152553 atagcaaataagttgttggttgt 33152575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 2728697 - 2728600
Alignment:
Q  126 aaaagagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatatta 223  Q
    |||||||||||||||| |||||||||||||||| | ||| ||||||||||  | ||||||||||||||||||| |||||||||||| |||||||||||    
T  2728697 aaaagagctatgttatttgtacatttaaaattggacaaccaatgcaacaacctttaactttgtgaggagcacataaatcgaaatcaagcaaaatatta 2728600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 383 - 489
Target Start/End: Original strand, 35675216 - 35675323
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||| ||||| |||||  |||||| |||| ||||||||||||||||||| |||| |||||||||||||||  ||||||| |||||||| ||||||    
T  35675216 agaaatattgtattgggaaatagtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacatactacttttgattttct 35675315  T
Q  482 taacaagt 489  Q
    ||||||||    
T  35675316 taacaagt 35675323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 383 - 489
Target Start/End: Complemental strand, 52341684 - 52341577
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||||| |||  ||||||||||||||||| ||||||||||||||||||| ||||  ||||||||| ||||  ||||||| || ||||||||| ||    
T  52341684 agaaatattatgttggaaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatgcaaacatactaattttggtttcct 52341585  T
Q  482 taacaagt 489  Q
    ||||||||    
T  52341584 taacaagt 52341577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 489
Target Start/End: Original strand, 39158355 - 39158459
Alignment:
Q  386 aatattatattgagaaatgatgaaaaatgatcaatttaacttttt-aaaagtaaaaaattgttgaattcaatataaacataatacttttggttttcttaa 484  Q
    |||||| ||||| |||| | |||||| ||||| |||||||||||| |||| ||||| |||||| |||||||| |||||||| |||||||| ||| |||||    
T  39158355 aatattgtattgggaaagggtgaaaagtgatctatttaactttttaaaaattaaaatattgttcaattcaatgtaaacatactacttttgatttccttaa 39158454  T
Q  485 caagt 489  Q
    |||||    
T  39158455 caagt 39158459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 487
Target Start/End: Original strand, 42627099 - 42627229
Alignment:
Q  360 gaaacattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaat 456  Q
    ||||||||| |||| |||||||||   |||||||| | ||  |||||| |||| |||||| ||||||||||||||||| |||||||||||| |||  | |    
T  42627099 gaaacattgattaagatgataaaaatagaaatattgttttaggaaatggtgaagaatgatgaatttaactttttaaaattaaaaaattgttaaatctagt 42627198  T
Q  457 ataaacataatacttttggttttcttaacaa 487  Q
    ||||||||| ||  |||||||| ||||||||    
T  42627199 ataaacatattatctttggtttccttaacaa 42627229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 2728315 - 2728256
Alignment:
Q  222 tattaaaaatagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctc 281  Q
    ||||||||||||||| |  ||||||||||||| ||||||||||||||||||| |||||||    
T  2728315 tattaaaaatagcaagtaagttgttggttgtataatttagttgttcacatatcattcctc 2728256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 485
Target Start/End: Original strand, 31010431 - 31010556
Alignment:
Q  364 cattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatata 459  Q
    |||||||||| |||||||||   |||| ||| |||||||||||||| |||| |||  ||||||||||||||||||| |||| |||| ||||||  || ||    
T  31010431 cattggttaagatgataaaaatagaaacattgtattgagaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattgctgaattatatgta 31010530  T
Q  460 aacataatacttttggttttcttaac 485  Q
    || ||  |||||||| ||||||||||    
T  31010531 aatatgctacttttgattttcttaac 31010556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 385 - 506
Target Start/End: Original strand, 30199814 - 30199936
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttctta 483  Q
    |||||||  ||||| ||||||| |||| |||| || |||| ||||||||||| |||| ||| |||||| |||| |||||  | ||||||| |||||||||    
T  30199814 aaatattgcattgaaaaatgataaaaagtgatgaaattaattttttaaaagttaaaatattattgaatccaatgtaaactcattacttttagttttctta 30199913  T
Q  484 acaagtacacttgttagcataat 506  Q
    | |||| || |||||||||||||    
T  30199914 ataagtgcatttgttagcataat 30199936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 365 - 485
Target Start/End: Complemental strand, 55120195 - 55120072
Alignment:
Q  365 attggttaaaatgataaaag---aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataa 460  Q
    ||||||||| |||||||||    ||||||| |||||| ||||  ||||||||||  ||||| ||||||||||||| |||| |||||||||||||| ||||    
T  55120195 attggttaagatgataaaaattaaaatattgtattgaaaaatagtgaaaaatgaagaatttgactttttaaaagtcaaaacattgttgaattcaacataa 55120096  T
Q  461 acataatacttttggttttcttaac 485  Q
    | ||| || ||||| ||||||||||    
T  55120095 atatacta-ttttgattttcttaac 55120072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 485
Target Start/End: Complemental strand, 15986351 - 15986246
Alignment:
Q  381 aaagaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggtttt 479  Q
    ||||||||||| |||||| ||||| |||||| || | ||||||| ||||||||||| | || |||||||||||||||  ||||||  ||||||| ||||     
T  15986351 aaagaaatattgtattgaaaaatggtgaaaagtggtgaatttaaatttttaaaagtcagaatattgttgaattcaatgcaaacattctacttttagtttc 15986252  T
Q  480 cttaac 485  Q
    ||||||    
T  15986251 cttaac 15986246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 385 - 489
Target Start/End: Complemental strand, 29462882 - 29462777
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttctta 483  Q
    |||||||||||||| ||||||||||||||||  ||||| | ||||| ||||| ||||  ||||||||| |||| |||||||| || ||| | ||| ||||    
T  29462882 aaatattatattgaaaaatgatgaaaaatgaggaattttattttttcaaagtcaaaatgttgttgaatccaatgtaaacatattaatttcgatttcctta 29462783  T
Q  484 acaagt 489  Q
    ||||||    
T  29462782 acaagt 29462777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 479
Target Start/End: Original strand, 32885015 - 32885110
Alignment:
Q  384 gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggtttt 479  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||| |||||| || ||| ||||||||| ||||  |||| || |||||||| ||||    
T  32885015 gaaatattgtattgagaaatgaagaaaaatgat-aatttaactttataaaagttagaaatttgttgaatccaatgcaaacctactacttttgatttt 32885110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 487
Target Start/End: Complemental strand, 46823538 - 46823450
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaacaa 487  Q
    ||||| |||||| | || ||||||||||||||||||| ||||||||||||| |||||| | ||| || || ||||||||| ||||||||    
T  46823538 aaatggtgaaaagttatgaatttaactttttaaaagtcaaaaaattgttgatttcaatgtcaacctactatttttggtttccttaacaa 46823450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 51267007 - 51266915
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttg 474  Q
    ||||||||  |||||| ||||| |||||| |||| ||||||||||||||||||| ||||  |||||||| |||||| ||||||  ||||||||    
T  51267007 agaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatacaaacatgctacttttg 51266915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 399 - 485
Target Start/End: Original strand, 31494703 - 31494790
Alignment:
Q  399 gaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||| |||||| |||  |||||||||||||||| |  |||| ||||||||||||||| |||| ||| |||||||||||| ||||||    
T  31494703 gaaatggtgaaaagtgaagaatttaactttttaaatgacaaaacattgttgaattcaatgtaaatatattacttttggtttccttaac 31494790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 456
Target Start/End: Complemental strand, 48513749 - 48513628
Alignment:
Q  339 aaaatgttaaatagtgtctgtgaaacattggttaaaatgataaaag---aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag 435  Q
    |||||| |||||||||||| |   ||||||||||| | |||||||    ||| ||| |||||| |||||||||||| |||   |||||||||||||||||    
T  48513749 aaaatgctaaatagtgtctttaggacattggttaagacgataaaaataaaaacattgtattgaaaaatgatgaaaagtgaaagatttaactttttaaaag 48513650  T
Q  436 t-aaaaaattgttgaattcaat 456  Q
    | |||| |||||||||||||||    
T  48513649 tcaaaacattgttgaattcaat 48513628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 473
Target Start/End: Original strand, 51018360 - 51018496
Alignment:
Q  340 aaatgttaaatagtgtctgtgaaacattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt 436  Q
    |||||||||||||||||  | ||  ||||||||| |||||||||   |||| |||  ||||| ||||| |||||| |||  ||||||||||||||||| |    
T  51018360 aaatgttaaatagtgtcctt-aagtattggttaagatgataaaaatagaaacattgcattgaaaaatggtgaaaagtgaagaatttaactttttaaaaat 51018458  T
Q  437 aaaaa-attgttgaattcaatataaacataatactttt 473  Q
     |||| ||||||||||||||| |||| ||| |||||||    
T  51018459 taaaacattgttgaattcaatgtaaatatactactttt 51018496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 484
Target Start/End: Original strand, 1457561 - 1457663
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||||||| ||||| || | || |||| |||| ||||||| |||||||||| ||||| |||||||||||||||  |||| || |||||||| ||| ||    
T  1457561 agaaatattacattgaaaagtaataaaaattgataaatttaattttttaaaagttaaaatattgttgaattcaatgcaaacttattacttttgatttcct 1457660  T
Q  482 taa 484  Q
    |||    
T  1457661 taa 1457663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 455
Target Start/End: Complemental strand, 1801683 - 1801613
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaa 455  Q
    |||||||||||| ||||||| |||||| | || ||||||||||||||||  ||||| ||| ||||||||||    
T  1801683 aaatattatattaagaaatggtgaaaagttataaatttaactttttaaagttaaaatatttttgaattcaa 1801613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 484
Target Start/End: Complemental strand, 20456652 - 20456550
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||| || |||||| |||||||||||| | || ||||||| |||||||| | ||||| |||||||||||||||  ||||||  |||||||| ||| ||    
T  20456652 agaaatgttttattgaaaaatgatgaaaagttatgaatttaaatttttaaatgttaaaatattgttgaattcaatgcaaacatgctacttttgatttcct 20456553  T
Q  482 taa 484  Q
    |||    
T  20456552 taa 20456550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 441
Target Start/End: Original strand, 41956239 - 41956297
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||||| | ||||  ||||||||||||||||| ||||||||||||||||||| ||||    
T  41956239 agaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaa 41956297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 485
Target Start/End: Complemental strand, 45088133 - 45088050
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||||||||| |||| ||||||| ||||| ||||| ||||  ||||||| |||||  ||||||| |||||||||||| ||||||    
T  45088133 aaatgatgaaaagtgataaatttaattttttgaaagtcaaaa--tgttgaaatcaatgcaaacatactacttttggtttccttaac 45088050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 489
Target Start/End: Complemental strand, 966663 - 966558
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaacttttt-aaaagtaaaaaattgttgaattcaatataaacataatacttttggttttctta 483  Q
    |||||||  ||||| ||||||| |||||| || ||||||||||||| |||| ||||| |||||||||| ||||  |||  || |||||||| ||| ||||    
T  966663 aaatattgcattgaaaaatgataaaaaattatgaatttaactttttaaaaattaaaatattgttgaatccaatgaaaaactactacttttgatttcctta 966564  T
Q  484 acaagt 489  Q
    ||||||    
T  966563 acaagt 966558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 30475498 - 30475405
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||| ||||| |||||| |||| |||||||||||||||| || |||| |||||||||  ||||  ||||||| ||||||||| || ||||||    
T  30475498 tattgaaaaatggtgaaaagtgataaatttaactttttaaatgtcaaaatattgttgaaaccaatgcaaacatattacttttggcttccttaac 30475405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 394 - 450
Target Start/End: Complemental strand, 31755010 - 31754953
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaa 450  Q
    ||||| |||||||||||| |||| ||||||||||||||||||| |||| |||||||||    
T  31755010 attgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 31754953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 3769896 - 3769804
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttg 474  Q
    |||||||||  ||||| ||||| |||||| |||| ||||| |||||||||||| ||||| |||||| ||||||||  |||| || ||||||||    
T  3769896 agaaatattgcattgaaaaatggtgaaaagtgataaatttgactttttaaaagttaaaatattgttaaattcaatgcaaacctactacttttg 3769804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 441
Target Start/End: Original strand, 27839343 - 27839390
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||| ||||    
T  27839343 attgaaaaatgatgaaaaatgataaatttaagtttttaaaagtcaaaa 27839390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 489
Target Start/End: Complemental strand, 30618032 - 30617925
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||||||  |||| |||||||||||||   || |||||||||||||||||| | ||| |||||||||| ||||  || | || |||||||||||| ||    
T  30618032 agaaatattgcattgggaaatgatgaaaagcaatgaatttaactttttaaaagttcaaatattgttgaatccaatgcaatcctactacttttggtttcct 30617933  T
Q  482 taacaagt 489  Q
    ||| ||||    
T  30617932 taataagt 30617925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 441
Target Start/End: Complemental strand, 45688815 - 45688768
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    ||||| |||||||||||| |||| ||||||||||||||||||| ||||    
T  45688815 attgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaa 45688768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 50514639 - 50514742
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||||| | ||||| ||||| | |||| |||| |||||||||||||||||| |||||  ||||||||  ||||  ||||||  |||||||||||| ||    
T  50514639 agaaatataacattgaaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggtttcct 50514738  T
Q  482 taac 485  Q
    ||||    
T  50514739 taac 50514742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 462
Target Start/End: Complemental strand, 3472204 - 3472126
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaac 462  Q
    |||||||||||| | ||||| ||| || || | |||||||||||||||||| ||||| |||||| |||| |||||||||    
T  3472204 aaatattatattaaaaaatggtgacaagtgttgaatttaactttttaaaagttaaaacattgttaaatttaatataaac 3472126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 489
Target Start/End: Complemental strand, 23260786 - 23260680
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaa-tgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttctt 482  Q
    |||||||  ||||||||||| ||||||  |||| |||||||||||||||||| ||||| ||| || |||||||| ||||  || | ||||||||||  ||    
T  23260786 aaatattgcattgagaaatggtgaaaagctgatgaatttaactttttaaaagttaaaatattattaaattcaatttaaatttacttcttttggtttcttt 23260687  T
Q  483 aacaagt 489  Q
    |||||||    
T  23260686 aacaagt 23260680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 451
Target Start/End: Complemental strand, 33803452 - 33803386
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaat 451  Q
    ||||||| |||||| |||| ||||||||| || |||||||||||| |||  |||||| |||||||||    
T  33803452 aaatattgtattgaaaaattatgaaaaataataaatttaacttttaaaagttaaaaatttgttgaat 33803386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 544 - 586
Target Start/End: Original strand, 33977775 - 33977817
Alignment:
Q  544 atcttataaattatacattcatagcattaaaactttaaaaatt 586  Q
    |||||| |||||||||||||||| |||||||| ||||||||||    
T  33977775 atcttaaaaattatacattcataccattaaaagtttaaaaatt 33977817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 485
Target Start/End: Complemental strand, 40436147 - 40436061
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaa-agtaaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||||||||||| || |||||||||||||||| |  |||| |||||||||  |||   ||||||  |||||||||||||||||||    
T  40436147 aaatgatgaaaaataataaatttaactttttaaatatcaaaatattgttgaaaccaaagcaaacatgctacttttggttttcttaac 40436061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 37771155 - 37771196
Alignment:
Q  406 tgaaaaatgatcaatttaactttttaaaagtaaaaaattgtt 447  Q
    ||||||||||| ||||  ||||||||||||||||||||||||    
T  37771155 tgaaaaatgatgaattctactttttaaaagtaaaaaattgtt 37771196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 590
Target Start/End: Original strand, 46886959 - 46887012
Alignment:
Q  537 aaattttatcttataaattatacattcatagcattaaaactttaaaaattgact 590  Q
    ||||||||||||| |||||||| ||||||  |||| ||| ||||||||||||||    
T  46886959 aaattttatcttaaaaattatatattcattacattgaaattttaaaaattgact 46887012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 441
Target Start/End: Complemental strand, 55669805 - 55669764
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||    
T  55669805 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 55669764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 453
Target Start/End: Original strand, 2940276 - 2940336
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattc 453  Q
    |||| |||||| ||||||||| |  |||| |||||||||||| ||||||||||||||||||    
T  2940276 attgggaaatggtgaaaaatggttgatttgactttttaaaagttaaaaaattgttgaattc 2940336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 485
Target Start/End: Original strand, 23690980 - 23691048
Alignment:
Q  418 aatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||||| |||||||| | |||| ||||||||||||||| |||| ||| || ||||||||| ||||||    
T  23690980 aatttaaccttttaaaaatcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaac 23691048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 35808445 - 35808525
Alignment:
Q  406 tgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||| ||||||||||||||||||| ||||  ||||||||  ||||  ||||||  ||||||||| || ||||||    
T  35808445 tgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaac 35808525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 35927317 - 35927369
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaat 451  Q
    ||||| ||||||| ||| |||||||||||||||||| ||||| ||||||||||    
T  35927317 aaatggtgaaaaacgatgaatttaactttttaaaagttaaaatattgttgaat 35927369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 5e-42; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 122 - 285
Target Start/End: Complemental strand, 9388720 - 9388557
Alignment:
Q  122 ttttaaaagagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatat 221  Q
    |||||||||| ||||||||| ||||| | |||||||||| ||| ||||||||||  | ||| ||||||||||||||| ||||||||||||  ||||||||    
T  9388720 ttttaaaagaactatgttatttgtacctctaaaattgaacaaccaatgcaacaacctctaattttgtgaggagcacataaatcgaaatcagacaaaatat 9388621  T
Q  222 tattaaaaatagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctctttt 285  Q
     ||||||||||| ||||  |||||||||||||||||||| |||||||||||| |||||||||||    
T  9388620 cattaaaaatagtaaataagttgttggttgtacaatttaattgttcacatatcattcctctttt 9388557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 364 - 485
Target Start/End: Complemental strand, 14331942 - 14331817
Alignment:
Q  364 cattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatata 459  Q
    ||||||||||||||||||||   |||| ||| ||||| |||||| ||||||||||  ||||||||||||||||||| |||| ||||||||||||||| ||    
T  14331942 cattggttaaaatgataaaaatagaaacattgtattgggaaatggtgaaaaatgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgta 14331843  T
Q  460 aacataatacttttggttttcttaac 485  Q
    || ||| || ||||||||| ||||||    
T  14331842 aatatactatttttggtttccttaac 14331817  T

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Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 10366681 - 10366564
Alignment:
Q  166 aatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaaatagcaaatgtgttgttggttgtacaatttagttgt 265  Q
    ||||||||||  | ||||||| ||||||||||| ||||||||||||   ||||||| |||||||||| |||||  |||||||||||||||||||  ||||    
T  10366681 aatgcaacaacctttaactttatgaggagcacataaatcgaaatcaaataaaatatcattaaaaataacaaataagttgttggttgtacaatttgattgt 10366582  T
Q  266 tcacatatgattcctctt 283  Q
    |||| ||| |||||||||    
T  10366581 tcacgtatcattcctctt 10366564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 364 - 485
Target Start/End: Complemental strand, 43168246 - 43168121
Alignment:
Q  364 cattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatata 459  Q
    |||||||||| |||||||||   |||| ||| ||||| |||||| |||||| |||  | ||||||||||||||||| |||| ||||||||||||||| ||    
T  43168246 cattggttaagatgataaaaatagaaacattgtattgggaaatggtgaaaagtgaagagtttaactttttaaaagtcaaaacattgttgaattcaatgta 43168147  T
Q  460 aacataatacttttggttttcttaac 485  Q
    || ||| |||||||| ||| ||||||    
T  43168146 aatatactacttttgatttccttaac 43168121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 364 - 485
Target Start/End: Original strand, 44359673 - 44359798
Alignment:
Q  364 cattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatata 459  Q
    |||||||||| |||||||||   |||| ||| ||| | |||||| |||||| |||  ||||||||||||||||||| |||| ||||||||||||||| ||    
T  44359673 cattggttaagatgataaaaatagaaacattgtatcgggaaatggtgaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgta 44359772  T
Q  460 aacataatacttttggttttcttaac 485  Q
    || ||| || ||||||||| ||||||    
T  44359773 aatatactatttttggtttccttaac 44359798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 457
Target Start/End: Original strand, 21268318 - 21268392
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaata 457  Q
    |||||| || |||||||||||| |||||||||||  ||||||||||| |||  ||||||||||||||||||||||    
T  21268318 agaaatgttgtattgagaaatggtgaaaaatgatagatttaacttttaaaagttaaaaaattgttgaattcaata 21268392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 41898882 - 41898964
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacat 464  Q
    ||||||||| |||||| ||||| | |||| |||| |||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  41898882 agaaatattgtattgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattccatataaacat 41898964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 489
Target Start/End: Complemental strand, 17403029 - 17402924
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttctta 483  Q
    ||||||| |||| | ||||| | |||| |||| ||||||||||||||||||| |||| ||||||||||  ||| ||||  || |||||||||||||||||    
T  17403029 aaatattgtattaaaaaatggtaaaaagtgatgaatttaactttttaaaagtcaaaatattgttgaatctaatgtaaaactactacttttggttttctta 17402930  T
Q  484 acaagt 489  Q
    ||||||    
T  17402929 acaagt 17402924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 488
Target Start/End: Original strand, 27160139 - 27160222
Alignment:
Q  406 tgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaacaag 488  Q
    ||||||||||| ||||| |||||| |||||| |||| || |||||||||||| ||||| || |||||||||||||| |||||||    
T  27160139 tgaaaaatgatgaatttgacttttcaaaagttaaaatatagttgaattcaatgtaaacctactacttttggttttcctaacaag 27160222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 489
Target Start/End: Complemental strand, 51424240 - 51424133
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||| |||||| ||||    |||| |||| |||||||||||||||| || |||| |||||||||| |||| |||||||| ||||||||||||  |    
T  51424240 agaaatattgtattgaaaaattgctaaaagtgatgaatttaactttttaaaggttaaaacattgttgaatccaatgtaaacatattacttttggtttctt 51424141  T
Q  482 taacaagt 489  Q
    ||||||||    
T  51424140 taacaagt 51424133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 485
Target Start/End: Original strand, 8892829 - 8892897
Alignment:
Q  418 aatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||| ||| ||||||| |||| ||||||    
T  8892829 aatttaactttttaaaagtcaaaacattgttaaattcaatataaatatactacttttagtttccttaac 8892897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 454
Target Start/End: Complemental strand, 16691399 - 16691305
Alignment:
Q  364 cattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattca 454  Q
    |||||||||| |||||||||   |||| ||| ||||| |||||| | ||||||||  ||||||||||||||||||| |||| |||||||||||||    
T  16691399 cattggttaagatgataaaaatagaaacattgtattgggaaatggtaaaaaatgaagaatttaactttttaaaagtcaaaacattgttgaattca 16691305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 28850933 - 28851037
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttctt 482  Q
    |||||||| | ||||  ||||| |||||| |||| ||||||||||||||||||| |||||||||||||  ||||  ||| ||  ||||||||  ||||||    
T  28850933 agaaatataacattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaaattgttgaaaccaatgcaaatatgctacttttgactttctt 28851032  T
Q  483 aacaa 487  Q
    |||||    
T  28851033 aacaa 28851037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 487
Target Start/End: Complemental strand, 34644223 - 34644143
Alignment:
Q  408 aaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaacaa 487  Q
    ||||||||| ||||| ||| ||||||||| |||| ||||||||||||||| ||||| || || ||||||||| ||||||||    
T  34644223 aaaaatgatgaatttgactatttaaaagttaaaatattgttgaattcaatgtaaacttagtagttttggtttccttaacaa 34644143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 452
Target Start/End: Complemental strand, 27210791 - 27210737
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagt--aaaaaattgttgaatt 452  Q
    ||||| |||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  27210791 aaatggtgaaaaatgatcaatttaactttttaaaagttaaaaaagttgttgaatt 27210737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 478
Target Start/End: Original strand, 25177482 - 25177568
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttt 478  Q
    |||||||||||  ||||||||||  || |||| ||||||||||| |||| || |||||||||||| |||| ||| ||||||||||||    
T  25177482 tattgagaaatagtgaaaaatgaagaaattaattttttaaaagtcaaaacatcgttgaattcaatgtaaatatactacttttggttt 25177568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 473
Target Start/End: Original strand, 26469616 - 26469696
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatactttt 473  Q
    ||||| |||| |||||||||||| ||||||||||||||||||| |||| ||| |||||  ||||  ||||||| |||||||    
T  26469616 attgaaaaataatgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaaccaatgaaaacatactactttt 26469696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 22346260 - 22346363
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||  |||||| ||||| |||||| |||| ||||||| ||||||||||| |||| |||||||||  ||||  ||||||  ||||||||| || ||    
T  22346260 agaaatatagtattgaaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttcct 22346359  T
Q  482 taac 485  Q
    ||||    
T  22346360 taac 22346363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 488
Target Start/End: Complemental strand, 33657908 - 33657811
Alignment:
Q  392 atattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaatt--gttgaattcaatataaacataatacttttggttttcttaacaag 488  Q
    ||||||| ||||||||||||||  | |||| |||||||| |||||||||||||  ||||| |||||| | || ||  || |||||||||||||||||||    
T  33657908 atattgaaaaatgatgaaaaattgtgaattcaactttttgaaagtaaaaaattttgttgatttcaatgttaatatg-tatttttggttttcttaacaag 33657811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 489
Target Start/End: Complemental strand, 40920293 - 40920161
Alignment:
Q  363 acattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatg--atcaatttaactttttaaaag-taaaaaattgttgaattcaat 456  Q
    ||||||||||| | |||||||   ||||||||  |||||||| || |||||| ||  || |||||||||||||||||| ||||| |||||||||| ||||    
T  40920293 acattggttaagaggataaaaatagaaatattgcattgagaagtggtgaaaagtgtgattaatttaactttttaaaagttaaaatattgttgaatccaat 40920194  T
Q  457 ataaacataatacttttggttttcttaacaagt 489  Q
      |||   | |||||||||||| ||||||||||    
T  40920193 gcaaatccactacttttggtttccttaacaagt 40920161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 441
Target Start/End: Original strand, 42607358 - 42607405
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||| ||||    
T  42607358 attgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 42607405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 485
Target Start/End: Complemental strand, 43433858 - 43433755
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaacttttt-aaaagtaaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||  |||| | ||||| |||||| |||| ||||||||||||| |||| |||||  ||||||||  ||||| ||||||| ||||||||| || ||    
T  43433858 agaaatatagtattaaaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaaacatactacttttggcttcct 43433759  T
Q  482 taac 485  Q
    ||||    
T  43433758 taac 43433755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 485
Target Start/End: Complemental strand, 48938718 - 48938616
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||| ||||   ||||| |||||| |||  |||||| |||||||||||| |||| ||||||||||| ||| |||| ||| |||||||||||| ||    
T  48938718 agaaatattgtattagaaaatggtgaaaagtgaaaaattta-ctttttaaaagtcaaaacattgttgaatttaatgtaaatatactacttttggtttcct 48938620  T
Q  482 taac 485  Q
    ||||    
T  48938619 taac 48938616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 485
Target Start/End: Complemental strand, 11386039 - 11385961
Alignment:
Q  408 aaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||| |||| ||||||||||||||||||| ||||  ||||||||  ||||  ||||||  |||||||||||||||||||    
T  11386039 aaaattgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggttttcttaac 11385961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 36596663 - 36596589
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaat 456  Q
    |||||| || ||||||||||  ||||||| ||||  |||| | ||||||||||| ||||||||||||||||||||    
T  36596663 agaaatgttgtattgagaaacaatgaaaattgatatatttgaatttttaaaagttaaaaaattgttgaattcaat 36596589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 41151751 - 41151793
Alignment:
Q  513 catttgataggaaatctaataaagaaattttatcttataaatt 555  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||    
T  41151751 catttgataagaaatctaataaataaattttatcttaaaaatt 41151793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 441
Target Start/End: Original strand, 7190515 - 7190556
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||||||||| |||| ||||||||||||||||||| ||||    
T  7190515 aaatgatgaaaagtgataaatttaactttttaaaagttaaaa 7190556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 450
Target Start/End: Original strand, 41147512 - 41147569
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaa 450  Q
    ||||| ||||| | ||||||||| ||||||||||||||||||| |||| |||||||||    
T  41147512 attgaaaaatggtaaaaaatgattaatttaactttttaaaagtcaaaatattgttgaa 41147569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 15444956 - 15445028
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaat 456  Q
    ||||||| |||||||||||| |||||| | || || || | |||||||||| ||||||||| |||||||||||    
T  15444956 aaatattgtattgagaaatggtgaaaagtaataaagttgattttttaaaagttaaaaaattattgaattcaat 15445028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 450
Target Start/End: Complemental strand, 40845334 - 40845266
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaa 450  Q
    ||||||||  |||||| ||||| |||||| |||| ||||||||||||||||| | |||| |||||||||    
T  40845334 agaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgttgaa 40845266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 134 - 282
Target Start/End: Complemental strand, 29396592 - 29396444
Alignment:
Q  134 tatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaaatag 233  Q
    |||||||| ||||||| |||||||| | ||| ||||||||||  | ||||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  29396592 tatgttatttgtacatctaaaattggacaaccaatgcaacaacctttaactttgtgaggagcacaaaaatcgaaatcaatcaaaatatcattaaaaatag 29396493  T
Q  234 caaatgtgttgttggttgtacaatttagttgttcacatatgattcctct 282  Q
    |||||  ||||||||||||||||||| | ||||||||||| ||||||||    
T  29396492 caaataagttgttggttgtacaatttggctgttcacatatcattcctct 29396444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 131 - 273
Target Start/End: Complemental strand, 22996123 - 22995983
Alignment:
Q  131 agctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaaa 230  Q
    ||||||||||| ||||||| |||||||| | ||| |||| |||||  | ||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  22996123 agctatgttatttgtacatctaaaattggacaaccaatgtaacaacctttaactttgtgaggagcacataaatcgaaatcaggcaaaatattattaaaaa 22996024  T
Q  231 tagcaaatgtgttgttggttgtacaatttagttgttcacatat 273  Q
    |||||||   |||||||||| |||||||| |||||||||||||    
T  22996023 tagcaaa--agttgttggttatacaatttggttgttcacatat 22995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 131 - 273
Target Start/End: Original strand, 23792277 - 23792417
Alignment:
Q  131 agctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaaa 230  Q
    ||||||||||| ||||||| |||||||| | ||| |||| |||||  | ||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  23792277 agctatgttatttgtacatctaaaattggacaaccaatgtaacaacctttaactttgtgaggagcacataaatcgaaatcaggcaaaatattattaaaaa 23792376  T
Q  231 tagcaaatgtgttgttggttgtacaatttagttgttcacatat 273  Q
    |||||||   |||||||||| |||||||| |||||||||||||    
T  23792377 tagcaaa--agttgttggttatacaatttggttgttcacatat 23792417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 134 - 281
Target Start/End: Complemental strand, 18141530 - 18141383
Alignment:
Q  134 tatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaaatag 233  Q
    |||||||| |||||||||||||||| | ||| ||| ||||||  | ||||||||||||||| ||| |||||||||||| | |||||||||||||||||||    
T  18141530 tatgttatttgtacatttaaaattggacaaccaatacaacaacctttaactttgtgaggagtacataaatcgaaatcaagtaaaatattattaaaaatag 18141431  T
Q  234 caaatgtgttgttggttgtacaatttagttgttcacatatgattcctc 281  Q
     ||||  |||| ||||||||| |||| ||||||||||||| |||||||    
T  18141430 aaaataagttgctggttgtacgatttggttgttcacatatcattcctc 18141383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 22957077 - 22956988
Alignment:
Q  184 tttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaaatagcaaatgtgttgttggttgtacaatttagttgttcacatat 273  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||||||||| |  ||||||||||||||||||| ||| || ||||||    
T  22957077 tttgtgaggagcacataaatcgaaatcaagtaaaatattattaaaaatagcaagtaagttgttggttgtacaatttggttatttacatat 22956988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 23831315 - 23831404
Alignment:
Q  184 tttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaaatagcaaatgtgttgttggttgtacaatttagttgttcacatat 273  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||||||||| |  ||||||||||||||||||| ||| || ||||||    
T  23831315 tttgtgaggagcacataaatcgaaatcaagtaaaatattattaaaaatagcaagtaagttgttggttgtacaatttggttatttacatat 23831404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 129 - 252
Target Start/End: Original strand, 7045131 - 7045254
Alignment:
Q  129 agagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaa 228  Q
    ||||||||||||| ||||||  |||||||  | ||| |||||||||| |||||| ||||||||||||||| ||||| || |||  ||||||||  |||||    
T  7045131 agagctatgttatgtgtacaactaaaatttgacaaccaatgcaacaacttataagtttgtgaggagcacagaaatcaaattcaaacaaaatatatttaaa 7045230  T
Q  229 aatagcaaatgtgttgttggttgt 252  Q
    ||||| |||||  |||||||||||    
T  7045231 aatagtaaatgaattgttggttgt 7045254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 12226357 - 12226460
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||| ||| |||||||||||||| |||| |||  ||||||||||||| |||||||||| ||||||||||||||| |||| ||| || ||||||||| ||    
T  12226357 agaaacattgtattgagaaatgattaaaagtgaagaatttaactttttgaaagtaaaaacattgttgaattcaatgtaaatatactatttttggtttcct 12226456  T
Q  482 taac 485  Q
    ||||    
T  12226457 taac 12226460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 138 - 273
Target Start/End: Original strand, 21203236 - 21203377
Alignment:
Q  138 ttatatgtacatttaaaattgaaaaacaaatgcaacaa--ttta----taactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaaat 231  Q
    |||| |||||||||||||||| | ||| ||||||||||  ||||    ||||||||| |||| || | ||||| |||||| |||||| ||||||||||||    
T  21203236 ttatttgtacatttaaaattggacaaccaatgcaacaacctttaactttaactttgtaaggatcatagaaatcaaaatcaagcaaaacattattaaaaat 21203335  T
Q  232 agcaaatgtgttgttggttgtacaatttagttgttcacatat 273  Q
    | ||| |  ||||||| ||||||||||| |||||||||||||    
T  21203336 atcaagtaagttgttgattgtacaatttggttgttcacatat 21203377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 27127533 - 27127586
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt 436  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  27127533 agaaatattgtattgagaaatggtgaaaaatgatgaatttaactttttaaaagt 27127586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 29964374 - 29964281
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||||||||| |||||||| |  ||||||||||||||||||| |||| ||||||||||||||| |||| ||| || |||||| || ||||||    
T  29964374 tattgagaaatggtgaaaaataaataatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatattatttttgggttccttaac 29964281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 10855515 - 10855457
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||||| ||||||| |||||||||||| |||| ||||||||||||||||||| ||||    
T  10855515 agaaatataatattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaa 10855457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 281
Target Start/End: Original strand, 9961152 - 9961297
Alignment:
Q  136 tgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaaatagca 235  Q
    |||||| ||||||  |||||||||| ||  |||| ||||   |||||| ||||||| |||||  ||||||||||||  ||||| ||  | ||||||||||    
T  9961152 tgttatttgtacaactaaaattgaacaattaatgtaacaccatataacattgtgagaagcacgtaaatcgaaatcaatcaaaaaatattaaaaaatagca 9961251  T
Q  236 aatgtgttgttggttgtacaatttagttgttcacatatgattcctc 281  Q
    |||  ||||||||||||||||   || ||||||||||| |||||||    
T  9961252 aataagttgttggttgtacaaacgagatgttcacatatcattcctc 9961297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 485
Target Start/End: Original strand, 22414634 - 22414719
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||||| ||| | ||||||||||||||||| |||| || ||||||| |||| ||||||| |  ||||||||| ||||||    
T  22414634 aaatgatgaaaaaagatgattttaactttttaaaagtcaaaatttattgaatttaatacaaacatacttattttggtttccttaac 22414719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 485
Target Start/End: Complemental strand, 26539196 - 26539092
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt--aaaaaattgttgaattcaatataaacataatacttttggttttc 480  Q
    ||||||||| |||||| |||||||||||| ||||  |||| ||||||||||| |  ||||||||||||||||||||  |||| || || |||| |||| |    
T  26539196 agaaatattgtattgaaaaatgatgaaaattgatagatttgactttttaaaaattaaaaaaattgttgaattcaatgcaaacttactatttttagtttcc 26539097  T
Q  481 ttaac 485  Q
    |||||    
T  26539096 ttaac 26539092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 485
Target Start/End: Original strand, 34780039 - 34780107
Alignment:
Q  418 aatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||| ||| |||||||| ||| ||||||    
T  34780039 aatttaactttttaaaagttaaaacattgttgaattcaatgtaaatatactacttttgatttccttaac 34780107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 484
Target Start/End: Original strand, 7274240 - 7274342
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaa-ttgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||||| | ||||  |||||| ||||| |||| |||||||| |||||||||| ||||  |||||||| |||||| ||||||  |||||||||||| ||    
T  7274240 agaaatataacattggaaaatgacgaaaagtgataaatttaacattttaaaagttaaaatgttgttgaaatcaatacaaacatgttacttttggtttcct 7274339  T
Q  482 taa 484  Q
    |||    
T  7274340 taa 7274342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 28014718 - 28014644
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaat 456  Q
    ||||||||| ||||| |||||| ||||||||||| | ||| |||||||||||| ||||| |||||||||| ||||    
T  28014718 agaaatattgtattgggaaatggtgaaaaatgatgagtttgactttttaaaagttaaaatattgttgaatccaat 28014644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 450
Target Start/End: Original strand, 7875224 - 7875275
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaa 450  Q
    |||||||||||| |||| ||||||||||||||||||| |||| |||||||||    
T  7875224 aaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 7875275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 450
Target Start/End: Original strand, 7880470 - 7880521
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaa 450  Q
    |||||||||||| |||| ||||||||||||||||||| |||| |||||||||    
T  7880470 aaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 7880521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 464
Target Start/End: Original strand, 8324141 - 8324212
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaacttttt-aaaagtaaaaaattgttgaattcaatataaacat 464  Q
    ||||||||||  ||||||||||| ||||||||||||| |||| |||||  ||||||||  ||||||||||||    
T  8324141 attgagaaattgtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaaccaatataaacat 8324212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 434
Target Start/End: Complemental strand, 12775191 - 12775142
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaa 434  Q
    ||||||| |||| | || |||||||||||||| |||||||||||||||||    
T  12775191 aaatattgtattaaaaactgatgaaaaatgattaatttaactttttaaaa 12775142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 485
Target Start/End: Original strand, 31490738 - 31490819
Alignment:
Q  405 atgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||| ||||  |||||| |||| |||||| ||||||||||||||||||||| |||| || || |||| |||| ||||||    
T  31490738 atgaaaagtgatagatttaatttttaaaaagttaaaaaattgttgaattcaatacaaacttactatttttagtttccttaac 31490819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 485
Target Start/End: Original strand, 6507450 - 6507518
Alignment:
Q  418 aatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||||||||| | |||| ||||||||||||||| || | ||| |||||||| ||| ||||||    
T  6507450 aatttaactttttaaaaatcaaaacattgttgaattcaatgtatatatactacttttgatttccttaac 6507518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 12175632 - 12175584
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||| ||||||| |||| |||| ||||||||||||||||||| ||||    
T  12175632 tattgaaaaatgataaaaactgataaatttaactttttaaaagttaaaa 12175584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 485
Target Start/End: Original strand, 16437643 - 16437711
Alignment:
Q  418 aatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||||||||||||||||||||| |||||||||  ||||  ||||||  |||| ||||||| ||||||    
T  16437643 aatttaactttttaaaagtaaaaatattgttgaaaccaatgcaaacatgctactgttggtttccttaac 16437711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 1e-39; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 129 - 284
Target Start/End: Complemental strand, 901038 - 900883
Alignment:
Q  129 agagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaa 228  Q
    ||||||||||||| ||||||| |||||||| | ||| |||||||||| || ||| |||||||||||||   ||| | |||||||||||||||| ||||||    
T  901038 agagctatgttatttgtacatctaaaattggacaaccaatgcaacaacttttaattttgtgaggagcatggaaaacaaaatcatgcaaaatatcattaaa 900939  T
Q  229 aatagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctcttt 284  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||| ||||||||||    
T  900938 aatagcaaataagttgttggttgtacaatttggttgttcacatatcattcctcttt 900883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 130 - 282
Target Start/End: Complemental strand, 15434564 - 15434412
Alignment:
Q  130 gagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaa 229  Q
    ||||| |||||| ||||||| ||||| || | ||  |||| |||||  | ||||||| ||||||||||| ||||| |||||| ||||||||| |||||||    
T  15434564 gagctgtgttatttgtacatctaaaagtggacaattaatggaacaacctttaactttatgaggagcacagaaatcaaaatcaagcaaaatatcattaaaa 15434465  T
Q  230 atagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctct 282  Q
     ||||||||  ||||||||||||||||||| ||||||||||||| ||||||||    
T  15434464 gtagcaaataagttgttggttgtacaatttggttgttcacatatcattcctct 15434412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 130 - 281
Target Start/End: Complemental strand, 2250478 - 2250327
Alignment:
Q  130 gagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaa 229  Q
    |||||||||||| |||| || |||||||| | ||| ||||||| ||||| ||| ||||||||||| ||  ||||| |||||||||||||||| |||||||    
T  2250478 gagctatgttatttgtatatctaaaattggataaccaatgcaataatttttaattttgtgaggagtacggaaatcaaaatcatgcaaaatatcattaaaa 2250379  T
Q  230 atagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctc 281  Q
    |||  ||||   |||||| |||||||||||  || ||||||||| |||||||    
T  2250378 ataataaataaattgttgattgtacaatttgattcttcacatatcattcctc 2250327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 30840064 - 30839962
Alignment:
Q  128 aagagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaa 227  Q
    ||||||||| |||| ||||||| |||||||| | ||  |||| |||||  | ||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  30840064 aagagctatattatttgtacatataaaattggacaatcaatggaacaacctttaactttgtgaggagtacagaaatcgaaatcaagcaaaatattattaa 30839965  T
Q  228 aaa 230  Q
    |||    
T  30839964 aaa 30839962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 457
Target Start/End: Complemental strand, 24288570 - 24288495
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaata 457  Q
    |||||| || |||||||||||| |||||| ||||  ||||||||||||||||| || |||||||||||||||||||    
T  24288570 agaaatgttgtattgagaaatggtgaaaagtgatagatttaactttttaaaagttacaaaattgttgaattcaata 24288495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 457
Target Start/End: Original strand, 24373651 - 24373726
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaata 457  Q
    |||||| || |||||||||||| |||||| ||||  ||||||||||||||||| || |||||||||||||||||||    
T  24373651 agaaatgttgtattgagaaatggtgaaaagtgatagatttaactttttaaaagttacaaaattgttgaattcaata 24373726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 20184574 - 20184679
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||||||  ||||||||| | |||||| |||| ||||| |||||||||||| ||||| ||||||||||  |||| || |||| |||||||| ||| ||    
T  20184574 agaaatattgcattgagaaacggtgaaaagtgatgaatttcactttttaaaagttaaaacattgttgaatctaatacaatcatattacttttgatttcct 20184673  T
Q  482 taacaa 487  Q
    ||||||    
T  20184674 taacaa 20184679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 30839779 - 30839719
Alignment:
Q  222 tattaaaaatagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctct 282  Q
    ||||||||||||||| |   |||||||| ||||||||||||||||||||||| ||||||||    
T  30839779 tattaaaaatagcaagtaaattgttggtcgtacaatttagttgttcacatatcattcctct 30839719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 485
Target Start/End: Complemental strand, 39167644 - 39167576
Alignment:
Q  418 aatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||||||||| | |||| |||||| |||||||| |||| ||| |||||||||||||||||||    
T  39167644 aatttaactttttaaaaatcaaaacattgttaaattcaatgtaaatatattacttttggttttcttaac 39167576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 478
Target Start/End: Complemental strand, 39335531 - 39335460
Alignment:
Q  408 aaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttt 478  Q
    |||| |||| ||||||||||||||||||| ||||  ||||||||| ||||| |||||||||| |||||||||    
T  39335531 aaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatacaaacataataattttggttt 39335460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 472
Target Start/End: Original strand, 4293835 - 4293947
Alignment:
Q  364 cattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatata 459  Q
    |||||||||||| |||||||   | |||||| |||||||||||||| || | |  | ||||||||||||||||||| |||| ||| |||||| |||||||    
T  4293835 cattggttaaaaggataaaaatagtaatattgtattgagaaatgataaagagtagtgaatttaactttttaaaagtcaaaagattattgaatccaatata 4293934  T
Q  460 aacataatacttt 472  Q
    || ||| ||||||    
T  4293935 aatatactacttt 4293947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 5151572 - 5151514
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||||| | ||||  ||||||||||||||||| ||||||||||||||||||| ||||    
T  5151572 agaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaa 5151514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 256
Target Start/End: Complemental strand, 36193893 - 36193765
Alignment:
Q  128 aagagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattatta- 226  Q
    |||||| |||||||||||||| | ||||||||| ||| |||||||||  || |||  |||||| ||||||  ||||||||||||   |||| | |||||     
T  36193893 aagagcaatgttatatgtacaatcaaaattgaacaactaatgcaacaccttttaatattgtgaagagcacgcaaatcgaaatca-ctaaaaaaatattat 36193795  T
Q  227 aaaatagcaaatgtgttgttggttgtacaa 256  Q
    |||||||||||   ||||||||||||||||    
T  36193794 aaaatagcaaaaaggttgttggttgtacaa 36193765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 383 - 455
Target Start/End: Complemental strand, 39076692 - 39076619
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaa 455  Q
    |||||| || |||||||||||| | |||||||||   ||||| |||||||||| ||||||||||||||||||||    
T  39076692 agaaatgttgtattgagaaatggtaaaaaatgataggtttaattttttaaaagttaaaaaattgttgaattcaa 39076619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 485
Target Start/End: Original strand, 10163687 - 10163755
Alignment:
Q  418 aatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||| ||| || |||| |||| ||||||    
T  10163687 aatttaactttttaaaagtcaaaatattgctgaattcaatataaatatactatttttagtttacttaac 10163755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 28599682 - 28599754
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaat 456  Q
    |||||||||||||  ||||  ||||||||||| ||||| |||||||||||| |||||| || |||||||||||    
T  28599682 aaatattatattggaaaatagtgaaaaatgataaatttgactttttaaaagttaaaaatttattgaattcaat 28599754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 450
Target Start/End: Complemental strand, 39567969 - 39567918
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaa 450  Q
    ||||||||||||||||| ||||||||||||||||| | |||| |||||||||    
T  39567969 aaatgatgaaaaatgataaatttaactttttaaaaatcaaaacattgttgaa 39567918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 474
Target Start/End: Complemental strand, 39693068 - 39693001
Alignment:
Q  408 aaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttg 474  Q
    ||||||||| |||||| ||||||||||| ||||| ||||||||| |||||| ||||||  ||||||||    
T  39693068 aaaaatgataaatttatctttttaaaagttaaaatattgttgaaatcaatacaaacatgttacttttg 39693001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 450
Target Start/End: Original strand, 338792 - 338858
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaa 450  Q
    |||||| ||||||| ||||||| |||| |||| ||||||||||||||||| | |||| |||||||||    
T  338792 aaatatgatattgaaaaatgataaaaagtgataaatttaactttttaaaaatcaaaatattgttgaa 338858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 473
Target Start/End: Complemental strand, 2970196 - 2970122
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatactttt 473  Q
    |||| ||||||||||||  |||||| |||||||||| ||||||||||||||||| |||  |||| || |||||||    
T  2970196 aaataatgaaaaatgatagatttaattttttaaaagttaaaaaattgttgaattaaatgcaaacttactactttt 2970122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 434
Target Start/End: Original strand, 43414107 - 43414141
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaa 434  Q
    ||||| |||||||||||||||||||||||||||||    
T  43414107 aaatggtgaaaaatgatcaatttaactttttaaaa 43414141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 457
Target Start/End: Complemental strand, 17606022 - 17605969
Alignment:
Q  405 atgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaata 457  Q
    ||||||||| || |||||||||||||||||| ||||| ||| ||||||||||||    
T  17606022 atgaaaaataatgaatttaactttttaaaagttaaaatattattgaattcaata 17605969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 485
Target Start/End: Complemental strand, 19531837 - 19531756
Alignment:
Q  404 gatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||||| |||| ||||| |||||| |||  ||||||| ||||||||| || | |||| || |||| ||||||||||||||    
T  19531837 gatgaaaagtgattaatttgacttttaaaagttaaaaaagtgttgaattaaagacaaacttactactattggttttcttaac 19531756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 487
Target Start/End: Complemental strand, 678516 - 678428
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaacaa 487  Q
    ||||| |||||| | || |||||||| |||||||||| ||||||||||||||| || | ||||| |  || ||||||||| ||||||||    
T  678516 aaatggtgaaaagtaatgaatttaaccttttaaaagttaaaaaattgttgaatccattgtaaacctgctaattttggtttccttaacaa 678428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 10406870 - 10406766
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttctt 482  Q
    ||||||||| |||||| |||||  ||||| |||| ||||||| ||||||||   |||| |||||||||| ||||  ||| ||  |||||||||||| ||     
T  10406870 agaaatattgtattgaaaaatggagaaaagtgataaatttaattttttaaattcaaaatattgttgaatccaatgcaaaaatgttacttttggtttccta 10406771  T
Q  483 aacaa 487  Q
    |||||    
T  10406770 aacaa 10406766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 454
Target Start/End: Complemental strand, 14640530 - 14640494
Alignment:
Q  418 aatttaactttttaaaagtaaaaaattgttgaattca 454  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  14640530 aattcaactttttaaaagtaaaaaattgttgatttca 14640494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 516 - 584
Target Start/End: Original strand, 37706525 - 37706593
Alignment:
Q  516 ttgataggaaatctaataaagaaattttatcttataaattatacattcatagcattaaaactttaaaaa 584  Q
    |||||| |||||| ||| ||||||| |||||||| ||||| | |||||||  |||| ||||||||||||    
T  37706525 ttgataagaaatccaatgaagaaatcttatcttaaaaattgtgcattcattacattgaaactttaaaaa 37706593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 461
Target Start/End: Original strand, 38610329 - 38610397
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaa 461  Q
    ||||| ||||||| |||| |||  ||||||||||||||||||| |||| ||||||||||| ||| ||||    
T  38610329 attgaaaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaatttaatctaaa 38610397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 129 - 282
Target Start/End: Complemental strand, 38174773 - 38174620
Alignment:
Q  129 agagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaa 228  Q
    ||||||||||||| ||||||| |||||||| | ||| ||||||||||  | ||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  38174773 agagctatgttatttgtacatctaaaattggacaaccaatgcaacaacctttaactttgtgaggagcacagaaatcgaaatcaagcaaaatattattaaa 38174674  T
Q  229 aatagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctct 282  Q
    |||| ||| |  ||| ||||||||||||||| ||||||||| ||| ||||||||    
T  38174673 aatatcaagtaagttattggttgtacaatttggttgttcacgtatcattcctct 38174620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 128 - 281
Target Start/End: Complemental strand, 6494897 - 6494744
Alignment:
Q  128 aagagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaa 227  Q
    |||||||||||||| ||||||| |||||||| | ||| |||||||||| || ||| ||||||| ||||||  ||| | |||||||||||||||| |||||    
T  6494897 aagagctatgttatttgtacatctaaaattggacaaccaatgcaacaacttttaattttgtgaagagcacggaaaacaaaatcatgcaaaatatcattaa 6494798  T
Q  228 aaatagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctc 281  Q
    |||||||||||  ||| ||| ||||||||||| ||||||||||||| |||||||    
T  6494797 aaatagcaaataagttattgattgtacaattttgttgttcacatatcattcctc 6494744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 127 - 282
Target Start/End: Original strand, 45849425 - 45849581
Alignment:
Q  127 aaagagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaa-tcatgcaaaatattatt 225  Q
    ||||||||||||||| ||||||| |||||||  | ||  |||||||||| || |||  |||||||||||||| |||| |||| ||| |||||||||||||    
T  45849425 aaagagctatgttatttgtacatctaaaatttgacaatcaatgcaacaacttttaatgttgtgaggagcacataaattgaaaatcaagcaaaatattatt 45849524  T
Q  226 aaaaatagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctct 282  Q
    |||||||||||||   || ||||||||||||||| ||||||||| ||| ||||||||    
T  45849525 aaaaatagcaaataaattattggttgtacaatttggttgttcacgtatcattcctct 45849581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 474
Target Start/End: Original strand, 30388696 - 30388778
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttg 474  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||| |||| ||| ||||| |||||||||||||| ||||||||    
T  30388696 tattgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaatcaatataaacatactacttttg 30388778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 393 - 491
Target Start/End: Original strand, 4686079 - 4686178
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttcttaacaagtac 491  Q
    |||||| ||||| |||||| |||| |||||||||||||||||| ||||||| |||||||||||| | |||| || ||||| || ||| ||||||||||||    
T  4686079 tattgaaaaatggtgaaaagtgattaatttaactttttaaaagttaaaaaagtgttgaattcaagacaaacttactacttatgatttccttaacaagtac 4686178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 399 - 473
Target Start/End: Complemental strand, 34835931 - 34835856
Alignment:
Q  399 gaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatactttt 473  Q
    |||||||||||||||||  |||||||||||||||||| ||||| |||||| ||||||||||||| ||| |||||||    
T  34835931 gaaatgatgaaaaatgaagaatttaactttttaaaagttaaaatattgttaaattcaatataaatatactactttt 34835856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 455
Target Start/End: Complemental strand, 5543127 - 5543056
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaa 455  Q
    ||||||| |||||||||||| |||||| ||||  |||| |||||||||||| ||||||||||||||||||||    
T  5543127 aaatattgtattgagaaatggtgaaaagtgatatatttgactttttaaaagttaaaaaattgttgaattcaa 5543056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 489
Target Start/End: Complemental strand, 35003687 - 35003582
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaacttttt-aaaagtaaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||||||||||||| ||||| |||||| |||| ||||||||||||| |||| ||||||| ||||||||||||  ||||| || || |||||||||  |    
T  35003687 agaaatattatattga-aaatggtgaaaagtgattaatttaactttttaaaaattaaaaaagtgttgaattcaaagtaaacttacta-ttttggtttcat 35003590  T
Q  482 taacaagt 489  Q
    ||||||||    
T  35003589 taacaagt 35003582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 507
Target Start/End: Original strand, 42552535 - 42552622
Alignment:
Q  421 ttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaacaagtacacttgttagcataatc 507  Q
    |||||||||||||||| |||| |||||| ||||||||  ||||||| |||||||| |||| |||| |||||  |||||||||||||||    
T  42552535 ttaactttttaaaagtcaaaatattgttaaattcaatgcaaacatattacttttgattttgttaataagtatccttgttagcataatc 42552622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 40066943 - 40067000
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaa 440  Q
    |||||||| ||||||| ||||| ||||||||||| ||||||||||||||||| |||||    
T  40066943 agaaatataatattgaaaaatggtgaaaaatgataaatttaactttttaaaaataaaa 40067000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 485
Target Start/End: Complemental strand, 16931939 - 16931871
Alignment:
Q  418 aatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||||||||||| |||| ||||||||||| ||| |||| ||| || ||||||||||||||||    
T  16931939 aatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatactatttttggttttcttaac 16931871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 485
Target Start/End: Complemental strand, 16937322 - 16937254
Alignment:
Q  418 aatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||||||||||| |||| ||||||||||| ||| |||| ||| || ||||||||||||||||    
T  16937322 aatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatactatttttggttttcttaac 16937254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 374 - 441
Target Start/End: Complemental strand, 32204274 - 32204207
Alignment:
Q  374 aatgataaaagaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    ||||| || |||||||||  ||||| |||||||||||| |||| ||||||||||||||||||| ||||    
T  32204274 aatgaaaatagaaatattgcattgaaaaatgatgaaaagtgatgaatttaactttttaaaagttaaaa 32204207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 453
Target Start/End: Original strand, 40774268 - 40774339
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattc 453  Q
    |||||||||  ||||| |||||||||||| |||| |||||||||||||||||| ||||| |||| |||||||    
T  40774268 agaaatattgcattgaaaaatgatgaaaattgatgaatttaactttttaaaagttaaaatattgatgaattc 40774339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 485
Target Start/End: Complemental strand, 42222304 - 42222201
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||  |||||  ||||| |||||| |||| ||||||||||||||||||| |||| |||||||||  ||||| ||||||  ||||||| |||| ||    
T  42222304 agaaatatggtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatacaaacatgttacttttagtttcct 42222205  T
Q  482 taac 485  Q
    ||||    
T  42222204 taac 42222201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 489
Target Start/End: Original strand, 44296928 - 44297034
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||| || |||||| || |||||| |||| ||||||| ||||||||||| |||| || ||||||| |||| ||||| |  |||||||||||| ||    
T  44296928 agaaatattttagtgagaa-tggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttcct 44297026  T
Q  482 taacaagt 489  Q
    ||||||||    
T  44297027 taacaagt 44297034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 485
Target Start/End: Complemental strand, 8380507 - 8380421
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||||||||| |||| ||||||||||||||||||| ||||  ||||||||  ||||  ||||||| ||||||||| || ||||||    
T  8380507 aaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgaaaacatactacttttggcttccttaac 8380421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 485
Target Start/End: Original strand, 27053536 - 27053622
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||| |||||| |||| ||||||||||||||||||| |||| |||||||||  ||||  ||||||  |||||||||||| ||||||    
T  27053536 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacattctacttttggtttccttaac 27053622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 457
Target Start/End: Original strand, 27236852 - 27236910
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaata 457  Q
    |||||||||||||||||  |||| |||| ||||||| ||||||||||||||||||||||    
T  27236852 aaatgatgaaaaatgatagatttgacttcttaaaagttaaaaaattgttgaattcaata 27236910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 41084871 - 41084801
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaac 462  Q
    ||||||||||| ||||||| ||||  ||||||||||||||||| ||||||||| ||||| |||||| ||||    
T  41084871 tattgagaaataatgaaaattgatagatttaactttttaaaagttaaaaaattattgaactcaatacaaac 41084801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 441
Target Start/End: Original strand, 3720116 - 3720198
Alignment:
Q  362 aacattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    ||||||| ||||||||||||||   | ||||||  ||||| ||||| || |||||||| ||||||||||||||||||| ||||    
T  3720116 aacattgattaaaatgataaaaatagtaatattgcattgacaaatggtgtaaaatgataaatttaactttttaaaagttaaaa 3720198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 456
Target Start/End: Complemental strand, 3863123 - 3863051
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaat 456  Q
    ||||||| ||| | |||||||||||||||  | ||||||||||||| |||| |||||||||||||||| ||||    
T  3863123 aaatattgtatcgggaaatgatgaaaaatagtgaatttaacttttttaaagttaaaaaattgttgaatccaat 3863051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 485
Target Start/End: Complemental strand, 49069638 - 49069535
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||  |||||| ||||| |||||| |||| ||| ||||||||||||| | || | |||||||||  ||||| ||||||  |||||||||||| ||    
T  49069638 agaaatatagtattgaaaaatggtgaaaagtgataaatctaactttttaaaaatcaatatattgttgaaaccaatacaaacatgttacttttggtttcct 49069539  T
Q  482 taac 485  Q
    ||||    
T  49069538 taac 49069535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 441
Target Start/End: Original strand, 5240358 - 5240416
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    ||||||||  |||||| ||||| |||||| |||| ||||||||||||||||||| ||||    
T  5240358 agaaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 5240416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 441
Target Start/End: Original strand, 5347998 - 5348056
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||||| | ||||  |||||||||||| |||| ||||||||||||||||||| ||||    
T  5347998 agaaatataacattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaa 5348056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 477
Target Start/End: Complemental strand, 16957711 - 16957653
Alignment:
Q  420 tttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggtt 477  Q
    ||||||||||||||||| |||| ||||||||||| ||| |||| ||| |||||||||||    
T  16957711 tttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatattacttttggtt 16957653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 487
Target Start/End: Original strand, 35404307 - 35404385
Alignment:
Q  410 aaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttcttaacaa 487  Q
    ||||||| |||||||||||||||||| ||||| || |||||||  ||| ||||| || |||||||| ||| ||||||||    
T  35404307 aaatgatgaatttaactttttaaaagttaaaatatcgttgaatctaatgtaaacctactacttttgatttccttaacaa 35404385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 40763332 - 40763274
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||||| | ||||| ||||| |||||| |||| ||||||||||||||||||| ||||    
T  40763332 agaaatataacattgaaaaatggtgaaaagtgataaatttaactttttaaaagttaaaa 40763274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 505
Target Start/End: Complemental strand, 44391053 - 44390955
Alignment:
Q  408 aaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaacaagtacacttgttagcataa 505  Q
    |||||| || ||||| ||||||||||||| |||| |||  ||||||| ||| ||||  | ||||||||||||  |||||||| ||||||||||| ||||    
T  44391053 aaaaattatgaatttgactttttaaaagttaaaatattactgaattctatacaaaccaagtacttttggtttctttaacaaggacacttgttaggataa 44390955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 441
Target Start/End: Original strand, 48454848 - 48454906
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||||| | |||| |||||| |||||| |||| ||||||||||||||||||| ||||    
T  48454848 agaaatataacattgggaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 48454906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 485
Target Start/End: Complemental strand, 48879744 - 48879650
Alignment:
Q  392 atattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||| |||||  |||||| |||  ||||||| ||||||||||| |||| ||||||||||| ||| |||| ||  |||||||| ||||||||||    
T  48879744 atattgggaaatagtgaaaagtgaagaatttaattttttaaaagttaaaatattgttgaatttaatgtaaatatgctacttttgattttcttaac 48879650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 441
Target Start/End: Complemental strand, 1910310 - 1910269
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||    
T  1910310 aaatggtgaaaaatgataaatttaactttttaaaagttaaaa 1910269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 474
Target Start/End: Complemental strand, 6548590 - 6548521
Alignment:
Q  406 tgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttg 474  Q
    ||||||||||| |||||||||||||||||| ||||| ||||||| || ||||  |||| || ||||||||    
T  6548590 tgaaaaatgatgaatttaactttttaaaagttaaaatattgttggatccaatgcaaacttactacttttg 6548521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 457
Target Start/End: Original strand, 14718166 - 14718219
Alignment:
Q  405 atgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaata 457  Q
    ||||||||| || |||||||||||||||||| ||||| ||| ||||||||||||    
T  14718166 atgaaaaataatgaatttaactttttaaaagttaaaatattattgaattcaata 14718219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 434
Target Start/End: Original strand, 31626069 - 31626118
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaa 434  Q
    |||||| ||||| | |||||||||||| |||| |||||||||||||||||    
T  31626069 aaatataatattaaaaaatgatgaaaagtgataaatttaactttttaaaa 31626118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 487
Target Start/End: Original strand, 21577681 - 21577773
Alignment:
Q  395 ttgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttcttaacaa 487  Q
    |||| ||||| ||||||||||  |||||||||||||||||||  |||||||| |  | |||| ||||  || || ||||| ||||||||||||    
T  21577681 ttgaaaaatggtgaaaaatgaataatttaactttttaaaagtttaaaattgtagtttccaatgtaaaactagtatttttgattttcttaacaa 21577773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 449
Target Start/End: Complemental strand, 40335053 - 40335005
Alignment:
Q  401 aatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttga 449  Q
    |||||| |||| |||| |||||||||||||||||| |||||||| ||||    
T  40335053 aatgataaaaagtgatgaatttaactttttaaaagaaaaaaattattga 40335005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 489
Target Start/End: Complemental strand, 41141072 - 41141000
Alignment:
Q  418 aatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaacaagt 489  Q
    ||||||||||||||||| | ||||||||||||| |||||||  ||| || || |||| |||| ||||||||||    
T  41141072 aatttaactttttaaaaatcaaaaaattgttgatttcaataacaacctattattttttgtttccttaacaagt 41141000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 486
Target Start/End: Original strand, 44260529 - 44260632
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||| ||||| |||| |||||||| |||||||| ||||||| ||||||||||  ||||  || ||||||| |||  ||||||| || ||||||||| ||    
T  44260529 agaaagattatgttgaaaaatgatg-aaaatgatgaatttaattttttaaaagccaaaatgttattgaatttaatgcaaacatactaattttggtttcct 44260627  T
Q  482 taaca 486  Q
    |||||    
T  44260628 taaca 44260632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 130 - 282
Target Start/End: Complemental strand, 33538327 - 33538175
Alignment:
Q  130 gagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaa 229  Q
    |||||||||||| |||||||||||||||| | ||| ||||||| ||||| ||| ||||||||||| ||  ||||| |||||||||||||||| |||||||    
T  33538327 gagctatgttatttgtacatttaaaattggacaaccaatgcaataatttttaattttgtgaggagtacggaaatcaaaatcatgcaaaatatcattaaaa 33538228  T
Q  230 atagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctct 282  Q
    |||| ||||  |||||||||||||||||||  || ||||||||| ||||||||    
T  33538227 atagtaaataagttgttggttgtacaatttgatttttcacatatcattcctct 33538175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 363 - 489
Target Start/End: Complemental strand, 2239688 - 2239558
Alignment:
Q  363 acattggttaaaatgataaa---agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatat 458  Q
    ||||||||||| | ||||||   |||||||||  | ||| ||||| | ||||||||| ||||||||||||||||||| |||| |||||||||| |||||     
T  2239688 acattggttaagaggataaagatagaaatattgcaatgaaaaatggtaaaaaatgatgaatttaactttttaaaagttaaaatattgttgaatccaatac 2239589  T
Q  459 aaacataatacttttggttttcttaacaagt 489  Q
    ||| ||| |||||||||| ||||||||||||    
T  2239588 aaatatactacttttggtattcttaacaagt 2239558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 485
Target Start/End: Complemental strand, 33849122 - 33848966
Alignment:
Q  333 ttaagaaaaatgttaaatagtgtctgtgaaacattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttt 429  Q
    ||||| ||||||||||| ||| | | | | |||||| |||| |||||||||   |||| |||||||||| ||||| |||||||  |  ||||||||||||    
T  33849122 ttaaggaaaatgttaaagagtattttttagacattgattaagatgataaaaatagaaacattatattgataaatggtgaaaaaccaagaatttaactttt 33849023  T
Q  430 taaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||| |||  ||||||||||| |||||||| ||| |||||||||||| ||||||    
T  33849022 taaaagtcaaaccattgttgaatttaatataaatatattacttttggtttccttaac 33848966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 464
Target Start/End: Original strand, 9965089 - 9965161
Alignment:
Q  391 tatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacat 464  Q
    |||||||||||||| |||||||| || |||||||||||||||||||  ||||||||||| |||||||| |||||    
T  9965089 tatattgagaaatggtgaaaaattatgaatttaactttttaaaagt-caaaattgttgatttcaatatcaacat 9965161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 3454724 - 3454815
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttg 474  Q
    |||||||||||||| | | ||| | |||| |||| | ||||||||||||||||||||| |||||||||||||||| |||  || ||||||||    
T  3454724 agaaatattatattaaaagatggtaaaaagtgataactttaactttttaaaagtaaaatattgttgaattcaatacaaaattactacttttg 3454815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 385 - 485
Target Start/End: Complemental strand, 11659343 - 11659242
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttctta 483  Q
    ||||||| |||||| ||||  |||||| |||  ||||||||||||||||| | |||| ||||||||||||||| |||| ||| | |||||||||| ||||    
T  11659343 aaatattgtattgaaaaatagtgaaaagtgaagaatttaactttttaaaaattaaaatattgttgaattcaatgtaaatatactgcttttggtttcctta 11659244  T
Q  484 ac 485  Q
    ||    
T  11659243 ac 11659242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 485
Target Start/End: Complemental strand, 1729567 - 1729465
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttctt 482  Q
    |||||| || |||||| ||||| |||||||||||  |||| |||||  |||  |||||||||||||||||||||| || | ||||| |||| |||| |||    
T  1729567 agaaatgttgtattgaaaaatggtgaaaaatgatagatttgactttgaaaagttaaaaaattgttgaattcaatacaagcttaatatttttagtttcctt 1729468  T
Q  483 aac 485  Q
    |||    
T  1729467 aac 1729465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 485
Target Start/End: Complemental strand, 34512712 - 34512626
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||| |||||| ||||  |||| ||||||||||||| ||||||||||| ||||||||| |||| || || |||| |||||||||||    
T  34512712 aaatggtgaaaagtgatagatttgactttttaaaagttaaaaaattgttaaattcaatacaaacttactatttttagttttcttaac 34512626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 485
Target Start/End: Complemental strand, 33726453 - 33726360
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||| ||||| |||||||| || ||||||||||| |||||| ||||| ||||||||| |||||| ||||||  || ||||| ||| ||||||    
T  33726453 tattgaaaaatggtgaaaaataataaatttaactttctaaaagttaaaatattgttgaaatcaatacaaacatgctatttttgatttccttaac 33726360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 486
Target Start/End: Original strand, 34392603 - 34392678
Alignment:
Q  408 aaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttcttaaca 486  Q
    ||||||||  ||||||| ||||||||||| ||||   |||||||||||| |||| ||| |||||||||||| |||||||    
T  34392603 aaaaatgaagaatttaattttttaaaagtcaaaa---gttgaattcaatgtaaatatactacttttggtttccttaaca 34392678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 441
Target Start/End: Original strand, 43140351 - 43140407
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||| | ||||| |||||| |||||||||| ||||||||||||||||| ||||||    
T  43140351 aaatataacattgaaaaatgacgaaaaatgataaatttaactttttaaaattaaaaa 43140407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 456
Target Start/End: Original strand, 747540 - 747591
Alignment:
Q  406 tgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaat 456  Q
    |||||| ||||  ||||||||||||||||| |||||||||||||||||||||    
T  747540 tgaaaagtgatagatttaactttttaaaagttaaaaaattgttgaattcaat 747591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 485
Target Start/End: Complemental strand, 6999285 - 6999182
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||  |||||  ||||| ||||||||||| ||||||||||||||||||| ||||  ||||||||  ||||  ||||||  ||||||||| || ||    
T  6999285 agaaatatagtattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttcct 6999186  T
Q  482 taac 485  Q
    ||||    
T  6999185 taac 6999182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 464
Target Start/End: Original strand, 13997953 - 13998012
Alignment:
Q  406 tgaaaaatgatcaatttaacttttt-aaaagtaaaaaattgttgaattcaatataaacat 464  Q
    ||||||||||| ||||||||||||| |||| ||||| ||||||||| |||||| ||||||    
T  13997953 tgaaaaatgataaatttaactttttaaaaattaaaatattgttgaaatcaatacaaacat 13998012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 441
Target Start/End: Complemental strand, 17603883 - 17603836
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||| ||||    
T  17603883 attgaaaaatgataaaaaatgataaatttaactttttaaaagtcaaaa 17603836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 39401561 - 39401663
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||||| | ||||| ||||| |||||| |||| ||||||||||||||||||| ||||  ||||||||  ||||| ||||||  ||||||||| || ||    
T  39401561 agaaatataacattgaaaaatggtgaaaagtgat-aatttaactttttaaaagtcaaaattttgttgaaaccaatacaaacatgctacttttggcttcct 39401659  T
Q  482 taac 485  Q
    ||||    
T  39401660 taac 39401663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 30831701 - 30831643
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||||||  ||| | |||| || ||||||||| ||||||||||||||||||||||||    
T  30831701 agaaatattgcattaaaaaattataaaaaatgatgaatttaactttttaaaagtaaaaa 30831643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 474
Target Start/End: Original strand, 10900276 - 10900368
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttg 474  Q
    |||||||| | ||||| ||||||| |||| |||| ||||| | |||||||||| ||||| ||| ||||||||||| |||| ||| || |||||    
T  10900276 agaaatatcacattgaaaaatgataaaaagtgatgaattttattttttaaaagttaaaatattattgaattcaatgtaaatatactatttttg 10900368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 474
Target Start/End: Complemental strand, 15004990 - 15004918
Alignment:
Q  403 tgatgaaaaatgatcaatttaacttttt-aaaagtaaaaaattgttgaattcaatataaacataatacttttg 474  Q
    ||||||||| |||| ||||||||||||| |||| |||||  ||||||||  ||||| |||||| |||||||||    
T  15004990 tgatgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaaacatgatacttttg 15004918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 419 - 462
Target Start/End: Complemental strand, 19851719 - 19851675
Alignment:
Q  419 atttaactttttaaaagt-aaaaaattgttgaattcaatataaac 462  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||    
T  19851719 atttgactttttaaaagttaaaaaattgttgaattcaatacaaac 19851675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 31167660 - 31167624
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagt 436  Q
    |||||||||||| |||| |||||||||||||||||||    
T  31167660 aaatgatgaaaattgatgaatttaactttttaaaagt 31167624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 419 - 478
Target Start/End: Original strand, 40798385 - 40798445
Alignment:
Q  419 atttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttt 478  Q
    |||||||||||||||||| |||| ||||||||||||||| |||  |||  |||||||||||    
T  40798385 atttaactttttaaaagtcaaaacattgttgaattcaatgtaagtataccacttttggttt 40798445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 41436551 - 41436503
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||| |||||||||||| |||| || |||||||||||||||| ||||    
T  41436551 tattgaaaaatgatgaaaagtgataaacttaactttttaaaagtcaaaa 41436503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 434
Target Start/End: Complemental strand, 44173191 - 44173151
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaactttttaaaa 434  Q
    ||||| ||||||||||||||||| ||||||| |||||||||    
T  44173191 attgaaaaatgatgaaaaatgataaatttaattttttaaaa 44173151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 128 - 281
Target Start/End: Original strand, 26847675 - 26847828
Alignment:
Q  128 aagagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaa 227  Q
    |||||||||||||| ||||||| |||||||  | ||| ||||||| || || ||| ||||||||||||||  ||| | |||||||||||||||| |||||    
T  26847675 aagagctatgttatttgtacatctaaaattagacaaccaatgcaataacttttaattttgtgaggagcacggaaaacaaaatcatgcaaaatatcattaa 26847774  T
Q  228 aaatagcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctc 281  Q
    |||||||||||  |||||||||||||||||||  |||||||||||| |||||||    
T  26847775 aaatagcaaataagttgttggttgtacaatttgattgttcacatatcattcctc 26847828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 133 - 282
Target Start/End: Complemental strand, 40034876 - 40034727
Alignment:
Q  133 ctatgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaaata 232  Q
    ||||||||| |||||||||||||||| | ||| |||||||||| || ||| ||| ||||||||||  ||||  |||||||| ||||||||||||||||||    
T  40034876 ctatgttatttgtacatttaaaattggacaaccaatgcaacaacttttaattttatgaggagcacggaaattaaaatcatgtaaaatattattaaaaata 40034777  T
Q  233 gcaaatgtgttgttggttgtacaatttagttgttcacatatgattcctct 282  Q
      ||||  |||||||||||||||||||   ||||||||||| ||| ||||    
T  40034776 ataaataagttgttggttgtacaatttgaatgttcacatatcatttctct 40034727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 141 - 282
Target Start/End: Complemental strand, 2043874 - 2043731
Alignment:
Q  141 tatgtacatttaaaattgaaaaacaaatgcaaca--atttataactttgtgaggagcacaaaaatcgaaatcatgcaaaatattattaaaaatagcaaat 238  Q
    ||||||||| |||||||| | ||  |||||||||  | || ||||||||| ||||||||| ||||||||||||  |||||||| |||||| |||||||||    
T  2043874 tatgtacatctaaaattggacaatcaatgcaacacaacttttaactttgtaaggagcacataaatcgaaatcaatcaaaatatcattaaagatagcaaat 2043775  T
Q  239 gtgttgttggttgtacaatttagttgttcacatatgattcctct 282  Q
      ||||||||||||||||||||||| || |||||| ||||||||    
T  2043774 aagttgttggttgtacaatttagttatttacatatcattcctct 2043731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 383 - 484
Target Start/End: Original strand, 45899569 - 45899672
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaa-tgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttc 480  Q
    |||||||||||||||  ||||||||||||| |||| ||||||| ||||||||||| |||| ||||||||||||||| |||||||| |||||||||||| |    
T  45899569 agaaatattatattggaaaatgatgaaaaagtgatgaatttaaatttttaaaagtcaaaatattgttgaattcaatgtaaacatactacttttggtttcc 45899668  T
Q  481 ttaa 484  Q
    ||||    
T  45899669 ttaa 45899672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 385 - 489
Target Start/End: Original strand, 34060794 - 34060899
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttctta 483  Q
    ||||||| |||||| ||||| |||||| |||| |||||||||||||||||| ||||| |||||||||||||||  ||||| | |||||||  ||| ||||    
T  34060794 aaatattgtattgaaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacaaactacttttaatttcctta 34060893  T
Q  484 acaagt 489  Q
    ||||||    
T  34060894 acaagt 34060899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 338 - 478
Target Start/End: Original strand, 13647014 - 13647161
Alignment:
Q  338 aaaaatgttaaatagtgtctgtgaaacattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaacttttta--- 431  Q
    |||||||||||| | || || |||| |||| ||||| | |||||||   ||||||||  ||||| ||||  |||||| |||| ||||||||||||||       
T  13647014 aaaaatgttaaagattgcctttgaagcatttgttaagaggataaaaatagaaatattggattgaaaaatagtgaaaagtgatgaatttaactttttacta 13647113  T
Q  432 -aaagtaaaaaattgttgaattcaatataaacataatacttttggttt 478  Q
     ||| ||||| ||||||||||||||||||||| || ||||||||||||    
T  13647114 aaaattaaaacattgttgaattcaatataaacctactacttttggttt 13647161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 385 - 489
Target Start/End: Original strand, 4542381 - 4542486
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttctta 483  Q
    ||||||| |||| | | ||||||||||||||| ||||| |||||||||||| | ||| |||||||||| ||||  |||| || || ||||||||||||||    
T  4542381 aaatattgtattaaaagatgatgaaaaatgatgaatttgactttttaaaagtttaaatattgttgaatccaatggaaacctactatttttggttttctta 4542480  T
Q  484 acaagt 489  Q
     |||||    
T  4542481 gcaagt 4542486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 485
Target Start/End: Original strand, 51256137 - 51256202
Alignment:
Q  421 ttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||  ||||||||||| ||||||    
T  51256137 ttaactttttaaaagtcaaaacattgttgaattcaatataaatataccacttttggtttccttaac 51256202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 3304970 - 3305061
Alignment:
Q  398 agaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttcttaacaagt 489  Q
    ||||||||||||||||||| ||||||| ||||||||| |  |||  | || ||||||||||||| ||| ||||| || ||| ||||||||||    
T  3304970 agaaatgatgaaaaatgatgaatttaattttttaaaaattgaaatattttaaattcaatataaatatactacttatgatttccttaacaagt 3305061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 485
Target Start/End: Original strand, 8847478 - 8847581
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||||| | ||||  ||||| | |||| |||| |||||||||||||||||| ||||| |||||||||  |||| |||||||  |||||||||||| ||    
T  8847478 agaaatataacattggaaaatggtaaaaagtgattaatttaactttttaaaagttaaaatattgttgaaaacaatgtaaacatgctacttttggtttcct 8847577  T
Q  482 taac 485  Q
    ||||    
T  8847578 taac 8847581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 29213393 - 29213460
Alignment:
Q  390 ttatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaat 456  Q
    ||||||||| ||||| |||||||||||  |||| |||||||||||| |||||||||| ||||||||||    
T  29213393 ttatattgaaaaatggtgaaaaatgatagatttgactttttaaaagttaaaaaattgctgaattcaat 29213460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 485
Target Start/End: Complemental strand, 46317569 - 46317466
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||||| | ||||  ||||||||||||||||| ||||||||||||||||||| ||||  ||||||||  ||||  ||||||  ||||||||| || ||    
T  46317569 agaaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggcttcct 46317470  T
Q  482 taac 485  Q
    ||||    
T  46317469 taac 46317466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 12060085 - 12060159
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaat 456  Q
    ||||||||| |||||  |||||||||||| ||||  |||| | |||||||||| |||||||||||||||||||||    
T  12060085 agaaatattgtattggaaaatgatgaaaagtgatagatttgagtttttaaaagttaaaaaattgttgaattcaat 12060159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 484
Target Start/End: Complemental strand, 35306415 - 35306313
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||||| | ||||  |||||||||||| |||| |||||||||||||||||| |||||  || ||||| |||||  ||||||  |||||||||||| ||    
T  35306415 agaaatataacattggaaaatgatgaaaagtgataaatttaactttttaaaagttaaaatgttattgaaatcaatgcaaacatgctacttttggtttcct 35306316  T
Q  482 taa 484  Q
    |||    
T  35306315 taa 35306313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 478
Target Start/End: Original strand, 271176 - 271288
Alignment:
Q  364 cattggttaaaatgataaaagaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaac 462  Q
    |||||||||| |||||||||   |||||| ||||  ||| ||| |||||| || ||||| |||||||||||| ||||| |||||||||| ||||| ||||    
T  271176 cattggttaagatgataaaa---atattacattggaaaacgataaaaaataatgaatttgactttttaaaagttaaaacattgttgaatccaatacaaac 271272  T
Q  463 ataatacttttggttt 478  Q
     |  ||||||||||||    
T  271273 tttctacttttggttt 271288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 8914002 - 8913926
Alignment:
Q  135 atgttatatgtacatttaaaattgaaaaacaaatgcaacaatttataactttgtgaggagcacaaaaatcgaaatca 211  Q
    ||||||| |||||| | ||||||||| ||| ||||||||||  | |||  |||||||||||||| ||||||||||||    
T  8914002 atgttatttgtacaatcaaaattgaacaactaatgcaacaacctttaatattgtgaggagcacacaaatcgaaatca 8913926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 51877348 - 51877268
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaa-aaaattgttgaattcaatataaac 462  Q
    ||||||||| |||| ||||||| |||||| ||||  |||| | ||||||||||||| ||||||| ||||||||||| ||||    
T  51877348 agaaatattgtattcagaaatggtgaaaagtgatatatttgattttttaaaagtaaaaaaattgctgaattcaatacaaac 51877268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 489
Target Start/End: Complemental strand, 21324583 - 21324492
Alignment:
Q  399 gaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttcttaacaagt 489  Q
    ||||||||||||| ||||  ||||||||||||||||| ||||| |||||||||| | ||  || |||| ||||||| ||||  |||||||||    
T  21324583 gaaatgatgaaaagtgatagatttaactttttaaaagttaaaatattgttgaatccgatgcaatcatattacttttagtttctttaacaagt 21324492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 30075024 - 30074974
Alignment:
Q  125 taaaagagctatgttatatgtacatttaaaattgaaaaacaaatgcaacaa 175  Q
    ||||||||||||||||| ||||||| |||||||| | ||| ||||||||||    
T  30075024 taaaagagctatgttatttgtacatctaaaattggacaaccaatgcaacaa 30074974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 456
Target Start/End: Complemental strand, 50420731 - 50420693
Alignment:
Q  419 atttaactttttaaaagt-aaaaaattgttgaattcaat 456  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  50420731 atttaactttttaaaagttaaaaaattgttgaattcaat 50420693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 485
Target Start/End: Original strand, 51817355 - 51817441
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||| |||||| |||| ||||||||||||||||||| |||| |||||||||   |||| ||||||  ||||||||| || ||||||    
T  51817355 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaactaatacaaacatgctacttttggcttccttaac 51817441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 485
Target Start/End: Original strand, 36730189 - 36730282
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||| ||||| |||||| |||| ||||||||||||||||||| ||||  ||||||||  ||||  ||||||  ||||||||| || ||||||    
T  36730189 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaac 36730282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Complemental strand, 39436548 - 39436495
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt 436  Q
    ||||||||| |||||| ||||| |||||||| |  |||||||||||||||||||    
T  39436548 agaaatattgtattgaaaaatggtgaaaaataaagaatttaactttttaaaagt 39436495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 489
Target Start/End: Complemental strand, 11675394 - 11675289
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||| |||||| ||||| |  |||||||  |||||||||||||||| || |||| |||||||||| ||||   ||| ||  ||||||||||| ||    
T  11675394 agaaatattgtattgaaaaatggt--aaaatgacgaatttaactttttaaatgtcaaaatattgttgaatccaatgctaacctaccacttttggtttcct 11675297  T
Q  482 taacaagt 489  Q
    ||||||||    
T  11675296 taacaagt 11675289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 485
Target Start/End: Complemental strand, 31647364 - 31647284
Alignment:
Q  406 tgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||| ||||||||||||||||||| ||||  || ||||| |||||  ||||||  ||||||||| || ||||||    
T  31647364 tgaaaaatgataaatttaactttttaaaagtcaaaatgttattgaaatcaatgcaaacatgctacttttggcttccttaac 31647284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 44695714 - 44695790
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaacttttt-aaaagtaaaaaattgttgaattcaatataaacataatacttttgg 475  Q
    ||||| ||||||||||| ||||||||||||| |||| |||||  |||||||| |||||  ||||||  |||||||||    
T  44695714 aaatggtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaatcaatgcaaacatgttacttttgg 44695790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 478
Target Start/End: Complemental strand, 46365319 - 46365223
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttt 478  Q
    ||||||||| |||||||||||| | |||  || | |||| ||||||||||||| | |||||||||||| | |||  ||||| || ||||||||||||    
T  46365319 agaaatattgtattgagaaatggtaaaacgtggtgaattgaactttttaaaagcttaaaaattgttgattccaacgtaaacctactacttttggttt 46365223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 4e-24; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 393 - 485
Target Start/End: Original strand, 11295500 - 11295593
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||| | |||||||||||||||||| ||| || ||||||||| ||||||    
T  11295500 tattgagaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaacaatgttgaattcaatataaatatactaattttggtttccttaac 11295593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 502
Target Start/End: Original strand, 39972178 - 39972298
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttct 481  Q
    |||||| || ||||| |||||| |||||| |||| ||||| ||||||||||||| ||||||||||| ||||||||  ||||||| || ||||||||| ||    
T  39972178 agaaatgttgtattgggaaatggtgaaaagtgatgaatttgactttttaaaagttaaaaaattgttcaattcaatgcaaacatactatttttggtttcct 39972277  T
Q  482 taacaagtacacttgttagca 502  Q
    |||| ||| | ||||||||||    
T  39972278 taactagtgcccttgttagca 39972298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 383 - 471
Target Start/End: Original strand, 11332820 - 11332909
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatactt 471  Q
    ||||||||| |||||||||||| || ||| |||  ||||||||||||||||||| |||| |||||||||||||||||||| ||| |||||    
T  11332820 agaaatattgtattgagaaatggtgtaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaatataaatatactactt 11332909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 37819879 - 37819952
Alignment:
Q  200 aaatcgaaatcatgcaaaatattattaaaaatagcaaatgtgttgttggttgtacaatttagttgttcacatat 273  Q
    ||||||||||||   |||||||||||||| |||||||||   ||||||||||||||||||||||||||| ||||    
T  37819879 aaatcgaaatcagataaaatattattaaacatagcaaataaattgttggttgtacaatttagttgttcaaatat 37819952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 4308887 - 4308783
Alignment:
Q  388 tattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttcttaaca 486  Q
    |||||| |||| ||||| | ||||||||| ||||||||||| |||||| ||||| | |||||||| ||||| |||| || || ||||||||| |||||||    
T  4308887 tattatgttgaaaaatggtaaaaaatgatgaatttaactttataaaagttaaaatagtgttgaatccaatacaaacctactatttttggtttccttaaca 4308788  T
Q  487 agtac 491  Q
    |||||    
T  4308787 agtac 4308783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 489
Target Start/End: Original strand, 20212416 - 20212522
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttct 481  Q
    ||||||||| || |||||| || |||||| |||| ||||||| ||||||||||| |||| || ||||||| |||| ||||| |  |||||||||||| ||    
T  20212416 agaaatattttagtgagaa-tggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttcct 20212514  T
Q  482 taacaagt 489  Q
    ||||||||    
T  20212515 taacaagt 20212522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 479
Target Start/End: Complemental strand, 24305047 - 24304928
Alignment:
Q  363 acattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatata 459  Q
    |||||| |||| |||||||||   |||||||| |||||| ||| | |||||| |||  |||||||||||| || |  ||||  |||||||||||||| ||    
T  24305047 acattgattaagatgataaaaatggaaatattgtattgaaaaacggtgaaaagtgaagaatttaacttttaaagatcaaaattttgttgaattcaatgta 24304948  T
Q  460 aacataatacttttggtttt 479  Q
    || ||| |||||||||||||    
T  24304947 aatatactacttttggtttt 24304928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 489
Target Start/End: Complemental strand, 5300263 - 5300199
Alignment:
Q  426 tttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaacaagt 489  Q
    ||||||||||| |||| |||||||||||||||  |||| || |||||||||||| ||||||||||    
T  5300263 tttttaaaagtcaaaatattgttgaattcaatgcaaacttactacttttggtttccttaacaagt 5300199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 7532868 - 7532765
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttctt 482  Q
    ||||||||| |||||  ||||| |||||| |||| ||||||  ||||||||||| || | ||||||||| ||||  |||| || |||||||||||| |||    
T  7532868 agaaatattgtattggaaaatggtgaaaagtgatgaatttaggtttttaaaagttaata-ttgttgaatccaattcaaacctactacttttggtttcctt 7532770  T
Q  483 aacaa 487  Q
    |||||    
T  7532769 aacaa 7532765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 26892869 - 26892777
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttg 474  Q
    |||||||| ||||||| ||||  | ||||||||| |||||||||||||||||| ||||| ||| |||||   |||||||||||| || |||||    
T  26892869 agaaatataatattgaaaaattgtaaaaaatgataaatttaactttttaaaagttaaaatattattgaaactaatataaacatactaattttg 26892777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 485
Target Start/End: Original strand, 31596424 - 31596549
Alignment:
Q  363 acattggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatat 458  Q
    |||||| |||| |||||||||   |||||||| | || | ||||| ||||||||||| ||||| ||||||||||||| |||| |||||| |||  | |||    
T  31596424 acattgattaagatgataaaaatagaaatattgtgttaaaaaatggtgaaaaatgatgaattttactttttaaaagtcaaaatattgttaaatctattat 31596523  T
Q  459 aaacataatacttttggttttcttaac 485  Q
    | | ||| |||||||||||||||||||    
T  31596524 ata-atactacttttggttttcttaac 31596549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 24512016 - 24511973
Alignment:
Q  241 gttgttggttgtacaatttagttgttcacatatgattcctcttt 284  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||    
T  24512016 gttgttggttgtacaatttggttgttcagatatcattcctcttt 24511973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 473
Target Start/End: Complemental strand, 37433337 - 37433258
Alignment:
Q  394 attgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatactttt 473  Q
    ||||| |||||||||||| |||| ||||||||||||||||  |||||  ||||||||  ||||  ||||||| |||||||    
T  37433337 attgaaaaatgatgaaaagtgataaatttaactttttaaagttaaaatgttgttgaaaccaatgcaaacatactactttt 37433258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 478
Target Start/End: Complemental strand, 38870070 - 38869991
Alignment:
Q  400 aaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttt 478  Q
    |||||||||||| |||  |||| ||| |||||||||| |||| |||| |||||||||| |||| ||| ||||||||||||    
T  38870070 aaatgatgaaaagtgaagaattcaacattttaaaagtcaaaatattgatgaattcaatgtaaatatactacttttggttt 38869991  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 434
Target Start/End: Complemental strand, 45338087 - 45338036
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaa 434  Q
    |||||||| | ||||| ||||| ||||||||||| |||||||||||||||||    
T  45338087 agaaatataacattgaaaaatggtgaaaaatgataaatttaactttttaaaa 45338036  T

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Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 3174543 - 3174485
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||||||||||||  ||||| |||||||| || ||||| ||||||||||||| ||||    
T  3174543 agaaatattatattggaaaatggtgaaaaattataaatttgactttttaaaagtcaaaa 3174485  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 505
Target Start/End: Complemental strand, 20169343 - 20169245
Alignment:
Q  408 aaaaatgatcaatttaactttttaaaagtaaaaa-attgttgaattcaatataaacataatacttttggttttcttaacaagtacacttgttagcataa 505  Q
    |||||| || ||||| ||||||||||||| |||| |||  ||||||| ||| ||||  | ||||||||||||  |||||||| ||||||||||| ||||    
T  20169343 aaaaattatgaatttgactttttaaaagttaaaatattactgaattctatacaaaccaagtacttttggtttctttaacaaggacacttgttaggataa 20169245  T

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Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 21016317 - 21016259
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaa 441  Q
    |||||||| ||||||| ||||| |||||| ||||  |||||||||||||||||| ||||    
T  21016317 agaaatataatattgaaaaatggtgaaaagtgatagatttaactttttaaaagtcaaaa 21016259  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 457
Target Start/End: Original strand, 34421323 - 34421419
Alignment:
Q  365 attggttaaaatgataaaa---gaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaata 457  Q
    ||||||||| |||||||||   |||| ||| ||||  |||||| ||||||||||  |||| |||||||||||| | |||| ||||||||||||||||    
T  34421323 attggttaagatgataaaaatagaaacattgtatttggaaatggtgaaaaatgaaaaattcaactttttaaaaatcaaaacattgttgaattcaata 34421419  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 487
Target Start/End: Original strand, 35973925 - 35974007
Alignment:
Q  406 tgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaattcaatataaacataatacttttggttttcttaacaa 487  Q
    ||||||||||| ||||||| |||||||||| ||||| |||||||||||  ||| |||| || || |||||||||  |||||||    
T  35973925 tgaaaaatgataaatttaattttttaaaagataaaatattgttgaatttcatacaaacttattatttttggtttcattaacaa 35974007  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 450
Target Start/End: Original strand, 40550405 - 40550471
Alignment:
Q  385 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaa 450  Q
    ||||||| |||| ||||||||||||||||  | ||||||| |||||||||| ||||| |||||||||    
T  40550405 aaatattgtattaagaaatgatgaaaaatagtgaatttaaatttttaaaagataaaatattgttgaa 40550471  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 450
Target Start/End: Original strand, 33741523 - 33741568
Alignment:
Q  406 tgaaaaatgatcaatttaactttttaaaag-taaaaaattgttgaa 450  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||    
T  33741523 tgaaaaatgataaatttaactttttaaaagttaaaatattgttgaa 33741568  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 35930209 - 35930168
Alignment:
Q  393 tattgagaaatgatgaaaaatgatcaatttaactttttaaaa 434  Q
    |||||| |||||||||||||| || |||||||||||||||||    
T  35930209 tattgaaaaatgatgaaaaataataaatttaactttttaaaa 35930168  T

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Target: scaffold0144 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 485
Target Start/End: Complemental strand, 39635 - 39569
Alignment:
Q  418 aatttaactttttaaaagtaaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||||||||||| || | |||||||||||||| |||| ||| |||||||||||| ||||||    
T  39635 aatttaactttttaaaagtcaaca-ttgttgaattcaatgtaaatatactacttttggtttccttaac 39569  T

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Target: scaffold0064 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 447
Target Start/End: Original strand, 16593 - 16657
Alignment:
Q  383 agaaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaagtaaaaaattgtt 447  Q
    |||||||||| ||| | |||||| |||||||||| ||||| ||||||||||  ||||||||||||    
T  16593 agaaatattacattaaaaaatgaagaaaaatgataaatttgactttttaaagttaaaaaattgtt 16657  T

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Target: scaffold0062 (Bit Score: 29; Significance: 0.0000008; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 16820 - 16900
Alignment:
Q  406 tgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||| ||| ||||||||||||||| |||| |||||||||  ||||  ||||||  ||||||||| || ||||||    
T  16820 tgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaac 16900  T

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Target: scaffold0062; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 26988 - 27068
Alignment:
Q  406 tgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||| ||| ||||||||||||||| |||| |||||||||  ||||  ||||||  ||||||||| || ||||||    
T  26988 tgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaac 27068  T

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Target: scaffold0062; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 485
Target Start/End: Original strand, 37154 - 37234
Alignment:
Q  406 tgaaaaatgatcaatttaactttttaaaagt-aaaaaattgttgaattcaatataaacataatacttttggttttcttaac 485  Q
    ||||||||||| ||| ||||||||||||||| |||| |||||||||  ||||  ||||||  ||||||||| || ||||||    
T  37154 tgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaac 37234  T

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