View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13601_low_3 (Length: 464)

Name: NF13601_low_3
Description: NF13601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13601_low_3
NF13601_low_3
[»] chr7 (19 HSPs)
chr7 (233-452)||(37714944-37715163)
chr7 (1-208)||(34738414-34738622)
chr7 (58-208)||(17835185-17835334)
chr7 (1-202)||(15074048-15074251)
chr7 (1-202)||(42507847-42508050)
chr7 (12-206)||(27453436-27453632)
chr7 (1-206)||(47776382-47776589)
chr7 (82-206)||(39460660-39460784)
chr7 (87-206)||(36977733-36977852)
chr7 (81-206)||(9494623-9494748)
chr7 (328-452)||(37708692-37708816)
chr7 (97-208)||(10517128-10517239)
chr7 (81-206)||(37340435-37340560)
chr7 (104-206)||(47672902-47673004)
chr7 (1-63)||(17834537-17834599)
chr7 (89-206)||(17741274-17741391)
chr7 (115-206)||(556462-556552)
chr7 (81-144)||(15070606-15070669)
chr7 (115-206)||(14689874-14689965)
[»] chr8 (20 HSPs)
chr8 (1-208)||(39601754-39601961)
chr8 (1-208)||(39939031-39939238)
chr8 (1-208)||(41249888-41250095)
chr8 (12-206)||(15036545-15036740)
chr8 (5-202)||(42485358-42485557)
chr8 (4-202)||(489449-489649)
chr8 (48-208)||(45064339-45064499)
chr8 (1-208)||(35026537-35026745)
chr8 (12-208)||(39252086-39252267)
chr8 (12-206)||(39846806-39847002)
chr8 (82-206)||(43188181-43188305)
chr8 (82-206)||(25864756-25864880)
chr8 (82-206)||(34822835-34822961)
chr8 (81-208)||(43211637-43211764)
chr8 (81-184)||(5304009-5304112)
chr8 (81-206)||(40077067-40077192)
chr8 (138-206)||(45127937-45128005)
chr8 (115-206)||(35551832-35551922)
chr8 (174-202)||(489082-489110)
chr8 (1-29)||(43679447-43679475)
[»] chr5 (17 HSPs)
chr5 (1-208)||(7757375-7757582)
chr5 (10-208)||(14504-14703)
chr5 (1-208)||(28876693-28876901)
chr5 (52-208)||(8580320-8580476)
chr5 (5-202)||(28241619-28241818)
chr5 (81-206)||(19228489-19228614)
chr5 (81-206)||(512589-512714)
chr5 (86-206)||(38968231-38968351)
chr5 (82-206)||(42537276-42537399)
chr5 (107-206)||(42942304-42942403)
chr5 (115-206)||(8702040-8702131)
chr5 (81-150)||(30708778-30708847)
chr5 (115-206)||(17658488-17658579)
chr5 (81-144)||(28880202-28880265)
chr5 (115-206)||(40624740-40624831)
chr5 (174-202)||(28241252-28241280)
chr5 (1-29)||(28388514-28388542)
[»] chr2 (10 HSPs)
chr2 (16-208)||(7185094-7185286)
chr2 (1-208)||(28468691-28468899)
chr2 (5-202)||(42505582-42505781)
chr2 (46-208)||(21998284-21998448)
chr2 (12-208)||(45428651-45428848)
chr2 (1-208)||(32956170-32956366)
chr2 (1-206)||(45137249-45137456)
chr2 (82-206)||(25964944-25965068)
chr2 (5-208)||(17420622-17420825)
chr2 (97-208)||(39947746-39947857)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-207)||(18111-18316)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-207)||(54528-54733)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-208)||(7468-7676)
[»] chr4 (25 HSPs)
chr4 (1-208)||(21022703-21022911)
chr4 (12-206)||(50274795-50274990)
chr4 (1-208)||(40358095-40358303)
chr4 (1-202)||(1089404-1089607)
chr4 (5-202)||(1308934-1309133)
chr4 (1-202)||(30726561-30726764)
chr4 (82-206)||(55407608-55407732)
chr4 (86-206)||(8109529-8109649)
chr4 (1-152)||(37021933-37022084)
chr4 (81-206)||(51683332-51683456)
chr4 (82-206)||(67724-67847)
chr4 (86-206)||(48256389-48256509)
chr4 (87-203)||(21538281-21538397)
chr4 (89-206)||(50901620-50901737)
chr4 (115-206)||(46436410-46436501)
chr4 (115-206)||(11083832-11083923)
chr4 (82-150)||(40354705-40354775)
chr4 (117-206)||(41933439-41933527)
chr4 (115-203)||(10753256-10753344)
chr4 (115-203)||(10967025-10967113)
chr4 (115-206)||(14315540-14315631)
chr4 (115-206)||(14297291-14297382)
chr4 (175-208)||(37021903-37021936)
chr4 (174-202)||(1308567-1308595)
chr4 (1-29)||(16983572-16983600)
[»] chr1 (17 HSPs)
chr1 (1-208)||(29622239-29622447)
chr1 (5-202)||(30890115-30890314)
chr1 (1-208)||(22524176-22524385)
chr1 (1-206)||(31783549-31783738)
chr1 (5-194)||(19924809-19925001)
chr1 (1-206)||(47502370-47502571)
chr1 (82-208)||(52802264-52802388)
chr1 (81-206)||(23275925-23276050)
chr1 (78-206)||(11183305-11183434)
chr1 (81-206)||(35258689-35258814)
chr1 (86-193)||(45825023-45825130)
chr1 (87-206)||(51320851-51320972)
chr1 (81-181)||(2425528-2425628)
chr1 (157-208)||(19527358-19527409)
chr1 (88-144)||(13636271-13636327)
chr1 (1-29)||(13633919-13633947)
chr1 (174-202)||(30890653-30890681)
[»] chr3 (23 HSPs)
chr3 (12-208)||(50216695-50216892)
chr3 (60-208)||(50963064-50963212)
chr3 (1-208)||(3501709-3501918)
chr3 (27-208)||(47074024-47074205)
chr3 (46-208)||(596854-597017)
chr3 (81-208)||(3975837-3975964)
chr3 (1-208)||(42165213-42165421)
chr3 (82-206)||(49196264-49196388)
chr3 (81-208)||(4008138-4008265)
chr3 (81-202)||(48888867-48888988)
chr3 (82-206)||(20917834-20917957)
chr3 (82-206)||(20926796-20926919)
chr3 (86-206)||(30255819-30255939)
chr3 (37-206)||(51807054-51807225)
chr3 (86-206)||(42756289-42756409)
chr3 (79-206)||(48563071-48563198)
chr3 (116-206)||(44229881-44229971)
chr3 (82-156)||(42807498-42807572)
chr3 (81-144)||(2647828-2647891)
chr3 (82-114)||(44227246-44227278)
chr3 (1-52)||(49268817-49268868)
chr3 (1-29)||(2267106-2267134)
chr3 (1-29)||(50998649-50998677)
[»] scaffold0101 (2 HSPs)
scaffold0101 (51-202)||(40855-41007)
scaffold0101 (81-144)||(36676-36739)
[»] scaffold0293 (1 HSPs)
scaffold0293 (1-189)||(556-745)
[»] scaffold0180 (1 HSPs)
scaffold0180 (81-208)||(15437-15564)
[»] chr6 (8 HSPs)
chr6 (81-180)||(6320371-6320470)
chr6 (85-206)||(24088601-24088722)
chr6 (111-208)||(31768861-31768958)
chr6 (115-206)||(3380939-3381030)
chr6 (107-165)||(21600751-21600809)
chr6 (1-59)||(31768803-31768861)
chr6 (88-144)||(22304976-22305032)
chr6 (1-32)||(18351635-18351666)
[»] scaffold0155 (1 HSPs)
scaffold0155 (95-206)||(8349-8460)


Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-113; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 233 - 452
Target Start/End: Original strand, 37714944 - 37715163
Alignment:
Q  233 ttagggtacataggggagtaattaattttaattaaatggtgaatgatacatagattaggggggacaagcaagacccttagcatgaagtagaaggggatga 332  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37714944 ttagggtacataggggagtaattaattttagttaaatggtgaatgatacatagattaggggggacaagtaagacccttagcatgaagtagaaggggatga 37715043  T
Q  333 aaagtccctctcaaggggaacaagctcaaaggtgtcaccaatctatcttaatatggacaatggaacatgtcccatccttgcaaccatgggccataacaaa 432  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37715044 gaagtccctctcaaggggaacaagctcaaaggtgtcaccaatctatcttaatatggacaatggaacatgtcccatccttgcaaccatgggccataacaaa 37715143  T
Q  433 taatccaccacaaatttgat 452  Q
    ||||||||||||||||||||    
T  37715144 taatccaccacaaatttgat 37715163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 34738414 - 34738622
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaac-ttcccatttccaaaacaatttcaaaattctcaatttctct 99  Q
    |||||||||||||||||||||||| |||||||  || ||||||| |||||||||||||| || ||||||||||||||  |||||||||| ||||||||||    
T  34738414 aaaacctcggtagttaactgccgaggaaatctgaacataatcatacgcagaaccagaacctttccatttccaaaacatcttcaaaattcacaatttctct 34738513  T
Q  100 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 199  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34738514 ccaatcttcaccaaatctattttcacgaattgcaagcaaatcatctgcacattatcacaagtaagttgtgtcaatcattttaatgataatgttaatttgt 34738613  T
Q  200 ttaggttga 208  Q
    |||||||||    
T  34738614 ttaggttga 34738622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 17835185 - 17835334
Alignment:
Q  58 acttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcac 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17835185 acttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcac 17835284  T
Q  158 aagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  17835285 aagtaagttgt-tcaatcattttaatgttaatgttaatttgtttatgttga 17835334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 15074251 - 15074048
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaat-ttcaaaattctcaatttctc 98  Q
    |||||||||||||||||||| ||| ||||||| ||| ||| ||   |||||||||||||| |||||||| ||||| ||  ||||||||||||||||||||    
T  15074251 aaaacctcggtagttaactgtcgaggaaatctggacataaccagaacgcagaaccagaacctcccatttacaaaaaaacattcaaaattctcaatttctc 15074152  T
Q  99 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 198  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15074151 tccaatcttcaccaaatccattttcacgaattgtaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatattaatttg 15074052  T
Q  199 ttta 202  Q
    ||||    
T  15074051 ttta 15074048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 42508050 - 42507847
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaat-ttcaaaattctcaatttctc 98  Q
    |||| ||| ||||||||||||||| ||||||| ||| ||| ||   |||||||||||||| || ||||| ||||| ||  ||||||||||||||||||||    
T  42508050 aaaatctcagtagttaactgccgaggaaatctggacataaccagaacgcagaaccagaacctctcatttacaaaaaaacattcaaaattctcaatttctc 42507951  T
Q  99 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  42507950 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaacttgtgtcaaacattttaatgttaatgttaatttg 42507851  T
Q  199 ttta 202  Q
    ||||    
T  42507850 ttta 42507847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 27453632 - 27453436
Alignment:
Q  12 agttaactgccgaagaaatctagacttaatcattcgcagaaccagaac--ttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttca 109  Q
    ||||||||||||| |||||||  |||||||||| ||||||| |||||   || |||||||||||||   |||||||||| ||||||||||||||||||||    
T  27453632 agttaactgccgaggaaatctgaacttaatcatacgcagaaacagaaacattaccatttccaaaacttcttcaaaattcacaatttctctccaatcttca 27453533  T
Q  110 ccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  27453532 ccaaagccattttcacaaattgcaagcaaatcaattgcacattatcacaagtaagttgtatcaatcattttaatgataatgttagtttgtttaggtt 27453436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 47776382 - 47776589
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaac--ttcccatttccaaaacaatttcaaaattctcaatttctc 98  Q
    |||||||||||| ||||||||||| |||||||  |||||||||| ||||||| |||||   || |||||||||||||   | |||||||| | |||||||    
T  47776382 aaaacctcggtaattaactgccgaggaaatctgaacttaatcatacgcagaaacagaaacattaccatttccaaaacttctccaaaattcaccatttctc 47776481  T
Q  99 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 198  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  47776482 tccaatcttcaccaaagtcattttcacaaattgcaagcaaatcaactgcacattatcacaagtaaggtgtatcaatcattttaatgataatgttagtttg 47776581  T
Q  199 tttaggtt 206  Q
    ||||||||    
T  47776582 tttaggtt 47776589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 82 - 206
Target Start/End: Original strand, 39460660 - 39460784
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 181  Q
    ||||||||||||||||||| ||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39460660 aaaattctcaatttctctctaatgttcaccaaagtcattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcatttta 39460759  T
Q  182 atgttaatgttaatttgtttaggtt 206  Q
    ||| |||||||| ||||||||||||    
T  39460760 atgataatgttagtttgtttaggtt 39460784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 36977733 - 36977852
Alignment:
Q  87 tctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgtt 186  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |    
T  36977733 tctcaaattctttccaatcttcaccaaagccattttcacgaattgcaagcaaatcaactgtacattatcacaagtaagttgtatcaatcattttaatgat 36977832  T
Q  187 aatgttaatttgtttaggtt 206  Q
    ||||||| ||||||||||||    
T  36977833 aatgttagtttgtttaggtt 36977852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 81 - 206
Target Start/End: Complemental strand, 9494748 - 9494623
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||| ||||||| |||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9494748 caaacttctcaaattcttttcaatcttcaccaaagccattttcacgaattccaagcaaatcaactgcacattatcacaagtaagttgtatcaatcatttt 9494649  T
Q  181 aatgttaatgttaatttgtttaggtt 206  Q
    |||| |||||||| ||||||||||||    
T  9494648 aatgataatgttagtttgtttaggtt 9494623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 328 - 452
Target Start/End: Original strand, 37708692 - 37708816
Alignment:
Q  328 gatgaaaagtccctctcaaggggaacaagctcaaaggtgtcaccaatctatcttaatatggacaatggaacatgtcccatccttgcaaccatgggccata 427  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||   |||||| |||||||||||    
T  37708692 gatgagaagtccctctcaaagggaacaagctcaaaagtgtcactaatctatcttaatatggacaatggaagatgtcccaattttgcaatcatgggccata 37708791  T
Q  428 acaaataatccaccacaaatttgat 452  Q
    |||||||||||||||||||||||||    
T  37708792 acaaataatccaccacaaatttgat 37708816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 10517128 - 10517239
Alignment:
Q  97 tctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatt 196  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  10517128 tctccaatcttcaccaaatcttctttcacgaattgcaagcaaatcaactgcacattatcacaagtaagctgtgtcaatcattttaatcataatgttaatt 10517227  T
Q  197 tgtttaggttga 208  Q
    ||||||||||||    
T  10517228 tgtttaggttga 10517239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 81 - 206
Target Start/End: Original strand, 37340435 - 37340560
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||| ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  37340435 caaacttctcaaattctttccaatcttcaccaaagccattttcacgaattgcaagcaaatcaacagcacattatcacaagtaagttgtatcaatcatttt 37340534  T
Q  181 aatgttaatgttaatttgtttaggtt 206  Q
    ||   |||||||| ||||||||||||    
T  37340535 aacaataatgttagtttgtttaggtt 37340560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 104 - 206
Target Start/End: Complemental strand, 47673004 - 47672902
Alignment:
Q  104 tcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttag 203  Q
    |||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  47673004 tcttcatcaaagctattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcattttaatgataatgttagtttgtttag 47672905  T
Q  204 gtt 206  Q
    |||    
T  47672904 gtt 47672902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17834537 - 17834599
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcc 63  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||    
T  17834537 aaaacttcggtagttaactgccgaggaaatctggacttaatcattcacagaaccataacttcc 17834599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 17741391 - 17741274
Alignment:
Q  89 tcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaa 188  Q
    |||| ||||||| |||  |||||||| ||||||||||||||| ||||| ||||| |  |||||||||| |||||||| |  | | ||||| |||| ||||    
T  17741391 tcaacttctctctaattctcaccaaagccattttcacgaattacaagccaatcatccccacattatcaaaagtaagtagcattagtcattgtaatcttaa 17741292  T
Q  189 tgttaatttgtttaggtt 206  Q
    ||||| ||||||||||||    
T  17741291 tgttagtttgtttaggtt 17741274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 556552 - 556462
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    ||||||||||||| |||||||||| ||| || |||||||||||| |||||| |  | ||||| | |||||||||||||| ||||||||||||    
T  556552 tccattttcacgatttgcaagcaa-tcatctccacattatcacaggtaagtagcattaatcaatgtaatgttaatgttagtttgtttaggtt 556462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 15070606 - 15070669
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaac 144  Q
    |||||||||||||||||||| ||||||| |||||||   ||||||||||||| |||||||||||    
T  15070606 caaaattctcaatttctctcaaatcttcgccaaatcttctttcacgaattgcgagcaaatcaac 15070669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 14689965 - 14689874
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||||||||||||||  | ||| |  |||||||||||||||||||    | |||||||  |||| |||||||||||||||||||||    
T  14689965 tccattttcacgaattgcaagacattcatcctcacattatcacaagtaagtaccattaatcattgcaatggtaatgttaatttgtttaggtt 14689874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 39601754 - 39601961
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 100  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39601754 aaaacctcgggagttaactgccgaggaaatctggacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 39601853  T
Q  101 caatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtt 200  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39601854 caatcttcgccaaattcattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtt 39601953  T
Q  201 taggttga 208  Q
    ||||||||    
T  39601954 taggttga 39601961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 39939238 - 39939031
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 100  Q
    ||||||| |||||||||||||| |  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39939238 aaaacctaggtagttaactgcctagaaaatctggacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 39939139  T
Q  101 caatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtt 200  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39939138 caatcttcaccaagtccattttcacgaattgaaagcaaatcaattgcacattatcacaagtaagttgtgtcaatcattttaatgataatgttaatttgtt 39939039  T
Q  201 taggttga 208  Q
    ||||||||    
T  39939038 taggttga 39939031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 41250095 - 41249888
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 100  Q
    ||||||||| | |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||   |||||||||| |||||||||||    
T  41250095 aaaacctcgatggttaactgccgaggaaatctggacttaatcatttgcagaaccagaacttcccatttccaaaacttgttcaaaattcacaatttctctc 41249996  T
Q  101 caatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41249995 caatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgataatgttaatttgtt 41249896  T
Q  201 taggttga 208  Q
    ||||||||    
T  41249895 taggttga 41249888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 15036740 - 15036545
Alignment:
Q  12 agttaactgccgaagaaatctagacttaatcat-tcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcac 110  Q
    ||||||||||||| |||||||  |||||| ||  ||||||||||||||| |||||||| ||||| | |||| ||||||||||||||||||||||||||||    
T  15036740 agttaactgccgaggaaatctgaacttaaacagatcgcagaaccagaacctcccattttcaaaaaactttctaaattctcaatttctctccaatcttcac 15036641  T
Q  111 caaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15036640 caaatccattttcgcgaattgcaagcaaatcaagtgcacattatcacaaataagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 15036545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 42485557 - 42485358
Alignment:
Q  5 cctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaat-ttcaaaattctcaatttctctcca 102  Q
    ||||||||||||||| |||| ||||||| ||| ||| ||   |||||||||||||| |||||||| ||||| ||  |||||||||||||| |||||||||    
T  42485557 cctcggtagttaactaccgaggaaatctggacataaccagaacgcagaaccagaacctcccatttacaaaaaaacattcaaaattctcaaattctctcca 42485458  T
Q  103 atcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttta 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42485457 atcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttta 42485358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 4 - 202
Target Start/End: Complemental strand, 489649 - 489449
Alignment:
Q  4 acctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaat-ttcaaaattctcaatttctctcc 101  Q
    ||||||||||||||||||||| ||||||| ||| ||| ||   |||||||||||||| |||||||| ||||| ||  ||||||||| |||| ||||||||    
T  489649 acctcggtagttaactgccgaggaaatctggacataaccagaacgcagaaccagaacctcccatttacaaaaaaacattcaaaattttcaaattctctcc 489550  T
Q  102 aatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttt 201  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  489549 gatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttt 489450  T
Q  202 a 202  Q
    |    
T  489449 a 489449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 45064339 - 45064499
Alignment:
Q  48 cagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgc 147  Q
    |||||||||||| |  ||||||||||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  45064339 cagaaccagaacctttcatttccaaaaaaccttctaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgc 45064438  T
Q  148 acattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45064439 acattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 45064499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 35026537 - 35026745
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaac-ttcccatttccaaaacaatttcaaaattctcaatttctct 99  Q
    |||||||||||||||||| ||||| |||||||  || |||||||  |||| |||||||| || | |||| |||||||  ||||||||||  |||||||||    
T  35026537 aaaacctcggtagttaaccgccgatgaaatctgaacataatcatatgcagcaccagaacctttctattttcaaaacatcttcaaaattcgaaatttctct 35026636  T
Q  100 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 199  Q
     ||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35026637 acaatcttcaccaaattcattttcacgaattgcaagcaaattaactacacattatcacaagtaagttgtgtcaatcattttaatgataatgttaatttgt 35026736  T
Q  200 ttaggttga 208  Q
    |||||||||    
T  35026737 ttaggttga 35026745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 39252086 - 39252267
Alignment:
Q  12 agttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcacc 111  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||||               ||||||||||||||||||    
T  39252086 agttaactgccgaggaaatttggacttaatcattcgcagaaccagaccttcccatttccaaaacaat---------------ttctctccaatcttcacc 39252170  T
Q  112 aaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    |||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39252171 aaattcattttcacgaattgcaagcaaatcaagtgcgcgttatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 39252267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 12 - 206
Target Start/End: Complemental strand, 39847002 - 39846806
Alignment:
Q  12 agttaactgccgaagaaatctagacttaatcattcgcagaaccagaac--ttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttca 109  Q
    ||||||||||||| |||||||  |||||||||| |||| || || ||   || |||||| ||||||   | |||||||| ||||||||||||||||||||    
T  39847002 agttaactgccgaggaaatctgaacttaatcatacgcaaaaacaaaaacattaccattttcaaaacttctccaaaattcacaatttctctccaatcttca 39846903  T
Q  110 ccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    ||||| |||||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  39846902 ccaaagccattttcacaaattgcaagcaaaccaattgcacattatcacaagtaagttgtatcaatcattttaatgataatgttagtttgtttaggtt 39846806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 82 - 206
Target Start/End: Original strand, 43188181 - 43188305
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 181  Q
    |||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  43188181 aaaattctcaatttctctccaatcttcaccaaagtcattttcaagaattgcaagcaaatcaactgcatattgtcacaagtaagttgtatcaatcatttta 43188280  T
Q  182 atgttaatgttaatttgtttaggtt 206  Q
    ||| |||||||| ||||||||||||    
T  43188281 atgataatgttagtttgtttaggtt 43188305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 82 - 206
Target Start/End: Complemental strand, 25864880 - 25864756
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 181  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||||| |||||||||| |||||||||||||||||||||| | ||||||||||    
T  25864880 aaaattctcaatttctctctaatcttcaccaaagtcattttcacgaattgcaatcaaatcaactacacattatcacaagtaagttgtattaatcatttta 25864781  T
Q  182 atgttaatgttaatttgtttaggtt 206  Q
    ||| |||||||| ||||||||||||    
T  25864780 atgataatgttagtttgtttaggtt 25864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 82 - 206
Target Start/End: Complemental strand, 34822961 - 34822835
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaag--taagttgtgtcaatcattt 179  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |||||||||||||||||||  |||||||| ||||||||||    
T  34822961 aaaattctcaatttctctccaatcttcaccaaaacttttttcacgaattgcaagcaaattaactgcacattatcacaagtataagttgtatcaatcattt 34822862  T
Q  180 taatgttaatgttaatttgtttaggtt 206  Q
    ||||| |||||||| ||||||||||||    
T  34822861 taatgataatgttagtttgtttaggtt 34822835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 81 - 208
Target Start/End: Original strand, 43211637 - 43211764
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||||||| ||| || ||||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43211637 caaaattcacaaattttctccaatcttcaccaaatcttctttcacgaattgcaagcaaatcaactgcacattaccacaagtaagttgtgtcaatcatttt 43211736  T
Q  181 aatgttaatgttaatttgtttaggttga 208  Q
    |||  |||||||||||||||| ||||||    
T  43211737 aatcataatgttaatttgttttggttga 43211764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 81 - 184
Target Start/End: Complemental strand, 5304112 - 5304009
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||| ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5304112 caaacttctcaaattctttccaatcttcaccaaagccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcatttt 5304013  T
Q  181 aatg 184  Q
    ||||    
T  5304012 aatg 5304009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 81 - 206
Target Start/End: Complemental strand, 40077192 - 40077067
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||| ||||| | |||| ||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||    
T  40077192 caaacttctctaattctttccaatcttcaacaaagccattttcacgaattgcaagcaaatcaagtgcacattatcagaagtaagttgtatcaatcatttt 40077093  T
Q  181 aatgttaatgttaatttgtttaggtt 206  Q
    |||| |||||||| ||||||||||||    
T  40077092 aatgataatgttagtttgtttaggtt 40077067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 45127937 - 45128005
Alignment:
Q  138 aatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    ||||| || ||||||||||||||||||| |  | ||||| |||||| ||||||||| ||||||||||||    
T  45127937 aatcatctccacattatcacaagtaagtagcattaatcaatttaatcttaatgttagtttgtttaggtt 45128005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 206
Target Start/End: Original strand, 35551832 - 35551922
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||| || |||||||||| ||| || |||||||||||| |||||| |  | ||||| |  ||||||||||||| ||||||||||||    
T  35551832 tccattttcaagatttgcaagcaa-tcatctccacattatcacatgtaagtagcattaatcaatgcaatgttaatgttagtttgtttaggtt 35551922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 489110 - 489082
Alignment:
Q  174 tcattttaatgttaatgttaatttgttta 202  Q
    |||||||||||||||||||||||||||||    
T  489110 tcattttaatgttaatgttaatttgttta 489082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 43679447 - 43679475
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaa 29  Q
    |||||||||||||||||||||||||||||    
T  43679447 aaaacctcggtagttaactgccgaagaaa 43679475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 2e-99; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 7757375 - 7757582
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 100  Q
    ||||||||| |||||||||||||| ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7757375 aaaacctcgctagttaactgccgaggaaatctggacttaatcactcgcagaaccagaactttccatttccaaaacaatttcaaaattctcaatttctctc 7757474  T
Q  101 caatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtt 200  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7757475 caatcttcaccaaatctattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtt 7757574  T
Q  201 taggttga 208  Q
    ||||||||    
T  7757575 taggttga 7757582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 10 - 208
Target Start/End: Complemental strand, 14703 - 14504
Alignment:
Q  10 gtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttc 108  Q
    ||||||||||||||| |||||||  ||| || ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14703 gtagttaactgccgaggaaatctgaactaaaccagaacgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttc 14604  T
Q  109 accaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14603 aacaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 14504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 28876693 - 28876901
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctct 99  Q
    |||||||||| ||||||||||||| |||||||  || ||| ||   |||||||||||||| |||||||||||||| |  |||||||||||||||||||||    
T  28876693 aaaacctcggcagttaactgccgaggaaatctgaacataaccagaacgcagaaccagaacctcccatttccaaaaaaccttcaaaattctcaatttctct 28876792  T
Q  100 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28876793 ccaatcttccccaaatccattttcacgaattgcaagcaaatcaagtggccattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 28876892  T
Q  200 ttaggttga 208  Q
    |||||||||    
T  28876893 ttaggttga 28876901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 52 - 208
Target Start/End: Complemental strand, 8580476 - 8580320
Alignment:
Q  52 accagaacttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacat 151  Q
    |||||||| |||||||||||||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  8580476 accagaacctcccatttccaaaaaaccttctaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaaccaagtgcacat 8580377  T
Q  152 tatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8580376 tatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 8580320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 28241818 - 28241619
Alignment:
Q  5 cctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaat-ttcaaaattctcaatttctctcca 102  Q
    |||||||||||||||||||| ||||||| ||| ||| ||   |||||||||||||| |||||||| ||||| ||  |||||||||||||| |||||||||    
T  28241818 cctcggtagttaactgccgaggaaatctggacataaccagaacgcagaaccagaacctcccatttacaaaaaaacattcaaaattctcaaattctctcca 28241719  T
Q  103 atcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttta 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  28241718 atcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtaccaatcattttaatgttaatgttaatttgttta 28241619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 81 - 206
Target Start/End: Complemental strand, 19228614 - 19228489
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||| ||||||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19228614 caaacttctcaaattctttccaatcttcaccaaaatcattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcatttt 19228515  T
Q  181 aatgttaatgttaatttgtttaggtt 206  Q
    |||| |||||||| ||||||||||||    
T  19228514 aatgataatgttagtttgtttaggtt 19228489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 81 - 206
Target Start/End: Complemental strand, 512714 - 512589
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||| ||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  512714 caaacttctcaaattctttccaatcttcaccaaagccattttcatgaattgcaagcaaatcaactgtacattatcacaagtaagttgtatcaatcatttt 512615  T
Q  181 aatgttaatgttaatttgtttaggtt 206  Q
    |||| |||||||| ||||||||||||    
T  512614 aatgataatgttagtttgtttaggtt 512589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 38968231 - 38968351
Alignment:
Q  86 ttctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgt 185  Q
    ||||||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  38968231 ttctcaaattctttccaatcttcaccaaagtcattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcattttaatga 38968330  T
Q  186 taatgttaatttgtttaggtt 206  Q
    |||||||| |||||| |||||    
T  38968331 taatgttagtttgttaaggtt 38968351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 82 - 206
Target Start/End: Original strand, 42537276 - 42537399
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 181  Q
    |||||||||||||||| |||||||| ||||||| ||||| | ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  42537276 aaaattctcaatttctttccaatctgcaccaaagccattct-acgaattgcaagcaaatcaactgcacattatcacaagcaagttgtatcaatcatttta 42537374  T
Q  182 atgttaatgttaatttgtttaggtt 206  Q
    ||| |||||||  ||||||||||||    
T  42537375 atgataatgttggtttgtttaggtt 42537399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 107 - 206
Target Start/End: Complemental strand, 42942403 - 42942304
Alignment:
Q  107 tcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    ||||||||||||||| |   |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||| ||||||||||||    
T  42942403 tcaccaaatccatttccgttaattgcaagcaaatcaaccgcacattatcacaagtaagttgcatcaatcattttaatgataatgttagtttgtttaggtt 42942304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 8702131 - 8702040
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||||||||||||||  ||||| |  |||||||||||||||||||  | | |||||||  ||| ||||||||||||||||||||||    
T  8702131 tccattttcacgaattgcaagttaatcatccccacattatcacaagtaagtactattaatcattgcaatcttaatgttaatttgtttaggtt 8702040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 30708847 - 30708778
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcaca 150  Q
    |||||||||||||||||||||||||||| |||||||   |||||||||||| | |||||||||| |||||    
T  30708847 caaaattctcaatttctctccaatcttcgccaaatcttctttcacgaattggaggcaaatcaacggcaca 30708778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 206
Target Start/End: Original strand, 17658488 - 17658579
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||||||||||||||  ||||| |  |||||||||||| ||||||    | |||||||  ||||||||||||||||||||||||||    
T  17658488 tccattttcacgaattgcaagacaatcatccccacattatcacaggtaagtaccattaatcattgcaatgttaatgttaatttgtttaggtt 17658579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 28880265 - 28880202
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaac 144  Q
    ||||||||||||||| |||||||||||| |||||||   |||||||||||||| ||||||||||    
T  28880265 caaaattctcaatttttctccaatcttcgccaaatcttatttcacgaattgcatgcaaatcaac 28880202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 40624831 - 40624740
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||||||||||||||| ||||| |  |||||||||||||||||||    |  ||||||  ||||||||||||| ||||||||||||    
T  40624831 tccattttcacgaattgcaagccaatcatccccacattatcacaagtaagtaccattgatcattgcaatgttaatgttagtttgtttaggtt 40624740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 28241280 - 28241252
Alignment:
Q  174 tcattttaatgttaatgttaatttgttta 202  Q
    |||||||||||||||||||||||||||||    
T  28241280 tcattttaatgttaatgttaatttgttta 28241252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 28388542 - 28388514
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaa 29  Q
    |||||||||||||||||||||||||||||    
T  28388542 aaaacctcggtagttaactgccgaagaaa 28388514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 2e-90; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 16 - 208
Target Start/End: Original strand, 7185094 - 7185286
Alignment:
Q  16 aactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcaccaaat 115  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7185094 aactgccgaggaaatctggacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcaccaaat 7185193  T
Q  116 ccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  7185194 ccattttcacgaattgcaagcaaatcaagtgcgcattatcacaagtaagttgtgtcaataattttaatgttaatgttgatttgtttaggttga 7185286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 28468691 - 28468899
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcat-tcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctct 99  Q
    |||||||||||||||||||||||| |||||||  |||||| ||  | ||||||||||||| |||||||||||||| |  | |||||||||||||||||||    
T  28468691 aaaacctcggtagttaactgccgaggaaatctgaacttaaacagatggcagaaccagaacctcccatttccaaaaaacctccaaaattctcaatttctct 28468790  T
Q  100 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28468791 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcatttgaatgttaatgttaatttgt 28468890  T
Q  200 ttaggttga 208  Q
    |||||||||    
T  28468891 ttaggttga 28468899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 42505781 - 42505582
Alignment:
Q  5 cctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaat-ttcaaaattctcaatttctctcca 102  Q
    |||||||||||||||||||| ||||||| ||| ||| ||   |||||||||||||| |||||||| ||||| ||  ||||||||| |||| |||||||||    
T  42505781 cctcggtagttaactgccgaggaaatctggacataaccagaacgcagaaccagaacctcccatttacaaaaaaacattcaaaattttcaaattctctcca 42505682  T
Q  103 atcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttta 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42505681 atcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttta 42505582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 46 - 208
Target Start/End: Original strand, 21998284 - 21998448
Alignment:
Q  46 cgcagaaccagaacttcccatttccaaaacaat--ttcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaa 143  Q
    |||||||||||||| |||||||||||||| ||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21998284 cgcagaaccagaacctcccatttccaaaaaaaaccttctaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaa 21998383  T
Q  144 ctgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
     || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21998384 ttgtacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 21998448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 12 - 208
Target Start/End: Original strand, 45428651 - 45428848
Alignment:
Q  12 agttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcac 110  Q
    |||||||||||||||||| || ||| ||| ||   ||||||||||||||||| ||||||||||||  ||||||| ||  ||||||||||| ||||||| |    
T  45428651 agttaactgccgaagaaaactggacataaccagaacgcagaaccagaacttctcatttccaaaaccttttcaaatttaacaatttctctcaaatcttctc 45428750  T
Q  111 caaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45428751 caaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 45428848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 32956366 - 32956170
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 100  Q
    |||| ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||  |||||||||     
T  32956366 aaaatctcggtagtcaactgccgaggaaatctggacttaatcattcgcagaaccagaacttcccatttccaaaactttttcaaaattcagaatttctcta 32956267  T
Q  101 caatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtt 200  Q
     ||||           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32956266 gaatc-----------cattttcacaaatagcaagcaaatcaactgcacattatcacaagtaagttgtgccaatcattttaatgttaatgttaatttgtt 32956178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 45137456 - 45137249
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaac--ttcccatttccaaaacaatttcaaaattctcaatttctc 98  Q
    ||||| ||| |||||||||||||| |||||||| |||||||||| ||||||| || ||   || ||||||||||||    | |||||||| |||||||||    
T  45137456 aaaacttcgatagttaactgccgatgaaatctaaacttaatcatacgcagaaacaaaaacattaccatttccaaaatttctccaaaattcacaatttctc 45137357  T
Q  99 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 198  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||| ||||    
T  45137356 tccaatcttcaccaaagccattttcacaaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcattttaatgatagtgttagtttg 45137257  T
Q  199 tttaggtt 206  Q
    ||||||||    
T  45137256 tttaggtt 45137249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 82 - 206
Target Start/End: Original strand, 25964944 - 25965068
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 181  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25964944 aaaattctcaatttctctccaatcttcaccaaagccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcatttta 25965043  T
Q  182 atgttaatgttaatttgtttaggtt 206  Q
    ||  |||||||| ||||||||||||    
T  25965044 atcataatgttagtttgtttaggtt 25965068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 17420622 - 17420825
Alignment:
Q  5 cctcggtagttaactgccgaagaaatctagacttaatcat-tcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctccaa 103  Q
    |||||||||||||||||||| |||||||  |||||| ||  ||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||| |    
T  17420622 cctcggtagttaactgccgaggaaatctgaacttaaacagatcgcagaaccagaacctcccatttccaaaaaaccttcaaaattctcaatttctctccca 17420721  T
Q  104 tcttc-accaaatccattttcacgaattg-caagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttt 201  Q
    | | | ||||||||||||| ||||||||  ||| |   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17420722 tttcctaccaaatccattt-cacgaattctcaacct--tcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttt 17420818  T
Q  202 aggttga 208  Q
    |||||||    
T  17420819 aggttga 17420825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 39947746 - 39947857
Alignment:
Q  97 tctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatt 196  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||     
T  39947746 tctccaatcttcaccaaatcttctttcacgaattgcaagcaaatcaacggcacattatcacaagtaagttgtgtcaatcattttaatcataatgttaata 39947845  T
Q  197 tgtttaggttga 208  Q
    ||||||||||||    
T  39947846 tgtttaggttga 39947857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 18316 - 18111
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 100  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||    
T  18316 aaaacctcggtagttaactgccgagaaaatctggacttaatcattcgcagaaccagaacttcccatttccaaaatt-tttcaaaattcacaatttctctc 18218  T
Q  101 caatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18217 caatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgataatgttaatttgtt 18118  T
Q  201 taggttg 207  Q
    |||||||    
T  18117 taggttg 18111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 54528 - 54733
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 100  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||| |||||||||||    
T  54528 aaaacctcggtagttaactgccgagaaaatctggacttaatcattcgcagaaccagaacttcccatttccaaaatt-tttcaaaattcacaatttctctc 54626  T
Q  101 caatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  54627 caatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgataatgttaatttgtt 54726  T
Q  201 taggttg 207  Q
    |||||||    
T  54727 taggttg 54733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 165; Significance: 4e-88; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 7468 - 7676
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcat-tcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctct 99  Q
    |||||||||||||||||||||||| |||||||  |||||| ||  ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||    
T  7468 aaaacctcggtagttaactgccgaggaaatctgaacttaaacaaatcgcagaaccagaacctcccatttccaaaacactttctaaattctcaatttctct 7567  T
Q  100 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7568 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 7667  T
Q  200 ttaggttga 208  Q
    |||||||||    
T  7668 ttaggttga 7676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 3e-83; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 21022911 - 21022703
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctct 99  Q
    |||||||||||||||||||||||| |||||||  ||| || ||   |||| ||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  21022911 aaaacctcggtagttaactgccgaggaaatctgaactaaaccagaacgcaaaaccagaacttcccatttccaaaacaatttctaaattctcaattgctct 21022812  T
Q  100 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21022811 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 21022712  T
Q  200 ttaggttga 208  Q
    |||||||||    
T  21022711 ttaggttga 21022703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 12 - 206
Target Start/End: Original strand, 50274795 - 50274990
Alignment:
Q  12 agttaactgccgaagaaatctagacttaatcattcgcagaaccagaac-ttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcac 110  Q
    ||||||||||||| |||||||  || ||||||| |||||||||||||| || ||||||||||||||  |||||||||| |||||||||||||||||||||    
T  50274795 agttaactgccgaggaaatctgaacataatcatacgcagaaccagaacctttccatttccaaaacatcttcaaaattcacaatttctctccaatcttcac 50274894  T
Q  111 caaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50274895 caaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgataatgttaatttgtttaggtt 50274990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 40358303 - 40358095
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctct 99  Q
    |||||||||||||||||||||||| |||||||  || ||| ||   ||||||| || ||| |||||||||||||| |  |||||||||||||||||||||    
T  40358303 aaaacctcggtagttaactgccgaggaaatctgaacataaccagaacgcagaatcaaaacctcccatttccaaaaaaccttcaaaattctcaatttctct 40358204  T
Q  100 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40358203 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 40358104  T
Q  200 ttaggttga 208  Q
    |||||||||    
T  40358103 ttaggttga 40358095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 1089607 - 1089404
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattc-gcagaaccagaacttcccatttccaaaacaat-ttcaaaattctcaatttctc 98  Q
    |||||||||||||||||||||||| ||||||| ||| ||| ||    | ||||||||||| |||||||| ||||| ||  ||||||||||||||||||||    
T  1089607 aaaacctcggtagttaactgccgaggaaatctggacataaccagaatgtagaaccagaacctcccatttacaaaaaaacattcaaaattctcaatttctc 1089508  T
Q  99 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1089507 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 1089408  T
Q  199 ttta 202  Q
    ||||    
T  1089407 ttta 1089404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 1309133 - 1308934
Alignment:
Q  5 cctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaat-ttcaaaattctcaatttctctcca 102  Q
    |||||||||||||||||||| ||||||| ||| ||| ||   |||||||||||||| |||||||| ||||| ||  |||||||||||||| |||||||||    
T  1309133 cctcggtagttaactgccgaggaaatctggacataaccagaacgcagaaccagaacctcccatttacaaaaaaacattcaaaattctcaaattctctcca 1309034  T
Q  103 atcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttta 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1309033 atcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttta 1308934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 30726764 - 30726561
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaat-ttcaaaattctcaatttctc 98  Q
    |||||||||||||||||||||||| ||||||| ||| |||  |   |||||||||| ||| |||||||| ||||| ||  ||||||||||||||||||||    
T  30726764 aaaacctcggtagttaactgccgaggaaatctggacataactagaacgcagaaccacaacctcccatttacaaaaaaacattcaaaattctcaatttctc 30726665  T
Q  99 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30726664 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 30726565  T
Q  199 ttta 202  Q
    ||||    
T  30726564 ttta 30726561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 82 - 206
Target Start/End: Complemental strand, 55407732 - 55407608
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 181  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  55407732 aaaattctcaatttctctccaatcttcaccaaaaccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcatttta 55407633  T
Q  182 atgttaatgttaatttgtttaggtt 206  Q
    ||| |||||||| ||||||||||||    
T  55407632 atgataatgttagtttgtttaggtt 55407608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 8109529 - 8109649
Alignment:
Q  86 ttctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgt 185  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  8109529 ttctcaatttctctccaatcttcaccaaattcattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcattttaatga 8109628  T
Q  186 taatgttaatttgtttaggtt 206  Q
    |||||||| ||||||||||||    
T  8109629 taatgttagtttgtttaggtt 8109649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 37022084 - 37021933
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 100  Q
    |||||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||| |||||||||||||  ||||||| ||  |||||||||||    
T  37022084 aaaacctcggcagttaactgccgagaaaatctggacttaatcattcgcagaaccagaactttccatttccaaaactttttcaaatttaacaatttctctc 37021985  T
Q  101 caatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacatt 152  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  37021984 caatcttcaccaaattcattttcacgaatagcaagcaaatcaactgcacatt 37021933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 81 - 206
Target Start/End: Original strand, 51683332 - 51683456
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||| ||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||    
T  51683332 caaacttctcaaattctttccaatcttcaccaaa-ccattttcacgaattgcaagcaaatcaactacacattatcacaagtaagttatatcaatcatttt 51683430  T
Q  181 aatgttaatgttaatttgtttaggtt 206  Q
    |||| |||||||| ||||||||||||    
T  51683431 aatgataatgttagtttgtttaggtt 51683456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 82 - 206
Target Start/End: Original strand, 67724 - 67847
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 181  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||    
T  67724 aaaattctcaatttctctcaaatcttcaccaaagtcattttcacgaattgcaagaaaatcaaccgcacattatcacaagtaagttgtatcaatcatttta 67823  T
Q  182 atgttaatgttaatttgtttaggtt 206  Q
    |||  ||||||| ||||||||||||    
T  67824 atg-aaatgttagtttgtttaggtt 67847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 48256509 - 48256389
Alignment:
Q  86 ttctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgt 185  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||     
T  48256509 ttctcaaattctttccaatcttcaccaaagccattttcacgaattgcaaacaaatcaactgcacattatcacaagtaaattgtatcaatcattttaatga 48256410  T
Q  186 taatgttaatttgtttaggtt 206  Q
    |||| ||| |||| |||||||    
T  48256409 taatattagtttgcttaggtt 48256389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 87 - 203
Target Start/End: Complemental strand, 21538397 - 21538281
Alignment:
Q  87 tctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgtt 186  Q
    |||||| |||||||| ||  |||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||||  |    
T  21538397 tctcaaattctctcccattctcaccaaagccattttcacgaattgcaagcaaatcaaccacacattatcacaagtaagttgcatcaatcattttaatcat 21538298  T
Q  187 aatgttaatttgtttag 203  Q
    ||||||| |||||||||    
T  21538297 aatgttagtttgtttag 21538281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 50901620 - 50901737
Alignment:
Q  89 tcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaa 188  Q
    |||| ||||||  ||| |||||||||||||||| |  ||||||||||||||||||  ||||||||||||||||||||||  ||||||||||||||| |||    
T  50901620 tcaaattctcttaaattttcaccaaatccatttccgtgaattgcaagcaaatcaatcgcacattatcacaagtaagttgcatcaatcattttaatgataa 50901719  T
Q  189 tgttaatttgtttaggtt 206  Q
    ||||| ||||||||||||    
T  50901720 tgttagtttgtttaggtt 50901737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 115 - 206
Target Start/End: Original strand, 46436410 - 46436501
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||||||||||||||| ||||| |  |||||||||||||||||||    | |||||||  ||||||||||||| ||||||||||||    
T  46436410 tccattttcacgaattgcaagccaatcatccccacattatcacaagtaagtaccattaatcattgcaatgttaatgttagtttgtttaggtt 46436501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 11083923 - 11083832
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||||||||||||||| ||||| |  |||||||||||||||||||    | |||||||  ||| ||||||||| ||||||||||||    
T  11083923 tccattttcacgaattgcaagccaatcatccccacattatcacaagtaagtaccattaatcattgcaatcttaatgttagtttgtttaggtt 11083832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 40354705 - 40354775
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccat-tttc-acgaattgcaagcaaatcaactgcaca 150  Q
    ||||||||||||||||||||||||||| |||||| | | |||| ||||||||||||||||||||| |||||    
T  40354705 aaaattctcaatttctctccaatcttcgccaaatacttctttctacgaattgcaagcaaatcaacggcaca 40354775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 206
Target Start/End: Complemental strand, 41933527 - 41933439
Alignment:
Q  117 cattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    ||||||||||| |||||||||| ||| || ||||||||||||||||||| |  | ||||| | |||| ||||||||| ||||||||||||    
T  41933527 cattttcacgatttgcaagcaa-tcatctccacattatcacaagtaagtagaattaatcaatgtaatcttaatgttagtttgtttaggtt 41933439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 10753344 - 10753256
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttag 203  Q
    |||||||||||||||||||||    ||| |  |||||||| ||||||||||||  ||||||||||||||  |||||||| |||||||||    
T  10753344 tccattttcacgaattgcaagtctctcatccccacattatgacaagtaagttgcatcaatcattttaatcataatgttagtttgtttag 10753256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 10967113 - 10967025
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttag 203  Q
    |||||||||||||||||||||    ||| |  |||||||| ||||||||||||  ||||||||||||||  |||||||| |||||||||    
T  10967113 tccattttcacgaattgcaagtctctcatccccacattatgacaagtaagttgcatcaatcattttaatcataatgttagtttgtttag 10967025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 206
Target Start/End: Original strand, 14315540 - 14315631
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||||||||||||||| ||||| |  ||||||||| |||||||||    | |||||||  ||| ||||||||| ||||||||||||    
T  14315540 tccattttcacgaattgcaagccaatcatccccacattatcccaagtaagtaccattaatcattgcaatcttaatgttagtttgtttaggtt 14315631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 206
Target Start/End: Original strand, 14297291 - 14297382
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    ||||| |||||||||||||||| ||||| |  ||||||||| |||||||||    | |||||||  ||| ||||||||| ||||||||||||    
T  14297291 tccatgttcacgaattgcaagccaatcatccccacattatcccaagtaagtaccattaatcattgcaatcttaatgttagtttgtttaggtt 14297382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 37021936 - 37021903
Alignment:
Q  175 cattttaatgttaatgttaatttgtttaggttga 208  Q
    |||||||||| |||||||||||||||||||||||    
T  37021936 cattttaatgataatgttaatttgtttaggttga 37021903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 1308595 - 1308567
Alignment:
Q  174 tcattttaatgttaatgttaatttgttta 202  Q
    |||||||||||||||||||||||||||||    
T  1308595 tcattttaatgttaatgttaatttgttta 1308567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 16983572 - 16983600
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaa 29  Q
    |||||||||||||||||||||||||||||    
T  16983572 aaaacctcggtagttaactgccgaagaaa 16983600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 6e-81; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 29622447 - 29622239
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctct 99  Q
    |||||||||||||||||||||||| |||||||  || ||| ||   |||||||||||||| |||||||||||||| |  |||||||||||||||||||||    
T  29622447 aaaacctcggtagttaactgccgaggaaatctgaacataaccagaacgcagaaccagaacctcccatttccaaaaaaccttcaaaattctcaatttctct 29622348  T
Q  100 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29622347 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgt 29622248  T
Q  200 ttaggttga 208  Q
    |||||||||    
T  29622247 ttaggttga 29622239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 30890115 - 30890314
Alignment:
Q  5 cctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaat-ttcaaaattctcaatttctctcca 102  Q
    |||||||||||||||||||| ||||||| ||| ||| ||   |||||||||||||| |||||||| ||||| ||  |||||||||||||| |||||||||    
T  30890115 cctcggtagttaactgccgaggaaatctggacataaccagaacgcagaaccagaacctcccatttacaaaaaaacattcaaaattctcaaattctctcca 30890214  T
Q  103 atcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttta 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30890215 atcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttta 30890314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 22524176 - 22524385
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttc-ccatttccaaaacaatttcaaaattctcaatttctc 98  Q
    ||||||||||||||||||||||||  ||||||  || ||| ||   ||||||| ||||||||| ||||||| ||||||| | |||||||||||| |||||    
T  22524176 aaaacctcggtagttaactgccgagaaaatctgaacataaccagaacgcagaaacagaacttctccatttcaaaaacaactccaaaattctcaaattctc 22524275  T
Q  99 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 198  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22524276 tccaatcttcaccaaatcgattttcacgaattgcaagcaaatcaactgcaaattatcacaagtaagttgtgtcaatcattttaatgataatgttaatttg 22524375  T
Q  199 tttaggttga 208  Q
    ||||||||||    
T  22524376 tttaggttga 22524385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 31783738 - 31783549
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 100  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  31783738 aaaacctcgggagttaactgccgaggaaatcttgacttaatcattcgtagaaccagaacttcctatttccaaaacaatttcaaaattctcaatttctctt 31783639  T
Q  101 caatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||                |||||||||||||||||||||||||||||||||    
T  31783638 caatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacat----------------tgtcaatcattttaatgttaatgttaatttgtt 31783555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 5 - 194
Target Start/End: Original strand, 19924809 - 19925001
Alignment:
Q  5 cctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaat--ttcaaaattctcaatttctctcc 101  Q
    |||||| ||||||||||||| ||||||| ||| ||| ||   |||||||||||||| |||||||| ||||| ||   |||||||||||||||||||||||    
T  19924809 cctcggcagttaactgccgaggaaatctggacataaccagaacgcagaaccagaacctcccatttacaaaaaaaacattcaaaattctcaatttctctcc 19924908  T
Q  102 aatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19924909 aatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcgcattatcacaagtaagttgtgtcaatcattttaatgttaatgttaa 19925001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 47502370 - 47502571
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctc 100  Q
    |||||| |||||||||||| ||||||||||||  | |||||||| ||||||| ||    || |||||||||||||   | |||||||| |||||||||||    
T  47502370 aaaaccccggtagttaactaccgaagaaatctgaatttaatcatacgcagaaaca----ttaccatttccaaaacttctccaaaattcacaatttctctc 47502465  T
Q  101 caatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtt 200  Q
    ||||||||||||||  |||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  47502466 caatcttcaccaaaatcatttttacgaattgcaaacaaatcaactgcacattatcacaagtaagttgtatcaatcattttaatgataatgttagtttgtt 47502565  T
Q  201 taggtt 206  Q
    ||||||    
T  47502566 taggtt 47502571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 52802264 - 52802388
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 181  Q
    |||||||||||||||||  ||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52802264 aaaattctcaatttctc--caatcgtcaccaaagttattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 52802361  T
Q  182 atgttaatgttaatttgtttaggttga 208  Q
    ||| |||||||||||||||||||||||    
T  52802362 atgataatgttaatttgtttaggttga 52802388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 81 - 206
Target Start/End: Complemental strand, 23276050 - 23275925
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||| ||||||| |||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  23276050 caaacttctcaaattctttccaatcttcaccaaagtcattttcacgaattgcaagcaaatcaactgcacgttatcacaagtaagttgtatcaatcatttt 23275951  T
Q  181 aatgttaatgttaatttgtttaggtt 206  Q
    |||| |||||||| ||||||||||||    
T  23275950 aatgataatgttagtttgtttaggtt 23275925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 78 - 206
Target Start/End: Original strand, 11183305 - 11183434
Alignment:
Q  78 tttcaaaa-ttctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatca 176  Q
    |||||||| ||||||| |||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  11183305 tttcaaaacttctcaaattctttccaatcttcaccaaagcaattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatta 11183404  T
Q  177 ttttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||| | |||||| ||||||||||||    
T  11183405 ttttaatgattatgttagtttgtttaggtt 11183434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 81 - 206
Target Start/End: Complemental strand, 35258814 - 35258689
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||| ||||||| |||| |||||||||||||||| | ||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  35258814 caaacttctcaaattctttccaatcttcaccaaagctattttcatgaattgcaagcatatcaactgcacattatcacaagtaagttgtatcaatcatttt 35258715  T
Q  181 aatgttaatgttaatttgtttaggtt 206  Q
    |||  |||||||| ||||||||||||    
T  35258714 aataataatgttagtttgtttaggtt 35258689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 45825023 - 45825130
Alignment:
Q  86 ttctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgt 185  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||  ||| ||||||||||||||||||| |||||||||||||||     
T  45825023 ttctcaatttctctccaatcttcaccaaaatcattttcacgaattgccagcaaatcaatcgcatattatcacaagtaagttgtatcaatcattttaatga 45825122  T
Q  186 taatgtta 193  Q
    ||||||||    
T  45825123 taatgtta 45825130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 206
Target Start/End: Original strand, 51320851 - 51320972
Alignment:
Q  87 tctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttg--tgtcaatcattttaatg 184  Q
    |||||| |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||  |   |||||||||||||    
T  51320851 tctcaaattctttccaatcttcaccaaaaccattttcacgaattggaagcaaatcaactgcacattatcacaagtaagttgaataataatcattttaatg 51320950  T
Q  185 ttaatgttaatttgtttaggtt 206  Q
     |||||||| ||||||||||||    
T  51320951 ataatgttagtttgtttaggtt 51320972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 2425628 - 2425528
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||||||| ||| || ||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2425628 caaaattcacaaattttctccaatcttcaccaaatcttctttcacgaattgcaagcaaatcaactgcgcattatcacaagtaagttgtgtcaatcatttt 2425529  T
Q  181 a 181  Q
    |    
T  2425528 a 2425528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 19527409 - 19527358
Alignment:
Q  157 caagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  19527409 caagtaagttgtgtcaatcattttaatgataatgttaatttgtttaagttga 19527358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 13636271 - 13636327
Alignment:
Q  88 ctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaac 144  Q
    ||||||||||||| ||||||| |||||||   ||||||||||||| |||||||||||    
T  13636271 ctcaatttctctcaaatcttcgccaaatcttctttcacgaattgcgagcaaatcaac 13636327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 13633919 - 13633947
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaa 29  Q
    |||||||||||||||||||||||||||||    
T  13633919 aaaacctcggtagttaactgccgaagaaa 13633947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 30890653 - 30890681
Alignment:
Q  174 tcattttaatgttaatgttaatttgttta 202  Q
    |||||||||||||||||||||||||||||    
T  30890653 tcattttaatgttaatgttaatttgttta 30890681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 12 - 208
Target Start/End: Complemental strand, 50216892 - 50216695
Alignment:
Q  12 agttaactgccgaagaaatctagacttaatcattcgcagaaccagaac-ttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcac 110  Q
    |||||||||||||  ||||||  || ||||||| |||||||||||||| || ||||||||||||||  |||||||||| |||||||||||||||||||||    
T  50216892 agttaactgccgagaaaatctgaacataatcatacgcagaaccagaacctttccatttccaaaacatattcaaaattcacaatttctctccaatcttcac 50216793  T
Q  111 caaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  50216792 caaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgataatgtaaatttgtttaggttga 50216695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 60 - 208
Target Start/End: Original strand, 50963064 - 50963212
Alignment:
Q  60 ttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaa 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  50963064 ttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgtacattatcacaa 50963163  T
Q  160 gtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50963164 gtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 50963212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 3501918 - 3501709
Alignment:
Q  1 aaaacctcggtagttaactgcc-gaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctc 98  Q
    |||||||||||||||||||||| || |||||||  || ||| ||   |||||||||||||| |||||||||||||| |  ||| |||||||||||||||     
T  3501918 aaaacctcggtagttaactgcccgaggaaatctgaacataaccagaacgcagaaccagaacctcccatttccaaaaaaccttctaaattctcaatttctt 3501819  T
Q  99 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 198  Q
    | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3501818 ttcaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 3501719  T
Q  199 tttaggttga 208  Q
    ||||||||||    
T  3501718 tttaggttga 3501709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 27 - 208
Target Start/End: Complemental strand, 47074205 - 47074024
Alignment:
Q  27 aaatctagacttaatcattcgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcaccaaatccattttcacg 126  Q
    |||||| ||||||||||||||||||| ||||||||||||||  ||||| ||||||||| ||  |||||||||| ||||||||||||||||||||||||||    
T  47074205 aaatctggacttaatcattcgcagaatcagaacttcccattatcaaaaaaatttcaaatttaacaatttctcttcaatcttcaccaaatccattttcacg 47074106  T
Q  127 aattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47074105 aatagcaagcaaatcaaccgcacattatcacaagtaagttgtgtcaatcattttaatgataatgttaatttgtttaggttga 47074024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 46 - 208
Target Start/End: Original strand, 596854 - 597017
Alignment:
Q  46 cgcagaaccagaacttccca--tttccaaaacaatttcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaa 143  Q
    |||||||||||||||||||   ||||||||||  |  |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  596854 cgcagaaccagaacttccccattttccaaaact-tcacaaaattcacaatttttctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaa 596952  T
Q  144 ctgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
     |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  596953 ttgcacattatcacaagtaagttgtgtcaatcattttaatcataatgttaatttgtttaggttga 597017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 81 - 208
Target Start/End: Original strand, 3975837 - 3975964
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||||||| ||| || ||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3975837 caaaattcacaaattttctccaatcttcaccaaatcttctttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcatttt 3975936  T
Q  181 aatgttaatgttaatttgtttaggttga 208  Q
    ||||||||||||||||||||||||||||    
T  3975937 aatgttaatgttaatttgtttaggttga 3975964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 42165213 - 42165421
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccattt-ccaaaacaatttcaaaattctcaatttctc 98  Q
    |||||||||||||||||||||||| |||||||  ||| || ||   ||||||||||||  | ||||||| |||||||  |  |||||||| ||| || ||    
T  42165213 aaaacctcggtagttaactgccgaggaaatctgaactaaaccagaacgcagaaccagacttccccattttccaaaact-tcacaaaattcacaaattttc 42165311  T
Q  99 tccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttg 198  Q
    |||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  42165312 tccaatcttcaccaaatattctttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtccatcattttaatcataatgttaatttg 42165411  T
Q  199 tttaggttga 208  Q
    ||||||||||    
T  42165412 tttaggttga 42165421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 82 - 206
Target Start/End: Complemental strand, 49196388 - 49196264
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 181  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||    
T  49196388 aaaattctcaatttctctctaatcttcaccaaagtcattttcacgaattgcaagaaaatcaactgcacattatcacaagtaagttgtatcaatcacttta 49196289  T
Q  182 atgttaatgttaatttgtttaggtt 206  Q
    ||| |||||||| ||||||||||||    
T  49196288 atgataatgttagtttgtttaggtt 49196264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 4008265 - 4008138
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||||||| ||| || ||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4008265 caaaattcacaaattttctccaatcttcaccaaatcttctttcacgaatagcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 4008166  T
Q  181 aatgttaatgttaatttgtttaggttga 208  Q
    |||  |||||||||||||||||||||||    
T  4008165 aatcataatgttaatttgtttaggttga 4008138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 81 - 202
Target Start/End: Original strand, 48888867 - 48888988
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||| ||||||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48888867 caaacttctcaaattctttccaatcttcaccaaagtcattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcatttt 48888966  T
Q  181 aatgttaatgttaatttgttta 202  Q
    |||| |||||||| ||||||||    
T  48888967 aatgataatgttagtttgttta 48888988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 82 - 206
Target Start/End: Complemental strand, 20917957 - 20917834
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 181  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |||    
T  20917957 aaaattctcaatttctctccaatcttcaccaaagccattttcacgaattgcaagcaaatcaatcgcacattatcacaagtaagttgtatcaatcatctta 20917858  T
Q  182 atgttaatgttaatttgtttaggtt 206  Q
    ||| | |||||| ||||||||||||    
T  20917857 atgat-atgttagtttgtttaggtt 20917834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 82 - 206
Target Start/End: Complemental strand, 20926919 - 20926796
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttta 181  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |||    
T  20926919 aaaattctcaatttctctccaatcttcaccaaagccattttcacgaattgcaagcaaatcaatcgcacattatcacaagtaagttgtatcaatcatctta 20926820  T
Q  182 atgttaatgttaatttgtttaggtt 206  Q
    ||| | |||||| ||||||||||||    
T  20926819 atgat-atgttagtttgtttaggtt 20926796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 86 - 206
Target Start/End: Complemental strand, 30255939 - 30255819
Alignment:
Q  86 ttctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgt 185  Q
    ||||||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  30255939 ttctcaaattctttccaatcttcaccaaagtcattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcattttaatga 30255840  T
Q  186 taatgttaatttgtttaggtt 206  Q
    ||| |||| ||||||||||||    
T  30255839 taaggttagtttgtttaggtt 30255819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 37 - 206
Target Start/End: Original strand, 51807054 - 51807225
Alignment:
Q  37 ttaatcattcgcagaaccagaac--ttcccatttccaaaacaatttcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaa 134  Q
    |||||||| ||||||| |||||   || |||||||||||||   | |||||||| |||||||||||||||||||||||||   |||||||| ||||||||    
T  51807054 ttaatcatacgcagaaacagaaacattaccatttccaaaacttctccaaaattcacaatttctctccaatcttcaccaaagttattttcacaaattgcaa 51807153  T
Q  135 gcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||| | ||||||||||||    
T  51807154 gcaaatcaactgtacattatcacaagtaagttgtatcaatcattttaatgataatgtcagtttgtttaggtt 51807225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 42756289 - 42756409
Alignment:
Q  86 ttctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgt 185  Q
    ||||||| |||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||      
T  42756289 ttctcaaattctttccaatcttcaccaaagtcattttcacgaattgcaagcaaatcaactgcacattatcacaagtcagttgtatcaatcattttaataa 42756388  T
Q  186 taatgttaatttgtttaggtt 206  Q
    |||||||| ||||||||||||    
T  42756389 taatgttagtttgtttaggtt 42756409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 79 - 206
Target Start/End: Original strand, 48563071 - 48563198
Alignment:
Q  79 ttcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatt 178  Q
    |||||| ||||||| |||| | ||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  48563071 ttcaaacttctcaaattcttttcaatcttcatcaaaatcattttcacaaattgcaagcaaatcaactgcacattatcataagtaagttgtatcaatcatt 48563170  T
Q  179 ttaatgttaatgttaatttgtttaggtt 206  Q
    |||||| |||||||| ||||||||||||    
T  48563171 ttaatgataatgttagtttgtttaggtt 48563198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 44229881 - 44229971
Alignment:
Q  116 ccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  44229881 ccattttcacgaattgcaagcaaatcaattgcacattatcacaagtaagttgtatcaatcattttaatgataatgttagtttgtttaggtt 44229971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 42807572 - 42807498
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatca 156  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  42807572 aaaattctcaatttctctccaatcttcaccaaagccattttcacaaattgcaagcaaatcaaccgcacattatca 42807498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 2647828 - 2647891
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaac 144  Q
    |||||||||||||||||||||||||||| |||||||   |||||||||||||||||||||||||    
T  2647828 caaaattctcaatttctctccaatcttcgccaaatcttctttcacgaattgcaagcaaatcaac 2647891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 44227246 - 44227278
Alignment:
Q  82 aaaattctcaatttctctccaatcttcaccaaa 114  Q
    |||||||||||||||||||||||||||||||||    
T  44227246 aaaattctcaatttctctccaatcttcaccaaa 44227278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 49268868 - 49268817
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaa 52  Q
    ||||| ||||||||||||||||||||||||||  | |||||||| |||||||    
T  49268868 aaaacatcggtagttaactgccgaagaaatctgaatttaatcatacgcagaa 49268817  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 2267106 - 2267134
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaa 29  Q
    |||||||||||||||||||||||||||||    
T  2267106 aaaacctcggtagttaactgccgaagaaa 2267134  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 50998677 - 50998649
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaa 29  Q
    |||||||||||||||||||||||||||||    
T  50998677 aaaacctcggtagttaactgccgaagaaa 50998649  T

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Target: scaffold0101 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 51 - 202
Target Start/End: Complemental strand, 41007 - 40855
Alignment:
Q  51 aaccagaacttcccatttccaaaacaat-ttcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcac 149  Q
    ||||||||| |||||||| ||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41007 aaccagaacctcccatttacaaaaaaacattcaaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaagtgcac 40908  T
Q  150 attatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttta 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40907 attatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgttta 40855  T

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Target: scaffold0101; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 36676 - 36739
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaac 144  Q
    |||||||||||||||||||| ||||| | |||||||   ||||||||||||| |||||||||||    
T  36676 caaaattctcaatttctctcaaatctccgccaaatcttctttcacgaattgcgagcaaatcaac 36739  T

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Target: scaffold0293 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 745 - 556
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcatt-cgcagaaccagaacttcccatttccaaaacaatttcaaaattctcaatttctct 99  Q
    |||||||||||||||||||||||| |||| || ||| ||| |||  ||||||||||||||||| ||||||||||||  ||||||| ||  ||||||||||    
T  745 aaaacctcggtagttaactgccgaggaaaactggacataaccataacgcagaaccagaacttctcatttccaaaactttttcaaatttaacaatttctct 646  T
Q  100 ccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaat 189  Q
    | ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  645 caaatcttctccaaatccattttcacgaattgcaagcaaatcaagtgcacattatcacaagtaagttgtgtcaatcattttaatgttaat 556  T

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Target: scaffold0180 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 15564 - 15437
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||||||| ||| || ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15564 caaaattcacaaattttctccaatcttcaccaaatcttctttcacgaattgcaagcaaatcaactgcacattatcataagtaagttgtgtcaatcatttt 15465  T
Q  181 aatgttaatgttaatttgtttaggttga 208  Q
    |||  |||||||||||||||||||||||    
T  15464 aatcataatgttaatttgtttaggttga 15437  T

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Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 6320470 - 6320371
Alignment:
Q  81 caaaattctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcatttt 180  Q
    |||| ||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6320470 caaacttctcaaattctttccaatcttcaccaaagccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtatcaatcatttt 6320371  T

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Target: chr6; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 24088722 - 24088601
Alignment:
Q  85 attctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatg 184  Q
    |||||||||||||||||||| ||||  |||   ||||||||||||||||||||||||||| ||| |||||||||| |||||||| |||||||||||||||    
T  24088722 attctcaatttctctccaattttcattaaagttattttcacgaattgcaagcaaatcaaccgcaaattatcacaaataagttgtatcaatcattttaatg 24088623  T
Q  185 ttaatgttaatttgtttaggtt 206  Q
     |||||||| ||||||||||||    
T  24088622 ataatgttagtttgtttaggtt 24088601  T

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Target: chr6; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 31768861 - 31768958
Alignment:
Q  111 caaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggttga 208  Q
    ||||||||||||||  ||||||||||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31768861 caaatccattttcataaattgcaagcaaatagattgcacattatcacaagtaagttgtgtcaatcattttaatgataatgttaatttgtttaggttga 31768958  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 206
Target Start/End: Original strand, 3380939 - 3381030
Alignment:
Q  115 tccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaatttgtttaggtt 206  Q
    |||||||||||| |||| |||| ||||| |  |||||||||||||||||||    | |||||||  ||| ||||||||||||||||||||||    
T  3380939 tccattttcacggattgtaagccaatcatccccacattatcacaagtaagtaccattaatcattgcaattttaatgttaatttgtttaggtt 3381030  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 21600751 - 21600809
Alignment:
Q  107 tcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagt 165  Q
    ||||||||||||||||||||| |||||| | ||||| |  |||||||||||||||||||    
T  21600751 tcaccaaatccattttcacgatttgcaaaccaatcatcgccacattatcacaagtaagt 21600809  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 31768803 - 31768861
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatctagacttaatcattcgcagaaccagaac 59  Q
    |||||||||||||||||||||||| |||||||  || ||||||| | ||||||||||||    
T  31768803 aaaacctcggtagttaactgccgaggaaatctgaacataatcatacacagaaccagaac 31768861  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 22305032 - 22304976
Alignment:
Q  88 ctcaatttctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaac 144  Q
    ||||||||||||| ||||||| |||||||   ||||||||||||| |||||||||||    
T  22305032 ctcaatttctctcaaatcttcgccaaatcttctttcacgaattgcgagcaaatcaac 22304976  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 18351666 - 18351635
Alignment:
Q  1 aaaacctcggtagttaactgccgaagaaatct 32  Q
    ||||||||||||||||||||||||||||||||    
T  18351666 aaaacctcggtagttaactgccgaagaaatct 18351635  T

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Target: scaffold0155 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 95 - 206
Target Start/End: Original strand, 8349 - 8460
Alignment:
Q  95 tctctccaatcttcaccaaatccattttcacgaattgcaagcaaatcaactgcacattatcacaagtaagttgtgtcaatcattttaatgttaatgttaa 194  Q
    ||||||||||  |||||||| || ||||| ||||||||||||||||||||  |||||||||||||||||||||  ||||| ||||||||| ||||||||     
T  8349 tctctccaattctcaccaaagccgttttcgcgaattgcaagcaaatcaaccacacattatcacaagtaagttgcatcaattattttaatgataatgttag 8448  T
Q  195 tttgtttaggtt 206  Q
    ||||||||||||    
T  8449 tttgtttaggtt 8460  T

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