View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13604_low_6 (Length: 249)
Name: NF13604_low_6
Description: NF13604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13604_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 2760245 - 2760350
Alignment:
| Q |
17 |
taaaaatgaaaaggaagagtaacccgatgcagtcgacgcatgtgttgtctgatagnnnnnnnnnnnntgctatgtcaatgaaaaggaatgtaatgtataa |
116 |
Q |
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| T |
2760245 |
taaaaatgaaaaggaagagtaacccgatgcagtcgacgcatgtgttatctgatagaaaaagaaaaaaagctatgtcaatgaaaaggaatgtaatgtataa |
2760344 |
T |
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| Q |
117 |
caagaa |
122 |
Q |
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|||||| |
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| T |
2760345 |
caagaa |
2760350 |
T |
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