View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13605_low_6 (Length: 399)
Name: NF13605_low_6
Description: NF13605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13605_low_6 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 308; Significance: 1e-173; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 35106883 - 35107214
Alignment:
| Q |
1 |
agctcatgtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35106883 |
agctcatgtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaac |
35106982 |
T |
 |
| Q |
101 |
gttgaaaaagaagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35106983 |
tttgaaaaagaagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatc |
35107082 |
T |
 |
| Q |
201 |
aagtgaaagctgcaatggagaatggtgttctcactgtcactgtccctaaggaagagatcaagaagcctgaaatcaaagccattgaaatctctggtt-aac |
299 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |
|
|
| T |
35107083 |
aagtgaaagctgctatggagaatggtgttctcgctgtcactgtccctaaggaagagatcaagaagcctgaagtcaaagccattgaaatctctggttaaac |
35107182 |
T |
 |
| Q |
300 |
tcagaacaagctttgttactcgtcttttgttt |
331 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
35107183 |
tcagaacaagctttgttactcgtcttttgttt |
35107214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 35072977 - 35072682
Alignment:
| Q |
1 |
agctcatgtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35072977 |
agctcatgtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaac |
35072878 |
T |
 |
| Q |
101 |
gttgaaaaagaagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
35072877 |
attgaaaaagaagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagataaccagagaatgcgaaaatggatc |
35072778 |
T |
 |
| Q |
201 |
aagtgaaagctgcaatggagaatggtgttctcactgtcactgtccctaaggaagagatcaagaagcctgaaatcaaagccattgaaatctctggtt |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||| || || ||||| | ||||| ||||| | || |||| ||||||||||||| |
|
|
| T |
35072777 |
aagtgaaagctgcaatggagaatggtgttctcactgttactgttccaaaagaagaagttaagaaacctgatgttaagtccatcgaaatctctggtt |
35072682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 5 - 296
Target Start/End: Original strand, 35097709 - 35098000
Alignment:
| Q |
5 |
catgtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttg |
104 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
35097709 |
catgtgttcgaggctgatcttcctggactgaagaaggaagaagtgaaggttgaaattgaaggtgatagggttcttcagataagcggagagaggaatgttg |
35097808 |
T |
 |
| Q |
105 |
aaaaagaagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatcaagt |
204 |
Q |
| |
|
| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||| ||||| |
|
|
| T |
35097809 |
agaaagaagataagaacgatcaatggcatcgtgtggagcgtagcagtgggaaattcatgaggaggttcagattgcctgagaatgcgaaaatggaccaagt |
35097908 |
T |
 |
| Q |
205 |
gaaagctgcaatggagaatggtgttctcactgtcactgtccctaaggaagagatcaagaagcctgaaatcaaagccattgaaatctctggtt |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| || || |||||||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
35097909 |
gaaagctgcaatggagaatggtgttctcactgttactgttccaaaagaagagatcaagaagcctgatgttaagtccattgaaatctctggtt |
35098000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 44 - 296
Target Start/End: Original strand, 35098037 - 35098289
Alignment:
| Q |
44 |
gaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttgaaaaagaagataagaatgatcaatggcatcgtgtggagc |
143 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
35098037 |
gaagtgaaggttgaaattgaaggtgatagggttcttcagataagcggagagaggaatgttgagaaagaagataagaacgatcaatggcatcgtgtggagc |
35098136 |
T |
 |
| Q |
144 |
gtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatcaagtgaaagctgcaatggagaatggtgttctcactgtcactgt |
243 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
35098137 |
gtagcagtgggaaattcatgaggaggttcagattgcctgagaatgcgaaaatggaccaagtgaaagctgcaatggagaatggtgttctcactgttactgt |
35098236 |
T |
 |
| Q |
244 |
ccctaaggaagagatcaagaagcctgaaatcaaagccattgaaatctctggtt |
296 |
Q |
| |
|
|| || |||||||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
35098237 |
tccaaaagaagagatcaagaagcctgatgttaagtccattgaaatctctggtt |
35098289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 36296743 - 36296508
Alignment:
| Q |
8 |
gtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttgaaa |
107 |
Q |
| |
|
||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| || || |||||||||||||| | |
|
|
| T |
36296743 |
gtgtttaaagctgatcttcctggactgaagaaggaagaagtgaaggttgaaattgaagatgacagagttcttcagattagtggagagaggaacgttgaga |
36296644 |
T |
 |
| Q |
108 |
aagaagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatcaagtgaa |
207 |
Q |
| |
|
||||||| ||||| | ||||||||||| |||||||||||||||||||| || ||||||||||| ||||| || || ||||| || |||||||| ||||| |
|
|
| T |
36296643 |
aagaagacaagaacaaccaatggcatcgcgtggagcgtagcagtggaaagtttatgaggaggttcagattgcccgaaaatgccaagatggatcaggtgaa |
36296544 |
T |
 |
| Q |
208 |
agctgcaatggagaatggtgttctcactgtcactgt |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |
|
|
| T |
36296543 |
agctgcaatggagaatggtgttctcactgtaactgt |
36296508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 8 - 295
Target Start/End: Complemental strand, 36940765 - 36940478
Alignment:
| Q |
8 |
gtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttgaaa |
107 |
Q |
| |
|
|||||||| |||||| |||| ||| ||||||||||||||| ||| || || ||||||||||||||||||||||||||||| || | || | |||||| | |
|
|
| T |
36940765 |
gtgttcaatgctgattttccaggaatgaagaaggaggaagcgaaagtagagattgaagatgatagggttcttcagataagtggaaaaagaagcgttgaga |
36940666 |
T |
 |
| Q |
108 |
aagaagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatcaagtgaa |
207 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||||| || ||||| || |||||||| |||||||||||| |||| |
|
|
| T |
36940665 |
aagaagataagaacgatcaatggcatcccgtggagcgtagcagtgggaagttcatgaggagattaagattgcctgagaatgctaaaatggatcaaatgaa |
36940566 |
T |
 |
| Q |
208 |
agctgcaatggagaatggtgttctcactgtcactgtccctaaggaagagatcaagaagcctgaaatcaaagccattgaaatctctggt |
295 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||||| ||||||||||||| | |||| | ||| ||||||| ||||||||| |
|
|
| T |
36940565 |
agctgcaatggagaatggcattctcactgtcactgtgcctaaaaaagagatcaagaatcatgaagttaaaaccattgatatctctggt |
36940478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 49 - 255
Target Start/End: Original strand, 36961300 - 36961507
Alignment:
| Q |
49 |
gaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttgaaaaagaagataagaatgatcaatggcatcgtgtggagcgtagc |
148 |
Q |
| |
|
|||||| || ||||||| |||||||||||||||||| ||||| ||||| | |||||| |||||||||||||| || |||||||| | ||||||| |||| |
|
|
| T |
36961300 |
gaaggtagagattgaagttgatagggttcttcagatcagcggagagagaagcgttgagaaagaagataagaacaatgaatggcattgcgtggagcttagc |
36961399 |
T |
 |
| Q |
149 |
agtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatcaagtgaaagc-tgcaatggagaatggtgttctcactgtcactgtccct |
247 |
Q |
| |
|
||||| ||||||||||||| ||||||||| |||||||||| || |||||||| ||||| || || ||||||||||||||||||||| ||| | ||| |
|
|
| T |
36961400 |
agtgggaaattcatgaggaagtttagattggcagagaatgctaagatggatcaggtgaatgcaaacatgggagaatggtgttctcactgtaactattcct |
36961499 |
T |
 |
| Q |
248 |
aaggaaga |
255 |
Q |
| |
|
|||||||| |
|
|
| T |
36961500 |
aaggaaga |
36961507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 36936069 - 36935979
Alignment:
| Q |
6 |
atgtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagag |
96 |
Q |
| |
|
||||||||||||| |||||||| ||| ||||||||||||||||||| || || ||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
36936069 |
atgtgttcaaggcggatcttccaggaatgaagaaggaggaagtgaaagtagagattgaagatgatatggttcttcagataagcggagagag |
36935979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 297
Target Start/End: Complemental strand, 36935974 - 36935858
Alignment:
| Q |
182 |
gagaatgcgaaaatggatcaagtgaaagctgcaa-tggagaatggtgttctcactgtcactgtccctaaggaagagatcaagaagcctgaaatcaaagcc |
280 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| || || || | |||||| | |||||||||||| | || || |
|
|
| T |
36935974 |
gagaatgctaaaatggatcaagtgaaagctgcaattggagaatggtgttctcactgttaccgtgccacaagaagaggttaagaagcctgaagtgaagacc |
36935875 |
T |
 |
| Q |
281 |
attgaaatctctggtta |
297 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
36935874 |
attgatatctctggtta |
36935858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 35107235 - 35107275
Alignment:
| Q |
330 |
ttgttttgtaatgcttactttgtttgtgatgtctgtgcaag |
370 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35107235 |
ttgttttgtaatgcttactttgtttgtgatgtctgtgcaag |
35107275 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 35072133 - 35071965
Alignment:
| Q |
5 |
catgtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttg |
104 |
Q |
| |
|
||||| ||||| |||||| | || || ||||| || ||||||||||| ||||| ||||||||| || || |||||||||| || ||||||| | | | |
|
|
| T |
35072133 |
catgtattcaaagctgatgtaccagggctgaacaaagaggaagtgaaagttgaggttgaagatggaagagtgcttcagataacaggagagaggagcatgg |
35072034 |
T |
 |
| Q |
105 |
aaaaagaagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggttta |
173 |
Q |
| |
|
| | | |||||| |||||| ||| || ||||| |||||||| ||||| |||||||||||||| |||| |
|
|
| T |
35072033 |
agagacaagatacaaatgatggatgtcagcgtgttgagcgtagtagtggtaaattcatgaggagtttta |
35071965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 36953768 - 36953720
Alignment:
| Q |
171 |
ttagattaccagagaatgcgaaaatggatcaagtgaaagctgcaatgga |
219 |
Q |
| |
|
||||||| || || ||||| |||| |||||||||||||||||||||||| |
|
|
| T |
36953768 |
ttagattgcctgacaatgctaaaacggatcaagtgaaagctgcaatgga |
36953720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 250; Significance: 1e-139; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 5 - 298
Target Start/End: Complemental strand, 24041029 - 24040736
Alignment:
| Q |
5 |
catgtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttg |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24041029 |
catgtgttcaaggctgatcttcctggactgaagaaggaagaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttg |
24040930 |
T |
 |
| Q |
105 |
aaaaagaagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatcaagt |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24040929 |
aaaaagaagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatcaagt |
24040830 |
T |
 |
| Q |
205 |
gaaagctgcaatggagaatggtgttctcactgtcactgtccctaaggaagagatcaagaagcctgaaatcaaagccattgaaatctctggttaa |
298 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||| || | || ||||||| |||||||||||| |
|
|
| T |
24040829 |
gaaagctgcaatggagaatggtattctcactgtcactgtccctaaggaagaagttaagaagcctcaagtgaagaccattgatatctctggttaa |
24040736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 5 - 296
Target Start/End: Complemental strand, 24014472 - 24014181
Alignment:
| Q |
5 |
catgtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttg |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
24014472 |
catgtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaaggtgatagggttcttcagataagcggagagaggaatgttg |
24014373 |
T |
 |
| Q |
105 |
aaaaagaagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatcaagt |
204 |
Q |
| |
|
| |||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||| || || || || || |||||||||||||||||||| |
|
|
| T |
24014372 |
agaaagaagataagaacgatcaatggcatcgtgtggagcgcagcagcggaaagttcatgaggagattcaggttgcccgaaaatgcgaaaatggatcaagt |
24014273 |
T |
 |
| Q |
205 |
gaaagctgcaatggagaatggtgttctcactgtcactgtccctaaggaagagatcaagaagcctgaaatcaaagccattgaaatctctggtt |
296 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| || || ||||| | ||||| ||||| | || |||| ||||||||||||| |
|
|
| T |
24014272 |
gaaagctgcaatggagaatggtgttctcactgttactgttccaaaagaagaagttaagaaacctgatgttaagtccatcgaaatctctggtt |
24014181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 3123100 - 3123225
Alignment:
| Q |
5 |
catgtgttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttg |
104 |
Q |
| |
|
||||||||||| ||||||||||| || |||||||||| || ||||||||||||||||||||||||| |||||||||||||||||| || |||| ||||| |
|
|
| T |
3123100 |
catgtgttcaaagctgatcttccagggttgaagaaggaagaggtgaaggttgaaattgaagatgataaggttcttcagataagcggagaaaggaccgttg |
3123199 |
T |
 |
| Q |
105 |
aaaaagaagataagaatgatcaatgg |
130 |
Q |
| |
|
| |||||||| ||||| |||| |||| |
|
|
| T |
3123200 |
agaaagaagacaagaacgatcgatgg |
3123225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 255
Target Start/End: Original strand, 34919000 - 34919235
Alignment:
| Q |
20 |
gatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttgaaaaagaagataaga |
119 |
Q |
| |
|
||||||||||| ||||||| || |||||||| |||||||| ||||||| | || | |||||||| |||||||| ||| || | ||||| ||| |
|
|
| T |
34919000 |
gatcttcctggtttgaagaaagaagaagtgaaagttgaaatagaagatggaaatgtgttgcagataagtggtgagagaaacaaagagcaggaagagaagg |
34919099 |
T |
 |
| Q |
120 |
atgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatcaagtgaaagctgcaatgga |
219 |
Q |
| |
|
||||| | ||||||||||| ||| | || ||| || || |||||||||||||| || || ||||||| ||||||||||| || ||||||| ||||| |
|
|
| T |
34919100 |
atgataagtggcatcgtgttgagagaagttctgggaagtttatgaggaggtttaggttgcctgagaatgttaaaatggatcaggttaaagctggtatgga |
34919199 |
T |
 |
| Q |
220 |
gaatggtgttctcactgtcactgtccctaaggaaga |
255 |
Q |
| |
|
|||||| ||||| ||||| ||||| ||||||||||| |
|
|
| T |
34919200 |
gaatggggttcttactgttactgttcctaaggaaga |
34919235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 270
Target Start/End: Original strand, 26578990 - 26579249
Alignment:
| Q |
11 |
ttcaaggctgatcttcctggactgaagaaggaggaagtgaaggttgaaattgaagatgatagggttcttcagataagcggtgagaggaacgttgaaaaag |
110 |
Q |
| |
|
||||| || |||||||| || ||||||||||||||||||||||||| |||||||| ||| | ||| | ||||||| || |||||||| |||| || | |
|
|
| T |
26578990 |
ttcaaagccgatcttcccggcgtgaagaaggaggaagtgaaggttgagattgaagaggatcgtgttttgaagataagtggagagaggaaaattgagaagg |
26579089 |
T |
 |
| Q |
111 |
aagataagaatgatcaatggcatcgtgtggagcgtagcagtggaaaattcatgaggaggtttagattaccagagaatgcgaaaatggatcaagtgaaagc |
210 |
Q |
| |
|
|||| ||||||||| |||||||| || || || ||| |||| || | || ||||||| || || |||||||| || ||||| | |||||||| |
|
|
| T |
26579090 |
aagacaagaatgatacctggcatcgcgttgaacgaagccagggaagttttctccggcggtttaggttgccggagaatgctaaggtggatgaggtgaaagc |
26579189 |
T |
 |
| Q |
211 |
tgcaatggagaatggtgttctcactgtcactgtccctaaggaagagatcaagaagcctga |
270 |
Q |
| |
|
|| |||||||||||||| || ||||| | ||| ||||||| ||| | ||||||||||| |
|
|
| T |
26579190 |
tgggatggagaatggtgtgcttactgttagtgttcctaaggtggaggttaagaagcctga |
26579249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University