View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13606_low_3 (Length: 433)

Name: NF13606_low_3
Description: NF13606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13606_low_3
NF13606_low_3
[»] chr3 (66 HSPs)
chr3 (1-414)||(9606883-9607300)
chr3 (292-412)||(40272874-40272994)
chr3 (293-414)||(13730664-13730785)
chr3 (292-414)||(8247749-8247871)
chr3 (293-414)||(46421097-46421218)
chr3 (294-414)||(29366782-29366902)
chr3 (293-412)||(4495726-4495845)
chr3 (292-414)||(13628852-13628975)
chr3 (292-412)||(1217065-1217183)
chr3 (293-412)||(12914097-12914216)
chr3 (292-412)||(7696949-7697067)
chr3 (293-401)||(10870025-10870132)
chr3 (292-412)||(16735416-16735535)
chr3 (292-413)||(26573103-26573223)
chr3 (292-412)||(22609742-22609860)
chr3 (293-412)||(6411884-6412002)
chr3 (306-412)||(26869696-26869801)
chr3 (292-412)||(39203491-39203609)
chr3 (293-412)||(52926281-52926391)
chr3 (302-412)||(34420706-34420815)
chr3 (292-413)||(45620889-45621010)
chr3 (328-410)||(54032623-54032705)
chr3 (297-412)||(22122979-22123092)
chr3 (291-399)||(12525384-12525489)
chr3 (292-412)||(5173783-5173903)
chr3 (302-413)||(45948899-45949012)
chr3 (302-412)||(53996628-53996737)
chr3 (1-78)||(9601463-9601539)
chr3 (349-414)||(14986989-14987054)
chr3 (328-412)||(516420-516504)
chr3 (322-412)||(54374408-54374498)
chr3 (320-408)||(7942993-7943081)
chr3 (328-412)||(45139540-45139624)
chr3 (349-412)||(10795487-10795550)
chr3 (319-413)||(30928208-30928302)
chr3 (296-409)||(21874999-21875106)
chr3 (294-409)||(25517235-25517353)
chr3 (302-389)||(35417902-35417988)
chr3 (302-412)||(25944455-25944564)
chr3 (360-414)||(49013535-49013589)
chr3 (296-412)||(26782345-26782461)
chr3 (349-412)||(31592881-31592942)
chr3 (328-411)||(33926094-33926176)
chr3 (349-412)||(9276290-9276359)
chr3 (330-408)||(39212003-39212081)
chr3 (363-412)||(45786278-45786327)
chr3 (340-412)||(52428539-52428612)
chr3 (315-391)||(53062036-53062112)
chr3 (348-412)||(55401207-55401271)
chr3 (315-410)||(19731000-19731095)
chr3 (335-412)||(8410929-8411004)
chr3 (377-414)||(353411-353448)
chr3 (357-412)||(54484730-54484786)
chr3 (340-410)||(19751601-19751671)
chr3 (363-412)||(47624088-47624136)
chr3 (340-412)||(1121287-1121359)
chr3 (292-332)||(9276249-9276289)
chr3 (344-412)||(29106576-29106644)
chr3 (356-412)||(31904919-31904975)
chr3 (350-412)||(43114930-43114994)
chr3 (381-412)||(15797284-15797315)
chr3 (296-335)||(23871418-23871457)
chr3 (300-409)||(33235513-33235624)
chr3 (381-412)||(34771426-34771457)
chr3 (302-412)||(21330308-21330418)
chr3 (355-411)||(50625016-50625072)
[»] chr7 (64 HSPs)
chr7 (293-414)||(46354148-46354269)
chr7 (292-414)||(42805477-42805599)
chr7 (292-412)||(2541081-2541202)
chr7 (293-414)||(47716413-47716534)
chr7 (293-412)||(21172071-21172188)
chr7 (293-412)||(42798623-42798742)
chr7 (293-414)||(43557426-43557547)
chr7 (300-412)||(11617650-11617762)
chr7 (292-412)||(32758214-32758332)
chr7 (292-412)||(48735184-48735303)
chr7 (292-412)||(12473257-12473377)
chr7 (304-412)||(19426951-19427059)
chr7 (293-412)||(22699032-22699151)
chr7 (301-412)||(27629596-27629707)
chr7 (300-412)||(10693135-10693245)
chr7 (294-397)||(18326989-18327091)
chr7 (292-410)||(35334880-35334996)
chr7 (292-412)||(34626270-34626389)
chr7 (297-412)||(14732885-14732999)
chr7 (313-412)||(33871972-33872070)
chr7 (294-412)||(5180219-5180337)
chr7 (302-412)||(23419736-23419845)
chr7 (292-394)||(42495916-42496017)
chr7 (293-412)||(2662997-2663112)
chr7 (315-412)||(16341254-16341351)
chr7 (293-382)||(47077945-47078034)
chr7 (293-397)||(7193039-7193143)
chr7 (299-414)||(1423970-1424085)
chr7 (294-412)||(8149007-8149126)
chr7 (302-412)||(19266414-19266523)
chr7 (302-412)||(28362207-28362316)
chr7 (302-412)||(48123546-48123655)
chr7 (298-396)||(7794582-7794682)
chr7 (299-412)||(40463837-40463949)
chr7 (292-412)||(42476826-42476944)
chr7 (340-412)||(7879639-7879711)
chr7 (293-385)||(21447544-21447636)
chr7 (315-412)||(29907393-29907492)
chr7 (321-412)||(42391162-42391251)
chr7 (314-412)||(7644931-7645029)
chr7 (315-412)||(14099068-14099165)
chr7 (315-412)||(14409085-14409182)
chr7 (302-403)||(42101956-42102056)
chr7 (304-412)||(19265781-19265887)
chr7 (292-412)||(28078194-28078313)
chr7 (293-412)||(13805057-13805174)
chr7 (340-410)||(18512517-18512586)
chr7 (302-412)||(3469239-3469350)
chr7 (296-396)||(29140438-29140538)
chr7 (340-412)||(35203440-35203512)
chr7 (330-412)||(38262258-38262340)
chr7 (340-408)||(31591175-31591241)
chr7 (335-412)||(32233197-32233273)
chr7 (292-396)||(5814424-5814528)
chr7 (316-412)||(6736867-6736962)
chr7 (318-412)||(11741774-11741866)
chr7 (335-413)||(18747482-18747561)
chr7 (358-412)||(38604546-38604599)
chr7 (351-408)||(1408469-1408526)
chr7 (343-412)||(21566439-21566508)
chr7 (343-408)||(43852047-43852111)
chr7 (354-397)||(27697452-27697495)
chr7 (305-412)||(39123857-39123966)
chr7 (294-343)||(45019007-45019056)
[»] chr8 (49 HSPs)
chr8 (293-414)||(7136589-7136710)
chr8 (292-412)||(36720749-36720869)
chr8 (292-410)||(28817690-28817808)
chr8 (293-412)||(44530103-44530222)
chr8 (292-414)||(39461056-39461178)
chr8 (293-412)||(29521747-29521866)
chr8 (293-412)||(35261633-35261752)
chr8 (293-412)||(12670312-12670429)
chr8 (292-414)||(6760776-6760897)
chr8 (291-412)||(13160654-13160774)
chr8 (292-414)||(25250475-25250597)
chr8 (292-412)||(30454159-30454277)
chr8 (293-412)||(20869560-20869677)
chr8 (293-414)||(26954086-26954208)
chr8 (292-412)||(2626472-2626595)
chr8 (292-412)||(17823529-17823649)
chr8 (292-412)||(18164822-18164941)
chr8 (293-412)||(45071219-45071337)
chr8 (297-414)||(20284131-20284250)
chr8 (298-412)||(8897826-8897940)
chr8 (297-414)||(21070759-21070879)
chr8 (302-412)||(44781568-44781677)
chr8 (302-395)||(28407379-28407471)
chr8 (315-413)||(22598133-22598231)
chr8 (308-412)||(12625858-12625963)
chr8 (349-413)||(8483999-8484063)
chr8 (293-366)||(24245405-24245478)
chr8 (318-411)||(35105902-35105995)
chr8 (290-409)||(40604970-40605089)
chr8 (294-412)||(44742581-44742698)
chr8 (340-412)||(389644-389718)
chr8 (349-412)||(5135351-5135414)
chr8 (302-412)||(42083761-42083870)
chr8 (357-414)||(20869941-20869998)
chr8 (316-412)||(24365121-24365218)
chr8 (350-414)||(17250937-17251001)
chr8 (356-412)||(29877111-29877167)
chr8 (302-409)||(14018034-14018140)
chr8 (317-412)||(36918102-36918197)
chr8 (302-400)||(30962847-30962944)
chr8 (349-412)||(5689641-5689704)
chr8 (321-408)||(31457155-31457241)
chr8 (377-414)||(16225057-16225094)
chr8 (292-333)||(23286434-23286475)
chr8 (363-412)||(43942348-43942397)
chr8 (379-413)||(10857869-10857903)
chr8 (315-412)||(11001011-11001109)
chr8 (328-412)||(23000281-23000362)
chr8 (293-326)||(42840863-42840896)
[»] chr5 (44 HSPs)
chr5 (291-414)||(38879533-38879656)
chr5 (296-414)||(4619166-4619284)
chr5 (292-412)||(41014272-41014391)
chr5 (293-412)||(24448844-24448963)
chr5 (296-414)||(27328709-27328827)
chr5 (296-412)||(43334159-43334276)
chr5 (293-412)||(35710267-35710384)
chr5 (292-399)||(23974734-23974840)
chr5 (292-412)||(22600407-22600527)
chr5 (292-404)||(37024626-37024736)
chr5 (293-412)||(1565385-1565505)
chr5 (293-412)||(8170046-8170163)
chr5 (292-412)||(22187238-22187358)
chr5 (302-412)||(39301087-39301196)
chr5 (349-414)||(13801829-13801894)
chr5 (328-412)||(32703413-32703495)
chr5 (294-412)||(2838733-2838851)
chr5 (304-414)||(12006390-12006500)
chr5 (302-412)||(208990-209098)
chr5 (302-412)||(19143005-19143113)
chr5 (315-408)||(28516500-28516593)
chr5 (335-412)||(42924896-42924973)
chr5 (322-412)||(1405170-1405260)
chr5 (343-413)||(41425952-41426022)
chr5 (350-412)||(43574617-43574679)
chr5 (358-414)||(20135623-20135679)
chr5 (335-397)||(22025539-22025601)
chr5 (299-409)||(30006285-30006395)
chr5 (354-413)||(7368413-7368470)
chr5 (364-412)||(16880709-16880757)
chr5 (290-382)||(22861758-22861850)
chr5 (359-411)||(29334415-29334467)
chr5 (302-409)||(10634211-10634317)
chr5 (317-412)||(24323767-24323862)
chr5 (317-412)||(24360391-24360486)
chr5 (298-408)||(31299591-31299700)
chr5 (323-408)||(1850624-1850708)
chr5 (335-412)||(34074624-34074701)
chr5 (293-331)||(19438703-19438741)
chr5 (357-412)||(12575723-12575779)
chr5 (302-365)||(39079875-39079937)
chr5 (292-331)||(41956885-41956924)
chr5 (330-412)||(22907927-22908008)
chr5 (363-412)||(7097822-7097870)
[»] chr2 (56 HSPs)
chr2 (293-412)||(8455378-8455497)
chr2 (292-414)||(14530271-14530393)
chr2 (293-412)||(12023981-12024099)
chr2 (294-412)||(10543653-10543771)
chr2 (295-412)||(11514392-11514509)
chr2 (294-412)||(24200687-24200805)
chr2 (292-410)||(25079781-25079900)
chr2 (310-412)||(17667973-17668075)
chr2 (310-412)||(17623535-17623637)
chr2 (293-411)||(17705449-17705567)
chr2 (291-412)||(21779323-21779442)
chr2 (292-412)||(22371010-22371127)
chr2 (293-414)||(5840982-5841103)
chr2 (293-412)||(9671134-9671252)
chr2 (292-412)||(23397719-23397837)
chr2 (293-409)||(7214488-7214604)
chr2 (296-412)||(25249800-25249915)
chr2 (314-413)||(40416932-40417031)
chr2 (295-412)||(17896215-17896333)
chr2 (305-410)||(39914369-39914475)
chr2 (295-412)||(19977776-19977893)
chr2 (299-412)||(27573581-27573693)
chr2 (317-412)||(5450263-5450359)
chr2 (294-412)||(32781350-32781467)
chr2 (315-404)||(33795261-33795350)
chr2 (311-393)||(44604826-44604907)
chr2 (294-406)||(14544018-14544131)
chr2 (303-412)||(24860050-24860157)
chr2 (315-412)||(29419947-29420048)
chr2 (302-412)||(99327-99434)
chr2 (302-413)||(4516412-4516522)
chr2 (330-412)||(10546153-10546236)
chr2 (330-412)||(14444720-14444801)
chr2 (328-414)||(19614981-19615067)
chr2 (302-412)||(44521435-44521544)
chr2 (315-412)||(21377135-21377232)
chr2 (293-406)||(26684688-26684803)
chr2 (335-413)||(23145759-23145837)
chr2 (335-413)||(23557549-23557627)
chr2 (302-405)||(44643486-44643589)
chr2 (335-408)||(2003602-2003676)
chr2 (302-412)||(17380299-17380407)
chr2 (328-412)||(44449446-44449529)
chr2 (349-412)||(15296469-15296532)
chr2 (317-412)||(31158503-31158598)
chr2 (292-338)||(39189557-39189603)
chr2 (355-412)||(36871509-36871565)
chr2 (359-412)||(40762296-40762349)
chr2 (328-412)||(25641491-25641574)
chr2 (333-420)||(17471542-17471630)
chr2 (377-412)||(25632547-25632582)
chr2 (316-375)||(34752761-34752820)
chr2 (298-333)||(39499355-39499390)
chr2 (354-412)||(30826052-30826109)
chr2 (293-338)||(27466266-27466311)
chr2 (340-412)||(12315714-12315785)
[»] chr1 (76 HSPs)
chr1 (293-410)||(46991781-46991898)
chr1 (293-412)||(18944620-18944739)
chr1 (293-414)||(20004152-20004273)
chr1 (299-414)||(30395788-30395903)
chr1 (293-412)||(32632619-32632737)
chr1 (292-409)||(34725163-34725278)
chr1 (296-412)||(23768382-23768498)
chr1 (292-412)||(41319868-41319988)
chr1 (293-412)||(46248015-46248134)
chr1 (292-412)||(14617014-14617134)
chr1 (293-414)||(10668197-10668323)
chr1 (303-412)||(18724607-18724715)
chr1 (291-412)||(27201622-27201743)
chr1 (293-412)||(38478344-38478461)
chr1 (292-412)||(19932817-19932934)
chr1 (293-412)||(47214488-47214605)
chr1 (312-410)||(6925096-6925194)
chr1 (291-412)||(8197018-8197139)
chr1 (293-412)||(45812599-45812716)
chr1 (293-412)||(4430088-4430207)
chr1 (293-412)||(22930131-22930248)
chr1 (290-409)||(27474255-27474373)
chr1 (299-412)||(12126899-12127010)
chr1 (302-412)||(22327086-22327195)
chr1 (316-412)||(25468325-25468421)
chr1 (302-412)||(2435849-2435958)
chr1 (299-412)||(9939443-9939557)
chr1 (302-412)||(17470408-17470517)
chr1 (294-412)||(24564322-24564440)
chr1 (315-412)||(35117830-35117927)
chr1 (292-412)||(44485171-44485290)
chr1 (296-395)||(25290143-25290244)
chr1 (298-412)||(45402077-45402192)
chr1 (303-412)||(11596501-11596608)
chr1 (303-412)||(33222971-33223079)
chr1 (298-412)||(18742021-18742137)
chr1 (297-412)||(19414420-19414533)
chr1 (302-412)||(6983873-6983980)
chr1 (292-367)||(34714599-34714674)
chr1 (302-413)||(50760287-50760397)
chr1 (303-412)||(20036208-20036317)
chr1 (302-412)||(27136714-27136823)
chr1 (335-412)||(35005142-35005219)
chr1 (302-413)||(35019217-35019327)
chr1 (302-412)||(50811926-50812036)
chr1 (302-412)||(15511211-15511322)
chr1 (295-360)||(40424721-40424786)
chr1 (335-403)||(31272446-31272513)
chr1 (350-406)||(39215027-39215083)
chr1 (340-412)||(45264462-45264534)
chr1 (330-412)||(35253249-35253329)
chr1 (302-384)||(2435983-2436064)
chr1 (302-410)||(52910204-52910312)
chr1 (294-406)||(18335914-18336026)
chr1 (304-408)||(34679285-34679388)
chr1 (297-408)||(18335354-18335465)
chr1 (349-412)||(22324926-22324988)
chr1 (302-412)||(19701557-19701666)
chr1 (294-380)||(21723642-21723727)
chr1 (377-412)||(4349699-4349734)
chr1 (309-404)||(14987989-14988084)
chr1 (357-412)||(31382276-31382330)
chr1 (302-412)||(23371111-23371219)
chr1 (349-401)||(4251455-4251507)
chr1 (344-412)||(43207523-43207591)
chr1 (381-412)||(10378797-10378828)
chr1 (358-412)||(23796507-23796561)
chr1 (302-375)||(25554821-25554893)
chr1 (379-412)||(31442452-31442485)
chr1 (379-412)||(46859129-46859162)
chr1 (292-320)||(4349675-4349703)
chr1 (293-333)||(10163736-10163776)
chr1 (289-365)||(10378834-10378909)
chr1 (360-412)||(19656168-19656220)
chr1 (335-419)||(19974130-19974213)
chr1 (372-412)||(20999912-20999952)
[»] chr4 (74 HSPs)
chr4 (289-412)||(5648209-5648331)
chr4 (300-414)||(16408663-16408777)
chr4 (293-414)||(21646918-21647039)
chr4 (292-412)||(20224937-20225055)
chr4 (292-412)||(48598887-48599005)
chr4 (292-412)||(6430688-6430807)
chr4 (292-412)||(30639333-30639452)
chr4 (293-412)||(47528592-47528709)
chr4 (296-414)||(16911519-16911637)
chr4 (293-414)||(10660358-10660479)
chr4 (293-414)||(10874503-10874624)
chr4 (292-412)||(5306726-5306845)
chr4 (293-414)||(13256461-13256578)
chr4 (293-412)||(37494805-37494924)
chr4 (293-414)||(23501747-23501862)
chr4 (293-412)||(11054210-11054327)
chr4 (314-413)||(19027823-19027922)
chr4 (292-408)||(14590790-14590907)
chr4 (340-412)||(47443958-47444030)
chr4 (319-412)||(17043456-17043549)
chr4 (312-412)||(40915802-40915901)
chr4 (302-409)||(487200-487306)
chr4 (296-398)||(17315375-17315476)
chr4 (294-412)||(54966977-54967093)
chr4 (303-412)||(25343152-25343260)
chr4 (315-412)||(35567146-35567243)
chr4 (296-409)||(14983791-14983904)
chr4 (328-412)||(25463111-25463195)
chr4 (312-404)||(44363202-44363294)
chr4 (304-399)||(42164224-42164317)
chr4 (296-414)||(54730206-54730325)
chr4 (304-412)||(8473684-8473790)
chr4 (293-409)||(55766531-55766647)
chr4 (293-414)||(20405047-20405162)
chr4 (356-412)||(20639721-20639777)
chr4 (304-412)||(47441592-47441699)
chr4 (315-398)||(43035224-43035307)
chr4 (335-412)||(9832375-9832450)
chr4 (298-384)||(30352681-30352767)
chr4 (315-409)||(39029126-39029220)
chr4 (322-412)||(41018856-41018945)
chr4 (302-411)||(51420537-51420646)
chr4 (319-412)||(54175043-54175136)
chr4 (351-412)||(9987896-9987957)
chr4 (351-412)||(21489099-21489160)
chr4 (320-412)||(39077858-39077948)
chr4 (293-409)||(55830786-55830902)
chr4 (302-412)||(30581528-30581638)
chr4 (322-412)||(7385538-7385628)
chr4 (335-412)||(29207960-29208035)
chr4 (303-412)||(30496384-30496491)
chr4 (328-412)||(7038042-7038125)
chr4 (317-397)||(32478863-32478942)
chr4 (296-367)||(5313101-5313172)
chr4 (317-412)||(23580270-23580365)
chr4 (305-383)||(49938681-49938759)
chr4 (317-413)||(30690237-30690340)
chr4 (363-412)||(51865100-51865149)
chr4 (349-407)||(17079718-17079776)
chr4 (314-412)||(44357195-44357293)
chr4 (296-333)||(18969698-18969735)
chr4 (359-412)||(25629069-25629122)
chr4 (292-349)||(29879622-29879679)
chr4 (293-412)||(20908699-20908818)
chr4 (302-412)||(32629332-32629436)
chr4 (349-397)||(36589753-36589801)
chr4 (370-414)||(48327825-48327869)
chr4 (357-412)||(7909343-7909397)
chr4 (302-405)||(49938508-49938610)
chr4 (316-412)||(3580902-3580994)
chr4 (343-412)||(10277819-10277886)
chr4 (384-414)||(20225119-20225149)
chr4 (294-367)||(20373901-20373974)
chr4 (359-412)||(49796818-49796870)
[»] scaffold0168 (1 HSPs)
scaffold0168 (293-412)||(30533-30650)
[»] chr6 (39 HSPs)
chr6 (293-412)||(1354819-1354936)
chr6 (303-414)||(12221977-12222088)
chr6 (293-412)||(1346918-1347035)
chr6 (292-407)||(8409196-8409311)
chr6 (292-414)||(29355917-29356040)
chr6 (293-410)||(1941809-1941926)
chr6 (292-414)||(9161076-9161197)
chr6 (298-414)||(2166472-2166587)
chr6 (298-414)||(2178105-2178220)
chr6 (294-412)||(13905041-13905158)
chr6 (295-412)||(3815139-3815256)
chr6 (293-414)||(6024187-6024308)
chr6 (297-409)||(20400625-20400737)
chr6 (292-386)||(14975168-14975262)
chr6 (302-412)||(7947434-7947543)
chr6 (293-401)||(15866110-15866218)
chr6 (304-412)||(14553477-14553584)
chr6 (296-412)||(32728218-32728334)
chr6 (344-412)||(33138838-33138906)
chr6 (297-384)||(24734591-24734678)
chr6 (293-379)||(33922923-33923009)
chr6 (296-384)||(12063424-12063512)
chr6 (302-410)||(12889390-12889497)
chr6 (292-404)||(22967124-22967235)
chr6 (292-404)||(23821158-23821269)
chr6 (335-394)||(17432336-17432395)
chr6 (303-404)||(24097545-24097646)
chr6 (340-412)||(28007629-28007699)
chr6 (340-404)||(17448325-17448389)
chr6 (357-412)||(25557743-25557796)
chr6 (357-412)||(26097178-26097231)
chr6 (335-413)||(23240885-23240961)
chr6 (315-412)||(2755486-2755583)
chr6 (378-410)||(14341134-14341166)
chr6 (349-412)||(11849063-11849126)
chr6 (343-401)||(4136590-4136648)
chr6 (340-401)||(15865928-15865990)
chr6 (354-419)||(19340843-19340907)
chr6 (317-412)||(32068074-32068166)
[»] scaffold0258 (1 HSPs)
scaffold0258 (295-410)||(13088-13202)
[»] scaffold0057 (3 HSPs)
scaffold0057 (302-412)||(46794-46904)
scaffold0057 (292-412)||(24834-24949)
scaffold0057 (352-412)||(43672-43730)
[»] scaffold0311 (1 HSPs)
scaffold0311 (302-412)||(10773-10883)
[»] scaffold0049 (1 HSPs)
scaffold0049 (298-412)||(58936-59050)
[»] scaffold0187 (4 HSPs)
scaffold0187 (296-412)||(10112-10226)
scaffold0187 (296-412)||(20440-20554)
scaffold0187 (292-358)||(8898-8964)
scaffold0187 (292-358)||(19226-19292)
[»] scaffold0254 (1 HSPs)
scaffold0254 (298-414)||(4117-4232)
[»] scaffold0005 (1 HSPs)
scaffold0005 (292-408)||(226471-226588)
[»] scaffold0223 (1 HSPs)
scaffold0223 (300-412)||(11093-11202)
[»] scaffold1176 (1 HSPs)
scaffold1176 (301-412)||(1649-1758)
[»] scaffold0024 (1 HSPs)
scaffold0024 (292-368)||(83828-83904)
[»] scaffold0036 (1 HSPs)
scaffold0036 (293-412)||(35079-35200)
[»] scaffold0116 (1 HSPs)
scaffold0116 (293-383)||(8848-8935)
[»] scaffold0167 (1 HSPs)
scaffold0167 (302-405)||(23567-23665)
[»] scaffold0018 (1 HSPs)
scaffold0018 (301-412)||(72929-73034)
[»] scaffold0194 (1 HSPs)
scaffold0194 (294-367)||(24619-24692)
[»] scaffold0015 (1 HSPs)
scaffold0015 (349-412)||(48696-48757)
[»] scaffold0031 (1 HSPs)
scaffold0031 (297-383)||(43085-43173)
[»] scaffold0028 (1 HSPs)
scaffold0028 (340-412)||(32931-33003)


Alignment Details
Target: chr3 (Bit Score: 321; Significance: 0; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 414
Target Start/End: Original strand, 9606883 - 9607300
Alignment:
Q  1 acaccagaagaactattactaagatgccaacagaaaaaacagaaactaaactcttagataaacgtgttgatggagcaaaatgtagcagcgggcatgacta 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| ||    
T  9606883 acaccagaagaactattactaagatgccaatagaaaaaacagaaacaaaactcttagataaacgtgttgatggagcaaaatgcagcagcgagcatgaata 9606982  T
Q  101 caacatattcttctcaaaacagtcccactacctacagatagcaatccgaccgctaccgcgtcaatctaaaatcccagggccgaaacaaaccagagggttc 200  Q
    ||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9606983 caacatattctgctcaaaacagtcccagtgcctaccgatagcaatccgaccgctacctcgtcaatctaaaatcccagggccgaaacaaaccagagggttc 9607082  T
Q  201 aacagccactat----ctaaaagaataattgaactcttttaccttatccttaacaattctctaggacaatataaatttgatcaagagtcatcatgtgagg 296  Q
    |||| |||||||    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  9607083 aacaaccactatatatctaaaagaataattgaactcttttaccttatccttaacaattcttcaggacaatataaatttgatcaagagtcatcatgtgagg 9607182  T
Q  297 ggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggct 396  Q
    |||||||||||||||||| ||||||||||| |||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9607183 ggtaaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggct 9607282  T
Q  397 gcgtacaatacaccaata 414  Q
    ||||| ||||||||||||    
T  9607283 gcgtagaatacaccaata 9607300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 40272994 - 40272874
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||    
T  40272994 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta 40272895  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  40272894 aggctgcgtacaatacaccaa 40272874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 293 - 414
Target Start/End: Complemental strand, 13730785 - 13730664
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  13730785 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 13730686  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    ||||| ||||||||||||||||    
T  13730685 ggctgtgtacaatacaccaata 13730664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 292 - 414
Target Start/End: Complemental strand, 8247871 - 8247749
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  8247871 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 8247772  T
Q  392 aggctgcgtacaatacaccaata 414  Q
    ||| |||||||||||||||||||    
T  8247771 aggttgcgtacaatacaccaata 8247749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 293 - 414
Target Start/End: Complemental strand, 46421218 - 46421097
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||  |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  46421218 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 46421119  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||||    
T  46421118 ggctgcgtacaatacaccaata 46421097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 294 - 414
Target Start/End: Complemental strand, 29366902 - 29366782
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    |||||||||||||||| |||||||||||||||| |||||| |||  |||||||| ||||||||||||||||||| |||||||  ||||||||||||||||    
T  29366902 aggggtaaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaag 29366803  T
Q  394 gctgcgtacaatacaccaata 414  Q
    |||||||||||||||||||||    
T  29366802 gctgcgtacaatacaccaata 29366782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 4495845 - 4495726
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||| | ||| ||| ||||||||||||||||    
T  4495845 gaggggtaaccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaa 4495746  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  4495745 ggctgcgtacaatacaccaa 4495726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 292 - 414
Target Start/End: Complemental strand, 13628975 - 13628852
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaa-gttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt 390  Q
    ||||||||||||||||| ||||||||||| |||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| |||| |||||||||    
T  13628975 tgaggggtaaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggt 13628876  T
Q  391 aaggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||||||    
T  13628875 aaggctgcgtacaatacaccaata 13628852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 1217065 - 1217183
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  |||||||||||    
T  1217065 tgaggggtaaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggta 1217162  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  1217163 aggctgcgtacaatacaccaa 1217183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 12914216 - 12914097
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| | |||| || | ||||||||  |||||||||||||||||| ||||||| ||||||||||||||||    
T  12914216 gaggggtaaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 12914117  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||| ||||||||||||||||    
T  12914116 ggcggcgtacaatacaccaa 12914097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 7697067 - 7696949
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||  |||||||| |||||||||||||||||||  |||||| ||  |||||||||||    
T  7697067 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgt--aaaacagggta 7696970  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  7696969 aggctgcgtacaatacaccaa 7696949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 293 - 401
Target Start/End: Complemental strand, 10870132 - 10870025
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| || |||||||||||||    
T  10870132 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaa 10870034  T
Q  393 ggctgcgta 401  Q
    |||||||||    
T  10870033 ggctgcgta 10870025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 16735416 - 16735535
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgta-aaaaacagggt 390  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| || ||||| |||||||||||| |||||| ||||||  ||| |||||||||||    
T  16735416 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctctt--gtagaaaaacagggt 16735513  T
Q  391 aaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||    
T  16735514 aaggctgcgtacaatacaccaa 16735535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 292 - 413
Target Start/End: Original strand, 26573103 - 26573223
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||| | |||||||||||| |||||||||||| ||| || |||| |||||||| ||||||||||||||||||| |||| || |||||||||||||||    
T  26573103 tgagggggacccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggta 26573201  T
Q  392 aggctgcgtacaatacaccaat 413  Q
    ||||||||||||||||||||||    
T  26573202 aggctgcgtacaatacaccaat 26573223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 22609742 - 22609860
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||| ||||| || |||||||||| |||||||| ||||||| || ||||||||||||    
T  22609742 tgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgt-aaaaacagggta 22609839  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  22609840 aggctgcgtacaatacaccaa 22609860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 6412002 - 6411884
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||  ||||||  |||||||||| || ||||| ||||||| || |||||||||||||    
T  6412002 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgt-aaaaacagggtaa 6411904  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  6411903 ggctgcgtacaatacaccaa 6411884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 306 - 412
Target Start/End: Original strand, 26869696 - 26869801
Alignment:
Q  306 ggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaat 405  Q
    ||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||| | || ||||||||||||||||||||||||||    
T  26869696 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgt-aaaaacagggtaaggctgcgtacaat 26869794  T
Q  406 acaccaa 412  Q
    |||||||    
T  26869795 acaccaa 26869801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 39203491 - 39203609
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||| ||||| ||||||||||| |||||| |||| |||||||| |||||||||||| |||||| ||||||| ||  |||||||||||    
T  39203491 tgaggggtaaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgt--aaaacagggta 39203588  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    ||| |||||||||||||||||    
T  39203589 aggttgcgtacaatacaccaa 39203609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 52926391 - 52926281
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| |||         ||||    
T  52926391 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta---------gtaa 52926301  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  52926300 ggctgcgtacaatacaccaa 52926281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 34420815 - 34420706
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| | |||||||||| ||| || |||| |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  34420815 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 34420717  T
Q  402 caatacaccaa 412  Q
    | |||||||||    
T  34420716 ccatacaccaa 34420706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 292 - 413
Target Start/End: Complemental strand, 45621010 - 45620889
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggt 390  Q
    ||||||| | |||||||||||| |||||||||||| ||| || |||| |||||||| ||||||||| ||||||||| ||||||| || ||||||||||||    
T  45621010 tgagggggagccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggt 45620912  T
Q  391 aaggctgcgtacaatacaccaat 413  Q
    |||||||||||||||||||||||    
T  45620911 aaggctgcgtacaatacaccaat 45620889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 54032705 - 54032623
Alignment:
Q  328 tcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacacc 410  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacacc 54032623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 297 - 412
Target Start/End: Complemental strand, 22123092 - 22122979
Alignment:
Q  297 ggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggct 396  Q
    |||||||||||||| ||||||||| ||||| |||||| |||| |||||| | |||||||||||||||||||  |||||| ||  ||||||||||||||||    
T  22123092 ggtaaccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgt--aaaacagggtaaggct 22122995  T
Q  397 gcgtacaatacaccaa 412  Q
    ||||||||||||||||    
T  22122994 gcgtacaatacaccaa 22122979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 12525384 - 12525489
Alignment:
Q  291 gtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt 390  Q
    |||||||||||||||||||||||||||||||||||   ||| | |||| |||||||| ||||| ||||||||||||| ||||||| ||||||| ||||||    
T  12525384 gtgaggggtaaccttggcgcaactggtaaagttgt---catatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggt 12525480  T
Q  391 aaggctgcg 399  Q
    |||||||||    
T  12525481 aaggctgcg 12525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 5173903 - 5173783
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaa-gttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt 390  Q
    ||||||||||||||||||||||| ||||| |||||| |||||| |||| |||||||| ||||||||||||||||||||||||||| || |||||||  ||    
T  5173903 tgaggggtaaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgt-aaaaacaaagt 5173805  T
Q  391 aaggctgcgtacaatacaccaa 412  Q
    |||| ||| | |||||||||||    
T  5173804 aaggttgcatgcaatacaccaa 5173783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 302 - 413
Target Start/End: Complemental strand, 45949012 - 45948899
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactg---gaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgc 398  Q
    |||||||||||| ||| |||||||| |||||| ||||   ||||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||    
T  45949012 ccttggcgcaac-ggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaaggctgc 45948914  T
Q  399 gtacaatacaccaat 413  Q
     ||||||||||||||    
T  45948913 atacaatacaccaat 45948899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 53996737 - 53996628
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    ||||||||| || |||||| ||||| |||| | |||| ||||||||  ||||||||| |||||||||||||||| |||||||||||||||||||||| ||    
T  53996737 ccttggcgctac-ggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgctta 53996639  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  53996638 caatacaccaa 53996628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9601463 - 9601539
Alignment:
Q  1 acaccagaagaactattactaagatgccaacagaaaaaacagaaactaaactcttagataaacgtgttgatggagcaa 78  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  9601463 acaccagaacaactattactaagatgccaacagaataaacagaaac-aaactcttagataaacgtgttgacggagcaa 9601539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 349 - 414
Target Start/End: Original strand, 14986989 - 14987054
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  14986989 ggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaata 14987054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 516420 - 516504
Alignment:
Q  328 tcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| |||||    
T  516420 tcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgcacaataaaccaa 516504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 412
Target Start/End: Complemental strand, 54374498 - 54374408
Alignment:
Q  322 ttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||| | || |||| |||||||| |||||||||| |||||||||||||||| |||||||| |||||||||||||||||||| ||||||    
T  54374498 ttgttattacgtgactgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaatccaccaa 54374408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 320 - 408
Target Start/End: Original strand, 7942993 - 7943081
Alignment:
Q  320 agttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaataca 408  Q
    ||||||| |||||| ||||||||||||| | ||||||||||||||||| | |||||  |||||||||||||||| ||||||||||||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgtacaataca 7943081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 45139624 - 45139540
Alignment:
Q  328 tcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||| |||| |||||||| |||||||||  |||||||||||||||| |||||| ||||||||||||||| |||||||||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaa 45139540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 10795550 - 10795487
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  10795550 ggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaa 10795487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 319 - 413
Target Start/End: Complemental strand, 30928302 - 30928208
Alignment:
Q  319 aagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaat 413  Q
    ||||| || |||||| |||| |||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||| || ||| |||||||||||    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgtgtaaaatacaccaat 30928208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 296 - 409
Target Start/End: Original strand, 21874999 - 21875106
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaagg 394  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||       || ||||||| | ||||||||||||||||| || |||||| |||||||||    
T  21874999 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactg-------acgggttcaaattctggaaacaacctcttgtgttaaaaaagagggtaagg 21875091  T
Q  395 ctgcgtacaatacac 409  Q
    |||||||||||||||    
T  21875092 ctgcgtacaatacac 21875106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 409
Target Start/End: Complemental strand, 25517353 - 25517235
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttca--agtcctggaaacaacctcttgcgt-aaaaaacagggt 390  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||||||||| || | |   | |||||||||| ||||||| || |||||||| | |    
T  25517353 agggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggatgatgggacctggaaacatcctcttgtgtaaaaaaacaagat 25517254  T
Q  391 aaggctgcgtacaatacac 409  Q
    | |||||||||||||||||    
T  25517253 atggctgcgtacaatacac 25517235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 389
Target Start/End: Original strand, 35417902 - 35417988
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacaggg 389  Q
    |||||||||||| ||||||||||||||||||| ||||  |||||||  |||||| ||||||||||| ||||||| |||||||||||||    
T  35417902 ccttggcgcaac-ggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaaaaaacaggg 35417988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 412
Target Start/End: Original strand, 25944455 - 25944564
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| | |||||||||| ||| || |||| |||||||  ||||||||||||||||||  ||||| | ||||||||| ||| ||||||| |||    
T  25944455 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggctgagta 25944553  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  25944554 caatacaccaa 25944564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 414
Target Start/End: Complemental strand, 49013589 - 49013535
Alignment:
Q  360 tggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaata 414  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  49013589 tggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaata 49013535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 412
Target Start/End: Original strand, 26782345 - 26782461
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    ||||||||||| ||||| |||||||||| || |||||  | || |||||||| | |||||||||| ||||||| |||||| |||||||| ||||||| ||    
T  26782345 gggtaaccttgacgcaattggtaaagttattgtcatgcgattgaaaggtcacggattcaagtccttgaaacaatctcttgtgtaaaaaatagggtaatgc 26782444  T
Q  396 tgcgtacaatacaccaa 412  Q
    ||  || ||||||||||    
T  26782445 tgtataaaatacaccaa 26782461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 31592881 - 31592942
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||||||    
T  31592881 ggttcaagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 31592942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 33926094 - 33926176
Alignment:
Q  328 tcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacacca 411  Q
    |||||| |||| |||||||  ||||||||||||||||| | ||||||| || |||||||||||||||||| |||||||||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgt-aaaaacagggtaaggctgtgtacaatacacca 33926176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 9276290 - 9276359
Alignment:
Q  349 ggttcaagtcctggaaacaacctc------ttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||||      ||| ||||||||||||||||||||||||||||||||||||    
T  9276290 ggttcaagtcctggaaacaacctcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 9276359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 408
Target Start/End: Original strand, 39212003 - 39212081
Alignment:
Q  330 atgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaataca 408  Q
    |||| |||| || ||||| ||||||||||||||||| ||||||||| ||||| |||| |||||| ||||||||||||||    
T  39212003 atgtgactgaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgtacaataca 39212081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 412
Target Start/End: Complemental strand, 45786327 - 45786278
Alignment:
Q  363 aaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  45786327 aaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 45786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 52428612 - 52428539
Alignment:
Q  340 aaggtcaccggttcaagtc-ctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||| |||| ||||| |||||| || ||||||| |||||| |||||||||||||||||||||||||||||    
T  52428612 aaggtcacgggtttaagtctctggaagcagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaa 52428539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 391
Target Start/End: Original strand, 53062036 - 53062112
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||| |||||| |||| ||||||||  |||||||||||||||||| |||| || || ||||||||||||    
T  53062036 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggta 53062112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 412
Target Start/End: Original strand, 55401207 - 55401271
Alignment:
Q  348 cggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||||| ||||| ||||||| |||||||||||| |||| ||||||| ||||||||||    
T  55401207 cggttcaagtcctgtaaacagcctcttgtgtaaaaaacaggttaagactgcgtataatacaccaa 55401271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 410
Target Start/End: Original strand, 19731000 - 19731095
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacacc 410  Q
    |||||| ||||| ||| || | || |||||||| | | ||||||||||||| | ||||||| |||||||||| ||||||| |||||||||||||||    
T  19731000 ggtaaatttgttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggttgcgtacaatacacc 19731095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 8411004 - 8410929
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| ||||||||||||||| |||||||||||  |||| ||  |||||||||||||||||||||  ||||||||||||    
T  8411004 actgaaaggtcaccggttcaggtcctggaaactgcctcgtg--taaaaaacagggtaaggctgctcacaatacaccaa 8410929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 353448 - 353411
Alignment:
Q  377 gtaaaaaacagggtaaggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||||||||||||||||||||    
T  353448 gtaaaaaacagggtaaggctgcgtacaatacaccaata 353411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 412
Target Start/End: Original strand, 54484730 - 54484786
Alignment:
Q  357 tcctggaaacaacctcttgcgtaaaaaa-cagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| ||||||| |||||||| || |||||||||||||||||||||||||    
T  54484730 tcctggaaacagcctcttgtgtaaaaaaacaaggtaaggctgcgtacaatacaccaa 54484786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 19751601 - 19751671
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacacc 410  Q
    |||||||| | | ||||||||||||| | ||||||| ||||||| || ||||||| |||||||||||||||    
T  19751601 aaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaatcaaggtaaggttgcgtacaatacacc 19751671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 412
Target Start/End: Original strand, 47624088 - 47624136
Alignment:
Q  363 aaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  47624088 aaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaa 47624136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 1121359 - 1121287
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||  ||| |||||||||||||||| ||||| |||| ||| | ||| || ||||||||||||||||||    
T  1121359 aaggtcacgtgtttaagtcctggaaacaacttcttgtgtaagaaataaggtgagactgcgtacaatacaccaa 1121287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 9276249 - 9276289
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatg 332  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  9276249 tgaggggtaaccttggcgcaactagtaaagttgttgtcatg 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 29106576 - 29106644
Alignment:
Q  344 tcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| ||| |||||| || ||||||||||||| |||||||| ||| ||||| | |||||||||||||||    
T  29106576 tcacgggtacaagtcttgaaaacaacctcttgtgtaaaaaataggataaggttacgtacaatacaccaa 29106644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 31904975 - 31904919
Alignment:
Q  356 gtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||| ||| ||  ||||||||||||||| | ||||||||||||||||||    
T  31904975 gtcctggaaacagcctattatgtaaaaaacagggtatgactgcgtacaatacaccaa 31904919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 43114994 - 43114930
Alignment:
Q  350 gttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaa-ggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||| ||||||| || |||||||||||||| |||| | |||||||||||||    
T  43114994 gttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaagggctacctacaatacaccaa 43114930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 412
Target Start/End: Original strand, 15797284 - 15797315
Alignment:
Q  381 aaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||||||||||||    
T  15797284 aaaacagggtaaggctgcgtacaatacaccaa 15797315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 23871418 - 23871457
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaa 335  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  23871418 gggtaaccttggcgcaactagtaaagttgttgtcatgtaa 23871457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 409
Target Start/End: Original strand, 33235513 - 33235624
Alignment:
Q  300 aaccttggcgcaactggtaaagttgttatcatgtaac-tggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaa-aacagggtaaggctg 397  Q
    |||||||  ||| |||||||||||||| |||||| || || ||||||||  |||||| || || ||| | ||||||| |||||| ||||||||||| |||    
T  33235513 aaccttgatgcagctggtaaagttgttgtcatgtgacatgaaaggtcacaagttcaaatcgtgtaaagagcctcttgtgtaaaaaaacagggtaagactg 33235612  T
Q  398 cgtacaatacac 409  Q
     |||||||||||    
T  33235613 tgtacaatacac 33235624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 412
Target Start/End: Complemental strand, 34771457 - 34771426
Alignment:
Q  381 aaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||||||||||||    
T  34771457 aaaacagggtaaggctgcgtacaatacaccaa 34771426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 21330418 - 21330308
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaaca--gggtaaggctgcg 399  Q
    ||||||||||| ||||||||| ||| |||||| |||  ||| |||| | |||||  ||| ||||||||| ||||||||||||| |  ||||||||| ||     
T  21330418 ccttggcgcaa-tggtaaagtggttgtcatgtgacttaaag-tcacagtttcaatccctagaaacaaccacttgcgtaaaaaaaatagggtaaggccgca 21330321  T
Q  400 tacaatacaccaa 412  Q
    |||||||||||||    
T  21330320 tacaatacaccaa 21330308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 50625072 - 50625016
Alignment:
Q  355 agtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacacca 411  Q
    |||||| |||||| ||||||| ||| |||| |||||||||  |||||||||||||||    
T  50625072 agtcctagaaacagcctcttgtgtataaaaaagggtaaggtagcgtacaatacacca 50625016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 46354148 - 46354269
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  46354148 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaa 46354247  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||||    
T  46354248 ggctgcgtacaatacaccaata 46354269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 292 - 414
Target Start/End: Original strand, 42805477 - 42805599
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  42805477 tgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 42805576  T
Q  392 aggctgcgtacaatacaccaata 414  Q
    |||||| ||||||||||||||||    
T  42805577 aggctgtgtacaatacaccaata 42805599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 2541202 - 2541081
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaa-ggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt 390  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  2541202 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt 2541103  T
Q  391 aaggctgcgtacaatacaccaa 412  Q
    |||||||||||| |||||||||    
T  2541102 aaggctgcgtactatacaccaa 2541081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 47716413 - 47716534
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||| ||||||| |||||||||  ||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  47716413 gaggggtaaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 47716512  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||||    
T  47716513 ggctgcgtacaatacaccaata 47716534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 21172188 - 21172071
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||||| ||  ||||||||||||    
T  21172188 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaa 21172091  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  21172090 ggctgcgtacaatacaccaa 21172071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 42798623 - 42798742
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||  |||||| |||||||||| |||||    
T  42798623 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaa 42798722  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  42798723 ggctgcgtacaatacaccaa 42798742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 43557426 - 43557547
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||| |||||||  ||||||||||||||||||| ||||||| ||||||||||| ||||    
T  43557426 gaggggtaaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaa 43557525  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||||    
T  43557526 ggctgcgtacaatacaccaata 43557547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 300 - 412
Target Start/End: Complemental strand, 11617762 - 11617650
Alignment:
Q  300 aaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcg 399  Q
    ||||| ||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  11617762 aacctcggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcg 11617663  T
Q  400 tacaatacaccaa 412  Q
    |||||||||||||    
T  11617662 tacaatacaccaa 11617650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 32758214 - 32758332
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  |||||||||||    
T  32758214 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt--aaaacagggta 32758311  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||| ||||||||||||||    
T  32758312 aggctgtgtacaatacaccaa 32758332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 48735303 - 48735184
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcc-tggaaacaacctcttgcgtaaaaaacagggt 390  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||| |||||||||||||||| ||  |||||| |||    
T  48735303 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgt--aaaacacggt 48735206  T
Q  391 aaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||    
T  48735205 aaggctgcgtacaatacaccaa 48735184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 12473257 - 12473377
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||| |||||||||||| |||||||||||| ||||||| ||| |||||||  ||||||||||||| ||||||||||||| || ||||||||||||    
T  12473257 tgaggggtagccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggta 12473356  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    ||| |||||||||||||||||    
T  12473357 aggatgcgtacaatacaccaa 12473377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 304 - 412
Target Start/End: Complemental strand, 19427059 - 19426951
Alignment:
Q  304 ttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtaca 403  Q
    ||||||||||||||||||||||| |||||| || | |||||||| ||||||||||||||||||| ||||||| |||||||| |||||||| |||||||||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtaca 19426960  T
Q  404 atacaccaa 412  Q
    |||||||||    
T  19426959 atacaccaa 19426951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 22699151 - 22699032
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||| ||||| |  ||||||||||||||||| |  |||||| ||||||||||||||||    
T  22699151 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaa 22699052  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    | ||||||||||||||||||    
T  22699051 gactgcgtacaatacaccaa 22699032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 301 - 412
Target Start/End: Original strand, 27629596 - 27629707
Alignment:
Q  301 accttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgt 400  Q
    |||||||||||||||||||||||||| |||| | || | |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||| |||||    
T  27629596 accttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgt 27629695  T
Q  401 acaatacaccaa 412  Q
    | ||||||||||    
T  27629696 aaaatacaccaa 27629707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 300 - 412
Target Start/End: Complemental strand, 10693245 - 10693135
Alignment:
Q  300 aaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcg 399  Q
    ||||||||||||||| ||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  |||| ||||||||||||||    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaagagggtaaggctgcg 10693148  T
Q  400 tacaatacaccaa 412  Q
    |||||||||||||    
T  10693147 tacaatacaccaa 10693135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 294 - 397
Target Start/End: Original strand, 18326989 - 18327091
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||||| ||||||| ||||||| || ||||||||||||||    
T  18326989 aggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgt-aaaaacagggtaag 18327087  T
Q  394 gctg 397  Q
    ||||    
T  18327088 gctg 18327091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 292 - 410
Target Start/End: Complemental strand, 35334996 - 35334880
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||||   ||| | |||||||||||||||    
T  35334996 tgagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaaca--gtctcgtgtaaaaaacagggta 35334899  T
Q  392 aggctgcgtacaatacacc 410  Q
    || ||| ||||||||||||    
T  35334898 agactgtgtacaatacacc 35334880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 34626389 - 34626270
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||| |||||||||||||||||||| |||||| | || |||| ||| | ||||||||||||||||| |||| || || ||||||||||||    
T  34626389 tgaggggtaaccttagcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgt-aaaaacagggta 34626291  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    ||||||||| |||||||||||    
T  34626290 aggctgcgttcaatacaccaa 34626270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 412
Target Start/End: Complemental strand, 14732999 - 14732885
Alignment:
Q  297 ggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggct 396  Q
    |||||||||||||||||||||||||||||| |||||| |||| || ||||  ||||||||||||||||||| ||||    ||||||||||||||||||||    
T  14732999 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggct 14732900  T
Q  397 gcgtacaatacaccaa 412  Q
    |||| |||||||||||    
T  14732899 gcgt-caatacaccaa 14732885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 33872070 - 33871972
Alignment:
Q  313 ctggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||||| |||||| |||| |||||| | ||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  33872070 ctggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgt-aaaaacaggataaggctgcgtacaatacaccaa 33871972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 294 - 412
Target Start/End: Complemental strand, 5180337 - 5180219
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||| |||||||  ||||||| | ||||||||| ||||||| || ||||||||||||||    
T  5180337 aggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaag 5180238  T
Q  394 gctgcgtacaatacaccaa 412  Q
     ||| |||||| |||||||    
T  5180237 actgtgtacaacacaccaa 5180219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 23419845 - 23419736
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||| | |||||| |||  |||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||| |||||||    
T  23419845 ccttggcgcaac-ggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgta 23419747  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  23419746 caatacaccaa 23419736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 394
Target Start/End: Complemental strand, 42496017 - 42495916
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||| | |||| |||||||| ||||||||||||||||||| |||||||  | ||||||||||||    
T  42496017 tgaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtat-aaaaacagggta 42495919  T
Q  392 agg 394  Q
    |||    
T  42495918 agg 42495916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 2663112 - 2662997
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||| ||||||||||| | |||| ||||||  ||||  ||||||||||||||||||| ||||||| ||  |||| |||||||    
T  2663112 gaggggtaaccttggcgcaactagtaaagttgttgttatgtgactgga--gtcataggttcaagtcctggaaacagcctcttgtgt--aaaatagggtaa 2663017  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  2663016 ggctgcgtacaatacaccaa 2662997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 315 - 412
Target Start/End: Original strand, 16341254 - 16341351
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||  || |||||||| ||||||||| || |||||| ||||||| |||||||||||||||||||| |||||||||||||||    
T  16341254 ggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgtacaatacaccaa 16341351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 293 - 382
Target Start/End: Complemental strand, 47078034 - 47077945
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaa 382  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||||||||||||||  |||||| ||||||    
T  47078034 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa 47077945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 293 - 397
Target Start/End: Original strand, 7193039 - 7193143
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||||||| |||| ||||||||||| |||||| |||| |||||||| |||||||||||| |||||||||||||| ||||| || | |||||    
T  7193039 gaggggtaaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaacaatatggtaa 7193138  T
Q  393 ggctg 397  Q
    |||||    
T  7193139 ggctg 7193143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 414
Target Start/End: Complemental strand, 1424085 - 1423970
Alignment:
Q  299 taaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgc 398  Q
    |||| ||||||||||||||||||||||| | |||| ||||||||||||| | ||||| |||||||||||  || ||| |||||||||||||||| |||||    
T  1424085 taactttggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaacagtctgttgtgtaaaaaacagggtaatgctgc 1423986  T
Q  399 gtacaatacaccaata 414  Q
     |||| ||||||||||    
T  1423985 atacactacaccaata 1423970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 294 - 412
Target Start/End: Complemental strand, 8149126 - 8149007
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcg-taaaaaacagggtaa 392  Q
    ||||||||||||||| |||||||||| |||||| |||||| |||| || |||||  |||||||||||| |||| |||||||| | ||||||| |||||||    
T  8149126 aggggtaaccttggcacaactggtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaa 8149027  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    || |||||||||||||||||    
T  8149026 ggttgcgtacaatacaccaa 8149007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 412
Target Start/End: Original strand, 19266414 - 19266523
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||| ||||| |||||||||||| |||||| |||| ||||||   ||||||||||||| ||| | || ||||||||||||||||||||||||||||||    
T  19266414 ccttggtgcaac-ggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaaggctgcgta 19266512  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  19266513 caatacaccaa 19266523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 28362316 - 28362207
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||||| ||||||  ||| |||||||| |||||||||||| |||||  ||||||| |||||||||  ||||||||||||||    
T  28362316 ccttggcgcaac-ggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgta 28362218  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  28362217 caatacaccaa 28362207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 48123655 - 48123546
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||||||||||||  ||| |||||||  ||||||||||||||||||| ||||||| ||||| ||||||||||  |||| ||    
T  48123655 ccttggcgcaac-ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaaaactgcata 48123557  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  48123556 caatacaccaa 48123546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 396
Target Start/End: Complemental strand, 7794682 - 7794582
Alignment:
Q  298 gtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt--aaaaaacagggtaaggc 395  Q
    |||||||| |||||||||||||||||||| | |||| ||||||||||||| ||||||||||||||||||| ||||||  ||  |||||||||||||||||    
T  7794682 gtaaccttagcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaaaaacagggtaaggc 7794583  T
Q  396 t 396  Q
    |    
T  7794582 t 7794582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 40463837 - 40463949
Alignment:
Q  299 taaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgc 398  Q
    ||||||||||||||| |||||||||||| |||||| |||| |||||||| |||||||||| | ||||||  |||||| || |||||| ||||||||||||    
T  40463837 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgt-aaaaactgggtaaggctgc 40463935  T
Q  399 gtacaatacaccaa 412  Q
    ||| ||||||||||    
T  40463936 gtataatacaccaa 40463949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 42476826 - 42476944
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||| |||||| |||||||||||||||| |||||| |||  |||||||| | ||||||| |||||||||  |||||| ||  |||||| ||||    
T  42476826 tgaggggtaacattggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgt--aaaacaaggta 42476923  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  42476924 aggctgcgtacaatacaccaa 42476944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 7879639 - 7879711
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||| |||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaa 7879711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 385
Target Start/End: Original strand, 21447544 - 21447636
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaac 385  Q
    ||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||| | |||||||| || ||||| ||||||| |||||||||    
T  21447544 gaggggtaaccttggcgcaactgataaatttgttgtcatgtaattggaaggtcacggattcaagtcttgaaaacagcctcttgtgtaaaaaac 21447636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 412
Target Start/End: Original strand, 29907393 - 29907492
Alignment:
Q  315 ggtaaagttgtt--atcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||  ||||||| |||| |||||||| |||||||||||| |||||| ||||||| |||||||| || |||||||||||| |||||||||||    
T  29907393 ggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcgttcaatacaccaa 29907492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 412
Target Start/End: Complemental strand, 42391251 - 42391162
Alignment:
Q  321 gttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||| |||||| |||| |||||||| ||||||||||||||||||| | ||||| ||  ||||||||||||||||||||||||||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgt--aaaacagggtaaggctgcgtacaatacaccaa 42391162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 314 - 412
Target Start/End: Original strand, 7644931 - 7645029
Alignment:
Q  314 tggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||| ||||| | | || |||| |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||   ||||||||||||||||    
T  7644931 tggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagatagcgtacaatacaccaa 7645029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 412
Target Start/End: Complemental strand, 14099165 - 14099068
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||| |||||| |||| |||||||  |||| |||||||||||| | ||| ||| |||||||||||| |||| ||||||||||||||||||    
T  14099165 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacaccaa 14099068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 412
Target Start/End: Complemental strand, 14409182 - 14409085
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||| |||||| |||| |||||||  |||| |||||||||||| | ||| ||| |||||||||||| |||| ||||||||||||||||||    
T  14409182 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacaccaa 14409085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 403
Target Start/End: Complemental strand, 42102056 - 42101956
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    ||||||| |||| |||||||||||| ||| || ||||||||||||   |||||||||||||||||| |||||| |||||||||||||||||  |||||||    
T  42102056 ccttggcacaac-ggtaaagttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacagcctcttccgtaaaaaacagggtaacactgcgta 42101958  T
Q  402 ca 403  Q
    ||    
T  42101957 ca 42101956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 412
Target Start/End: Original strand, 19265781 - 19265887
Alignment:
Q  304 ttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtaca 403  Q
    |||||||||| |||||||||||| ||| || |||| |||||||| |||||||||| |||| ||| || |||| || ||||| ||||||||||||||||||    
T  19265781 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgt-aaaaagagggtaaggctgcgtaca 19265878  T
Q  404 atacaccaa 412  Q
    |||||||||    
T  19265879 atacaccaa 19265887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 28078313 - 28078194
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||| |||||||||| || |||||||| |||||| |||| |||||||| |||||||||||| ||||||  ||| ||   |||||||||||||    
T  28078313 tgaggggtaaccctggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagtctcgtg-taaaaaaacagggta 28078215  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    ||| ||| | |||||||||||    
T  28078214 aggttgcatgcaatacaccaa 28078194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 13805057 - 13805174
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||| | ||||||||||| ||||||||||||| |||||| |||| ||||| || ||||||||||||||||| | ||||| | |||||| |  ||||||    
T  13805057 gagggggagccttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaaca-ggggtaa 13805154  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||| ||||||||||||||    
T  13805155 ggctgtgtacaatacaccaa 13805174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 18512586 - 18512517
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacacc 410  Q
    |||||||| ||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||||    
T  18512586 aaggtcacgggttcaagtcctggaaacaacatcttgtgt-aaaaatagggtaaggctgcgtacaatacacc 18512517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 3469350 - 3469239
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt--aaaaaacagggtaaggctgcg 399  Q
    |||||||||||| |||||||||||| |||||| |||| |||||||| |  ||||||||| ||||||  |||||| ||  ||||||||||||| || ||||    
T  3469350 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaacattctcttgtgtaaaaaaaacagggtacggttgcg 3469252  T
Q  400 tacaatacaccaa 412  Q
    |||||||||||||    
T  3469251 tacaatacaccaa 3469239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 396
Target Start/End: Complemental strand, 29140538 - 29140438
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    |||||| |||||||||||||||||||||||| ||||||||||| ||||||||   |||||||  || |||||| |||||  |||||||| | ||||||||    
T  29140538 gggtaatcttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacacattcaagttttgaaaacaatctcttaggtaaaaaataaggtaaggc 29140439  T
Q  396 t 396  Q
    |    
T  29140438 t 29140438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 35203440 - 35203512
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||| |||||||||||||||||||  |||||| |||||||||||| |||| |||||||||||| |||||    
T  35203440 aaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgtacaatataccaa 35203512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 38262340 - 38262258
Alignment:
Q  330 atgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| ||||||||||||| |||||||||||||||||||  |||||| |||||||| | ||||| | ||| |||||||||||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaatgttgcatacaatacaccaa 38262258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 408
Target Start/End: Complemental strand, 31591241 - 31591175
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaataca 408  Q
    ||||||||  |||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||    
T  31591241 aaggtcacgagttcaagtcctggaaacaacctcttgtgt--aaaacagagtaaggctgcgtacaataca 31591175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 32233273 - 32233197
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| |||||||  ||||||||||||||||||||||||||| || |||||||||||||||| ||||| | ||||||||    
T  32233273 actgaaaggtcatgggttcaagtcctggaaacaacctcttgtgt-aaaaacagggtaaggcagcgtatattacaccaa 32233197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 396
Target Start/End: Original strand, 5814424 - 5814528
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||| ||| ||||||||||||  |||||||||||| | |||| | ||||| ||||| |||||||||  |||||| ||||||||  |||||||| ||||||    
T  5814424 tgagaggttaccttggcgcaatcggtaaagttgttgttatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 5814523  T
Q  392 aggct 396  Q
    |||||    
T  5814524 aggct 5814528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 412
Target Start/End: Original strand, 6736867 - 6736962
Alignment:
Q  316 gtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| |||||  |||| |||||||| ||||||||||||  |||||||||||||  | ||||||| |||||| |||| |||||||||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtat-aaaaacaaggtaagactgcatacaatacaccaa 6736962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 412
Target Start/End: Original strand, 11741774 - 11741866
Alignment:
Q  318 aaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||| |||||| |||| |||||||  ||||||||||||| ||||| | ||| | |||||| |  ||||||||||||||||||||||||||    
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgtaaaata--gggtaaggctgcgtacaatacaccaa 11741866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 413
Target Start/End: Original strand, 18747482 - 18747561
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaa-cagggtaaggctgcgtacaatacaccaat 413  Q
    |||| |||||||| || ||||||| |||||||| ||| ||| |||||||| ||||||||||||||||| |||||||||||    
T  18747482 actgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggtaaggctgcgtataatacaccaat 18747561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 358 - 412
Target Start/End: Original strand, 38604546 - 38604599
Alignment:
Q  358 cctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  38604546 cctggaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaa 38604599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 408
Target Start/End: Original strand, 1408469 - 1408526
Alignment:
Q  351 ttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaataca 408  Q
    ||||||||||||||| | ||||||| |||||||||| |||||||||| ||||||||||    
T  1408469 ttcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggctgtgtacaataca 1408526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 412
Target Start/End: Original strand, 21566439 - 21566508
Alignment:
Q  343 gtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||| |||||||||| |||||||  ||||||| ||||||||||| | ||| ||||||||||||||||||    
T  21566439 gtcacaggttcaagtcttggaaaccgcctcttgtgtaaaaaacagaggaagactgcgtacaatacaccaa 21566508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 43852047 - 43852111
Alignment:
Q  343 gtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaataca 408  Q
    ||||| ||||||||||||| ||| ||||||||  ||||||||||||||||||||  ||||||||||    
T  43852047 gtcacgggttcaagtcctgaaaa-aacctcttctgtaaaaaacagggtaaggctatgtacaataca 43852111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 397
Target Start/End: Original strand, 27697452 - 27697495
Alignment:
Q  354 aagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctg 397  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||    
T  27697452 aagtcctggaaacaacctcttgtgtaaaaatcagggcaaggctg 27697495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 412
Target Start/End: Original strand, 39123857 - 39123966
Alignment:
Q  305 tggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt----aaggctgcgt 400  Q
    |||||||| ||||||||||||| |||||| |||| || | ||| |||||||||||| |||||   |||||| || |||||||||||    ||||||||||    
T  39123857 tggcgcaa-tggtaaagttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaacggtctcttgtgt-aaaaacagggtagggaaggctgcgt 39123954  T
Q  401 acaatacaccaa 412  Q
    | ||||||||||    
T  39123955 aaaatacaccaa 39123966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 45019056 - 45019007
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaagg 343  Q
    |||||||||||||||||||||||||||| |  | |||||| |||||||||    
T  45019056 aggggtaaccttggcgcaactggtaaaggtcctgtcatgtgactggaagg 45019007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 4e-48; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 293 - 414
Target Start/End: Complemental strand, 7136710 - 7136589
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||||    
T  7136710 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaa 7136611  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||||    
T  7136610 ggctgcgtacaatacaccaata 7136589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 36720749 - 36720869
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  36720749 tgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 36720848  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  36720849 aggctgcgtacaatacaccaa 36720869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 292 - 410
Target Start/End: Complemental strand, 28817808 - 28817690
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  28817808 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 28817709  T
Q  392 aggctgcgtacaatacacc 410  Q
    |||||||||||||||||||    
T  28817708 aggctgcgtacaatacacc 28817690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 44530103 - 44530222
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||| | |||||| ||| ||||||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  44530103 gaggggtaaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaa 44530202  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  44530203 ggctgcgtacaatacaccaa 44530222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 292 - 414
Target Start/End: Complemental strand, 39461178 - 39461056
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||  |||| |||||||| ||||||||||||||||||| ||||||| ||||||||||| |||    
T  39461178 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagta 39461079  T
Q  392 aggctgcgtacaatacaccaata 414  Q
    |||||||||||||||||||||||    
T  39461078 aggctgcgtacaatacaccaata 39461056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 29521866 - 29521747
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||||||||||||| |||||||||| || ||| ||||||||||||| ||||||||||||||||||| |||||||  |||||||||||||||    
T  29521866 gaggggtaaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaa 29521767  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  29521766 ggctgcgtacaatacaccaa 29521747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 35261633 - 35261752
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||  |||||| ||||||||||||||||    
T  35261633 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaa 35261732  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    || |||||||||||||||||    
T  35261733 ggttgcgtacaatacaccaa 35261752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 12670429 - 12670312
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  ||||||||||||    
T  12670429 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaa 12670332  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  12670331 ggctgcgtacaatacaccaa 12670312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 292 - 414
Target Start/End: Original strand, 6760776 - 6760897
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||| ||||||||||||||||||||||| |||| | ||| ||||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  6760776 tgaggggtaac-ttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 6760874  T
Q  392 aggctgcgtacaatacaccaata 414  Q
    ||||| |||||||||||||||||    
T  6760875 aggcttcgtacaatacaccaata 6760897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 291 - 412
Target Start/End: Original strand, 13160654 - 13160774
Alignment:
Q  291 gtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt 390  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||| |||||||||||| |||||| ||||||| || |||||||||||    
T  13160654 gtgaggggtaacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaaacagggt 13160752  T
Q  391 aaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||    
T  13160753 aaggctgcgtacaatacaccaa 13160774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 292 - 414
Target Start/End: Original strand, 25250475 - 25250597
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||| |||||||||||| ||||||||||||||||| |||||| |||||||||||||  |||||||||||||||||| ||| ||| |||||||| ||||||    
T  25250475 tgagaggtaaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggta 25250574  T
Q  392 aggctgcgtacaatacaccaata 414  Q
     ||||||||||||||||||||||    
T  25250575 tggctgcgtacaatacaccaata 25250597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 30454277 - 30454159
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  |||||| ||||    
T  30454277 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacaaggta 30454180  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    ||||||||||| |||||||||    
T  30454179 aggctgcgtacgatacaccaa 30454159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 20869677 - 20869560
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||| |||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  ||||||||||||    
T  20869677 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaa 20869580  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||| ||||||||||||||    
T  20869579 ggctgtgtacaatacaccaa 20869560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 26954086 - 26954208
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggta 391  Q
    |||||||||| |||||| || ||||||||||||| |||||| | | ||||||||| ||||||||||||||||||| ||||||| || |||||||||||||    
T  26954086 gaggggtaactttggcgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggta 26954185  T
Q  392 aggctgcgtacaatacaccaata 414  Q
    |||||||||||||||||||||||    
T  26954186 aggctgcgtacaatacaccaata 26954208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 2626472 - 2626595
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt---aaaaaacagg 388  Q
    ||||||||||||||||||||| ||||||||||||| |||||| || | |||||||| ||||||||||||||||||| ||||||| ||   ||||||||||    
T  2626472 tgaggggtaaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagg 2626571  T
Q  389 gtaaggctgcgtacaatacaccaa 412  Q
    ||||| ||||||||||||||||||    
T  2626572 gtaagactgcgtacaatacaccaa 2626595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 17823529 - 17823649
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||| |||||||||||||||||||||||| |||||| || | |||||||| ||||||||||||||||||| ||||||| ||||||| |||| ||    
T  17823529 tgaggggtaatcttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggata 17823628  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    || ||||||| ||||||||||    
T  17823629 agactgcgtaaaatacaccaa 17823649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 18164941 - 18164822
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||| ||||||||||| ||| |||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| || ||||||||||||    
T  18164941 tgaggggtaatcttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggta 18164843  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    ||| |||||||||||||||||    
T  18164842 aggttgcgtacaatacaccaa 18164822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 45071219 - 45071337
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||  ||||||||||||||| |||||| | || |||||||| ||||||||| ||||||||| ||||||| || |||||||||||||    
T  45071219 gaggggtaaccttggcgatactggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgt-aaaaacagggtaa 45071317  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  45071318 ggctgcgtacaatacaccaa 45071337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 297 - 414
Target Start/End: Complemental strand, 20284250 - 20284131
Alignment:
Q  297 ggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt--aaaaaacagggtaagg 394  Q
    |||||||||| |||||| |||||||||||| |||||| |||| |||||||| ||||||||||||||||||| |||||||  |  |||||| |||||||||    
T  20284250 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaagg 20284151  T
Q  395 ctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||    
T  20284150 ctgcgtacaatacaccaata 20284131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 298 - 412
Target Start/End: Complemental strand, 8897940 - 8897826
Alignment:
Q  298 gtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctg 397  Q
    |||||| |||| ||||||||||||||||| |||||| || | |||||||| |||| ||||||||||||||||| |||| |||||||| |||||||||||     
T  8897940 gtaaccctggcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 8897841  T
Q  398 cgtacaatacaccaa 412  Q
    |||||||||||||||    
T  8897840 cgtacaatacaccaa 8897826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 297 - 414
Target Start/End: Complemental strand, 21070879 - 21070759
Alignment:
Q  297 ggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt---aaaaaacagggtaag 393  Q
    |||||||||| |||||| |||||||||||| |||||| |||| |||||||| ||||||||||||||||||| |||||||  |   |||||| ||||||||    
T  21070879 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaaagggtaag 21070780  T
Q  394 gctgcgtacaatacaccaata 414  Q
    |||||||||||||||||||||    
T  21070779 gctgcgtacaatacaccaata 21070759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 44781677 - 44781568
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||||| ||| || |||| ||| |||| ||||||||||||||||||||||||||| |||||| |||||||||||||| |||    
T  44781677 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaaggctgtgta 44781579  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  44781578 caatacaccaa 44781568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 302 - 395
Target Start/End: Original strand, 28407379 - 28407471
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| || ||||||||||||||||    
T  28407379 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggc 28407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 315 - 413
Target Start/End: Original strand, 22598133 - 22598231
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaat 413  Q
    |||||||||||| |||  | |||| |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  22598133 ggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaatacaccaat 22598231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 308 - 412
Target Start/End: Original strand, 12625858 - 12625963
Alignment:
Q  308 cgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaaggctgcgtacaata 406  Q
    ||||||||||||||||||| || ||| ||| | ||||||| || |||||||||||||||||||||||| || ||||||||||||||| |||| |||||||    
T  12625858 cgcaactggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaata 12625957  T
Q  407 caccaa 412  Q
    ||||||    
T  12625958 caccaa 12625963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 8484063 - 8483999
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaat 413  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  8484063 ggttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcgtacaatacaccaat 8483999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 24245405 - 24245478
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaac 366  Q
    ||||||||||||||| |||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||    
T  24245405 gaggggtaaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 318 - 411
Target Start/End: Original strand, 35105902 - 35105995
Alignment:
Q  318 aaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacacca 411  Q
    ||||||||| ||| ||  ||| |||||||| ||||||||||||||||||||||||||| |||||| | || |||||||||||||||||||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaaggctgcgtacaatacacca 35105995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 409
Target Start/End: Complemental strand, 40605089 - 40604970
Alignment:
Q  290 tgtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacaggg 389  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| | |||| | | |  |||||||||| ||||||||| || ||| ||||||||  ||     
T  40605089 tgtgaggggtaactttggcgcaactggtaaagttgttgtcatgtgattggatgattatgggttcaagtcatggaaacaatcttttgtgtaaaaaattgga 40604990  T
Q  390 taaggctgcgtacaatacac 409  Q
    ||||| ||||||||||||||    
T  40604989 taaggttgcgtacaatacac 40604970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 412
Target Start/End: Complemental strand, 44742698 - 44742581
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    ||||| |||||||| ||||| |||||||||||| ||  || | || |||||||   |||||||| |||||||||| ||| || |||||||||||||||||    
T  44742698 agggggaaccttggtgcaac-ggtaaagttgttgtcgcgtgattgtaaggtcatgagttcaagttctggaaacaatctcctgtgtaaaaaacagggtaag 44742600  T
Q  394 gctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||    
T  44742599 gctgcgtacaatacaccaa 44742581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 389644 - 389718
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgt--aaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||| ||||||||||||||||||| ||||||| ||  |||||||||||||||| |||||||||||||||||    
T  389644 aaggtcacgggttcaagtcctggaaacaccctcttgtgtcaaaaaaacagggtaaggttgcgtacaatacaccaa 389718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 5135414 - 5135351
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||| ||||||||||||||    
T  5135414 ggttcaagtcctggaaacagcctcttgtgtaaaaaagagggtaaggctgtgtacaatacaccaa 5135351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 42083870 - 42083761
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||| ||||| ||| || |||| |||||||| ||||||||||||||||||| ||| ||| ||||||||  ||| |||||||||||    
T  42083870 ccttggcgcaac-ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaaggctgcgta 42083772  T
Q  402 caatacaccaa 412  Q
    || || |||||    
T  42083771 cagtataccaa 42083761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 357 - 414
Target Start/End: Original strand, 20869941 - 20869998
Alignment:
Q  357 tcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaata 414  Q
    |||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  20869941 tcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaata 20869998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 412
Target Start/End: Complemental strand, 24365218 - 24365121
Alignment:
Q  316 gtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaa-cagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| |||||| |||  || ||||| |||||||| ||| |||||| ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggctgcgaacaatacaccaa 24365121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 414
Target Start/End: Complemental strand, 17251001 - 17250937
Alignment:
Q  350 gttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaata 414  Q
    ||||||||||||||| || ||||||| |||||||||||| |||||| ||||||||||||||||||    
T  17251001 gttcaagtcctggaagcagcctcttgtgtaaaaaacaggttaaggcagcgtacaatacaccaata 17250937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 412
Target Start/End: Original strand, 29877111 - 29877167
Alignment:
Q  356 gtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||    
T  29877111 gtcctggaaacagccttttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 29877167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 302 - 409
Target Start/End: Complemental strand, 14018140 - 14018034
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| ||||| |||||| ||| || | || |||||||  |||||||||| ||||||||  |||||| |||||||||||||| || |||||||    
T  14018140 ccttggcgcaac-ggtaatgttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggtgagactgcgta 14018042  T
Q  402 caatacac 409  Q
    ||||||||    
T  14018041 caatacac 14018034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 317 - 412
Target Start/End: Original strand, 36918102 - 36918197
Alignment:
Q  317 taaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| ||||| | ||| ||||| ||||||||  |||||||| ||||||||||  ||||  ||||||||||||||||||||| ||||||||||||||    
T  36918102 taaaattgttgttatggaactgaaaggtcacatgttcaagttctggaaacaatttcttatgtaaaaaacagggtaaggctgtgtacaatacaccaa 36918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 400
Target Start/End: Complemental strand, 30962944 - 30962847
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgt 400  Q
    |||||||||||| || ||||||||| |||||| | || ||||||||   ||||||||||||||||| ||||||| |||||||| ||||| |||||||||    
T  30962944 ccttggcgcaac-ggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaatagggttaggctgcgt 30962847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 5689641 - 5689704
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||| || ||| | ||||||| ||||||| ||||||||||||||||||||||||||||    
T  5689641 ggttcaagtcttgtaaatagcctcttgtgtaaaaagcagggtaaggctgcgtacaatacaccaa 5689704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 408
Target Start/End: Original strand, 31457155 - 31457241
Alignment:
Q  321 gttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaataca 408  Q
    |||||| ||||||  ||| |||||||| ||||||||||||| ||||||||||||| || ||||| |||  ||||||||||||||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgt-aaaaataggaaaaggctgcgtacaataca 31457241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 16225057 - 16225094
Alignment:
Q  377 gtaaaaaacagggtaaggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  16225057 gtaaaaaacagggtaagactgcgtacaatacaccaata 16225094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 23286475 - 23286434
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgt 333  Q
    ||||||||||||||| ||||||||||||||||||| ||||||    
T  23286475 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgt 23286434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 412
Target Start/End: Original strand, 43942348 - 43942397
Alignment:
Q  363 aaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||| ||||||  || |||||||||||||||||||||||||||||||||    
T  43942348 aaacagcctcttatgtcaaaaacagggtaaggctgcgtacaatacaccaa 43942397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 413
Target Start/End: Original strand, 10857869 - 10857903
Alignment:
Q  379 aaaaaacagggtaaggctgcgtacaatacaccaat 413  Q
    ||||||||||||||||||||| |||||||||||||    
T  10857869 aaaaaacagggtaaggctgcgcacaatacaccaat 10857903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 412
Target Start/End: Complemental strand, 11001109 - 11001011
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaa-cagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||| |||||| | || |||||| | ||||||| | ||| |||||||||  || |||||||| || | |||||||| ||||||||||||||    
T  11001109 ggtaaagttgttgtcatgtgattgaaaggtcgcgggttcaaattctgaaaacaacctactgtgtaaaaaaacaagataaggctgtgtacaatacaccaa 11001011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 23000362 - 23000281
Alignment:
Q  328 tcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||| |||| |||||||| |||  |||||||||||||| ||||||| || ||||||| ||||||| | | |||||||||||||    
T  23000362 tcatgtgactgaaaggtcacgggt--aagtcctggaaacagcctcttgtgt-aaaaacacggtaaggttccatacaatacaccaa 23000281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 326
Target Start/End: Original strand, 42840863 - 42840896
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgtt 326  Q
    |||||||||||||||||||||| |||||||||||    
T  42840863 gaggggtaaccttggcgcaactagtaaagttgtt 42840896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 6e-47; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 291 - 414
Target Start/End: Original strand, 38879533 - 38879656
Alignment:
Q  291 gtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt 390  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| |||||||  |||||||||||||    
T  38879533 gtgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggt 38879632  T
Q  391 aaggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||||||    
T  38879633 aaggctgcgtacaatacaccaata 38879656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 296 - 414
Target Start/End: Complemental strand, 4619284 - 4619166
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| | ||||||| |||||||||||||||||||    
T  4619284 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggc 4619185  T
Q  396 tgcgtacaatacaccaata 414  Q
    |||||||||||||||||||    
T  4619184 tgcgtacaatacaccaata 4619166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 41014272 - 41014391
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| || ||||||||||||    
T  41014272 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggta 41014370  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  41014371 aggctgcgtacaatacaccaa 41014391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 24448844 - 24448963
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||| ||| |||||||| |||||||    
T  24448844 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaa 24448943  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  24448944 ggctgcgtacaatacaccaa 24448963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 296 - 414
Target Start/End: Original strand, 27328709 - 27328827
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    ||||||||||| ||||| ||||||||||||| |||||| |||| |||||||| |||||||||||||||||||  |||||| |||||||||||||||||||    
T  27328709 gggtaaccttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggc 27328808  T
Q  396 tgcgtacaatacaccaata 414  Q
    |||||||||||||||||||    
T  27328809 tgcgtacaatacaccaata 27328827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 296 - 412
Target Start/End: Original strand, 43334159 - 43334276
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaagg 394  Q
    ||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| |||| || || ||||||||||||||||    
T  43334159 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaagg 43334258  T
Q  395 ctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||    
T  43334259 ctgcgtacaatacaccaa 43334276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 35710267 - 35710384
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||||| ||  |||| |||||||    
T  35710267 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaatagggtaa 35710364  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    |||||||| |||||||||||    
T  35710365 ggctgcgttcaatacaccaa 35710384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 23974734 - 23974840
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||||||||||| |||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||    
T  23974734 tgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaagagggta 23974832  T
Q  392 aggctgcg 399  Q
    ||||||||    
T  23974833 aggctgcg 23974840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 22600407 - 22600527
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||| || ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||  | ||| |||||| ||||||||    
T  22600407 tgaggggtaaccttgacgtaactggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggta 22600506  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||| ||||||||||||||    
T  22600507 aggctgtgtacaatacaccaa 22600527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 292 - 404
Target Start/End: Complemental strand, 37024736 - 37024626
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  |||||||||||    
T  37024736 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggta 37024639  T
Q  392 aggctgcgtacaa 404  Q
    |||||||||||||    
T  37024638 aggctgcgtacaa 37024626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 1565385 - 1565505
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggta 391  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||| | ||||||||||||||||||||||||||| || ||||||||   ||    
T  1565385 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaaaacatatta 1565484  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||| ||||||    
T  1565485 aggctgcgtacaatgcaccaa 1565505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 8170163 - 8170046
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||| |||||||||||||||||||||||||||| |||||| || | |||||||| ||||||||||||||||||| ||| ||| ||  ||||||||||||    
T  8170163 gagggctaaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgt--aaaacagggtaa 8170066  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  8170065 ggctgcgtacaatacaccaa 8170046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 22187238 - 22187358
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||| ||||||||||| ||||||||||| |||| | |||| ||||||||||||| |||||||||||||| ||||||| |||||||||| | ||    
T  22187238 tgaggggtaactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaacatgata 22187337  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    || ||||||||||||||||||    
T  22187338 agactgcgtacaatacaccaa 22187358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 412
Target Start/End: Original strand, 39301087 - 39301196
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||||| |||||| |||| |||||||| |||||||||| ||| |||||||||||| ||| |||||||||||||| ||||||    
T  39301087 ccttggcgcaac-ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggtaaggatgcgta 39301185  T
Q  402 caatacaccaa 412  Q
     ||| ||||||    
T  39301186 taatgcaccaa 39301196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 13801894 - 13801829
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaata 414  Q
    |||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13801894 ggttcaagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaata 13801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 32703413 - 32703495
Alignment:
Q  328 tcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||    
T  32703413 tcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggctgcgtacaatacaccaa 32703495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 412
Target Start/End: Original strand, 2838733 - 2838851
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactg-gaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||  ||||||||  | |||||||   |||||| | ||||| || |||||||||||||    
T  2838733 aggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgt-aaaaacagggtaa 2838831  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  2838832 ggctgcgtacaatacaccaa 2838851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 414
Target Start/End: Complemental strand, 12006500 - 12006390
Alignment:
Q  304 ttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccgg-ttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtac 402  Q
    |||||||||||| | |||||||| |||||| |||| |||||||| || |||||||| |||||||||||||||  |||||||| ||||||||||| | |||    
T  12006500 ttggcgcaactgctcaagttgttgtcatgtgactgaaaggtcacggggttcaagtc-tggaaacaacctcttatgtaaaaaatagggtaaggctccatac 12006402  T
Q  403 aatacaccaata 414  Q
    ||||||||||||    
T  12006401 aatacaccaata 12006390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 209098 - 208990
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||| | |||||||||||| |||||| |||  ||||||||  ||||||||||||| |||||||||||| || ||||||||||||||||||| |     
T  209098 ccttggcgcagc-ggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgt-aaaaacagggtaaggctgcatt 209001  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  209000 caatacaccaa 208990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 19143113 - 19143005
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    ||||||||||| ||||||| ||||| ||| || |||  || | ||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  19143113 ccttggcgcaa-tggtaaaattgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgt-aaaaacagggtaaggctgcgta 19143016  T
Q  402 caatacaccaa 412  Q
    || ||||||||    
T  19143015 cagtacaccaa 19143005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 28516593 - 28516500
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaataca 408  Q
    |||||||||||| ||| ||  ||| |||||||| |||||||||| |||||||| ||||||| |||||||||||| || ||||||||||||||||    
T  28516593 ggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtacaataca 28516500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 42924973 - 42924896
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| ||||||||  |||||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  42924973 actgaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgtacaatacaccaa 42924896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 412
Target Start/End: Original strand, 1405170 - 1405260
Alignment:
Q  322 ttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||| |||||| ||| ||||||||| ||||||||||||||||||||||||||   ||||||| || |||||  |||||||||||||||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaagtttgcgtacaatacaccaa 1405260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 413
Target Start/End: Original strand, 41425952 - 41426022
Alignment:
Q  343 gtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaat 413  Q
    ||||| ||||||||| ||||||||||| | ||| |||||||||||||||||||||| ||||||||||||||    
T  41425952 gtcacgggttcaagttctggaaacaacttattgtgtaaaaaacagggtaaggctgcatacaatacaccaat 41426022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 412
Target Start/End: Original strand, 43574617 - 43574679
Alignment:
Q  350 gttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| |||||    
T  43574617 gttcaagtcctggaaacaatctcttgtgtagaaaacagggtaaggctgcgtacaatataccaa 43574679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 414
Target Start/End: Original strand, 20135623 - 20135679
Alignment:
Q  358 cctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaata 414  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||    
T  20135623 cctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaata 20135679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 397
Target Start/End: Original strand, 22025539 - 22025601
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctg 397  Q
    |||| |||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  22025539 actgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 22025601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 299 - 409
Target Start/End: Original strand, 30006285 - 30006395
Alignment:
Q  299 taaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgc 398  Q
    |||| |||||||||||| |||| ||||| |||||| |||| |||||||  | ||||||||| | ||||||||||||   |||| |||||||||||||||     
T  30006285 taacattggcgcaactgataaatttgttgtcatgtgactgaaaggtcatagattcaagtccggaaaacaacctcttatataaacaacagggtaaggctgt 30006384  T
Q  399 gtacaatacac 409  Q
    ||||| |||||    
T  30006385 gtacattacac 30006395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 413
Target Start/End: Original strand, 7368413 - 7368470
Alignment:
Q  354 aagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaat 413  Q
    |||||||||||||| ||||||| ||||||  |||||||||||||||||||||||||||||    
T  7368413 aagtcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaat 7368470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 364 - 412
Target Start/End: Complemental strand, 16880757 - 16880709
Alignment:
Q  364 aacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  16880757 aacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 16880709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 382
Target Start/End: Complemental strand, 22861850 - 22861758
Alignment:
Q  290 tgtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaa 382  Q
    ||||| ||||||||||||| |||||| |||||||||| |||||| |||| |||||||| | |||||||||| ||| ||  |||||| ||||||    
T  22861850 tgtgaagggtaaccttggcacaactgataaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaa 22861758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 29334415 - 29334467
Alignment:
Q  359 ctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacacca 411  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  29334415 ctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacacca 29334467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 409
Target Start/End: Complemental strand, 10634317 - 10634211
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| ||| |||||||| ||| || |||| |||||||  |||||||||||| ||||||||||| || | ||||| ||||||||||||  |||    
T  10634317 ccttggcgcaac-ggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaacctcgtgtgcaaaaatcagggtaaggctcggta 10634219  T
Q  402 caatacac 409  Q
     |||||||    
T  10634218 aaatacac 10634211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 24323862 - 24323767
Alignment:
Q  317 taaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||| ||| |||| || ||||   |||||||| ||||||||||||||||| |||||| ||||||||||  |||||| ||||| ||||    
T  24323862 taaagttgttatcgtgtgactgaaatgtcaaatgttcaagttctggaaacaacctcttgtgtaaaagacagggtaagcttgcgtataatactccaa 24323767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 24360486 - 24360391
Alignment:
Q  317 taaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||| ||| |||| || ||||   |||||||| ||||||||||||||||| |||||| ||||||||||  |||||| ||||| ||||    
T  24360486 taaagttgttatcgtgtgactgaaatgtcaaatgttcaagttctggaaacaacctcttgtgtaaaagacagggtaagcttgcgtataatactccaa 24360391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 408
Target Start/End: Original strand, 31299591 - 31299700
Alignment:
Q  298 gtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctg 397  Q
    |||||||||| |||||||||||||||||| |||||| |||   |||||||  ||||||||||| |||||| |||||||  |  ||||||| ||||  |||    
T  31299591 gtaaccttggtgcaactggtaaagttgttgtcatgtgacttacaggtcactagttcaagtcctagaaacagcctcttgtat-taaaacagtgtaaaactg 31299689  T
Q  398 cgtacaataca 408  Q
    |||||||||||    
T  31299690 cgtacaataca 31299700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 408
Target Start/End: Original strand, 1850624 - 1850708
Alignment:
Q  323 tgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaataca 408  Q
    |||| |||||| |||| |||||||| ||||||||||| ||||| ||||||||| || ||||||||  ||||| |||||||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgt-aaaaacagaataagggtgcgtacaataca 1850708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 34074701 - 34074624
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| ||||||||  ||||||||||| |||||| ||||||| ||||||||||  |||||| ||||| |||||||||||    
T  34074701 actgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaaacacagtaaggttgcgttcaatacaccaa 34074624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 19438703 - 19438741
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcat 331  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  19438703 gaggggtaaccttggcgcaactggtaaagttgttgtcat 19438741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 12575779 - 12575723
Alignment:
Q  357 tcctggaaacaacctcttgcgtaaa-aaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| ||||||||||||| ||||||| ||| | |||||||||||||||||    
T  12575779 tcctggaaacagcctcttgcgtaaataaacaggctaaagttgcgtacaatacaccaa 12575723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 39079937 - 39079875
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaa 365  Q
    |||||||||||| |||||||||||| |||||| || | |||||||| |||||||||| ||||||    
T  39079937 ccttggcgcaac-ggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 41956885 - 41956924
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcat 331  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  41956885 tgaggggtaacattggcgcaactggtaaagttgttgtcat 41956924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 22908008 - 22907927
Alignment:
Q  330 atgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| |||| |||||||  |||||||||||  |||||| ||||||| || |||||||| |||||| ||| |||||||||||||    
T  22908008 atgtgactgaaaggtcaagggttcaagtccaagaaacagcctcttgtgt-aaaaacagagtaaggttgcatacaatacaccaa 22907927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 412
Target Start/End: Complemental strand, 7097870 - 7097822
Alignment:
Q  363 aaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||| ||||||| ||||||| |||||||||| |||||||||||||||||    
T  7097870 aaacagcctcttgtgtaaaaa-cagggtaaggttgcgtacaatacaccaa 7097822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 6e-47; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 8455497 - 8455378
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||| |||||||||    
T  8455497 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaa 8455398  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  8455397 ggctgcgtacaatacaccaa 8455378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 292 - 414
Target Start/End: Original strand, 14530271 - 14530393
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| |||||||  ||||||||||||||    
T  14530271 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta 14530370  T
Q  392 aggctgcgtacaatacaccaata 414  Q
    ||||| |||||||||||||||||    
T  14530371 aggctacgtacaatacaccaata 14530393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 12024099 - 12023981
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| || |||||||||||||    
T  12024099 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaa 12024001  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  12024000 ggctgcgtacaatacaccaa 12023981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 294 - 412
Target Start/End: Original strand, 10543653 - 10543771
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    |||||||||||||||||||||| |||||||||| |||||| |||| |||||||| ||||||||||||||||||  ||||||| |||||||||||||||||    
T  10543653 aggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaag 10543752  T
Q  394 gctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||    
T  10543753 gctgcgtacaatacaccaa 10543771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 295 - 412
Target Start/End: Original strand, 11514392 - 11514509
Alignment:
Q  295 ggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaagg 394  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||||| ||||||| ||||||||||  ||||||    
T  11514392 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaagg 11514491  T
Q  395 ctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||    
T  11514492 ctgcgtacaatacaccaa 11514509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 294 - 412
Target Start/End: Complemental strand, 24200805 - 24200687
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    |||||||||||||  |||||||||||||||||| |||||| |||| || ||||| ||||||||||||||||||| ||||||| |||||||||||||||||    
T  24200805 aggggtaaccttgatgcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 24200706  T
Q  394 gctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||    
T  24200705 gctgcgtacaatacaccaa 24200687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 292 - 410
Target Start/End: Complemental strand, 25079900 - 25079781
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggt 390  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||| | |||||||||||||| || |||||||| |||    
T  25079900 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaaacaaggt 25079801  T
Q  391 aaggctgcgtacaatacacc 410  Q
    |||| |||||||||||||||    
T  25079800 aaggatgcgtacaatacacc 25079781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 310 - 412
Target Start/End: Original strand, 17667973 - 17668075
Alignment:
Q  310 caactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacac 409  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  17667973 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacac 17668072  T
Q  410 caa 412  Q
    |||    
T  17668073 caa 17668075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 412
Target Start/End: Original strand, 17623535 - 17623637
Alignment:
Q  310 caactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacac 409  Q
    ||||||||||||||||| |||||  ||||||||||||| |||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  17623535 caactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacac 17623634  T
Q  410 caa 412  Q
    |||    
T  17623635 caa 17623637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 293 - 411
Target Start/End: Original strand, 17705449 - 17705567
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||| ||||||||| ||||||||||||||||||  ||||||| ||||| ||||| ||||    
T  17705449 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagtaa 17705548  T
Q  393 ggctgcgtacaatacacca 411  Q
    ||||| |||||||||||||    
T  17705549 ggctgtgtacaatacacca 17705567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 291 - 412
Target Start/End: Complemental strand, 21779442 - 21779323
Alignment:
Q  291 gtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt 390  Q
    ||||||||||||||||||||||||||| |||||||| |||||| |||| |||||||| ||||||||||||||| ||| ||||||| ||  ||||||||||    
T  21779442 gtgaggggtaaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgt--aaaacagggt 21779345  T
Q  391 aaggctgcgtacaatacaccaa 412  Q
    |||| |||||||||||||||||    
T  21779344 aaggttgcgtacaatacaccaa 21779323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 22371010 - 22371127
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||||| |||| ||    ||||||||||||    
T  22371010 tgaggggtaaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctcgtg---taaaaacagggta 22371106  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  22371107 aggctgcgtacaatacaccaa 22371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 5840982 - 5841103
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||||| |||| || |||||||||| |||||| ||||||||||||| |||||||||||| |||||| ||| ||| |||||||| |||||||    
T  5840982 gaggggtaaccttggtgcaaatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaa 5841081  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    || ||||||||||||| |||||    
T  5841082 ggatgcgtacaatacatcaata 5841103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 9671134 - 9671252
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactgg-aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||| |||||||||||| |||||| ||||| || ||||| ||||||| ||||||||||| ||||||| ||  |||||||||||    
T  9671134 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgt--aaaacagggta 9671231  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  9671232 aggctgcgtacaatacaccaa 9671252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 23397719 - 23397837
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||| |||||||  ||||||||||||||||||| ||||||| ||  |||| ||||||    
T  23397719 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgt--aaaatagggta 23397816  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    ||||| |||||||||||||||    
T  23397817 aggctacgtacaatacaccaa 23397837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 293 - 409
Target Start/End: Original strand, 7214488 - 7214604
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||| ||||| ||||||||||||||||| |||||| |||| |||||||  |||||||||| ||||||||  |||||| |||||| |||||||||    
T  7214488 gaggggtaactttggcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaa 7214587  T
Q  393 ggctgcgtacaatacac 409  Q
    |||||||||||||||||    
T  7214588 ggctgcgtacaatacac 7214604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 296 - 412
Target Start/End: Complemental strand, 25249915 - 25249800
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    ||||||||||||||||| ||||||||||||| |||||| |||| |||||||| |||||||||| ||||||||  |||||| || | ||||||||||||||    
T  25249915 gggtaaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgt-acaaacagggtaaggc 25249817  T
Q  396 tgcgtacaatacaccaa 412  Q
    |||||||||||||||||    
T  25249816 tgcgtacaatacaccaa 25249800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 314 - 413
Target Start/End: Complemental strand, 40417031 - 40416932
Alignment:
Q  314 tggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaat 413  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||  |||||||||||| ||||||| |||||||||||||||    
T  40417031 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctgtgtacaatacaccaat 40416932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 412
Target Start/End: Original strand, 17896215 - 17896333
Alignment:
Q  295 ggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaag 393  Q
    |||||||||||| ||||||||||||||||||| |||||| || | |||||||| | |||||||||| |||||||||||||| || |||||| ||||||||    
T  17896215 ggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaag 17896314  T
Q  394 gctgcgtacaatacaccaa 412  Q
    ||||||||||||| |||||    
T  17896315 gctgcgtacaatataccaa 17896333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 305 - 410
Target Start/End: Complemental strand, 39914475 - 39914369
Alignment:
Q  305 tggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaaggctgcgtaca 403  Q
    ||||||| |||||||||||||| |||||| ||||||||||||| || |||||| ||||||||||||||||| || |||||||||||||||| || |||||    
T  39914475 tggcgcatctggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaaggatgtgtaca 39914376  T
Q  404 atacacc 410  Q
    |||||||    
T  39914375 atacacc 39914369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 412
Target Start/End: Complemental strand, 19977893 - 19977776
Alignment:
Q  295 ggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaagg 394  Q
    ||||||||||||||| ||||||| |||||||| |||||| || | |||||||| ||||||||| ||||||||| ||||||  |||||||| ||| |||||    
T  19977893 ggggtaaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataagg 19977794  T
Q  395 ctgcgtacaatacaccaa 412  Q
     |||||||||||||||||    
T  19977793 ttgcgtacaatacaccaa 19977776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 27573581 - 27573693
Alignment:
Q  299 taaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgc 398  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||  ||||||||||| || |||| ||||||| || | ||||| |||||||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgt-ataaacatggtaaggctgc 27573679  T
Q  399 gtacaatacaccaa 412  Q
    ||||||||||||||    
T  27573680 gtacaatacaccaa 27573693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 317 - 412
Target Start/End: Original strand, 5450263 - 5450359
Alignment:
Q  317 taaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||| |||||| |||| |||||||| ||||||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctgcgtacaatacaccaa 5450359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 294 - 412
Target Start/End: Complemental strand, 32781467 - 32781350
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    ||||| ||||||||||||| |||||||||||||   ||||  ||| ||||||||  |||||||||  ||||||||||||||| |||||||||||||||||    
T  32781467 agggggaaccttggcgcaa-tggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaag 32781369  T
Q  394 gctgcgtacaatacaccaa 412  Q
     ||||||||||||||||||    
T  32781368 actgcgtacaatacaccaa 32781350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 315 - 404
Target Start/End: Original strand, 33795261 - 33795350
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaa 404  Q
    |||||||||||| ||| || | || |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  33795261 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgtacaa 33795350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 44604826 - 44604907
Alignment:
Q  311 aactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    ||||| |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  44604826 aactgctaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgt-aaaaacagggtaag 44604907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 294 - 406
Target Start/End: Original strand, 14544018 - 14544131
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgta-aaaaacagggtaa 392  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||| ||||| || ||| || || ||||||||| ||||||| ||| |||||||||||||    
T  14544018 aggggtaaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgtagaaaaacagggtaa 14544117  T
Q  393 ggctgcgtacaata 406  Q
    | |||||| |||||    
T  14544118 gactgcgtgcaata 14544131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 412
Target Start/End: Complemental strand, 24860157 - 24860050
Alignment:
Q  303 cttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtac 402  Q
    |||||||||||||||||| ||||| |||||| |||||||||| || |||| ||| |||||||||||||||| | || ||||||| ||| |||||||||||    
T  24860157 cttggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgt-aaaaacatggt-aggctgcgtac 24860060  T
Q  403 aatacaccaa 412  Q
    ||||||||||    
T  24860059 aatacaccaa 24860050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 412
Target Start/End: Complemental strand, 29420048 - 29419947
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacaggg----taaggctgcgtacaatacacc 410  Q
    |||||||||||| |||  | |||| ||||||||  |||||||||||||||||||||||||| |||||||||||||    |||||||||||||||||||||    
T  29420048 ggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagtaaggctgcgtacaatacacc 29419949  T
Q  411 aa 412  Q
    ||    
T  29419948 aa 29419947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 99434 - 99327
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| | |||||||||| ||| || |||| |||||||| |||||||||||| |||||| ||||||  |||||||||| || |||||||||||    
T  99434 ccttggcgcaacag-taaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctctt--gtaaaaaacatggcaaggctgcgta 99338  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  99337 caatacaccaa 99327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 413
Target Start/End: Complemental strand, 4516522 - 4516412
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||||| ||| || |||| ||||||||   ||||||| || |||||| ||||||| ||||||||||||| || ||||||||    
T  4516522 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggcaacgctgcgta 4516424  T
Q  402 caatacaccaat 413  Q
    ||||||||||||    
T  4516423 caatacaccaat 4516412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 10546153 - 10546236
Alignment:
Q  330 atgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaa-aacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| |||| |||||||| ||||||||||||||||||| |||||||  ||||| ||||||||||||||||||||||||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaa 10546236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 14444720 - 14444801
Alignment:
Q  330 atgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||||| || |||||||||||||||||| |||| |||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgtgtacgatacaccaa 14444801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 328 - 414
Target Start/End: Original strand, 19614981 - 19615067
Alignment:
Q  328 tcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaata 414  Q
    |||||| |||| |||||||| |||||||||||| |||||| |||||||  |||||||||||||||| |||||||||||| |||||||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgtacaatataccaata 19615067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 44521544 - 44521435
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||| ||| |||||||||||||||| || |||| ||||||||  |||||| || ||||||||| |||||| |||||||||| ||||||||||| ||    
T  44521544 ccttggcggaac-ggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaaggctgcata 44521446  T
Q  402 caatacaccaa 412  Q
     ||||||||||    
T  44521445 taatacaccaa 44521435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 412
Target Start/End: Complemental strand, 21377232 - 21377135
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||| |||||| |||| ||||| ||  ||||||||| | |||||| ||||||| ||||||||||||||||||||| ||||||| ||||||    
T  21377232 ggtaaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggtaaggctgggtacaatgcaccaa 21377135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 406
Target Start/End: Complemental strand, 26684803 - 26684688
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaaca-acctcttgcgt-aaaaaacagggt 390  Q
    |||||||||| || |||||||||||||||||||| |||||| | || |||||||  |||| |||||||| ||||| |||||||| || |||||| | |||    
T  26684803 gaggggtaactttagcgcaactggtaaagttgttgtcatgtgattgaaaggtcaaaggtttaagtcctgaaaacagacctcttgtgtaaaaaaatatggt 26684704  T
Q  391 aaggctgcgtacaata 406  Q
    ||||||||||||||||    
T  26684703 aaggctgcgtacaata 26684688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 23145837 - 23145759
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaat 413  Q
    |||| |||||||| |||||||||| || |||||  |||||| ||||||||||| |||||||||||||||||||||||||    
T  23145837 actgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaat 23145759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 23557627 - 23557549
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaat 413  Q
    |||| |||||||| |||||||||| || |||||  |||||| ||||||||||| |||||||||||||||||||||||||    
T  23557627 actgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgtacaatacaccaat 23557549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 405
Target Start/End: Original strand, 44643486 - 44643589
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaaggctgcgt 400  Q
    ||||||||||| |||||||||||| ||||||| |||| ||||||||  |||||||| || |||| | |||||| ||| ||||||||| ||||||||||||    
T  44643486 ccttggcgcaa-tggtaaagttgtcatcatgtgactgaaaggtcacgtgttcaagttctagaaagagcctcttccgtaaaaaaacagagtaaggctgcgt 44643584  T
Q  401 acaat 405  Q
    |||||    
T  44643585 acaat 44643589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 2003676 - 2003602
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaa-aaaacagggtaaggctgcgtacaataca 408  Q
    |||| |||||||| ||| ||||||||||||||| || ||||||||| |||||||||||||| |||||||||||||    
T  2003676 actgaaaggtcacgggtacaagtcctggaaacagccccttgcgtaaaaaaacagggtaaggatgcgtacaataca 2003602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 17380407 - 17380299
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    ||||||||||| |||  |||||||| |||||| || | |||||||| |||||||||| |||||||||||||||| || | ||||||||||||| || ||     
T  17380407 ccttggcgcaa-tggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgt-ataaacagggtaaggttgtgtg 17380310  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  17380309 caatacaccaa 17380299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 412
Target Start/End: Complemental strand, 44449529 - 44449446
Alignment:
Q  328 tcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| ||||||||  |||||| ||||  |||||||||||||  | ||||||||| |||||||||||||||||||||||    
T  44449529 tcatgtaactgaaaggtcacgagttcaa-tcctaaaaacaacctcttgaatgaaaaacaggataaggctgcgtacaatacaccaa 44449446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 15296532 - 15296469
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| ||||||| ||| ||| |||||| ||||||||||||||||||||||| |||||    
T  15296532 ggttcaagtcccggaaacagcctgttgtgtaaaatacagggtaaggctgcgtacaatataccaa 15296469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 31158598 - 31158503
Alignment:
Q  317 taaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||| |||||| |||| |||||||  |||| ||||| |  ||||| |||||||||||||||||||||||||  ||| ||||||| |||||    
T  31158598 taaagttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggtaagattgcatacaataaaccaa 31158503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 338
Target Start/End: Complemental strand, 39189603 - 39189557
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 338  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  39189603 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 39189557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 36871509 - 36871565
Alignment:
Q  355 agtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||| ||||||| || |||| ||||||||||||||||||||||||||||    
T  36871509 agtcctggaaacagcctcttgtgtgaaaa-cagggtaaggctgcgtacaatacaccaa 36871565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 40762349 - 40762296
Alignment:
Q  359 ctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||| ||||||| ||||||||| |||||||||| |||||||||||||||    
T  40762349 ctggaaacagcctcttgtgtaaaaaactgggtaaggctacgtacaatacaccaa 40762296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 25641491 - 25641574
Alignment:
Q  328 tcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||| |||| |||||||| ||||||||||||||||||| | | ||| ||  |||||||||||| | |||||||||||||||||    
T  25641491 tcatgtgactgaaaggtcacgggttcaagtcctggaaacagcattttgtgt-gaaaacagggtaaagttgcgtacaatacaccaa 25641574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 420
Target Start/End: Original strand, 17471542 - 17471630
Alignment:
Q  333 taactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaa-cagggtaaggctgcgtacaatacaccaatatgatga 420  Q
    |||||| || ||||| ||||||||||   |||||| ||||||| |||||||| |||| |||| |||||||||||| ||||| |||||||    
T  17471542 taactgaaatgtcacaggttcaagtctcagaaacagcctcttgtgtaaaaaaacaggataagactgcgtacaatataccaaaatgatga 17471630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 412
Target Start/End: Original strand, 25632547 - 25632582
Alignment:
Q  377 gtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||| |||||||||||||||||||||||    
T  25632547 gtaaaaaacaggataaggctgcgtacaatacaccaa 25632582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 375
Target Start/End: Complemental strand, 34752820 - 34752761
Alignment:
Q  316 gtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttg 375  Q
    ||||| |||||||||||| |||| ||||||||   ||||||| |||||||||||||||||    
T  34752820 gtaaacttgttatcatgtgactgaaaggtcacgaattcaagttctggaaacaacctcttg 34752761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 333
Target Start/End: Complemental strand, 39499390 - 39499355
Alignment:
Q  298 gtaaccttggcgcaactggtaaagttgttatcatgt 333  Q
    |||| |||||||||||||||||||||||||||||||    
T  39499390 gtaatcttggcgcaactggtaaagttgttatcatgt 39499355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 412
Target Start/End: Original strand, 30826052 - 30826109
Alignment:
Q  354 aagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||| |||||||| ||||||| |||||||  ||||||||| |||||||||||||||||    
T  30826052 aagtcttggaaacagcctcttgtgtaaaaat-agggtaaggttgcgtacaatacaccaa 30826109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 338
Target Start/End: Complemental strand, 27466311 - 27466266
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactg 338  Q
    |||| ||||| ||||||||||||||||||||||| |||||| ||||    
T  27466311 gaggcgtaacattggcgcaactggtaaagttgttgtcatgtgactg 27466266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 12315785 - 12315714
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||  ||||||||| |||||||| | ||||   |||||||||||||||| ||| ||||||||||||||    
T  12315785 aaggtcacgagttcaagtcatggaaacagcttcttat-taaaaaacagggtaagactgtgtacaatacaccaa 12315714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 1e-45; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 293 - 410
Target Start/End: Original strand, 46991781 - 46991898
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  46991781 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaa 46991880  T
Q  393 ggctgcgtacaatacacc 410  Q
    ||||| ||||||||||||    
T  46991881 ggctgtgtacaatacacc 46991898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 18944620 - 18944739
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||| |||||||||| ||||||| ||||||||||||||||    
T  18944620 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaa 18944719  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  18944720 ggctgcgtacaatacaccaa 18944739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 293 - 414
Target Start/End: Complemental strand, 20004273 - 20004152
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||| | |||||||||| |||||    
T  20004273 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaa 20004174  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||||    
T  20004173 ggctgcgtacaatacaccaata 20004152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 299 - 414
Target Start/End: Complemental strand, 30395903 - 30395788
Alignment:
Q  299 taaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgc 398  Q
    |||||||||||||||||||||||||||| |||||| |||  |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 30395804  T
Q  399 gtacaatacaccaata 414  Q
    ||||||||||||||||    
T  30395803 gtacaatacaccaata 30395788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 32632737 - 32632619
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||| | |||| |||||||| ||||||||||||||||||| ||||||| || |||||||||||||    
T  32632737 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaa 32632639  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  32632638 ggctgcgtacaatacaccaa 32632619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 292 - 409
Target Start/End: Complemental strand, 34725278 - 34725163
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  |||||||||||    
T  34725278 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggta 34725181  T
Q  392 aggctgcgtacaatacac 409  Q
    ||||||||||||||||||    
T  34725180 aggctgcgtacaatacac 34725163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 296 - 412
Target Start/End: Complemental strand, 23768498 - 23768382
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    ||||||||| | ||||||||||||||||||| |||||| |||| |||||||| |||||||||| |||||||| ||||||| |||||||||||||||||||    
T  23768498 gggtaacctcgacgcaactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggc 23768399  T
Q  396 tgcgtacaatacaccaa 412  Q
    |||||||||||||||||    
T  23768398 tgcgtacaatacaccaa 23768382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 41319988 - 41319868
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||| | ||||||||||||||||| |||||| |||| |||||||| |||| ||||||||||||||  |||||| |||||||||||||||    
T  41319988 tgaggggtaaccttgacacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggta 41319889  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  41319888 aggctgcgtacaatacaccaa 41319868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 46248134 - 46248015
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||| ||||||||||||||||| |||||| |||| || ||||| |||||||||| |||||||| ||||||| ||||||||||||||||    
T  46248134 gaggggtaaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaa 46248035  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    | ||||||||||||||||||    
T  46248034 gactgcgtacaatacaccaa 46248015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 14617014 - 14617134
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||| ||||||||  |||||||||||||||||| ||||||| ||||| |||| ||||    
T  14617014 tgaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggta 14617113  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    ||| |||||||||||||||||    
T  14617114 aggttgcgtacaatacaccaa 14617134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 10668197 - 10668323
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaa-----ctggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacag 387  Q
    |||||||||||||||||||||||||||||||||| |||||| |     ||| |||||||| ||||||||||||||||||| ||||||| ||||||||||     
T  10668197 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaa 10668296  T
Q  388 ggtaaggctgcgtacaatacaccaata 414  Q
    ||||||| |||||||||||||||||||    
T  10668297 ggtaaggttgcgtacaatacaccaata 10668323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 303 - 412
Target Start/End: Complemental strand, 18724715 - 18724607
Alignment:
Q  303 cttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtac 402  Q
    ||||||||||| |||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||    
T  18724715 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtac 18724617  T
Q  403 aatacaccaa 412  Q
    ||||||||||    
T  18724616 aatacaccaa 18724607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 291 - 412
Target Start/End: Original strand, 27201622 - 27201743
Alignment:
Q  291 gtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt 390  Q
    ||||||||||||||| ||| || ||||||||||||| |||||| |||| |||||||  ||||||||||||||||||| ||||||| || | |||||||||    
T  27201622 gtgaggggtaaccttagcgtaaatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggt 27201721  T
Q  391 aaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||    
T  27201722 aaggctgcgtacaatacaccaa 27201743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 38478461 - 38478344
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||| ||||| ||||| |||||| |||| |||||||| |||||||||||| |||||| ||||||| ||  ||||||||||||    
T  38478461 gaggggtaaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgt--aaaacagggtaa 38478364  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  38478363 ggctgcgtacaatacaccaa 38478344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 19932934 - 19932817
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||| |||||||||||||||||||||||||| |||||| |||| |||||||  |||||||||  |||| ||||||| ||| |||||||||||||||    
T  19932934 tgaggggttaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt--tggatacaacct-ttgtgtaaaaaacagggta 19932838  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  19932837 aggctgcgtacaatacaccaa 19932817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 47214488 - 47214605
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||| |||||||| |||||||||||||||||||  |||||  ||  ||||||||||||    
T  47214488 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctctt--gtttaaaacagggtaa 47214585  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    || |||||||||||||||||    
T  47214586 ggttgcgtacaatacaccaa 47214605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 312 - 410
Target Start/End: Original strand, 6925096 - 6925194
Alignment:
Q  312 actggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacacc 410  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| | ||||||| |||||||| |||||||||||||| ||||||||||    
T  6925096 actggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacacc 6925194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 291 - 412
Target Start/End: Original strand, 8197018 - 8197139
Alignment:
Q  291 gtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt 390  Q
    ||||||||||||||||| ||||||||| |||||||| |||||| |||| |||||||| |||||||||||||| ||   ||||||| |||||||||| |||    
T  8197018 gtgaggggtaaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggt 8197117  T
Q  391 aaggctgcgtacaatacaccaa 412  Q
    |||||| |||||| ||||||||    
T  8197118 aaggctacgtacagtacaccaa 8197139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 45812716 - 45812599
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||||||||||||| |||||||||| |||||| |||| |||||||| ||||||||||||| |||||  |||||| ||  |||| |||||||    
T  45812716 gaggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgt--aaaagagggtaa 45812619  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    |||||| |||||||||||||    
T  45812618 ggctgcatacaatacaccaa 45812599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 4430207 - 4430088
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||| ||| ||||||||| |||||||||||||| |||||| ||||||||||||| |||| ||||| || |||||   ||||| ||||||||||||||||    
T  4430207 gagggttaatcttggcgcagctggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaa 4430108  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    | ||||||||||||||||||    
T  4430107 gactgcgtacaatacaccaa 4430088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 22930248 - 22930131
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||  ||||||||||||||||||| ||| ||| || |||||||||||||    
T  22930248 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgt-aaaaacagggtaa 22930150  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    || || | ||||||||||||    
T  22930149 ggttgtg-acaatacaccaa 22930131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 290 - 409
Target Start/End: Original strand, 27474255 - 27474373
Alignment:
Q  290 tgtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacaggg 389  Q
    |||||||||||||||| || ||||||||||||||||| |||||| |||| |||||||| |||||||||| ||||||||  |||||| || ||||||||||    
T  27474255 tgtgaggggtaaccttagctcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgt-aaaaacaggg 27474353  T
Q  390 taaggctgcgtacaatacac 409  Q
     || ||||||||||||||||    
T  27474354 caaagctgcgtacaatacac 27474373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 299 - 412
Target Start/End: Complemental strand, 12127010 - 12126899
Alignment:
Q  299 taaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgc 398  Q
    |||||||||||||||| ||||||||||| |||||||| || |||||||| |||| |||| ||||||||| | ||||| ||  ||||||||||||||||||    
T  12127010 taaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgt--aaaacagggtaaggctgc 12126913  T
Q  399 gtacaatacaccaa 412  Q
    ||||||||||||||    
T  12126912 gtacaatacaccaa 12126899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 412
Target Start/End: Original strand, 22327086 - 22327195
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| || ||||||||| |||||| |||| |||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  22327086 ccttggcgcaac-ggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgtgta 22327184  T
Q  402 caatacaccaa 412  Q
    | || ||||||    
T  22327185 cgatgcaccaa 22327195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 316 - 412
Target Start/End: Complemental strand, 25468421 - 25468325
Alignment:
Q  316 gtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| |||||| | || |||||||  ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacaccaa 25468325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 2435958 - 2435849
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||||| ||| || |||| |||||||| ||||||||||||||||||| |||| || || ||||| |||||||| |||||||    
T  2435958 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaagcctgcgta 2435860  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  2435859 caatacaccaa 2435849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 299 - 412
Target Start/End: Original strand, 9939443 - 9939557
Alignment:
Q  299 taaccttggcgcaactggtaaa-gttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctg 397  Q
    ||||||||||||||| |||||| |||||| |||||| |||| ||||||||  ||||||||||||||||||||||||||  ||| ||||| ||||||| ||    
T  9939443 taaccttggcgcaaccggtaaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttg 9939542  T
Q  398 cgtacaatacaccaa 412  Q
    ||| |||||||||||    
T  9939543 cgtgcaatacaccaa 9939557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 17470517 - 17470408
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||| ||||| |||||||||||| ||| || |||| | |||||  |||||||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  17470517 ccttggtgcaac-ggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 17470419  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  17470418 caatacaccaa 17470408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 294 - 412
Target Start/End: Original strand, 24564322 - 24564440
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    ||||||||||||||||||||  ||||||||| | || ||| | || |||||| | | |||||||| |||||||||||||||| |||||||||||||||||    
T  24564322 aggggtaaccttggcgcaaccagtaaagttgatgtcttgtgattgaaaggtcgcagattcaagtcttggaaacaacctcttgtgtaaaaaacagggtaag 24564421  T
Q  394 gctgcgtacaatacaccaa 412  Q
    | |||||||||| ||||||    
T  24564422 ggtgcgtacaattcaccaa 24564440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 315 - 412
Target Start/End: Complemental strand, 35117927 - 35117830
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||| ||| || |||| |||||||| ||||||||||||||||| | ||||||| |||||| |||||||||||||| ||||||||||||||    
T  35117927 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctgtgtacaatacaccaa 35117830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 44485290 - 44485171
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||| | |||||||||||| | |||||||||| |||||| | || |||||||| ||||  |||||||||||||||| |||| |||||| ||| ||||    
T  44485290 tgagggggagccttggcgcaacag-taaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggta 44485192  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  44485191 aggctgcgtacaatacaccaa 44485171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 395
Target Start/End: Original strand, 25290143 - 25290244
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaa--acaacctcttgcgtaaaaaacagggtaag 393  Q
    |||||||||||||||||| |||||||||||| |||||| |||| ||||||||  ||||||||| |||||  ||| ||||||| |||||||||||||||||    
T  25290143 gggtaaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaag 25290242  T
Q  394 gc 395  Q
    ||    
T  25290243 gc 25290244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 412
Target Start/End: Original strand, 45402077 - 45402192
Alignment:
Q  298 gtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt--aag-g 394  Q
    ||||||||||||||||||||||||||||| |||||| | |||||||| || ||||||||||||||||||| ||||||| || |||||||||||  |||      
T  45402077 gtaaccttggcgcaactggtaaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggttcaagtt 45402174  T
Q  395 ctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||    
T  45402175 ctgcgtacaatacaccaa 45402192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 412
Target Start/End: Original strand, 11596501 - 11596608
Alignment:
Q  303 cttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtac 402  Q
    ||||||||||| |||||||| | | |||||| |||| || ||||| |||||||||||| |||||||||||||| || ||||||||||||||||||||||     
T  11596501 cttggcgcaac-ggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgt-aaaaacagggtaaggctgcgtat 11596598  T
Q  403 aatacaccaa 412  Q
    ||||||||||    
T  11596599 aatacaccaa 11596608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 303 - 412
Target Start/End: Original strand, 33222971 - 33223079
Alignment:
Q  303 cttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtac 402  Q
    ||||||||||| |||||||||||| |||||| |||| |||||||| | || ||||| |||||||| ||||||| || |||||||||| |||| |||||||    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgt-aaaaacagggaaaggttgcgtac 33223069  T
Q  403 aatacaccaa 412  Q
    ||||||||||    
T  33223070 aatacaccaa 33223079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 412
Target Start/End: Complemental strand, 18742137 - 18742021
Alignment:
Q  298 gtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcct-ggaaacaacctcttgcgt-aaaaaacagggtaaggc 395  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||||||  ||||||| || | |||||||  || |||  | |||||||||||||||||    
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaaaacagggtaaggc 18742038  T
Q  396 tgcgtacaatacaccaa 412  Q
    |||||||||||||||||    
T  18742037 tgcgtacaatacaccaa 18742021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 412
Target Start/End: Original strand, 19414420 - 19414533
Alignment:
Q  297 ggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggct 396  Q
    ||||||||||||| || ||||||||||||| |||| | |||| |||||||| |||||||||||| |||| | ||||||  ||  |||||||| |||||||    
T  19414420 ggtaaccttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgt--aaaacaggttaaggct 19414517  T
Q  397 gcgtacaatacaccaa 412  Q
    ||||||||||||||||    
T  19414518 gcgtacaatacaccaa 19414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 6983980 - 6983873
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    ||||||||||| ||||||||||||| ||| || |||| |||||||| ||||||||||||||||||| ||||  |  ||||||||||||||||  ||||||    
T  6983980 ccttggcgcaa-tggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctc--gtataaaaaacagggtaagtatgcgta 6983884  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  6983883 caatacaccaa 6983873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 367
Target Start/End: Original strand, 34714599 - 34714674
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaaca 367  Q
    ||||||||||||||||||||||||||||||||||| |||||| | || |||||||| |||||||||| ||||||||    
T  34714599 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaaca 34714674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 413
Target Start/End: Complemental strand, 50760397 - 50760287
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||  |||||||| ||| |||||| ||||  ||||||| ||||||||||||| ||||| ||||||| ||| ||||| |||||||||||||||    
T  50760397 ccttggcgcaaa-ggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggtaaggctgcgta 50760299  T
Q  402 caatacaccaat 413  Q
     |||||||||||    
T  50760298 taatacaccaat 50760287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 303 - 412
Target Start/End: Original strand, 20036208 - 20036317
Alignment:
Q  303 cttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaa-aaacagggtaaggctgcgta 401  Q
    |||||||||| ||||||||||||| |||||| |||| |||||||| |||||||||||||||||||| |||||| ||||| | | ||||||||  |||||     
T  20036208 cttggcgcaa-tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaagggtaagattgcgtt 20036306  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  20036307 caatacaccaa 20036317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 27136823 - 27136714
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    ||||||| |||| |||||||||||| ||| || | ||||||| |||  |||||||| |||| |||||||||||| |||||||||| ||||||| ||||||    
T  27136823 ccttggcacaac-ggtaaagttgttgtcacgtgattggaaggacacgagttcaagttctgggaacaacctcttgtgtaaaaaacatggtaaggttgcgta 27136725  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  27136724 caatacaccaa 27136714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 412
Target Start/End: Original strand, 35005142 - 35005219
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| |||||||| |||||||||| || ||||| ||||||| |||||||||||||||||||||| |||||||||||||    
T  35005142 actgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaa 35005219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 413
Target Start/End: Original strand, 35019217 - 35019327
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||||| |||  | |||| |||||||| | ||||||||||| |||||||||||||  |||||| |||  ||||||||| ||    
T  35019217 ccttggcgcaac-ggtaaagttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaacaacctcttgtataaaaatcagtataaggctgcata 35019315  T
Q  402 caatacaccaat 413  Q
    ||||||||||||    
T  35019316 caatacaccaat 35019327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 412
Target Start/End: Original strand, 50811926 - 50812036
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaa-aacagggtaaggctgcgt 400  Q
    |||||||||||| |||||||||||| ||| || |||| |||||||| |  ||| |||||||||||| | ||||| |||||| |||||||||||| |||||    
T  50811926 ccttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggtaaggttgcgt 50812024  T
Q  401 acaatacaccaa 412  Q
    ||||||||||||    
T  50812025 acaatacaccaa 50812036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 15511322 - 15511211
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcg-- 399  Q
    ||||||||||| ||||||||||||| | ||||  ||| ||||||||   || |||||||||||||  ||||||| |||||||||||||||||||||||      
T  15511322 ccttggcgcaa-tggtaaagttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggtaaggctgcgga 15511224  T
Q  400 tacaatacaccaa 412  Q
    |||||||||||||    
T  15511223 tacaatacaccaa 15511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 40424721 - 40424786
Alignment:
Q  295 ggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcct 360  Q
    |||||||||||||||||||||||||||||||| |||||| |||| |||| ||| ||||||||||||    
T  40424721 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 31272513 - 31272446
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtaca 403  Q
    |||| |||||||| ||||||||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  31272513 actgaaaggtcacaggttcaagtcctggaaacaacctcttgtgt-aaaaacatggtaaggctgcgtaca 31272446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 39215083 - 39215027
Alignment:
Q  350 gttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaata 406  Q
    |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  39215083 gttcaagtactggaaacaacctcttgtgtaaaaaactgggtaaggctgcgtacaata 39215027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 45264534 - 45264462
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||  |||||||||||||||||||||||||| | ||||||||| ||||||||| || |||||||||||    
T  45264534 aaggtcacatgttcaagtcctggaaacaacctcttgtgcaaaaaacagagtaaggctgtgtgcaatacaccaa 45264462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 35253329 - 35253249
Alignment:
Q  330 atgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| |||| ||| |||| |||||||||||| |||||| ||||||| ||||||  ||||||||||||||||||||||||||||    
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 35253249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 384
Target Start/End: Complemental strand, 2436064 - 2435983
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaa 384  Q
    |||||| ||||| |||||||||||| ||| || |||| |||||||| |||||||||||||||||||||||| || ||||||||    
T  2436064 ccttggtgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaaa 2435983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 410
Target Start/End: Original strand, 52910204 - 52910312
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaaggctgcgt 400  Q
    |||||| ||||| |||||||||||| |||||| |||| |||||||| ||||||| || |||||||| ||||||  || ||||||||||||| | ||| ||    
T  52910204 ccttggtgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctcttaggtaaaaaaacagggtaggactgtgt 52910302  T
Q  401 acaatacacc 410  Q
    ||||||||||    
T  52910303 acaatacacc 52910312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 406
Target Start/End: Complemental strand, 18336026 - 18335914
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    |||||||| |||||||||| || ||||||||||  |||||  ||| ||||||||  |||||||| ||| ||| || || |||  |||| |||||||||||    
T  18336026 aggggtaatcttggcgcaagtgataaagttgttgccatgtgtctgaaaggtcacatgttcaagttctgaaaataatctattgtttaaagaacagggtaag 18335927  T
Q  394 gctgcgtacaata 406  Q
    |||||||||||||    
T  18335926 gctgcgtacaata 18335914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 408
Target Start/End: Complemental strand, 34679388 - 34679285
Alignment:
Q  304 ttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtaca 403  Q
    |||||||||| ||||||||| || |||||| |||| ||  ||||  |||| | |||| |||||||||||||| ||||||||||||||||| ||||||||     
T  34679388 ttggcgcaac-ggtaaagttattgtcatgtgactgaaatatcacatgttccattcctagaaacaacctcttgtgtaaaaaacagggtaagactgcgtact 34679290  T
Q  404 ataca 408  Q
    |||||    
T  34679289 ataca 34679285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 408
Target Start/End: Complemental strand, 18335465 - 18335354
Alignment:
Q  297 ggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggct 396  Q
    |||||||||||||||| || ||||||| || ||||||  ||| ||||||||  ||| ||||||||||||||  ||||||  ||||||  ||||||| | |    
T  18335465 ggtaaccttggcgcaagtgataaagtttttgtcatgtgtctgaaaggtcacaagttaaagtcctggaaacagtctcttgtttaaaaattagggtaaagtt 18335366  T
Q  397 gcgtacaataca 408  Q
    ||||||||||||    
T  18335365 gcgtacaataca 18335354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 22324926 - 22324988
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||| |||||||| ||||||| |||||| ||||||||||||||| |||||||||||||    
T  22324926 ggttcaagtcttggaaacagcctcttgtgtaaaa-acagggtaaggctgcatacaatacaccaa 22324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 412
Target Start/End: Original strand, 19701557 - 19701666
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| | |||||||||| || ||| |||| || ||||| |||| ||||| || ||||| ||||||| |||||||||  ||||||| || |||    
T  19701557 ccttggcgcaacag-taaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaacttggtaaggatgggta 19701655  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  19701656 caatacaccaa 19701666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 380
Target Start/End: Original strand, 21723642 - 21723727
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaa 380  Q
    |||||||||||| || ||||||||||||||||| |||||| |||||| ||| ||  |||| ||||||||||||| ||||||| ||||    
T  21723642 aggggtaaccttcgcacaactggtaaagttgttgtcatgtgactggatggttacaagttc-agtcctggaaacagcctcttgtgtaa 21723727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 377 - 412
Target Start/End: Original strand, 4349699 - 4349734
Alignment:
Q  377 gtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||||||||||||||||    
T  4349699 gtaaaaaacagggtaaggctgcgtacaatacaccaa 4349734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 404
Target Start/End: Complemental strand, 14988084 - 14987989
Alignment:
Q  309 gcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaa 404  Q
    |||||||||||||||||| |||| | ||| ||| |||||  |||||||||||| |||||   ||||  |||||| ||||| |||||||||||||||    
T  14988084 gcaactggtaaagttgttgtcatatgactagaaagtcacaagttcaagtcctgaaaacagtatcttatgtaaaatacaggataaggctgcgtacaa 14987989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 31382330 - 31382276
Alignment:
Q  357 tcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| ||||||| ||||||| |||| |||||||||||||||||||||||    
T  31382330 tcctggaaacagcctcttgtgtaaaaa-caggataaggctgcgtacaatacaccaa 31382276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 412
Target Start/End: Original strand, 23371111 - 23371219
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| | |||||||||| ||   | |||| |||||||| |||||||||||| |||||| || |||| ||||||||| ||| |||| || |||    
T  23371111 ccttggcgcaacag-taaagttgttttcgcatgactgaaaggtcacgggttcaagtcctagaaacagccacttgggtaaaaaac-gggcaaggttgtgta 23371208  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  23371209 caatacaccaa 23371219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 4251507 - 4251455
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||| ||  |||||||||||||||||| ||||||    
T  4251507 ggttcaagtcctagaaacaaccttttatgtaaaaaacagggtaaggatgcgta 4251455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 43207523 - 43207591
Alignment:
Q  344 tcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| |||| ||||| |||||||||||||||  || |||||||||||||| | || |||||||||||||    
T  43207523 tcacaggtttaagtcttggaaacaacctcttatgtgaaaaacagggtaagacggcatacaatacaccaa 43207591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 412
Target Start/End: Complemental strand, 10378828 - 10378797
Alignment:
Q  381 aaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||||||||||||    
T  10378828 aaaacagggtaaggctgcgtacaatacaccaa 10378797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 412
Target Start/End: Original strand, 23796507 - 23796561
Alignment:
Q  358 cctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||| ||||||| ||||||| ||  |||||| |||||||||||||||||    
T  23796507 cctggaaacagcctcttgtgtaaaaatcaatgtaaggttgcgtacaatacaccaa 23796561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 375
Target Start/End: Complemental strand, 25554893 - 25554821
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttg 375  Q
    ||||||||||| ||||||||||||| ||| || |||  |||| |||  ||| ||||||||||||||||||||||    
T  25554893 ccttggcgcaa-tggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaacctcttg 25554821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 412
Target Start/End: Complemental strand, 31442485 - 31442452
Alignment:
Q  379 aaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||||||| |||||||||||||||||    
T  31442485 aaaaaacagggtaaggatgcgtacaatacaccaa 31442452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 412
Target Start/End: Original strand, 46859129 - 46859162
Alignment:
Q  379 aaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||| ||||||||||||||||||    
T  46859129 aaaaaacagggtaagactgcgtacaatacaccaa 46859162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 320
Target Start/End: Original strand, 4349675 - 4349703
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaa 320  Q
    |||||||||||||||||||||||||||||    
T  4349675 tgaggggtaaccttggcgcaactggtaaa 4349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 333
Target Start/End: Original strand, 10163736 - 10163776
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgt 333  Q
    |||||||||| |||||||||||| |||||||||| ||||||    
T  10163736 gaggggtaacattggcgcaactgataaagttgttgtcatgt 10163776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 365
Target Start/End: Complemental strand, 10378909 - 10378834
Alignment:
Q  289 atgtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaa 365  Q
    |||| ||||| | |||||| ||||| |||||||||||| ||| || |||| ||||| || |||||||||||||||||    
T  10378909 atgtaaggggaagccttggtgcaac-ggtaaagttgttgtcacgtgactgaaaggttacgggttcaagtcctggaaa 10378834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 412
Target Start/End: Complemental strand, 19656220 - 19656168
Alignment:
Q  360 tggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||| ||||||| |||||||||| ||||| |||  ||||||||||||||    
T  19656220 tggaaacagcctcttgtgtaaaaaacatggtaacgctatgtacaatacaccaa 19656168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 419
Target Start/End: Complemental strand, 19974213 - 19974130
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaatatgatg 419  Q
    |||| ||| |||| |||||||||| |||||||| ||||  | |||||||  |||| |||| ||||||||||||||||| ||||||    
T  19974213 actgaaagatcacgggttcaagtcttggaaacagcctcaagtgtaaaaat-agggcaaggttgcgtacaatacaccaaaatgatg 19974130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 412
Target Start/End: Complemental strand, 20999952 - 20999912
Alignment:
Q  372 cttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  20999952 cttgtgtaaaaaacaaggcaaggctgcgtacaatacaccaa 20999912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 289 - 412
Target Start/End: Original strand, 5648209 - 5648331
Alignment:
Q  289 atgtgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagg 388  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| || |||||||||    
T  5648209 atgtgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagg 5648307  T
Q  389 gtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||||    
T  5648308 gtaaggctgcgtacaatacaccaa 5648331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 300 - 414
Target Start/End: Complemental strand, 16408777 - 16408663
Alignment:
Q  300 aaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcg 399  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcg 16408678  T
Q  400 tacaatacaccaata 414  Q
    |||||||||||||||    
T  16408677 tacaatacaccaata 16408663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 21646918 - 21647039
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||| |||||||| |||||||    
T  21646918 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaa 21647017  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    |||||||||||||| |||||||    
T  21647018 ggctgcgtacaatataccaata 21647039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 20224937 - 20225055
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||  ||||||||||||||||||||||||||| ||  |||||||||||    
T  20224937 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgt--aaaacagggta 20225034  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  20225035 aggctgcgtacaatacaccaa 20225055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 48599005 - 48598887
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  |||||||||||    
T  48599005 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggta 48598908  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  48598907 aggctgcgtacaatacaccaa 48598887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 6430807 - 6430688
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||||| |||||||| ||||||| || ||||||||||||    
T  6430807 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgt-aaaaacagggta 6430709  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  6430708 aggctgcgtacaatacaccaa 6430688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 292 - 412
Target Start/End: Original strand, 30639333 - 30639452
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| || ||| |||| |||||||| |||||||||||||||||||  |||||| || ||||||||||||    
T  30639333 tgaggggtaaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgt-aaaaacagggta 30639431  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  30639432 aggctgcgtacaatacaccaa 30639452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 47528709 - 47528592
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||||| |||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  ||||||||||||    
T  47528709 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaa 47528612  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  47528611 ggctgcgtacaatacaccaa 47528592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 296 - 414
Target Start/End: Original strand, 16911519 - 16911637
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    ||||||||||||||||||||||||||||||| |||||| |||  |||||||| |||||||||||| |||||| ||||||| ||| ||| |||||||||||    
T  16911519 gggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggc 16911618  T
Q  396 tgcgtacaatacaccaata 414  Q
    |||||||||||||||||||    
T  16911619 tgcgtacaatacaccaata 16911637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 10660358 - 10660479
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| ||||| ||  |||||||||||||||||||||||||  |||||||| ||||||     
T  10660358 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtat 10660457  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    |||||| |||||||||||||||    
T  10660458 ggctgcatacaatacaccaata 10660479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 10874503 - 10874624
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| ||||| ||  |||||||||||||||||||||||||  |||||||| ||||||     
T  10874503 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtat 10874602  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    |||||| |||||||||||||||    
T  10874603 ggctgcatacaatacaccaata 10874624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 5306845 - 5306726
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||| | |||||| |||| |||||||| ||||||||||||||||||| ||||||| || |||| |||||||    
T  5306845 tgaggggtaaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaatcagggta 5306747  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    ||| |||||||||||||||||    
T  5306746 aggttgcgtacaatacaccaa 5306726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 293 - 414
Target Start/End: Complemental strand, 13256578 - 13256461
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||||||||||  |||||||||||||||     ||||||| ||||||||||||||||    
T  13256578 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtcctggag----cctcttgtgtaaaaaacagggtaa 13256483  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||||    
T  13256482 ggctgcgtacaatacaccaata 13256461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 37494805 - 37494924
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||||| ||||||||||||||||||  ||||  |||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  37494805 gaggggtaaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaa 37494904  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    || ||| ||||||| |||||    
T  37494905 ggttgcatacaatataccaa 37494924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 23501747 - 23501862
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||      ||| ||||||| ||||||||||||||||    
T  23501747 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaaaacagggtaa 23501840  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    || |||||||||||||||||||    
T  23501841 ggttgcgtacaatacaccaata 23501862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 11054327 - 11054210
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||| |||||  |||||| ||  ||||||||||||    
T  11054327 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgt--aaaacagggtaa 11054230  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    | ||||||||||||||||||    
T  11054229 gactgcgtacaatacaccaa 11054210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 314 - 413
Target Start/End: Original strand, 19027823 - 19027922
Alignment:
Q  314 tggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaat 413  Q
    ||||| ||||||| ||| || |||| |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  19027823 tggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaat 19027922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 408
Target Start/End: Original strand, 14590790 - 14590907
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttg-cgtaaaaaacagggt 390  Q
    |||| |||||||||||||||||||||||||||||| |||||| |||| |||||||| | |||||||||| |||||| ||||||| |  ||||||||||||    
T  14590790 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggt 14590889  T
Q  391 aaggctgcgtacaataca 408  Q
    |||||||| |||||||||    
T  14590890 aaggctgcatacaataca 14590907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 47443958 - 47444030
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47443958 aaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 47444030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 319 - 412
Target Start/End: Complemental strand, 17043549 - 17043456
Alignment:
Q  319 aagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||| ||| || |||| |||||||| ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaa 17043456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 312 - 412
Target Start/End: Original strand, 40915802 - 40915901
Alignment:
Q  312 actggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacacca 411  Q
    ||||||||||||||| |||||| |||  |||||||| ||||||||||||||||||| ||||||| || ||||||| ||||||||||||||||||||||||    
T  40915802 actggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacaaggtaaggctgcgtacaatacacca 40915900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 302 - 409
Target Start/End: Complemental strand, 487306 - 487200
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||| ||| |||||||||||| |||||| |||| |||||||| |||||||||| |||||||||||||||| ||| |||||| ||||| ||||||||    
T  487306 ccttggcgtaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaagctgcgta 487208  T
Q  402 caatacac 409  Q
    ||||||||    
T  487207 caatacac 487200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 296 - 398
Target Start/End: Complemental strand, 17315476 - 17315375
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    |||||||||||||||||| |||||||||||| |||||| |||| |||||||| ||||||| |||| |||||||||||||| || ||||||| ||||||||    
T  17315476 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgt-aaaaacaaggtaaggc 17315378  T
Q  396 tgc 398  Q
    |||    
T  17315377 tgc 17315375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 294 - 412
Target Start/End: Original strand, 54966977 - 54967093
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    ||||| |||||||||||||| |||||||||||| |||||| |||| ||||||||  |||||||| ||||||| ||||||||| |||||||||||||||||    
T  54966977 agggggaaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaag 54967075  T
Q  394 gctgcgtacaatacaccaa 412  Q
    | ||| ||||||| |||||    
T  54967076 gttgc-tacaatataccaa 54967093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 412
Target Start/End: Original strand, 25343152 - 25343260
Alignment:
Q  303 cttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtac 402  Q
    |||||||||| ||||||||||||| ||| || ||||  ||||||| ||||||||| ||||||| |  |||||| ||||||||||||||||||||||||||    
T  25343152 cttggcgcaa-tggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggctgcgtac 25343250  T
Q  403 aatacaccaa 412  Q
    ||||||||||    
T  25343251 aatacaccaa 25343260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 315 - 412
Target Start/End: Original strand, 35567146 - 35567243
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||| ||||||||||| |||||||  |||||||||| |||||||| || |||| ||||||||||||||||||||| |||||| |||||||    
T  35567146 ggtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggctgtgtacaacacaccaa 35567243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 296 - 409
Target Start/End: Original strand, 14983791 - 14983904
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    |||||||||||||  |||||||||||||||| |||| | | ||||||||||| | |||||||| | |||||| ||||||| |||||||| |||||||||     
T  14983791 gggtaaccttggcagaactggtaaagttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaaatagggtaaggt 14983890  T
Q  396 tgcgtacaatacac 409  Q
    ||| ||||||||||    
T  14983891 tgcctacaatacac 14983904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 25463111 - 25463195
Alignment:
Q  328 tcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||| ||||||||| |||||||    
T  25463111 tcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaactgggaaaggttgcgtacaacacaccaa 25463195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 312 - 404
Target Start/End: Complemental strand, 44363294 - 44363202
Alignment:
Q  312 actggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaa 404  Q
    ||||||||||||||| |||||| |||| ||||||||  |||||||||||| ||||| |||| || ||||||||||||||| ||||||||||||    
T  44363294 actggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaa 44363202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 399
Target Start/End: Complemental strand, 42164317 - 42164224
Alignment:
Q  304 ttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcg 399  Q
    |||||||||| |||||| ||||| |||||| |||| |||||||| |||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  42164317 ttggcgcaac-ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgt-aaaaacagggtaaggctgcg 42164224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 296 - 414
Target Start/End: Original strand, 54730206 - 54730325
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaagg 394  Q
    ||||||| |||||||||  |||||||||||| |||||| ||   |||||||| |||||||||||| |||||| ||||||| || |||||| ||| |||||    
T  54730206 gggtaactttggcgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaataggataagg 54730305  T
Q  395 ctgcgtacaatacaccaata 414  Q
    ||||||| ||||||||||||    
T  54730306 ctgcgtataatacaccaata 54730325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 412
Target Start/End: Complemental strand, 8473790 - 8473684
Alignment:
Q  304 ttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtaca 403  Q
    ||||||||||||||||||||||| |||| | || |||||||  | ||||||||||||||||||| ||||||| ||    |||||||||||||||| ||||    
T  8473790 ttggcgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctcttgtgt--ttaacagggtaaggctgcataca 8473693  T
Q  404 atacaccaa 412  Q
    |||||||||    
T  8473692 atacaccaa 8473684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 409
Target Start/End: Complemental strand, 55766647 - 55766531
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcac-cggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||| ||||||||||||||||||| |||||| || ||||||||||  |||||||||  ||||||||   ||||| ||   ||||||||||    
T  55766647 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaacagtttcttgtgt-gtaaacagggta 55766549  T
Q  392 aggctgcgtacaatacac 409  Q
    ||||||||||||||||||    
T  55766548 aggctgcgtacaatacac 55766531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 20405047 - 20405162
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggta 391  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||       ||| |||||| ||||||| || |||||||||||||    
T  20405047 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcacggg-------cctagaaacagcctcttgtgtaaaaaaacagggta 20405139  T
Q  392 aggctgcgtacaatacaccaata 414  Q
    ||  |||||||||||||| ||||    
T  20405140 agattgcgtacaatacactaata 20405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 20639777 - 20639721
Alignment:
Q  356 gtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaa 20639721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 412
Target Start/End: Complemental strand, 47441699 - 47441592
Alignment:
Q  304 ttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtaca 403  Q
    |||||||||| |||||||||||| ||| || |||| |||||||| |||||||||||  ||||||  |||||  ||||||| ||||||||||||| |||||    
T  47441699 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggtaaggctgtgtaca 47441601  T
Q  404 atacaccaa 412  Q
    |||||||||    
T  47441600 atacaccaa 47441592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 398
Target Start/End: Original strand, 43035224 - 43035307
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgc 398  Q
    |||||||||||| ||| || |||| |||||||| ||||||||||| ||||||||||||||| |||| ||||| |||||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaaggctgc 43035307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 9832450 - 9832375
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| |||||||| ||||||||||||| ||||| ||||||| ||||||  ||||||||||||||||||||||||||||    
T  9832450 actgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 9832375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 384
Target Start/End: Complemental strand, 30352767 - 30352681
Alignment:
Q  298 gtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaa 384  Q
    ||||||||||||||||||||||||||||| ||| || || | |||||||| ||||  ||||||||||||| ||||||| ||||||||    
T  30352767 gtaaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaa 30352681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 409
Target Start/End: Complemental strand, 39029220 - 39029126
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacac 409  Q
    |||||||||||| || ||| |||  |||||||  |||||||| | |||||||| ||||||| ||||||||||||||||||||| |||||||||||    
T  39029220 ggtaaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacac 39029126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 412
Target Start/End: Complemental strand, 41018945 - 41018856
Alignment:
Q  322 ttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||| ||| || |||| |||||||| ||||||||||||||||||||||||||| || ||||  ||||||||||| |||||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgt-aaaattagggtaaggctacgtacaatacaccaa 41018856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 411
Target Start/End: Original strand, 51420537 - 51420646
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccgg-ttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgt 400  Q
    |||||||||||| ||| |||||||| ||| || |||| |||||||   | |||||||| |||||||||||||||| ||| ||||||||||||||||| ||    
T  51420537 ccttggcgcaac-ggtgaagttgttgtcacgtgactgaaaggtcagttgattcaagtcatggaaacaacctcttgtgtagaaaacagggtaaggctgggt 51420635  T
Q  401 acaatacacca 411  Q
    |||||||||||    
T  51420636 acaatacacca 51420646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 412
Target Start/End: Original strand, 54175043 - 54175136
Alignment:
Q  319 aagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaa-caacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||| |||||| |||| || ||||| | ||||||||||||||| || ||||||| |||||| |||||||||||||||||||||||||||||    
T  54175043 aagttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaa-acagggtaaggctgcgtacaatacaccaa 54175136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 351 - 412
Target Start/End: Complemental strand, 9987957 - 9987896
Alignment:
Q  351 ttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||| |||||||||||||    
T  9987957 ttcaagtcctggaaacaacctcttgtgtaaacaatagggtaaggctgcatacaatacaccaa 9987896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 351 - 412
Target Start/End: Original strand, 21489099 - 21489160
Alignment:
Q  351 ttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||    
T  21489099 ttcaagtcctggaaacagcctcttgcgtaaaaaacagagtaagactgcgtacaatgcaccaa 21489160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 412
Target Start/End: Complemental strand, 39077948 - 39077858
Alignment:
Q  320 agttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||| |||||| | || |||||||| ||||||||||||||||||| ||||||| ||  |||||||||||||| ||||||||||| |||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaaggttgcgtacaatataccaa 39077858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 409
Target Start/End: Complemental strand, 55830902 - 55830786
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccg-gttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||| ||||||||||||||||||| |||||| |  |||||||||| | ||||||||  ||||||||  |||||| ||   ||||||||||    
T  55830902 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgatcggaaggtcacggagttcaagttttggaaacagtctcttgtgt-gtaaacagggta 55830804  T
Q  392 aggctgcgtacaatacac 409  Q
    | ||||||||||||||||    
T  55830803 atgctgcgtacaatacac 55830786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 30581638 - 30581528
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaaggctgcgt 400  Q
    |||||||||||| | |||||||||| |||  | |||  |||||||  |||||||||| |||||||||||||||| || |||||||||||||||| || ||    
T  30581638 ccttggcgcaac-gctaaagttgttgtcacatcactaaaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggtaagggtgtgt 30581540  T
Q  401 acaatacaccaa 412  Q
    ||||||||||||    
T  30581539 acaatacaccaa 30581528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 322 - 412
Target Start/End: Complemental strand, 7385628 - 7385538
Alignment:
Q  322 ttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||| |||||| |||| |||||||| |||||||| |||||||||| |||| || |||||||| ||||||||| || || |||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacaccaa 7385538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 29208035 - 29207960
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| |||||||| |||||||||||||||||   ||||||| ||||||  ||||||||||||||||||||||||||||    
T  29208035 actgaaaggtcacgggttcaagtcctggaaattgcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 29207960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 412
Target Start/End: Complemental strand, 30496491 - 30496384
Alignment:
Q  303 cttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtac 402  Q
    |||||||||||||  ||||||||| ||| || |||| ||||||||  ||||||||| |||||||| ||||||| ||||| |   |||||||||||| |||    
T  30496491 cttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaaca--cgggtaaggctgcatac 30496394  T
Q  403 aatacaccaa 412  Q
    ||||||||||    
T  30496393 aatacaccaa 30496384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 412
Target Start/End: Original strand, 7038042 - 7038125
Alignment:
Q  328 tcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||| |||| |||||||| ||||||||||||| ||||| | ||||| |||||||| |||||||| || |||||||||||||||    
T  7038042 tcatgtgactgaaaggtcacaggttcaagtcctg-aaacagcttcttgtgtaaaaaatagggtaagacttcgtacaatacaccaa 7038125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 32478942 - 32478863
Alignment:
Q  317 taaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctg 397  Q
    |||||||||| |||||| || |  ||||||| ||||||||||||||||||||||||| | || ||||||||||||||||||    
T  32478942 taaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgt-aaaaacagggtaaggctg 32478863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 367
Target Start/End: Complemental strand, 5313172 - 5313101
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaaca 367  Q
    |||||||||||||| |||||||||||||||| |||||| | || |||||||| ||||||| ||||| |||||    
T  5313172 gggtaaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaattcctgaaaaca 5313101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 23580365 - 23580270
Alignment:
Q  317 taaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||| ||| || |||| |||||||| ||||||||| || |||| | ||||||| ||||||||||||| ||| |||||||  |||||||||    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacaggggaagactgcgtaggatacaccaa 23580270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 383
Target Start/End: Complemental strand, 49938759 - 49938681
Alignment:
Q  305 tggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaa 383  Q
    ||||||||| |  ||||||||| ||| || |||| |||||||| ||||||||||||||||||| ||||||| |||||||    
T  49938759 tggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa 49938681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 413
Target Start/End: Complemental strand, 30690340 - 30690237
Alignment:
Q  317 taaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaa-------cagggtaaggctgcgtacaatacac 409  Q
    |||||| ||| ||| || |||| |||||||| ||||||||||||||||| | ||||||| ||||||||       |||||||||||||| ||||||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaataaaaaacagggtaaggctgcatacaatacac 30690241  T
Q  410 caat 413  Q
    ||||    
T  30690240 caat 30690237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 412
Target Start/End: Complemental strand, 51865149 - 51865100
Alignment:
Q  363 aaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  51865149 aaacagcctcttgtgtaaaaaacatggtaaggctgcgtacaatacaccaa 51865100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 407
Target Start/End: Complemental strand, 17079776 - 17079718
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatac 407  Q
    |||||||||| |||||||||  ||||| ||| |||||||||||||||||| ||||||||    
T  17079776 ggttcaagtcttggaaacaatatcttgtgtataaaacagggtaaggctgcatacaatac 17079718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 412
Target Start/End: Original strand, 44357195 - 44357293
Alignment:
Q  314 tggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||| || | ||||||||| |||||||   ||||||||||| |||||||||| ||| |||| ||| || ||||| |  |||||||||||||||    
T  44357195 tggtaaagttattgttatgtaactgaaaggtcatgagttcaagtcctagaaacaaccttttgtgtaataaatagagtaagacgacgtacaatacaccaa 44357293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 18969698 - 18969735
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgt 333  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  18969698 gggtaaccttggcgcaactggtaaagttgttgtcatgt 18969735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 359 - 412
Target Start/End: Original strand, 25629069 - 25629122
Alignment:
Q  359 ctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||  |||||| |||||||| |||||||||||| ||||||||||||||    
T  25629069 ctggaaacagtctcttgtgtaaaaaatagggtaaggctgtgtacaatacaccaa 25629122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 29879679 - 29879622
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccg 349  Q
    ||||||||||| |||| ||||||| |||||||||| |||||| ||| |||||||||||    
T  29879679 tgaggggtaacattggtgcaactgataaagttgttgtcatgtgactagaaggtcaccg 29879622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 20908818 - 20908699
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaag-gtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||| | ||||||| |||| |||||||||||| |||||| |||| ||  || ||  ||||||||| |||||||| | ||||   ||||||| | ||||    
T  20908818 gagggggagccttggcacaac-ggtaaagttgttgtcatgtgactgaaaatgttacatgttcaagtcatggaaacatcgtcttttctaaaaaagaaggta 20908720  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    |||||||||||||||||||||    
T  20908719 aggctgcgtacaatacaccaa 20908699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 32629436 - 32629332
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||||   ||||| |||| |||||||| ||||||| |||| |||||| |||||||   ||||||||||||||||| || ||    
T  32629436 ccttggcgcaac-ggtaaagttgt---catgtgactgaaaggtcacgggttcaaatcctcgaaacagcctcttgta-aaaaaacagggtaaggccgccta 32629342  T
Q  402 caatacaccaa 412  Q
    | |||||||||    
T  32629341 c-atacaccaa 32629332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 397
Target Start/End: Original strand, 36589753 - 36589801
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctg 397  Q
    ||||||||||||||||||| ||||||| |||||||||| ||||| ||||    
T  36589753 ggttcaagtcctggaaacagcctcttgtgtaaaaaacatggtaatgctg 36589801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 370 - 414
Target Start/End: Complemental strand, 48327869 - 48327825
Alignment:
Q  370 ctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaata 414  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||    
T  48327869 ctcttgtgtaaaaaacagggtaagactgcatacaatacaccaata 48327825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 7909397 - 7909343
Alignment:
Q  357 tcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||  |||||| ||||||| |||||||||| |||||||||||||||||    
T  7909397 tcctggaaacagtctcttgtgtaaaaa-cagggtaaggttgcgtacaatacaccaa 7909343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 405
Target Start/End: Complemental strand, 49938610 - 49938508
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |  ||||||||| ||| || |||| |||||||| | |||||||| ||||| || | | ||| || |||||||||||||||||||||     
T  49938610 ccttggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacagattcaagtcttggaagcagcgtattgtgt-aaaaacagggtaaggctgcgtc 49938512  T
Q  402 caat 405  Q
    ||||    
T  49938511 caat 49938508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 412
Target Start/End: Complemental strand, 3580994 - 3580902
Alignment:
Q  316 gtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| |||||| |||| || |||||  ||||||||| |||||||   |||||| ||||||| || |||||||||| || |||||||||||    
T  3580994 gtaaagttgttgtcatgtgactgaaaagtcacgagttcaagtc-tggaaac---ctcttgtgtaaaaaccatggtaaggctgtgtgcaatacaccaa 3580902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 412
Target Start/End: Complemental strand, 10277886 - 10277819
Alignment:
Q  343 gtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||| ||||||| |||| |||||| |||||||  || |||| ||| |||||||||||||||||||||||    
T  10277886 gtcacgggttcaaatccttgaaacagcctcttg--tataaaataggataaggctgcgtacaatacaccaa 10277819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 414
Target Start/End: Original strand, 20225119 - 20225149
Alignment:
Q  384 acagggtaaggctgcgtacaatacaccaata 414  Q
    |||||||||||||||||||||||||||||||    
T  20225119 acagggtaaggctgcgtacaatacaccaata 20225149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 20373974 - 20373901
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaaca 367  Q
    ||||||||| |||||||||||||| |||||||| |||| | |||| || |||||  |||||| |||| ||||||    
T  20373974 aggggtaactttggcgcaactggtcaagttgttctcatatgactgaaatgtcacatgttcaattccttgaaaca 20373901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 412
Target Start/End: Original strand, 49796818 - 49796870
Alignment:
Q  359 ctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||| ||||||| || |||| || |||||||||||||||||||||||||    
T  49796818 ctggaaacagcctcttgtgttaaaa-catggtaaggctgcgtacaatacaccaa 49796870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 30533 - 30650
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||| ||||||| ||  |||||||||||     
T  30533 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgt--aaaacagggtag 30630  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  30631 ggctgcgtacaatacaccaa 30650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 1354936 - 1354819
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  ||||||||||||    
T  1354936 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgt--aaaacagggtaa 1354839  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  1354838 ggctgcgtacaatacaccaa 1354819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 303 - 414
Target Start/End: Complemental strand, 12222088 - 12221977
Alignment:
Q  303 cttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtac 402  Q
    |||||||||||||||||||||||| |||||| |||| |||||||| |||||||||| |||||||| ||||||| ||||||||||||||||||||||||||    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 12221989  T
Q  403 aatacaccaata 414  Q
    ||||||||||||    
T  12221988 aatacaccaata 12221977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 293 - 412
Target Start/End: Original strand, 1346918 - 1347035
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| || |||| ||  ||||||||||||    
T  1346918 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgt--aaaacagggtaa 1347015  T
Q  393 ggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||    
T  1347016 ggctgcgtacaatacaccaa 1347035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 292 - 407
Target Start/End: Original strand, 8409196 - 8409311
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||| |||||||| | ||||||||||||||||  ||||||| |||||||||||||||    
T  8409196 tgaggggtaaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggta 8409295  T
Q  392 aggctgcgtacaatac 407  Q
    ||||||||||||||||    
T  8409296 aggctgcgtacaatac 8409311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 292 - 414
Target Start/End: Complemental strand, 29356040 - 29355917
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaag-ttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggt 390  Q
    ||||||||||||||||| |||||||||||  ||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| |||| |||||||||    
T  29356040 tgaggggtaaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggt 29355941  T
Q  391 aaggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||||||||||    
T  29355940 aaggctgcgtacaatacaccaata 29355917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 293 - 410
Target Start/End: Original strand, 1941809 - 1941926
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    ||||||||||||||| |||||||||||||||||| |||| | ||||||||||| | | || ||||| || ||||||||||||| ||||||||||||||||    
T  1941809 gaggggtaaccttggtgcaactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaa 1941908  T
Q  393 ggctgcgtacaatacacc 410  Q
    ||||||||||||||||||    
T  1941909 ggctgcgtacaatacacc 1941926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 292 - 414
Target Start/End: Original strand, 9161076 - 9161197
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||| |||||  |||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| || |||||||| |||    
T  9161076 tgaggggtaaccttgacgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt-aaaaacagagta 9161174  T
Q  392 aggctgcgtacaatacaccaata 414  Q
    ||||||||||||||||| |||||    
T  9161175 aggctgcgtacaatacatcaata 9161197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 298 - 414
Target Start/End: Complemental strand, 2166587 - 2166472
Alignment:
Q  298 gtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctg 397  Q
    ||||||||| ||||||| ||||||||||| | |||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||| ||||| ||    
T  2166587 gtaaccttg-cgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttg 2166489  T
Q  398 cgtacaatacaccaata 414  Q
    |||||||||||||||||    
T  2166488 cgtacaatacaccaata 2166472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 298 - 414
Target Start/End: Complemental strand, 2178220 - 2178105
Alignment:
Q  298 gtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctg 397  Q
    ||||||||| ||||||| ||||||||||| | |||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||| ||||| ||    
T  2178220 gtaaccttg-cgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttg 2178122  T
Q  398 cgtacaatacaccaata 414  Q
    |||||||||||||||||    
T  2178121 cgtacaatacaccaata 2178105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 412
Target Start/End: Complemental strand, 13905158 - 13905041
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaag 393  Q
    ||||| |||||||||||||| |||||||||||| |||||| |||| |||||||| || |||||||||| |||| |||||||| |||||||||||||||||    
T  13905158 agggggaaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaag 13905060  T
Q  394 gctgcgtacaatacaccaa 412  Q
    ||||| |||||| ||||||    
T  13905059 gctgcatacaattcaccaa 13905041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 295 - 412
Target Start/End: Complemental strand, 3815256 - 3815139
Alignment:
Q  295 ggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaagg 394  Q
    |||||||||||||||||||||||||||||||| |||||| |||| || ||||| |||||||||||||||||||  || ||| |||||||| | |||| |     
T  3815256 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggtacga 3815157  T
Q  395 ctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||    
T  3815156 ctgcgtacaatacaccaa 3815139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 6024187 - 6024308
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||  ||| ||||||||||||||||||| |||||| | ||||||||||| | ||||| |||| |||||| ||||||| |||||||||| |||||    
T  6024187 gaggggtaattttgacgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggtaa 6024286  T
Q  393 ggctgcgtacaatacaccaata 414  Q
    | ||||||||||||||||||||    
T  6024287 gactgcgtacaatacaccaata 6024308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 297 - 409
Target Start/End: Original strand, 20400625 - 20400737
Alignment:
Q  297 ggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggct 396  Q
    |||||||||||||||| ||||| ||||||| |||||| |||| |||||||| |||||||||  ||||||||| |||||| ||||||||||||||||| ||    
T  20400625 ggtaaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagact 20400724  T
Q  397 gcgtacaatacac 409  Q
    ||||||| |||||    
T  20400725 gcgtacagtacac 20400737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 14975262 - 14975168
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaaca 386  Q
    |||||| ||||||||||||||| |||||||||||| |||||| ||||||||||||| | ||||||||||||||||| ||||||| ||||||||||    
T  14975262 tgagggataaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaaaca 14975168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 7947543 - 7947434
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||| | |   || |||| |||||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||    
T  7947543 ccttggcgcaac-ggtaaagttggtgttgcgtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaaggctgcgta 7947445  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  7947444 caatacaccaa 7947434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 401
Target Start/End: Complemental strand, 15866218 - 15866110
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaa 392  Q
    |||||||||||||||| |||||||||||||||||  ||||| | || |||||||  ||||||| ||||||||||| ||||||  ||||||||||||||||    
T  15866218 gaggggtaaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaaacagggtaa 15866119  T
Q  393 ggctgcgta 401  Q
     ||||||||    
T  15866118 agctgcgta 15866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 412
Target Start/End: Original strand, 14553477 - 14553584
Alignment:
Q  304 ttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtaca 403  Q
    |||| |||||||||||||||||| |||||| |||  |||||||| ||||||||||||||||| | | ||||| |||||||| |||||||||||| ||| |    
T  14553477 ttggtgcaactggtaaagttgttgtcatgtgacta-aaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggctgtgtata 14553575  T
Q  404 atacaccaa 412  Q
    |||||||||    
T  14553576 atacaccaa 14553584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 412
Target Start/End: Complemental strand, 32728334 - 32728218
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    |||||||||||| | |||  ||||||||||| |||||| |||| |||||||| | |||||||  |||||||||||||||  ||||||||||||||||| |    
T  32728334 gggtaaccttggtggaacgagtaaagttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaagac 32728235  T
Q  396 tgcgtacaatacaccaa 412  Q
    || |||||||| |||||    
T  32728234 tgtgtacaatataccaa 32728218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 33138838 - 33138906
Alignment:
Q  344 tcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||| |||||||||||||||||||||||||||  |||||||||| ||||||| ||||||||||||||||    
T  33138838 tcacgggttcaagtcctggaaacaacctcttgtataaaaaacagagtaaggccgcgtacaatacaccaa 33138906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 384
Target Start/End: Original strand, 24734591 - 24734678
Alignment:
Q  297 ggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaa 384  Q
    |||||| ||||||||||||||||||||||| |||||| |||| |||||||   |||||| |||| |||||||||||||| ||||||||    
T  24734591 ggtaacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctcttgtgtaaaaaa 24734678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 379
Target Start/End: Complemental strand, 33923009 - 33922923
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgta 379  Q
    ||||||||||||||||||||| |||||||||||| |||| | |||| || ||||| |||||||||||| |||||  |||||||||||    
T  33923009 gaggggtaaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttcaagtcctagaaacgtcctcttgcgta 33922923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 384
Target Start/End: Original strand, 12063424 - 12063512
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaa 384  Q
    |||||||||||| ||||||| ||||||||||||||||  |||| |||||||| |||||||||||| |||| | |||||||  |||||||    
T  12063424 gggtaaccttggtgcaactgataaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgtataaaaaa 12063512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 410
Target Start/End: Original strand, 12889390 - 12889497
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    ||||||| |||| |||||||||||| ||| || | || |||||||| |||||||||| || ||||| ||||||| || |||||||||| |||||||| ||    
T  12889390 ccttggcacaac-ggtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaaacagggcaaggctgcata 12889488  T
Q  402 caatacacc 410  Q
    |||||||||    
T  12889489 caatacacc 12889497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 404
Target Start/End: Original strand, 22967124 - 22967235
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||| ||||| ||| ||||||| || |||||| |||| ||||||||  ||||||||| |||||||||| ||||| || ||||| ||| ||    
T  22967124 tgaggggtaaccttcgcgcatctgataaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgt-aaaaataggata 22967222  T
Q  392 aggctgcgtacaa 404  Q
    ||||||| |||||    
T  22967223 aggctgcatacaa 22967235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 404
Target Start/End: Complemental strand, 23821269 - 23821158
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    |||||||||||||| ||||| ||| ||||||| || |||||| |||| ||||||||  ||||||||| |||||||||| ||||| || ||||| ||| ||    
T  23821269 tgaggggtaaccttcgcgcatctgataaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgt-aaaaataggata 23821171  T
Q  392 aggctgcgtacaa 404  Q
    ||||||| |||||    
T  23821170 aggctgcatacaa 23821158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 394
Target Start/End: Original strand, 17432336 - 17432395
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaagg 394  Q
    |||| |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  17432336 actgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagg 17432395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 404
Target Start/End: Original strand, 24097545 - 24097646
Alignment:
Q  303 cttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtac 402  Q
    |||||| ||||||||||| ||| | |||||| |||| ||||||||  ||| ||||||| ||| || |||||||  ||||||||||||||||||||| |||    
T  24097545 cttggcacaactggtaaaattgatgtcatgttactgaaaggtcacgagtttaagtcctcgaaccagcctcttgtataaaaaacagggtaaggctgcttac 24097644  T
Q  403 aa 404  Q
    ||    
T  24097645 aa 24097646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 28007629 - 28007699
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||| ||||||||||||||||| | ||||||| ||||||  |||||| |||||||||||||||||||||    
T  28007629 aaggtcacgggttcaagtcctggaaagagcctcttgtgtaaaa--cagggtcaggctgcgtacaatacaccaa 28007699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 17448325 - 17448389
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaa 404  Q
    |||||||| |||||||||  || ||||||| | ||| ||||||||||||||||||||||||||||    
T  17448325 aaggtcacgggttcaagttttgaaaacaacattttgtgtaaaaaacagggtaaggctgcgtacaa 17448389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 412
Target Start/End: Original strand, 25557743 - 25557796
Alignment:
Q  357 tcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| ||||||| ||||||  ||||||||||||||||||||||||||||    
T  25557743 tcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 25557796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 412
Target Start/End: Original strand, 26097178 - 26097231
Alignment:
Q  357 tcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| ||||||| ||||||  ||||||||||||||||||||||||||||    
T  26097178 tcctggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 26097231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 23240961 - 23240885
Alignment:
Q  335 actggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaat 413  Q
    |||| |||||||| ||| ||||||||||||||| ||||||| ||  |||||||||||||  ||||||||||| ||||||    
T  23240961 actgaaaggtcacaggtgcaagtcctggaaacagcctcttgtgt--aaaacagggtaagtttgcgtacaatataccaat 23240885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 412
Target Start/End: Complemental strand, 2755583 - 2755486
Alignment:
Q  315 ggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||||| |||||| |||| ||||||   |||||||||| || ||||| ||||||     ||||| ||| |||||||||||||||||||||||    
T  2755583 ggtaaagttgttgtcatgtgactgaaaggtcgtaggttcaagtcttgcaaacatcctcttataccaaaaataggctaaggctgcgtacaatacaccaa 2755486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 410
Target Start/End: Complemental strand, 14341166 - 14341134
Alignment:
Q  378 taaaaaacagggtaaggctgcgtacaatacacc 410  Q
    |||||||||||||||||||||||||||||||||    
T  14341166 taaaaaacagggtaaggctgcgtacaatacacc 14341134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 412
Target Start/End: Original strand, 11849063 - 11849126
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    ||||||||||| ||||||||||||||| || ||||||||| ||| | |||  ||||||||||||    
T  11849063 ggttcaagtccaggaaacaacctcttgtgttaaaaacaggataaagttgcccacaatacaccaa 11849126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 401
Target Start/End: Complemental strand, 4136648 - 4136590
Alignment:
Q  343 gtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    ||||| ||||||||||||  ||||||| ||||| |||||| ||||||||||| ||||||    
T  4136648 gtcacgggttcaagtcctaaaaacaacatcttgtgtaaaatacagggtaaggttgcgta 4136590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 401
Target Start/End: Complemental strand, 15865990 - 15865928
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgt-aaaaaacagggtaaggctgcgta 401  Q
    |||||||  ||||||| ||||||||||| |||||| ||| |||||||||||||| ||||||||    
T  15865990 aaggtcatgggttcaattcctggaaacagcctcttacgtaaaaaaacagggtaaagctgcgta 15865928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 419
Target Start/End: Original strand, 19340843 - 19340907
Alignment:
Q  354 aagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaatatgatg 419  Q
    ||||||| ||| || ||||||| |||||||||||||||||| |||  |||||||||||| ||||||    
T  19340843 aagtcctagaaccagcctcttgtgtaaaaaacagggtaaggttgc-aacaatacaccaaaatgatg 19340907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 412
Target Start/End: Original strand, 32068074 - 32068166
Alignment:
Q  317 taaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||| ||| || || | ||||||||  ||||||||| |||||||   |||||| |||||||||||| ||| ||||  |||||||||||||    
T  32068074 taaagttgttgtcacgtgaccgaaaggtcacatgttcaagtcttggaaac---ctcttgtgtaaaaaacaggataatgctgtttacaatacaccaa 32068166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 295 - 410
Target Start/End: Complemental strand, 13202 - 13088
Alignment:
Q  295 ggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaagg 394  Q
    ||||||||||||||||||| |||||||||||| |||||| |||| |||||||||||||||||||||||||||| ||||||||||| |||||| |||||||    
T  13202 ggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgta-aaaacaaggtaagg 13104  T
Q  395 ctgcgtacaatacacc 410  Q
    ||||||||||||||||    
T  13103 ctgcgtacaatacacc 13088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 302 - 412
Target Start/End: Original strand, 46794 - 46904
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    ||||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||| ||||||||||||||||| |||||||| ||||||||| ||||||    
T  46794 ccttggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgta 46893  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  46894 caatacaccaa 46904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 292 - 412
Target Start/End: Complemental strand, 24949 - 24834
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggta 391  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||  ||||||||||     |||| ||||||| |||||||||||||||    
T  24949 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggta 24855  T
Q  392 aggctgcgtacaatacaccaa 412  Q
    ||||||||||||| |||||||    
T  24854 aggctgcgtacaacacaccaa 24834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 412
Target Start/End: Original strand, 43672 - 43730
Alignment:
Q  352 tcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||| ||||||||| | ||||| ||||||  || |||||||||||||||||||||||||    
T  43672 tcaagttctggaaacagcgtcttgtgtaaaa--caaggtaaggctgcgtacaatacaccaa 43730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 302 - 412
Target Start/End: Original strand, 10773 - 10883
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||  ||| ||||||||||||| ||||||||||||||| ||||||||     
T  10773 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgtc 10872  T
Q  402 caatacaccaa 412  Q
    |||||||||||    
T  10873 caatacaccaa 10883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 298 - 412
Target Start/End: Original strand, 58936 - 59050
Alignment:
Q  298 gtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctg 397  Q
    |||||||||| |||||||||||| || || |||||| |||| |||||||| ||||||||||||||||||| |||||||  |||||||||||||||| |||    
T  58936 gtaaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactg 59035  T
Q  398 cgtacaatacaccaa 412  Q
    |||||||||||||||    
T  59036 cgtacaatacaccaa 59050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 412
Target Start/End: Complemental strand, 10226 - 10112
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    ||||||||||| ||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  ||||||| ||||| |    
T  10226 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagagtaagac 10129  T
Q  396 tgcgtacaatacaccaa 412  Q
    |||||||||||||||||    
T  10128 tgcgtacaatacaccaa 10112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 412
Target Start/End: Complemental strand, 20554 - 20440
Alignment:
Q  296 gggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggc 395  Q
    ||||||||||| ||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||| ||||||| ||  ||||||| ||||| |    
T  20554 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacagagtaagac 20457  T
Q  396 tgcgtacaatacaccaa 412  Q
    |||||||||||||||||    
T  20456 tgcgtacaatacaccaa 20440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 8898 - 8964
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtc 358  Q
    |||||||||||||||||||||| ||| |||||||| |||||| |||| || ||||| ||||||||||    
T  8898 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 8964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 19226 - 19292
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtc 358  Q
    |||||||||||||||||||||| ||| |||||||| |||||| |||| || ||||| ||||||||||    
T  19226 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 19292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 298 - 414
Target Start/End: Original strand, 4117 - 4232
Alignment:
Q  298 gtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctg 397  Q
    ||||||||| ||||||| ||||||||||| | |||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||| ||||| ||    
T  4117 gtaaccttg-cgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttg 4215  T
Q  398 cgtacaatacaccaata 414  Q
    |||||||||||||||||    
T  4216 cgtacaatacaccaata 4232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 408
Target Start/End: Complemental strand, 226588 - 226471
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttg-cgtaaaaaacagggt 390  Q
    |||| |||||||||||||||||||||||||||||| |||||| |||| |||||||| | |||||||||| |||||| ||||||| |  ||||||||||||    
T  226588 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggt 226489  T
Q  391 aaggctgcgtacaataca 408  Q
    |||||||| |||||||||    
T  226488 aaggctgcatacaataca 226471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 412
Target Start/End: Original strand, 11093 - 11202
Alignment:
Q  300 aaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcg 399  Q
    ||||||||||||||||||||||||||| | |||| |||| |||||||| ||||||||||||||||||| ||||||| ||  ||||||  ||||||||||     
T  11093 aaccttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaacaaagtaaggctgct 11189  T
Q  400 tacaatacaccaa 412  Q
    |||||||||||||    
T  11190 tacaatacaccaa 11202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 412
Target Start/End: Complemental strand, 1758 - 1649
Alignment:
Q  301 accttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgt 400  Q
    |||||| ||||| ||||||||||||| |||||| |||| |||||||  ||||||||||||| ||||||||||||| ||  |||||||| ||||||||| |    
T  1758 accttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgt--aaaacaggataaggctgcat 1661  T
Q  401 acaatacaccaa 412  Q
    ||||||||||||    
T  1660 acaatacaccaa 1649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 368
Target Start/End: Original strand, 83828 - 83904
Alignment:
Q  292 tgaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaa 368  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||| |||||||| |||||||||| |||||||||    
T  83828 tgaggggtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaa 83904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 35200 - 35079
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttg-ttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaa-aaaacagggt 390  Q
    ||||| |||| |||| |||||||||||||||  || |||||| |||| |||||||| ||||||||||||| |||||  |||||| ||   ||||||||||    
T  35200 gagggataactttggtgcaactggtaaagtttattgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggt 35101  T
Q  391 aaggctgcgtacaatacaccaa 412  Q
    ||||||||||||||||||||||    
T  35100 aaggctgcgtacaatacaccaa 35079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 383
Target Start/End: Original strand, 8848 - 8935
Alignment:
Q  293 gaggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaa 383  Q
    |||||||||||||| |||   ||||||||||||| |||||| |||| |||||||| ||||||| ||||||||||||| ||||| |||||||    
T  8848 gaggggtaaccttgacgc---tggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaaaaa 8935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 405
Target Start/End: Original strand, 23567 - 23665
Alignment:
Q  302 ccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgta 401  Q
    |||||||||||| |||||||||||    |||| |||| ||||  || |||||||||| || ||||||||||||| |||||||||||||| ||||||||||    
T  23567 ccttggcgcaac-ggtaaagttgt----atgtgactgaaagggtacgggttcaagtcttgcaaacaacctcttgtgtaaaaaacagggtgaggctgcgta 23661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 412
Target Start/End: Complemental strand, 73034 - 72929
Alignment:
Q  301 accttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaac-ctcttgcgtaaaaaacagggtaaggctgcg 399  Q
    |||||||||||||||||||||||||| ||||||         ||||| |||||||||||| |||||||  |||||| |||||||||| |||||||||||     
T  73034 accttggcgcaactggtaaagttgttgtcatgtgt-------gtcacgggttcaagtcctagaaacaagtctcttgtgtaaaaaacacggtaaggctgcc 72942  T
Q  400 tacaatacaccaa 412  Q
    |||||||||||||    
T  72941 tacaatacaccaa 72929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 24619 - 24692
Alignment:
Q  294 aggggtaaccttggcgcaactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaaca 367  Q
    ||||||||||||||| ||| || |||||||||| ||| || |||| |||||||| |||||||||||||||||||    
T  24619 aggggtaaccttggcacaattgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaaca 24692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 412
Target Start/End: Complemental strand, 48757 - 48696
Alignment:
Q  349 ggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||||  |||||||| ||||||| ||||||  ||||||||||||||||||||||||||||    
T  48757 ggttcaagtggtggaaacagcctcttgtgtaaaa--cagggtaaggctgcgtacaatacaccaa 48696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 383
Target Start/End: Original strand, 43085 - 43173
Alignment:
Q  297 ggtaaccttggcgc--aactggtaaagttgttatcatgtaactggaaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaa 383  Q
    ||||||||||||||  ||||||||||||| || |||||| | || ||||||||  ||||| ||||| |||||| ||||||| |||||||    
T  43085 ggtaaccttggcgcgcaactggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaa 43173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 412
Target Start/End: Original strand, 32931 - 33003
Alignment:
Q  340 aaggtcaccggttcaagtcctggaaacaacctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaa 412  Q
    |||||||  |||||||||||  |||| ||||||||  ||||||||||| ||||| |||  |||||||||||||    
T  32931 aaggtcatgggttcaagtccgcgaaaaaacctcttctgtaaaaaacagagtaagactgtatacaatacaccaa 33003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University