View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13608_low_4 (Length: 713)

Name: NF13608_low_4
Description: NF13608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13608_low_4
NF13608_low_4
[»] chr2 (49 HSPs)
chr2 (322-696)||(2294462-2294832)
chr2 (139-325)||(40613820-40614006)
chr2 (139-321)||(36168836-36169018)
chr2 (139-321)||(38273061-38273242)
chr2 (143-321)||(17473020-17473198)
chr2 (356-497)||(2322076-2322217)
chr2 (143-316)||(28863460-28863633)
chr2 (143-323)||(13438341-13438521)
chr2 (143-321)||(7465657-7465835)
chr2 (151-321)||(9058480-9058650)
chr2 (139-321)||(20700815-20700997)
chr2 (139-321)||(42257193-42257375)
chr2 (139-321)||(2533124-2533305)
chr2 (143-321)||(10249304-10249482)
chr2 (16-138)||(2294825-2294947)
chr2 (143-316)||(19930742-19930915)
chr2 (143-323)||(28381577-28381757)
chr2 (143-321)||(32505570-32505748)
chr2 (150-321)||(33436029-33436200)
chr2 (143-322)||(40701477-40701656)
chr2 (143-321)||(30915463-30915641)
chr2 (143-322)||(4060684-4060863)
chr2 (139-323)||(43490119-43490303)
chr2 (143-321)||(38882733-38882913)
chr2 (139-321)||(26891422-26891604)
chr2 (195-321)||(33436211-33436337)
chr2 (139-321)||(45097653-45097835)
chr2 (143-321)||(5574422-5574588)
chr2 (139-321)||(13365351-13365535)
chr2 (139-315)||(3439985-3440161)
chr2 (142-301)||(2997408-2997567)
chr2 (178-322)||(17819961-17820105)
chr2 (356-422)||(2304461-2304527)
chr2 (139-321)||(38732354-38732536)
chr2 (139-321)||(17823784-17823970)
chr2 (192-316)||(41575142-41575267)
chr2 (139-277)||(3737987-3738125)
chr2 (140-320)||(44151924-44152108)
chr2 (155-323)||(27864702-27864857)
chr2 (141-231)||(41758677-41758767)
chr2 (75-138)||(2304667-2304730)
chr2 (521-642)||(2321812-2321932)
chr2 (143-321)||(15428663-15428840)
chr2 (16-69)||(2310704-2310757)
chr2 (141-321)||(21301420-21301600)
chr2 (139-271)||(3034901-3035033)
chr2 (498-536)||(2321971-2322009)
chr2 (402-472)||(2332248-2332315)
chr2 (239-294)||(42849794-42849848)
[»] chr3 (46 HSPs)
chr3 (139-321)||(51419278-51419460)
chr3 (139-321)||(47531865-47532047)
chr3 (136-321)||(11347837-11348022)
chr3 (139-323)||(26141448-26141634)
chr3 (139-322)||(20764833-20765016)
chr3 (143-323)||(53982009-53982189)
chr3 (143-322)||(33644199-33644378)
chr3 (139-321)||(41189682-41189864)
chr3 (143-316)||(31456694-31456867)
chr3 (143-321)||(49607414-49607592)
chr3 (143-317)||(52629304-52629478)
chr3 (139-321)||(8076393-8076575)
chr3 (143-321)||(54868817-54868995)
chr3 (139-321)||(33118768-33118951)
chr3 (143-321)||(17470405-17470583)
chr3 (139-321)||(24699873-24700054)
chr3 (139-321)||(35536626-35536808)
chr3 (139-318)||(26754698-26754877)
chr3 (139-316)||(30801651-30801828)
chr3 (143-321)||(9562999-9563177)
chr3 (139-321)||(8956762-8956944)
chr3 (139-321)||(14623757-14623939)
chr3 (143-321)||(36707350-36707524)
chr3 (141-321)||(48375626-48375806)
chr3 (139-322)||(45058471-45058653)
chr3 (138-299)||(36331246-36331407)
chr3 (141-316)||(13897975-13898150)
chr3 (143-316)||(48587023-48587186)
chr3 (143-321)||(11095289-11095453)
chr3 (138-321)||(35965699-35965874)
chr3 (212-321)||(27714882-27714991)
chr3 (204-321)||(11907371-11907488)
chr3 (141-321)||(1758379-1758558)
chr3 (144-323)||(39670010-39670188)
chr3 (139-318)||(42823114-42823293)
chr3 (195-321)||(41080709-41080833)
chr3 (141-236)||(43746424-43746519)
chr3 (139-321)||(35093585-35093767)
chr3 (139-235)||(21746106-21746202)
chr3 (262-321)||(36331419-36331478)
chr3 (143-317)||(25395256-25395429)
chr3 (139-316)||(25407065-25407243)
chr3 (232-293)||(40480853-40480913)
chr3 (143-207)||(27714825-27714889)
chr3 (239-294)||(53581793-53581847)
chr3 (132-177)||(11140954-11140999)
[»] chr1 (38 HSPs)
chr1 (139-321)||(32813247-32813429)
chr1 (143-323)||(27564657-27564837)
chr1 (155-321)||(38632255-38632421)
chr1 (139-321)||(51898601-51898783)
chr1 (143-323)||(37649196-37649376)
chr1 (143-322)||(9474798-9474977)
chr1 (143-322)||(48716204-48716383)
chr1 (143-321)||(2581915-2582093)
chr1 (143-321)||(41758805-41758983)
chr1 (143-323)||(47452242-47452422)
chr1 (141-321)||(49811447-49811627)
chr1 (143-321)||(3000319-3000497)
chr1 (139-321)||(37926356-37926538)
chr1 (143-321)||(38595154-38595332)
chr1 (150-321)||(50630458-50630629)
chr1 (139-321)||(45044478-45044660)
chr1 (139-323)||(26440732-26440906)
chr1 (143-321)||(8346309-8346488)
chr1 (139-322)||(41608411-41608594)
chr1 (139-322)||(50590918-50591101)
chr1 (143-321)||(43132-43310)
chr1 (141-321)||(23597011-23597191)
chr1 (192-316)||(44548347-44548471)
chr1 (139-321)||(5958918-5959100)
chr1 (139-323)||(6260868-6261052)
chr1 (143-316)||(26274437-26274607)
chr1 (139-316)||(11152296-11152472)
chr1 (139-320)||(44453980-44454165)
chr1 (139-323)||(47748441-47748624)
chr1 (172-291)||(13414791-13414910)
chr1 (139-323)||(3302451-3302635)
chr1 (139-277)||(44332289-44332427)
chr1 (181-294)||(48489328-48489440)
chr1 (157-321)||(7740733-7740897)
chr1 (141-233)||(34339968-34340059)
chr1 (239-294)||(7447936-7447990)
chr1 (139-196)||(35003294-35003351)
chr1 (138-167)||(37814777-37814806)
[»] chr8 (38 HSPs)
chr8 (139-323)||(43414499-43414683)
chr8 (139-321)||(4854781-4854963)
chr8 (139-322)||(15048099-15048282)
chr8 (143-314)||(14547929-14548100)
chr8 (143-321)||(12831047-12831225)
chr8 (139-321)||(37038479-37038661)
chr8 (143-323)||(504043-504223)
chr8 (140-316)||(5957835-5958011)
chr8 (143-323)||(23122519-23122699)
chr8 (143-323)||(34012218-34012398)
chr8 (143-323)||(15197331-15197511)
chr8 (142-322)||(40423864-40424044)
chr8 (136-321)||(10284546-10284731)
chr8 (161-321)||(44507027-44507187)
chr8 (159-321)||(1179878-1180040)
chr8 (139-301)||(8841350-8841512)
chr8 (181-319)||(10621047-10621185)
chr8 (139-321)||(15258847-15259029)
chr8 (143-321)||(34307216-34307394)
chr8 (142-321)||(16056322-16056501)
chr8 (143-277)||(9122229-9122363)
chr8 (143-321)||(24307715-24307893)
chr8 (177-321)||(16383377-16383521)
chr8 (143-321)||(30479396-30479574)
chr8 (139-321)||(32032725-32032906)
chr8 (155-228)||(42710228-42710301)
chr8 (139-321)||(42221515-42221697)
chr8 (195-323)||(20074916-20075036)
chr8 (140-321)||(25838197-25838370)
chr8 (141-321)||(17443825-17444005)
chr8 (139-266)||(40467755-40467882)
chr8 (139-233)||(42354506-42354600)
chr8 (139-277)||(32707921-32708061)
chr8 (161-321)||(14055532-14055692)
chr8 (248-321)||(24307629-24307702)
chr8 (202-323)||(38229427-38229547)
chr8 (232-294)||(29705466-29705527)
chr8 (139-233)||(30183794-30183887)
[»] chr6 (24 HSPs)
chr6 (139-321)||(31976248-31976430)
chr6 (143-323)||(32869676-32869856)
chr6 (139-321)||(31110679-31110859)
chr6 (143-316)||(22880580-22880753)
chr6 (143-323)||(17598552-17598732)
chr6 (143-321)||(29857827-29858005)
chr6 (143-321)||(11427616-11427796)
chr6 (139-321)||(15989960-15990142)
chr6 (139-321)||(30341278-30341460)
chr6 (139-322)||(15507942-15508125)
chr6 (139-322)||(4231547-4231730)
chr6 (143-321)||(6209388-6209565)
chr6 (155-321)||(15832577-15832743)
chr6 (139-325)||(31952948-31953134)
chr6 (172-322)||(31109351-31109501)
chr6 (161-290)||(23128067-23128196)
chr6 (141-316)||(28536408-28536581)
chr6 (141-323)||(30870018-30870193)
chr6 (177-314)||(946383-946520)
chr6 (169-317)||(9379660-9379808)
chr6 (199-321)||(12732482-12732604)
chr6 (139-185)||(22421997-22422043)
chr6 (139-190)||(26466799-26466850)
chr6 (241-294)||(26669944-26669996)
[»] chr7 (43 HSPs)
chr7 (139-320)||(35522877-35523058)
chr7 (143-325)||(19329838-19330020)
chr7 (143-321)||(8080305-8080483)
chr7 (139-323)||(31735882-31736059)
chr7 (143-321)||(38837217-38837395)
chr7 (139-321)||(46033719-46033901)
chr7 (139-323)||(21234399-21234583)
chr7 (143-321)||(4999436-4999614)
chr7 (143-321)||(7389389-7389566)
chr7 (143-316)||(32951415-32951588)
chr7 (139-321)||(26296644-26296826)
chr7 (148-321)||(19436114-19436287)
chr7 (169-323)||(35137531-35137685)
chr7 (159-316)||(3784000-3784157)
chr7 (161-322)||(38267039-38267200)
chr7 (143-321)||(40957707-40957885)
chr7 (141-321)||(41915741-41915921)
chr7 (143-321)||(3434562-3434730)
chr7 (139-322)||(41423681-41423864)
chr7 (139-321)||(22343361-22343543)
chr7 (168-316)||(3694372-3694520)
chr7 (139-321)||(46374742-46374902)
chr7 (139-321)||(35468773-35468955)
chr7 (139-321)||(38044197-38044379)
chr7 (139-323)||(8238210-8238395)
chr7 (141-321)||(18207180-18207359)
chr7 (140-291)||(16374743-16374894)
chr7 (169-322)||(32564374-32564527)
chr7 (141-322)||(39255844-39256024)
chr7 (139-287)||(27744227-27744375)
chr7 (195-321)||(36208173-36208299)
chr7 (212-321)||(36361904-36362013)
chr7 (143-321)||(36362026-36362192)
chr7 (141-321)||(7727906-7728086)
chr7 (143-321)||(11044188-11044356)
chr7 (139-321)||(40846031-40846213)
chr7 (139-321)||(12310906-12311086)
chr7 (140-316)||(2318160-2318338)
chr7 (189-321)||(10343531-10343663)
chr7 (142-235)||(1766702-1766795)
chr7 (141-321)||(45223042-45223222)
chr7 (239-294)||(32029752-32029806)
chr7 (143-184)||(36361847-36361888)
[»] chr5 (33 HSPs)
chr5 (138-321)||(15409527-15409710)
chr5 (139-322)||(26720515-26720698)
chr5 (139-322)||(26990264-26990447)
chr5 (143-321)||(2740274-2740452)
chr5 (143-323)||(33149560-33149740)
chr5 (143-323)||(40145405-40145585)
chr5 (155-321)||(36732876-36733042)
chr5 (140-321)||(6679698-6679879)
chr5 (143-316)||(18520806-18520979)
chr5 (143-323)||(14831812-14831992)
chr5 (182-323)||(28177773-28177914)
chr5 (143-322)||(35785198-35785377)
chr5 (139-321)||(2252086-2252268)
chr5 (148-314)||(13811659-13811825)
chr5 (139-321)||(3921183-3921365)
chr5 (139-321)||(31008988-31009170)
chr5 (141-321)||(35943812-35943992)
chr5 (140-321)||(33825243-33825424)
chr5 (139-322)||(6259919-6260102)
chr5 (139-321)||(20073434-20073616)
chr5 (142-316)||(36875537-36875698)
chr5 (194-323)||(42414275-42414404)
chr5 (139-277)||(21370048-21370186)
chr5 (139-321)||(39688815-39688997)
chr5 (139-249)||(2177436-2177546)
chr5 (139-316)||(16327906-16328083)
chr5 (161-290)||(39557457-39557586)
chr5 (141-321)||(9603813-9603993)
chr5 (172-321)||(38296203-38296352)
chr5 (143-273)||(31132392-31132512)
chr5 (262-317)||(10356638-10356694)
chr5 (139-200)||(33855082-33855143)
chr5 (230-313)||(41470425-41470508)
[»] chr4 (43 HSPs)
chr4 (139-322)||(31910191-31910374)
chr4 (143-321)||(41236347-41236525)
chr4 (139-321)||(50052346-50052528)
chr4 (143-321)||(48182971-48183149)
chr4 (143-322)||(6034043-6034222)
chr4 (139-322)||(50526089-50526272)
chr4 (141-323)||(40574777-40574959)
chr4 (143-321)||(42044289-42044467)
chr4 (143-321)||(24995029-24995207)
chr4 (139-321)||(29239886-29240068)
chr4 (143-322)||(54473455-54473634)
chr4 (156-321)||(480382-480547)
chr4 (139-321)||(55475191-55475373)
chr4 (161-322)||(11511402-11511563)
chr4 (181-321)||(29234205-29234345)
chr4 (139-283)||(41823920-41824064)
chr4 (139-321)||(19670634-19670816)
chr4 (143-321)||(23608235-23608413)
chr4 (139-321)||(29547877-29548059)
chr4 (139-321)||(47986208-47986389)
chr4 (141-321)||(29977885-29978065)
chr4 (142-301)||(17983664-17983823)
chr4 (139-321)||(32766958-32767140)
chr4 (139-321)||(50813810-50813992)
chr4 (143-317)||(53352496-53352661)
chr4 (139-323)||(3481652-3481826)
chr4 (140-321)||(48647645-48647826)
chr4 (139-321)||(28480186-28480368)
chr4 (139-321)||(28481061-28481243)
chr4 (139-321)||(28481936-28482118)
chr4 (139-323)||(18924413-18924597)
chr4 (139-313)||(29589658-29589831)
chr4 (193-321)||(8343135-8343263)
chr4 (142-321)||(47104544-47104723)
chr4 (142-273)||(56300086-56300217)
chr4 (193-321)||(55079685-55079814)
chr4 (139-321)||(44536664-44536845)
chr4 (198-322)||(29535376-29535499)
chr4 (141-236)||(43487793-43487883)
chr4 (169-317)||(18769113-18769260)
chr4 (145-289)||(18768972-18769115)
chr4 (139-190)||(1771315-1771366)
chr4 (232-295)||(33703245-33703307)
[»] scaffold1268 (1 HSPs)
scaffold1268 (140-323)||(848-1031)
[»] scaffold1267 (1 HSPs)
scaffold1267 (140-323)||(848-1031)
[»] scaffold0237 (1 HSPs)
scaffold0237 (143-321)||(4029-4207)
[»] scaffold0321 (1 HSPs)
scaffold0321 (143-321)||(10031-10209)
[»] scaffold0110 (1 HSPs)
scaffold0110 (139-322)||(8781-8964)
[»] scaffold0018 (1 HSPs)
scaffold0018 (140-294)||(152525-152679)
[»] scaffold0316 (2 HSPs)
scaffold0316 (139-225)||(17199-17285)
scaffold0316 (212-323)||(17056-17163)
[»] scaffold0119 (1 HSPs)
scaffold0119 (241-294)||(798-850)


Alignment Details
Target: chr2 (Bit Score: 350; Significance: 0; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 322 - 696
Target Start/End: Complemental strand, 2294832 - 2294462
Alignment:
Q  322 atgtgttgatagttatggtactttttagtagatctcttgttattaagaaaatcatgaagcaccatttcactttggccataactctattctatgcatcact 421  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2294832 atgtgttgatagttatggtactttttagtagatctcttattattaagaaaatcatgaagcaccatttcactttggccataactctattctatgcatcact 2294733  T
Q  422 tctgcacactcaaaattacaagttacaaccctataatttaagaccacagatgtttagggaggaaacataatctataaccgccaagaccaaacagattaac 521  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2294732 tctgcacactcaaaattacaagttacaaccctataatttaagaccacagatgtttagggaggaaacataatctataaccgccaagaccaaacagattaac 2294633  T
Q  522 aaaataaaccaacttcaatattactacaacaaagatcatatatttttacaatgaaagtatcttgacttacaagaatgacaggcaaagtttttatttatac 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2294632 aaaataaaccaacttcaatattactacaacaaagatcatatatttttacaatgaaagtatcttgacttacaagaatgacaggcaaagtttttatttatac 2294533  T
Q  622 aggaaacaagatatataagaaagaacaataacatatgtgaaggcatatatatgtatgcataagggatcattatat 696  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||| ||||||||||||    
T  2294532 aggaaacaagatatataagaaagaacaataacatatgtgaaggcatata----tatgcataacggatcattatat 2294462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 139 - 325
Target Start/End: Original strand, 40613820 - 40614006
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||     
T  40613820 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatacattatgaagaaagaataggagagaaaagagaaagtgtgcttgtgcg 40613919  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcatgt 325  Q
    ||||||| |||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  40613920 gggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactcatgt 40614006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 36169018 - 36168836
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  36169018 ggaaaatgttacataaacaccctttattctcatacactcttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtatgcttgtgcg 36168919  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||    
T  36168918 gggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 38273061 - 38273242
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||| ||||||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  38273061 ggaaaatattacataaacaccatttattctcatacatc-ttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctagtgcg 38273159  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38273160 gggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 17473198 - 17473020
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 17473099  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  17473098 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 356 - 497
Target Start/End: Complemental strand, 2322217 - 2322076
Alignment:
Q  356 tcttgttattaagaaaatcatgaagcaccatttcactttggccataactctattctatgcatcacttctgcacactcaaaattacaagttacaaccctat 455  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2322217 tcttgttattaagaaaatcatgaagtaccatttcattctggccataactctattctatgcatcacttcagcacactcaaaattacaagttacaaccctat 2322118  T
Q  456 aatttaagaccacagatgtttagggaggaaacataatctata 497  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2322117 aatttaagaccacagatgtttagggaggaaacataatctata 2322076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 143 - 316
Target Start/End: Complemental strand, 28863633 - 28863460
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 28863534  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  28863533 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 28863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 143 - 323
Target Start/End: Complemental strand, 13438521 - 13438341
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 13438422  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||||| |||||||||||||||| ||||| ||||||| || |||||| |||||||||||||| ||||||    
T  13438421 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactcat 13438341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 7465657 - 7465835
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| | |||| |||||||||||||||||||||  ||||    
T  7465657 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaagagataaaagagaaagtgtgcttgtgtggggt 7465756  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  7465757 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 151 - 321
Target Start/End: Complemental strand, 9058650 - 9058480
Alignment:
Q  151 ataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtgg 250  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||     
T  9058650 ataaataccctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatga 9058551  T
Q  251 ccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  9058550 ctacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 20700997 - 20700815
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||| |||     
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttatgcg 20700898  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||||||| | |||||||| |||||||||| || || ||||||||||||||||  |||||||||||||||||||| ||||    
T  20700897 gggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 42257375 - 42257193
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||| ||||||| |||||||||||| | |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  42257375 ggaaaatattacatagacaccctttatttctatacactcttgtacaccccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgcg 42257276  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| |||||||||||||| |||||| ||||||||| ||| | |||||||||| |||| |||||||||||||||||||||    
T  42257275 gggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 2533305 - 2533124
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| |||||||||||||||     
T  2533305 ggaaaatgttatatatacaccctttattcccatacacccttgtacaccccatacattgggaagagagaagaggagataaaagaaaaagtgtgcttgtgcg 2533206  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||| | ||||| |||||||| |||||||||| ||||| ||||| ||||||||||  |||||||||||||||||||||||||    
T  2533205 gggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 10249304 - 10249482
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 10249403  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| ||| ||||||||| || |||||| |||||||||||||| ||||    
T  10249404 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 2294947 - 2294825
Alignment:
Q  16 aatattaaagagtgtctttaggatacttgttgtaagtattaaaaaattagaaattagtatttgtatgaattcaatttaacctatcaaatgaaaggtgaaa 115  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2294947 aatactaaagagtatctttaggatacttgttgtaagtattaaaaaattagaaattagtatttgtatgaactcaatttaacctatcaaatgaaaggtgaaa 2294848  T
Q  116 ctgttcaagttcccaatgtgttg 138  Q
    |||||||||||||||||||||||    
T  2294847 ctgttcaagttcccaatgtgttg 2294825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 143 - 316
Target Start/End: Original strand, 19930742 - 19930915
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 19930841  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    |||| || | |||||||| |||||||||||| ||| |||||||||||||||| |||||| ||||||||||||||    
T  19930842 ccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcat 19930915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 143 - 323
Target Start/End: Original strand, 28381577 - 28381757
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| | ||    
T  28381577 aatgatacatagacaccctttattcccatacatccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcggagt 28381676  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||| ||| | |||||||| ||||||||||||||||  || |||||||||||| |||||| |||||||||||||| ||||||    
T  28381677 ccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactcat 28381757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 32505570 - 32505748
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||| |||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||||||| ||||||||||||||||| ||||    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaatagaaagtgtgcttgtgcggggt 32505669  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| ||| ||||||||| || |||||| |||||||||||||| ||||    
T  32505670 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 150 - 321
Target Start/End: Original strand, 33436029 - 33436200
Alignment:
Q  150 cataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtg 249  Q
    |||| ||||| ||||||| |||||||||||||||||| ||| |||||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||    
T  33436029 catagacaccttttattctcatacacccttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtg 33436128  T
Q  250 gccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     | |||||| | |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  33436129 actacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 40701656 - 40701477
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| |||||| |||||||||||||||||||| || |||||||||||||||| | |||||||||||||||||||| |||||| ||||    
T  40701656 aatgatacatagacaccttttatttccatacacccttgtacacccgatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 40701557  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||  | |||||||| |||||||||||||||| ||| |||||||||||| |||||| |||||||||||||| |||||    
T  40701556 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 40701477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 30915641 - 30915463
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||| || ||||| |||||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||||||||||| | ||||    
T  30915641 aatgatacatagacatccattatttccatacacccttgtacaccccatgtattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 30915542  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||| |||||| || |||||||||||||||| |||||| |||||||||||||| ||||    
T  30915541 ccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 4060863 - 4060684
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||||||| | |||||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||| ||||||||||||| ||| || |    
T  4060863 aatgatacataaacatcttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaaaagaaagtgtgcttatgcgggat 4060764  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||  | |||||||| |||||||||||| ||| ||| ||||||||| || |||||| |||||||||||||| |||||    
T  4060763 ccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactca 4060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 139 - 323
Target Start/End: Complemental strand, 43490303 - 43490119
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||| ||  ||||||||||||||| || |||  ||||| ||||||| |||||||     
T  43490303 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagataaagtgtacttgtgcg 43490204  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    |||||||  ||||||| ||||| |||||||||||||||| || |||||||||| || |||||| ||| |||||||||||||||||    
T  43490203 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactcat 43490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 38882733 - 38882913
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc---ag 239  Q
    |||| |||||| | ||| |||||||||||||||||||||||||||||| ||||||||||||| || |  ||||||||||||||||| ||||||||    |    
T  38882733 aatgatacatagagaccatttattcccatacacccttgtacaccccatgcattaggaagagataagataagagaaaagagaaagtgcgcttgtgcggggg 38882832  T
Q  240 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||||| | |||||||| |||||||||||| ||| ||||||| |||||||| |||||| |||||||||||||| ||||    
T  38882833 ggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 26891422 - 26891604
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||| |||  |||||||  || |||||||  || ||||||||||||||| || |||| ||||||||| ||||||||| |     
T  26891422 ggaaaatgttacatatacacccttaattttcatacacatttttacaccctgtatattaggaagagagaagagaagaggaaagagaaaatgtgcttgttcg 26891521  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     |||||||||| |||| ||||| ||||||||||||||||  | ||||||||||||| |||||| || ||||||||||||||||    
T  26891522 aggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 195 - 321
Target Start/End: Complemental strand, 33436337 - 33436211
Alignment:
Q  195 taggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    ||||||||||||| |||| || ||||||||||||||||||||||  |||||| ||| ||||||||| |||||| ||||||||| ||| ||||||||||||    
T  33436337 taggaagagagaagaggataggaaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgcca 33436238  T
Q  295 tctaaggatgtctatgtatcataactc 321  Q
    |||||||||||||||||||||| ||||    
T  33436237 tctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 45097653 - 45097835
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||||||| | |||| |  ||||||| |||||||| || ||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  45097653 ggaaaatgttacataaacatcttttaattgcatacactcttgtacatccgatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 45097752  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||||||| ||||| |||||||| ||||||| || || |||||||||| |||||||||| |||||||||||||||    
T  45097753 gggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 5574422 - 5574588
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||            |||||||||||||||||||||| || |    
T  5574422 aatgatacatagacaccctttattcccatacacccttgtacacgccatgcattaggaagag------------aaaagagaaagtgtgcttgtgcgggat 5574509  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||| ||||||||| |||||||||||||||| |||||  |||||||||||||| ||||    
T  5574510 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 13365535 - 13365351
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||| ||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  13365535 ggaaaatgttacatagacaccttttaattgcattcacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 13365436  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaagg--atgtctatgtatcataactc 321  Q
    |||||||  ||| ||| ||||| |||||||||||||||| || |||| |||||||||||||||   ||| |||||||||||||||    
T  13365435 gggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgtgtttatgtatcataactc 13365351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 139 - 315
Target Start/End: Complemental strand, 3440161 - 3439985
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||| |||   ||| ||||||||| ||||||| ||||||||| |||||||||||     
T  3440161 ggaaaatgttacatagacaccctttatttccatacacctttgtacaccctatattctagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcg 3440062  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatca 315  Q
    ||||||||||   ||| ||| | ||||||||||||||||  | | ||||||||||| |||||| |||||| ||||||    
T  3440061 gggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 142 - 301
Target Start/End: Original strand, 2997408 - 2997567
Alignment:
Q  142 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 241  Q
    |||||||||||| ||||  |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| ||||||| |||    
T  2997408 aaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 2997507  T
Q  242 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaagg 301  Q
    ||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| ||||||    
T  2997508 tccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 178 - 322
Target Start/End: Original strand, 17819961 - 17820105
Alignment:
Q  178 ttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgt 277  Q
    ||||||||| ||| |||||||||||||||| ||||||  ||||||||| |||| |||||  ||||||||||  |||| ||||| ||||||||||||||||    
T  17819961 ttgtacacctcatgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgt 17820060  T
Q  278 taaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
     || ||||||||||||| |||  | ||||||||||||||||||||    
T  17820061 caaggggtgtattgccacctatagttgtctatgtatcataactca 17820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 356 - 422
Target Start/End: Complemental strand, 2304527 - 2304461
Alignment:
Q  356 tcttgttattaagaaaatcatgaagcaccatttcactttggccataactctattctatgcatcactt 422  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2304527 tcttgttattaagaaaatcatgaagcaccatttcactttggccataactctattctatgcatcactt 2304461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 38732536 - 38732354
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  |||||| ||||||||| | |||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  38732536 ggaaaatgttacatagacaccttttaattgcatacatccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 38732437  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  || |||| ||||| |||||||||||||||| || || ||||||| ||  ||||| ||| |||||||||||||||    
T  38732436 gggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 17823970 - 17823784
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||| ||||||||  ||||||||||||||||||||||| ||| ||||||||||| | ||||  |||||||||||||||||||       
T  17823970 ggaaaatgttacatagacatcctttatttacatacacccttgtacaccccatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatg 17823871  T
Q  239 gggtcc----acgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||    |  | |  |||||||| ||||||||||||||||| | |  |||||||||| |||||||||| |||||||||| ||||    
T  17823870 gggtccatatatatagttacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactc 17823784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 41575267 - 41575142
Alignment:
Q  192 cattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg-tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtatt 290  Q
    |||||||| ||||||| ||||||  |||||||||||||||||||| |||| ||||| || |||| ||||| |||||||||||  ||| ||||||||||||    
T  41575267 cattaggacgagagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtatt 41575168  T
Q  291 gccatctaaggatgtctatgtatcat 316  Q
     |||||||||||||||||||||||||    
T  41575167 accatctaaggatgtctatgtatcat 41575142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 139 - 277
Target Start/End: Complemental strand, 3738125 - 3737987
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||||| ||||  |||||||| |||||||||| |||   |||||||| |||| ||||||| ||| ||||| |||||||||||     
T  3738125 ggaaaatgttacatagacaccctatattttcatacacctttgtacaccctatattctaggaagaaagaagaggagaggaaaaagaaaatgtgcttgtgcg 3738026  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgt 277  Q
    |||||||| || |||| ||||| ||||||||||||||||    
T  3738025 gggtccacatgaccacatgtcagatttttgtgtgggtgt 3737987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 140 - 320
Target Start/End: Complemental strand, 44152108 - 44151924
Alignment:
Q  140 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 239  Q
    |||||||||||||||||||| ||||||| |||||||||||||| | | ||| |||||||||||||||| ||||||  ||||||||||||||||||||  |    
T  44152108 gaaaatgttacataaacaccttttattcgcatacacccttgtatatctcatgcattaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtgg 44152009  T
Q  240 ggt---ccacgtggccacgtgtcata-tttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataact 320  Q
    | |   | || |  |||||||||| | ||||| ||| |||||||||| |||||||| || |||  | ||||||||||||||||||    
T  44152008 gattcactacataaccacgtgtcagattttttttgtaggtgttaaagagtgtattgtcacctatagttgtctatgtatcataact 44151924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 155 - 323
Target Start/End: Complemental strand, 27864857 - 27864702
Alignment:
Q  155 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccac 254  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||||||             |||||||||||||||| ||| |||||||||||   ||    
T  27864857 acaccctttattctcatacacccttgtacatcccatgtattaggaagaga-------------aagagaaagtgtgcttttgcggggtccacgtgattac 27864771  T
Q  255 gtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    |||||| |||||||||||| ||| ||||||||||||||||  ||||| |||||||||||||| ||||||    
T  27864770 gtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactcat 27864702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 41758767 - 41758677
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgc 231  Q
    ||||||||||||| ||||  ||||||| |||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||    
T  41758767 aaaatgttacatagacacattttattctcatacatccttgtacaccccatatattaggaagagagaagaggagataaaagagaaaatgtgc 41758677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 2304730 - 2304667
Alignment:
Q  75 tttgtatgaattcaatttaacctatcaaatgaaaggtgaaactgttcaagttcccaatgtgttg 138  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2304730 tttgtacgaactcaatttaacctatcaaatgaaaggtgaaattgttcaagttcccaatgtgttg 2304667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 521 - 642
Target Start/End: Complemental strand, 2321932 - 2321812
Alignment:
Q  521 caaaataaaccaacttcaatattactacaacaaagatcatatatttt-tacaatgaaagtatcttgacttacaagaatgacaggcaaagtttttatttat 619  Q
    ||||||||| ||||||  ||||||| | ||||| |||||||| |||| |||| |||||||||||||||||||||||||||||| | | |||||  |||||    
T  2321932 caaaataaaacaactttgatattacaaaaacaa-gatcatattttttatacattgaaagtatcttgacttacaagaatgacagac-atgttttattttat 2321835  T
Q  620 acaggaaacaagatatataagaa 642  Q
    ||| |||||||||||||||||||    
T  2321834 acaagaaacaagatatataagaa 2321812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 15428663 - 15428840
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    ||||||||||| ||| | ||||  | ||||||||||||||||||| ||  | ||| |||||| || ||||||  ||||||||| |||| ||| |  ||||    
T  15428663 aatgttacatagacatcatttaccctcatacacccttgtacaccc-atgtactagaaagagaaaagaggagatgaaagagaaaatgtgtttgcgtggggt 15428761  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
      || ||||||| ||||| ||||||||||| ||||||| |||||||| ||||  ||||||||| |||||||||||||||    
T  15428762 ttacatggccacatgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactc 15428840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 2310757 - 2310704
Alignment:
Q  16 aatattaaagagtgtctttaggatacttgttgtaagtattaaaaaattagaaat 69  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2310757 aatactaaagagtgtctttaggatacttgttgtaagtattaaaaaattagaaat 2310704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 141 - 321
Target Start/End: Original strand, 21301420 - 21301600
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||| ||| |||||||||||| |||||||| | |||||||| ||| || |||||||| |||| || ||| ||||||||||||||| ||||| ||     
T  21301420 aaaatgttagatacacaccctttatttccatacactcatgtacacctcatgcactaggaagaaagaagagaagataaaagagaaagtgtgtttgtgtaga 21301519  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||| ||  ||||| ||  ||||||||||| || |  | | || ||||||||  ||| ||||||||| |||| ||||||    
T  21301520 gtccacatgatcacgtatctgatttttgtgtgagtatcgaggagtatattgccacttaaagatgtctatctatcgtaactc 21301600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 139 - 271
Target Start/End: Original strand, 3034901 - 3035033
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  |||||||| | ||||||| |||  ||||||||||||||| || |||  ||||||||||| | |||||||     
T  3034901 ggaaaatgttacatagacaccttttaattgcatacaccttggtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 3035000  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgt 271  Q
    |||||||  || |||| ||||| ||||||||||    
T  3035001 gggtccatatgaccacatgtcagatttttgtgt 3035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 536
Target Start/End: Complemental strand, 2322009 - 2321971
Alignment:
Q  498 accgccaagaccaaacagattaacaaaataaaccaactt 536  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  2322009 accgtcaagaccaaacagattaacaaaataaaccaactt 2321971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 472
Target Start/End: Complemental strand, 2332315 - 2332248
Alignment:
Q  402 actctattctatgcatcacttctgcacactcaaaattacaagttacaaccctataatttaagaccacagat 472  Q
    |||||||||| ||||||| ||||||||  |||||||||||| ||||||||||  || ||||||||||||||    
T  2332315 actctattctttgcatcatttctgcac--tcaaaattacaaattacaaccct-gaaattaagaccacagat 2332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 42849848 - 42849794
Alignment:
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  42849848 gggtccaagttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 42849794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 2e-79; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 51419278 - 51419460
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  51419278 ggaaaatgttacataaacaccttttatttccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcg 51419377  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||| | |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  51419378 gggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 47532047 - 47531865
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  47532047 ggaaaatgttacataaacaccctttattcccatacacacttgtacattccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcg 47531948  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||| ||  ||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  47531947 gggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 136 - 321
Target Start/End: Original strand, 11347837 - 11348022
Alignment:
Q  136 ttgggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 235  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  11347837 ttgggaaaatggtacatagacaccctttattcccatacacccttatacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttat 11347936  T
Q  236 gcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||||| |||||||||||||| |||||||||||| ||| ||||| ||||||| || ||||||||||||||||||||||||||    
T  11347937 gcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 139 - 323
Target Start/End: Original strand, 26141448 - 26141634
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagaga--gaataggagagaaaagagaaagtgtgcttgtg 236  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  26141448 ggaaaatgttacatagacaccctttatttccatacactcttgtacaccccatacattaggaagagaaagaagaggagagaaaagagaaagtgtgcttgtg 26141547  T
Q  237 cagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
      ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26141548 tggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactcat 26141634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 20764833 - 20765016
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |     
T  20764833 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacg 20764932  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||| |||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||    
T  20764933 gggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactca 20765016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 143 - 323
Target Start/End: Complemental strand, 53982189 - 53982009
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 53982090  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||||    
T  53982089 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcat 53982009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 33644378 - 33644199
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  33644378 aatgatacatagacaccctttattcccatacacccttatacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 33644279  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| | |||| |||||||||||||| |||||    
T  33644278 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactca 33644199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 41189682 - 41189864
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  41189682 ggaaaatgttacatagacaccctttatttccatacactcttgtacactccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgcg 41189781  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| |||||||||||||| |||||| ||||||||| ||| | |||||||||| |||||||||| |||||||||||||||    
T  41189782 gggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 143 - 316
Target Start/End: Complemental strand, 31456867 - 31456694
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  31456867 aatgatacataaacaccctttattcccatgcacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 31456768  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    |||| || | |||||||| |||||||||||||||| |||||||||||||||  ||| || ||||||||||||||    
T  31456767 ccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcat 31456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 49607592 - 49607414
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||||||||||||  ||| ||||||||||||| || ||||||||||||||||||||||||||||  || |    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggat 49607493  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  49607492 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 143 - 317
Target Start/End: Complemental strand, 52629478 - 52629304
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||| ||||| ||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||||||||||||| | ||||    
T  52629478 aatgatacatagacacccattatttccatacacccttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 52629379  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcata 317  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  52629378 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcata 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 8076575 - 8076393
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| |||||||  ||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||     
T  8076575 ggaaaatgttacatagacaccatttattctcatacacttttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcg 8076476  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||||||| | |||||| | |||||||||||||||| |||||||||| ||||| |||||| ||| |||||||||| ||||    
T  8076475 gggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 54868817 - 54868995
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| |||||| |||||||||||||||||||| || |||||||||||||||| | |||||||||||||||||||| |||||| ||||    
T  54868817 aatgatacatagacaccttttatttccatacacccttgtacaccctatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 54868916  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||  | |||||||| |||||||||||||||| ||| |||||||||||| |||||| |||||||||||||| ||||    
T  54868917 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 33118768 - 33118951
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaat-aggagagaaaagagaaagtgtgcttgtgc 237  Q
    |||||||||||| || |||||||||||| ||||||||||||||||||||||| || |||| ||||||||  ||||||| |||||||||||||| || ||     
T  33118768 ggaaaatgttacgtagacaccctttatttccatacacccttgtacaccccatgcactagggagagagaaggaggagaggaaagagaaagtgtgtttctga 33118867  T
Q  238 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     || |||||||| | |||||||| |||||||||||||||| ||||||||||||| || |||||| |||||||||||||||||||    
T  33118868 gggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 17470583 - 17470405
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| ||||||| ||||||   ||||||| ||||| |||||||||||||||| | ||||||||||||||||||||||||||  ||||    
T  17470583 aatgatacatagacaccatttattctcatacatatttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgtggggt 17470484  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||||||| |||||||||||| |||| | |||||||||||||| ||||    
T  17470483 ccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 24699873 - 24700054
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||| | ||||||| |||||| | || |||||| |||| | ||||||||||||| ||||||| |||||||||||||| |||| ||    
T  24699873 ggaaaatgttacatagacatcttttattctcatacatc-ttatacacctcataaactaggaagagagaagaggagaggaaagagaaagtgtgtttgtaca 24699971  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||||||||||||||| || |||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||    
T  24699972 gggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 35536808 - 35536626
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| |||||||||| || ||||||||||||| || |||  |||||| ||||||||||||| |    
T  35536808 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtgta 35536709  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     ||||||| || |||||||||| |||||| ||||||||| ||| ||||||||||||  |||||||||||||||||||| ||||    
T  35536708 aggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 139 - 318
Target Start/End: Complemental strand, 26754877 - 26754698
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||| ||||||| ||||||||| |||||||||| |||   ||||||||||||| ||||||| ||||||||| |||||||||||     
T  26754877 ggaaaatgttacatagacactctttatttccatacacctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcg 26754778  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataa 318  Q
    ||||||| ||| |||| ||||| |||||||||||| |||  ||||||||||||||| |||||| |||||||| |||||||    
T  26754777 gggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcataa 26754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 30801651 - 30801828
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||  | ||||||||||||| | ||||| ||||||||| ||||||||||      
T  30801651 ggaaaatgttacatagacaccttttattctcatacacccttgtacaccccatgtactaggaagagagaagatgagaggaaagagaaaatgtgcttgtgtg 30801750  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    |||||||  || | || |||||||||||||||||||| | ||||||||||||  || |||||| ||||||||||||||    
T  30801751 gggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcat 30801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 9563177 - 9562999
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| | |||||||||||||||||||| ||||||| | ||| |||||||||||||||| ||||||||| |||||||||||| ||||||||| |    
T  9563177 aatgatacatagataccctttattcccatacacctttgtacaactcatgcattaggaagagagaagaggagagaagagagaaagtgtgtttgtgcaggat 9563078  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||| | ||| ||| ||||| ||||||| ||||||| | ||| |||||||||| ||||    
T  9563077 ccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 8956944 - 8956762
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||| | ||||||| ||||||||||| |||||||  | || ||||||||||||| || |||  |||||| ||||||||||||| |    
T  8956944 ggaaaatgttacatagacagcatttattctcatacacccttctacaccctgtgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtgta 8956845  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     ||||||| ||  ||||||||| |||||| ||||||||| ||||| ||||||||||  |||||||||||||||||||| ||||    
T  8956844 aggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 14623757 - 14623939
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| |||||| |||| |||||| ||| || ||| ||||||||| || |||  ||||||||||||||||||||      
T  14623757 ggaaaatgttacatagacaccatttattctcatacatccttctacacctcatgcactagaaagagagaagagaagatgaaagagaaagtgtgcttgtgtg 14623856  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     ||||||| ||  ||| ||||| |||||| ||||||||| || ||||||||||||| ||||||||||||||||||||| ||||    
T  14623857 aggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 36707350 - 36707524
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| ||||||||||||||  |||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    || || |    
T  36707350 aatgatacatagacaccttttattcccatacattcttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgc----gcgggat 36707445  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||  | |||||||| |||||||||||| ||| ||||||||||||| || |||||| | |||||||||||| ||||    
T  36707446 ccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 141 - 321
Target Start/End: Original strand, 48375626 - 48375806
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||||||| |||||||||||| ||||||| | |||||||||| |||   ||||||||||||| ||||||| ||||||||| ||||||||||| ||    
T  48375626 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 48375725  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||| ||| ||||  |||| |||||||| ||| | || | |||||||||| || |||||| |||||||| ||||||||||    
T  48375726 gtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 45058471 - 45058653
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  |||||||| |||||||||||||  ||||||||||||||| || |||  ||||||||||| | |||||||     
T  45058471 ggaaaatgttacatagacaccttttaattgcatacaccattgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 45058570  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    |||||||  ||| ||| ||||| |||||| |||||||| | ||||||||||||||| |||||| ||| ||||||||||||||||    
T  45058571 gggtccatatggtcacatgtcagatttttatgtgggtg-tcaagggtgtattgccacctaagggtgtttatgtatcataactca 45058653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 138 - 299
Target Start/End: Original strand, 36331246 - 36331407
Alignment:
Q  138 gggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 237  Q
    |||||||||||||||| ||| | |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||    
T  36331246 gggaaaatgttacatatacatcttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 36331345  T
Q  238 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaa 299  Q
     |||||||  ||||||| ||||| |||||||||||||||| || ||||| ||||||| ||||    
T  36331346 ggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 141 - 316
Target Start/End: Original strand, 13897975 - 13898150
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||| ||| ||||| ||||||| |||||||  || ||||||||||||| |||| |||||||| || |||  ||||||||||||||||||||   |    
T  13897975 aaaatgttagatagacaccatttattctcatacacttttctacaccccatacactagggagagagaagagaagatgaaagagaaagtgtgcttgtgtgag 13898074  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    |||||| ||  ||||||||| |||||| ||||||||| || ||||||||||||| |||||||||| ||| ||||||    
T  13898075 gtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcat 13898150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 143 - 316
Target Start/End: Original strand, 48587023 - 48587186
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||          ||||||||||||||| ||||||| || |    
T  48587023 aatgatacatagacaccctttattcccatatacccttgtacatcccatgcattaggaagaga----------gaaaagagaaagtgtacttgtgcgggat 48587112  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    ||||||| | |||||||| |||||| ||| ||||| |||||||||||||||| |||||| | ||||||||||||    
T  48587113 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcat 48587186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 11095289 - 11095453
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||| || |||||||||||||            |||||||||||||| || ||| ||||    
T  11095289 aatgatacatagacaccctttattctcatacacccttgtacacccgatgcattaggaagaga------------aaagagaaagtgtgtttatgcggggt 11095376  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
      ||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  11095377 --acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 138 - 321
Target Start/End: Original strand, 35965699 - 35965874
Alignment:
Q  138 gggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 237  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||||||| |||  |||| ||| ||| || ||||||| |||||||||||||||||||||    
T  35965699 gggaaaatgttacatagacaccttttattctcatacacccttgtacacctcatgaattaagaaaagaaaagaggagaggaaagagaaagtgtgcttgtgc 35965798  T
Q  238 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||| |        |||||||||| |||||| ||||||||| ||||| ||||||  ||  ||||||||| |||||||||| ||||    
T  35965799 aggat--------ccacgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 27714882 - 27714991
Alignment:
Q  212 agagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgt 311  Q
    ||||| |||||||||||||||||||| |||||||| || | |||||||| |||||||||||||||| |||||||||||| ||| |||| | |||||||||    
T  27714882 agagagaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgt 27714981  T
Q  312 atcataactc 321  Q
    ||||| ||||    
T  27714982 atcattactc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 11907488 - 11907371
Alignment:
Q  204 agaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggat 303  Q
    |||| ||||||||||||||||| ||||||||||| |||||||  || |||| ||||| ||||||||||| ||||| | | |||||||| || |||||| |    
T  11907488 agaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggt 11907389  T
Q  304 gtctatgtatcataactc 321  Q
    ||||||||||||||||||    
T  11907388 gtctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 141 - 321
Target Start/End: Original strand, 1758379 - 1758558
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||||||||||||  |||||||  ||||||| |||||||||| || |||||||||||||||| ||||||  ||||||||| |||| |||||  |     
T  1758379 aaaatgttacataaacactgtttattc--atacacctttgtacaccc-atgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtgga 1758475  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaa--agggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||||  |||  ||||| |||||||||||||||| ||   ||||||||||| | ||| || || ||||||||||||||||    
T  1758476 gtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatcataactc 1758558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 144 - 323
Target Start/End: Complemental strand, 39670188 - 39670010
Alignment:
Q  144 atgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtc 243  Q
    |||||||| | ||| | |||||| || |||||||||||||| | ||||||||| |||||||||| |||||||||||||| |||||||| ||| |  ||||    
T  39670188 atgttacacagacatcatttatttccgtacacccttgtacatctcatacattaagaagagagaagaggagagaaaagaggaagtgtgcgtgtacgaggtc 39670089  T
Q  244 cacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||| ||  ||||||||| |||||| | | | ||| || || | ||||||||  ||||||||||||||||| |||||||||    
T  39670088 cacatgatcacgtgtcaaatttttatatagatgtcaagggatatattgccacataaggatgtctatgtat-ataactcat 39670010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 139 - 318
Target Start/End: Complemental strand, 42823293 - 42823114
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || | |  ||||||||||| | ||| |||     
T  42823293 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaataagaaagagaaagtatacttatgcg 42823194  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataa 318  Q
    |||||||  || |||| ||||| |||||| ||||||||| || ||||||||| |||  ||| | ||| ||||||||||||    
T  42823193 gggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcataa 42823114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 195 - 321
Target Start/End: Complemental strand, 41080833 - 41080709
Alignment:
Q  195 taggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    ||||||||||||| ||||||  ||||||||| ||||||||||  |||||||| || |||| | ||| ||||||| |||||||| ||||||||| |||| |    
T  41080833 taggaagagagaagaggagatgaaagagaaaatgtgcttgtg-tgggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta 41080735  T
Q  295 tctaaggatgtctatgtatcataactc 321  Q
     ||||||||||||||||||||| ||||    
T  41080734 -ctaaggatgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 43746519 - 43746424
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 236  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||| ||| || |||||||| |||| ||||||  ||||||||| |||| |||||    
T  43746519 aaaatgttacataaacaccctttgttgtcatacacccttgtacacctcatgcactaggaagaaagaagaggagatgaaagagaaattgtgtttgtg 43746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 35093767 - 35093585
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    |||||||||||| || ||| | ||||||| |||||||| ||||||| | ||| || ||||||||||||| |  |||   ||||||||||||||||||       
T  35093767 ggaaaatgttacctagacatcatttattctcatacacctttgtacatctcatgcactaggaagagagaaaaaaagatgcaagagaaagtgtgcttgtatg 35093668  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    | || ||| || |||| ||||| ||||||| |||| ||| ||| | ||||||| || |||| | |||||||||||| ||||||    
T  35093667 gagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgtaactc 35093585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 21746106 - 21746202
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 235  Q
    ||||||| ||||||  ||| | ||||||  |||||||||||||||||| |||| ||| ||||||||||| | ||||  |||||||||||||||||||    
T  21746106 ggaaaatattacatggacatcatttatttacatacacccttgtacacctcatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgt 21746202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 36331419 - 36331478
Alignment:
Q  262 atttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||||||| ||| || ||||| |||||||||||||| ||| |||||||||||||||    
T  36331419 atttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactc 36331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 317
Target Start/End: Original strand, 25395256 - 25395429
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    ||||||||||| ||| | ||||| | |||||| | |||||||||| ||  | ||| |||||| || || |||  ||||||||| |||| |||||  ||||    
T  25395256 aatgttacatagacatcttttatcctcatacatctttgtacaccc-atgtactagaaagagaaaagagaagatgaaagagaaaatgtgtttgtgtggggt 25395354  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcata 317  Q
    | |  | ||||| ||||| |||||||||||||| |||| || ||||| ||||  ||||||||| |||||||||||    
T  25395355 ctatatagccacatgtcagatttttgtgtgggtattaagggatgtatggccacataaggatgtttatgtatcata 25395429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 25407065 - 25407243
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||| |||  ||||||||||||  ||| |   || ||||||  |||||||||  |||||||| ||||||  |||||||||||||| |||||      
T  25407065 ggaaaatgttatatagtcaccctttattcttatatatatttatacaccttatacattagtgagagagaagaggagatgaaagagaaagtgtgtttgtgtg 25407164  T
Q  239 gggtccacgtggccacgtgtcata-tttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    || ||||  ||  ||||||||| | |||||||||| |||| || |||| |||||||| ||| || ||| ||||||||||    
T  25407165 ggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcat 25407243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 40480853 - 40480913
Alignment:
Q  232 ttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcc 293  Q
    ||||| |||||||| || ||||||||||| | ||||||||||||| ||||||||||||||||    
T  40480853 ttgtgtagggtccaggttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcc 40480913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 27714825 - 27714889
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaa 207  Q
    |||| |||||| |||| |||||||| | ||||||||||||||||||||  ||| |||||||||||    
T  27714825 aatgatacatatacactctttattctcgtacacccttgtacaccccatgtattgggaagagagaa 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 53581847 - 53581793
Alignment:
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  53581847 gggtccaggttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 53581793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 11140954 - 11140999
Alignment:
Q  132 tgtgttgggaaaatgttacataaacaccctttattcccatacaccc 177  Q
    |||||| ||||||||||||||| |||||||||| || |||||||||    
T  11140954 tgtgtttggaaaatgttacatagacaccctttagtctcatacaccc 11140999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 2e-79; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 32813429 - 32813247
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  32813429 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 32813330  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32813329 gggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 143 - 323
Target Start/End: Original strand, 27564657 - 27564837
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 27564756  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    |||||||   |||||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||||    
T  27564757 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcat 27564837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 155 - 321
Target Start/End: Original strand, 38632255 - 38632421
Alignment:
Q  155 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccac 254  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||| | ||    
T  38632255 acaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactac 38632354  T
Q  255 gtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||| |||||||||||| ||||||| |||||||||||| |||||| |||||||||||||| ||||    
T  38632355 gtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 51898601 - 51898783
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||| ||||||| ||| |||||||||||||||||     
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 51898700  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || |||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||| |||||||||||||||| ||||    
T  51898701 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 143 - 323
Target Start/End: Complemental strand, 37649376 - 37649196
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||| |  |    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagggaaagtgtgcttgtgcggaat 37649277  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
     |||||| |||||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||||| ||||||    
T  37649276 tcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactcat 37649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 9474798 - 9474977
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||| |||||||| |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  9474798 aatgatacatagacactctttattctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 9474897  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| |||||    
T  9474898 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 9474977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 48716204 - 48716383
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||||||| ||||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggt 48716303  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||| | |||||||| |||||||||||| ||| ||| |||||||||||| |||||| |||||||||||||| |||||    
T  48716304 ccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactca 48716383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 2582093 - 2581915
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| ||||||||||||||||||||  ||||||||||||||||| |||  ||||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  2582093 aatgatacataaacaccctttattctaatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaaaagaaagtgtgcttgtgcggggt 2581994  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  2581993 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 41758983 - 41758805
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 41758884  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||| ||| | |||||||| |||||||||||| ||| ||||||||||||||||| ||| | |||||||||||||| ||||    
T  41758883 ccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 143 - 323
Target Start/End: Original strand, 47452242 - 47452422
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||| ||||||||||||||| ||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| || |    
T  47452242 aatgatacatagacactctttattcccatacatccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 47452341  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||| | |||||||||||||||| |||||||||||| ||| |||||| |||||||||||||| ||||||    
T  47452342 ccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcat 47452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 141 - 321
Target Start/End: Original strand, 49811447 - 49811627
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |     
T  49811447 aaaatgttacatagacaccctttattctcatacacccttgtgcaccacatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgga 49811546  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||| |  |||| |||||||| |||||||||||| ||| ||| ||||||||| || |||||||||||||| |||||||||||    
T  49811547 gtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 3000497 - 3000319
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||| || ||||| |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| | ||||    
T  3000497 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 3000398  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| ||| |||||||||| ||||    
T  3000397 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 37926356 - 37926538
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||| ||| ||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |     
T  37926356 ggaaaatattatatagacaccatttattcacatacatccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtacttgtacg 37926455  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || |||| |||||||||||||| |||||| ||||||||||||| | |||||||||| |||| ||| |||||||||||||||||    
T  37926456 ggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 38595332 - 38595154
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||| || ||||| |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| | ||||    
T  38595332 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 38595233  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||| | ||| |||||||||| ||||    
T  38595232 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 150 - 321
Target Start/End: Complemental strand, 50630629 - 50630458
Alignment:
Q  150 cataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtg 249  Q
    |||| ||||| ||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  50630629 catagacaccatttattctcatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtg 50630530  T
Q  250 gccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     | |||||||| ||||||||||||||   ||||| |||||||||| |||||| | |||||||||||| ||||    
T  50630529 actacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 45044478 - 45044660
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    |||||||||||| || ||| | ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||     
T  45044478 ggaaaatgttacgtagacatcatttattctcatacacccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaaatgtgtttgtgcg 45044577  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| ||||| || ||||| |||||||| ||||||| ||| |||||||||||| |||||||  | |||||||||||||||    
T  45044578 gggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataactc 45044660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 139 - 323
Target Start/End: Complemental strand, 26440906 - 26440732
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||  |||||||||| ||||||||||          |||||||||||||||| |||     
T  26440906 ggaaaatgttacataaacatcctttattcctatacacccttgtacattccatacattacgaagagagaa----------aagagaaagtgtgcttatgcg 26440817  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    || |||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||    
T  26440816 ggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatcctaactcat 26440732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 8346309 - 8346488
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaat-aggagagaaaagagaaagtgtgcttgtgcaggg 241  Q
    |||| |||||||| ||| ||||||| |||||||| |||||||| |||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  8346309 aatgatacataaataccatttattctcatacacctttgtacactccatgcattaggaagagaaaaagaggagagaaaagagaaagtgtgcttgtgcaggg 8346408  T
Q  242 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||| | |||||||| |||||||||||||||| ||| |||||||||||| |||| | || ||||||||||| ||||    
T  8346409 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 41608411 - 41608594
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||| ||  ||||||||||||||| || |||  ||||||||||||| ||||| |     
T  41608411 ggaaaatgttacataaacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtacg 41608510  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    |||||||  ||||||| ||||| ||||||||||| |||| || ||||||||||||| |||||||||| ||||||||||||||||    
T  41608511 gggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactca 41608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 50590918 - 50591101
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| | ||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  50590918 ggaaaatgttacatagataccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50591017  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| ||||||||||||||||    
T  50591018 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 50591101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 43310 - 43132
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| | |||||||||||  |||||| |||||||||||||| |||||| ||||||||  ||||||||||||||||||||||||||||| | ||    
T  43310 aatgatacatagataccctttattcttatacactcttgtacaccccatgcattagaaagagagaggaggagagaaaagagaaagtgtgcttgtgcggagt 43211  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| ||||| ||||||| |  |||||  |||||||||||||| ||||    
T  43210 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 141 - 321
Target Start/End: Original strand, 23597011 - 23597191
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||||||| |||   ||||||| |||||| ||||| ||||| |||  | |||||| |||||||||||||||||||| |||||||| ||||||| |    
T  23597011 aaaatgttacatagacattttttattctcatacatccttggacacctcatgaactaggaatagagaataggagagaaaagataaagtgtgtttgtgcaag 23597110  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||| |||||||||||||||| |||||| ||||||| | |||| ||||||||||| |||| |||||||||||||||| ||||    
T  23597111 gtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 192 - 316
Target Start/End: Original strand, 44548347 - 44548471
Alignment:
Q  192 cattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattg 291  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||| | ||| |||||||||    
T  44548347 cattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattg 44548446  T
Q  292 ccatctaaggatgtctatgtatcat 316  Q
    ||| |||| ||||||||||||||||    
T  44548447 ccacctaaagatgtctatgtatcat 44548471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 5958918 - 5959100
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||  |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  5958918 ggaaaatgttacatagacacattttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 5959017  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  || |||| ||||| |||||||||||||||| ||  ||||||||||||  ||||| ||| |||||||||||||||    
T  5959018 gggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 139 - 323
Target Start/End: Complemental strand, 6261052 - 6260868
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||  |||||||| |||||||||| ||| | ||| ||||||||| ||||||  ||| ||||| ||||||| |||     
T  6261052 ggaaaatgttacatacacaccatttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaagaaatagaaaatgtgcttatgcg 6260953  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||||||| |||| ||| | |||||| |||||||||| | ||||||||| ||| |||||||| ||||| |||||||||||||    
T  6260952 gggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataactcat 6260868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 143 - 316
Target Start/End: Complemental strand, 26274607 - 26274437
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||||||||||||||||| || | ||| ||||||||||||||||   ||||||||||| ||||||| |||||||||| |    
T  26274607 aatgatacatagacaccctttattcccatacacccttgtgcatctcatgcattaggaagagagaa---gagagaaaagaaaaagtgtacttgtgcaggat 26274511  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    ||||||| | | |||||| |||||| ||||| ||| ||| | ||||||||||  ||||| ||||||||||||||    
T  26274510 ccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcat 26274437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 139 - 316
Target Start/End: Original strand, 11152296 - 11152472
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||| ||| ||||| ||||||| |||||| |||| |||||||||| || | ||||||||||| ||||||| ||| |||||| ||||||||||     
T  11152296 ggaaaatgttatatagacaccatttattctcatacatccttctacaccccatgcactgggaagagagaagaggagaggaaaaagaaagcgtgcttgtgcg 11152395  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    ||||| || || | |||||||| |||||||||||| |||  ||||||||||||||| |||||| ||||||||| ||||    
T  11152396 gggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg-tgtctatgtttcat 11152472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 139 - 320
Target Start/End: Complemental strand, 44454165 - 44453980
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtac----accccatacattaggaagagagaataggagagaaaagagaaagtgtgcttg 234  Q
    ||||||||||||||||||||| |||||||  |||||||||| |||    ||||||| |||||||||||||||| | ||||| ||||| ||||||||||||    
T  44454165 ggaaaatgttacataaacaccatttattcttatacacccttatactctgaccccatgcattaggaagagagaagatgagaggaaagaaaaagtgtgcttg 44454066  T
Q  235 tgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataact 320  Q
    ||  || |||||||  |||| ||||| |||||||||||||| | ||  | ||||||||||  ||| | ||||||||||||||||||    
T  44454065 tgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcataact 44453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 139 - 323
Target Start/End: Complemental strand, 47748624 - 47748441
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||| ||||||||||||||  ||||||||||||||| || |||  ||||||||||| | |||||||     
T  47748624 ggaaaatgttacatagacaccttttaattgcatacactcttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 47748525  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    || ||||  ||||||| ||||| |||||| | |||||| | ||||||||||||||| |||||| | | |||||||||||||||||    
T  47748524 ggatccatatggccacatgtcagatttttatatgggtg-tcaagggtgtattgccacctaagggtatttatgtatcataactcat 47748441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 172 - 291
Target Start/End: Complemental strand, 13414910 - 13414791
Alignment:
Q  172 acacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgt 271  Q
    ||||||| |||||| |||| |||||||||||||||| | || |||||||||||| ||||||||||  ||||||||||| | |||||| | ||||||||||    
T  13414910 acaccctagtacactccatgcattaggaagagagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgt 13414811  T
Q  272 gggtgttaaagggtgtattg 291  Q
    |||||| |||||||||||||    
T  13414810 gggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 139 - 323
Target Start/End: Original strand, 3302451 - 3302635
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||| ||||||| ||||||||  ||||||||||||||||||| ||| ||| ||||||||||| | ||||  ||| |||||||||||||||       
T  3302451 ggaaaatgttatataaacatcctttattaacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaaaagaaagtgtgcttgtatg 3302550  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    |||||||  ||   |||||||| ||||||||||||||||  | |  | ||||| || |||||||||| |||||||||| ||||||    
T  3302551 gggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactcat 3302635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 139 - 277
Target Start/End: Original strand, 44332289 - 44332427
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| | ||| |||| |  ||||||||||||||||| | ||  ||||||||||||||| || |||  ||||||||||| | |||||||     
T  44332289 ggaaaatgttacatagataccttttaattgcatacacccttgtacactctatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 44332388  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgt 277  Q
    |||||||   |||||| ||||| |||||| |||||||||    
T  44332389 gggtccatagggccacatgtcagatttttatgtgggtgt 44332427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 181 - 294
Target Start/End: Complemental strand, 48489440 - 48489328
Alignment:
Q  181 tacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaa 280  Q
    ||||||| ||| | ||||||||||||| ||| ||||||| ||||| ||||||||||| || |||||||| |||| ||||| |||||||||||| || |      
T  48489440 tacaccctatatactaggaagagagaagaggtgagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatg-tcc 48489342  T
Q  281 agggtgtattgcca 294  Q
    ||||||||||||||    
T  48489341 agggtgtattgcca 48489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 157 - 321
Target Start/End: Complemental strand, 7740897 - 7740733
Alignment:
Q  157 accctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgt 256  Q
    ||||||||||| | |||| | ||||||| ||||| ||  |||||||||||| ||||||  ||| ||||| | |  |||||  |||||||| | |||||||    
T  7740897 accctttattctcgtacatctttgtacatcccatgcaacaggaagagagaagaggagatgaaaaagaaaatatatttgtgtggggtccacatagccacgt 7740798  T
Q  257 gtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||||||| ||| ||||| || || ||||||| ||  ||||| |||| ||||||||||||||    
T  7740797 gtcatatttttatgtaggtgtcaatggatgtattgtcacataaggttgtcaatgtatcataactc 7740733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 34339968 - 34340059
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 233  Q
    ||||||||||||| ||||| ||||||  || |||| ||||||||||| || || | ||||||||||| || |||||||| ||||| |||||||    
T  34339968 aaaatgttacatagacaccttttattttca-acactcttgtacaccctatgcacttggaagagagaagagaagagaaaaaagaaactgtgctt 34340059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 7447936 - 7447990
Alignment:
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  7447936 gggtccaagttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 7447990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 35003294 - 35003351
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacaccc--ttgtacaccccatacatta 196  Q
    |||||||||||||| ||||||||||| |  |||||||||  |||||||||||||||||||    
T  35003294 ggaaaatgttacatgaacaccctttaat--catacaccctattgtacaccccatacatta 35003351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 37814777 - 37814806
Alignment:
Q  138 gggaaaatgttacataaacaccctttattc 167  Q
    ||||||||||||||||||||||||||||||    
T  37814777 gggaaaatgttacataaacaccctttattc 37814806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 1e-73; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 139 - 323
Target Start/End: Original strand, 43414499 - 43414683
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  43414499 ggaaaatgttacatagacaccctttattgccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 43414598  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    || |||| ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  43414599 ggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactcat 43414683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 4854781 - 4854963
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||| |||||||| |||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  4854781 ggaaaatgttacatagacactctttattctcatatacccttgtacatcccatacattagtaagagagaagaggagagaaaagagaaagtgtgcttgtgca 4854880  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| |||||||| | ||| |||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  4854881 gggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 15048099 - 15048282
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggaga-gaaaagagaaagtgtgcttgtgc 237  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  15048099 ggaaaatgttatatagacaccctttattccgatacacccttgtacatcccatacattaggaagagagaagaggagataaaaagagaaagtgtgcttgtgc 15048198  T
Q  238 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
     ||||||| ||||| |||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  15048199 ggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactca 15048282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 143 - 314
Target Start/End: Complemental strand, 14548100 - 14547929
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  14548100 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 14548001  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatc 314  Q
    ||||||| | |||||||| |||||||||||||||| ||| |||||||||||| |||||| ||||||||||||    
T  14548000 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatc 14547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 12831225 - 12831047
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 12831126  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||    
T  12831125 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 37038661 - 37038479
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||| ||||||| ||| |||||||||||||||||     
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 37038562  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || |||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||| |||||||||||||||| ||||    
T  37038561 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 143 - 323
Target Start/End: Original strand, 504043 - 504223
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| | |||||||||||||| |||||||||||| ||||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaatgtgtgcttgtgcggggt 504142  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||||| |||||||||||||||| ||| |||||||||||| |||||| |||||||||||||| ||||||    
T  504143 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactcat 504223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 140 - 316
Target Start/End: Complemental strand, 5958011 - 5957835
Alignment:
Q  140 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 239  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||| ||||||| |||||||||||||| |||||| |    
T  5958011 gaaaatgttacataaacaccctttattctcatacacccttgtacacctcatgcactaggaagagagaagaggagaggaaagagaaagtgtgattgtgcgg 5957912  T
Q  240 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    | |||||||| | |||||||| |||||||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  5957911 gatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcat 5957835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 143 - 323
Target Start/End: Original strand, 23122519 - 23122699
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaacaggagagaaaagagaaagtgtgcttatgcggggt 23122618  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||||| |||||||||||||||| ||| ||||||||||||  ||||| |||||||||||||| ||||||    
T  23122619 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactcat 23122699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 143 - 323
Target Start/End: Original strand, 34012218 - 34012398
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  34012218 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 34012317  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||| ||| |||||| |||||||||||||| ||||||    
T  34012318 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcat 34012398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 143 - 323
Target Start/End: Complemental strand, 15197511 - 15197331
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||  |||||||||||||||||||||||||| ||| |||| |||||||| || ||||||||||||||||||||||||||||| ||||    
T  15197511 aatgatacatagacactttttattcccatacacccttgtacacctcatgcatttggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 15197412  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||  |||||||||||||| ||||||    
T  15197411 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcat 15197331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 142 - 322
Target Start/End: Original strand, 40423864 - 40424044
Alignment:
Q  142 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 241  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||| |||  ||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 40423963  T
Q  242 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||| || | |||||||| |||||||||||| ||| |||||||||||||||| |||||| | |||||||||||| |||||    
T  40423964 tccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactca 40424044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 136 - 321
Target Start/End: Original strand, 10284546 - 10284731
Alignment:
Q  136 ttgggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 235  Q
    |||||||||||||||||| ||||| |||||||  ||||| ||||||||||||||| || ||||||||||||| | || || |||||||||||||||||||    
T  10284546 ttgggaaaatgttacatagacaccttttattcttatacaaccttgtacaccccatgcactaggaagagagaagatgaaaggaaagagaaagtgtgcttgt 10284645  T
Q  236 gcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || ||||||||||| | |||||||| |||||||||||||||| |||| |||||||| ||  ||||| |||||||||||||||||||    
T  10284646 gcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 161 - 321
Target Start/End: Original strand, 44507027 - 44507187
Alignment:
Q  161 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtca 260  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||| | ||||||||||| | ||||||||    
T  44507027 tttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtca 44507126  T
Q  261 tatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     ||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||| ||||    
T  44507127 gatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 159 - 321
Target Start/End: Original strand, 1179878 - 1180040
Alignment:
Q  159 cctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgt 258  Q
    |||||||||||||| | ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |  ||||| || | ||||||    
T  1179878 cctttattcccatatatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgt 1179977  T
Q  259 catatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || |||||||||||||||| |||||||||||| ||| |||||| |||||||||||||| ||||    
T  1179978 cagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 139 - 301
Target Start/End: Original strand, 8841350 - 8841512
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| ||||||| |||||||||||||| || |||||| |||||| ||||||| |||||||||||||||||||||     
T  8841350 ggaaaatgttacatagacaccatttattctcatacactcttgtacaccccatgcactaggaaaagagaagaggagaggaaagagaaagtgtgcttgtgcg 8841449  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaagg 301  Q
    ||||||||||| | |||||| | |||||||||||||||| |||||||||| ||||| ||||||    
T  8841450 gggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 10621047 - 10621185
Alignment:
Q  181 tacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaa 280  Q
    |||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| || || | ||||| |||||||| |||||||||||||||| ||    
T  10621047 tacatcccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaa 10621146  T
Q  281 agggtgtattgccatctaaggatgtctatgtatcataac 319  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  10621147 agggtgtattaccacctaaggatgtctatgtatcataac 10621185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 15258847 - 15259029
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||||||| ||||||||  ||||||| || |||   ||||||||||||| ||||||| ||||||||| ||||||||||||    
T  15258847 ggaaaatgttacatagacaccctttatttccatacacttttgtacatcctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgca 15258946  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||||||| |||| ||||| |||||| ||||| |||  | || ||||||||||||||||  | |||||||||||||||||    
T  15258947 gggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactc 15259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 34307394 - 34307216
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    ||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| ||||||| ||||    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 34307295  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     ||  || |||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  34307294 tcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 142 - 321
Target Start/End: Original strand, 16056322 - 16056501
Alignment:
Q  142 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 241  Q
    |||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||||||| |||    
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 16056421  T
Q  242 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||  ||||||| ||||| |||||||||||||||| || || ||||||| ||  ||||||||| |||||||||||||||    
T  16056422 tccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 143 - 277
Target Start/End: Complemental strand, 9122363 - 9122229
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||  |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  9122363 aatgatacatagacattctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 9122264  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgt 277  Q
    ||||||| | || ||||| ||||||||||||||||    
T  9122263 ccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 24307715 - 24307893
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    ||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||||||| ||||    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 24307814  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||  ||||||| | ||| |||||||||||||||| || || |||||||||| |||||| ||| |||||||||||||||    
T  24307815 ccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 177 - 321
Target Start/End: Complemental strand, 16383521 - 16383377
Alignment:
Q  177 cttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtg 276  Q
    ||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||||||| |||||||  ||||||| ||||| |||||||||||||||    
T  16383521 cttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtg 16383422  T
Q  277 ttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    | || ||||||||||||| |||||| ||| |||||||||||||||    
T  16383421 tcaaggggtgtattgccacctaagggtgtttatgtatcataactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 30479396 - 30479574
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    ||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| |||||||  |||    
T  30479396 aatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgaggt 30479495  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||  | ||||| ||||| |||||| ||||| ||| |||||||||||||||| |||||| ||| |||||||||||||||    
T  30479496 ccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 32032906 - 32032725
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || ||   ||||||||||||| ||||||||    
T  32032906 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaaggagaaagagaaagtgtacttgtgca 32032807  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || ||||  ||||||| ||||| |||||||||||| || | |||| |||||||||| |||||| ||| |||||||||||||||    
T  32032806 ggatccatatggccacatgtcagatttttgtgtggatg-tcaaggatgtattgccacctaagggtgtttatgtatcataactc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 42710228 - 42710301
Alignment:
Q  155 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtg 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42710228 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtg 42710301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 42221697 - 42221515
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||| ||||||| ||||||||  ||||||||||||||||||| ||| ||| ||||||||||| | ||||  |||||||||||||||||||       
T  42221697 ggaaaatgttatataaacatcctttatttacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatg 42221598  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||   |||||||| ||||||||||||||||  | |  ||||||| || |||||||||| |||||||||| ||||    
T  42221597 gggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 195 - 323
Target Start/End: Original strand, 20074916 - 20075036
Alignment:
Q  195 taggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    ||||||||||||| || |||| |||||||||||||||||||||||||||||||||        ||| |||||| ||||||||| |||| |||||||||||    
T  20074916 taggaagagagaagagaagaggaaagagaaagtgtgcttgtgcagggtccacgtg--------tcacatttttatgtgggtgtcaaagagtgtattgcca 20075007  T
Q  295 tctaaggatgtctatgtatcataactcat 323  Q
     ||||||||||||||||||||| ||||||    
T  20075008 cctaaggatgtctatgtatcattactcat 20075036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 140 - 321
Target Start/End: Complemental strand, 25838370 - 25838197
Alignment:
Q  140 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 239  Q
    |||||||||||||| | | |||||||| ||||||| |||||||||||| ||||||||| || |||||| ||||||||||||| ||||||||||||| | |    
T  25838370 gaaaatgttacatagatatcctttattgccatacaaccttgtacaccctatacattagcaaaagagaagaggagagaaaagaaaaagtgtgcttgtacgg 25838271  T
Q  240 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     ||||| ||| | |||||        |||||||| ||| |||  ||||||||||| |||||||| ||||| |||||||||||    
T  25838270 agtccatgtgacaacgtg--------ttgtgtggatgtcaaaaagtgtattgccacctaaggatatctatttatcataactc 25838197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 141 - 321
Target Start/End: Complemental strand, 17444005 - 17443825
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||||||| |||||||||||    ||||| ||||||||| | ||| || | ||||||||||| || |||  |||||||||||||  |||||  ||    
T  17444005 aaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactgggaagagagaagagaagatgaaagagaaagtgtctttgtgtggg 17443906  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||| || | || ||||| ||||||||||| |||||||   |||||||| || |||||| |||||||||||||||||||    
T  17443905 gtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 40467882 - 40467755
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||| |||||| |   |||||||||||||| | ||||||||||||| | ||||| |||||||||||||||||||||     
T  40467882 ggaaaatgttacatagacaccttttatccccataaatttttgtacaccccatagactaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcg 40467783  T
Q  239 gggtccacgtggccacgtgtcatatttt 266  Q
      |||||||||| ||| ||||| |||||    
T  40467782 aagtccacgtggtcacatgtcagatttt 40467755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 42354506 - 42354600
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 233  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| |||||||||| || ||||||||||||| || |||  |||||||||||||||||    
T  42354506 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgctt 42354600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 139 - 277
Target Start/End: Original strand, 32707921 - 32708061
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtg--cttgtg 236  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||||  ||||||    
T  32707921 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtgtacttgtg 32708020  T
Q  237 cagggtccacgtggccacgtgtcatatttttgtgtgggtgt 277  Q
    | |||||||  | ||||| | ||| |||||||| |||||||    
T  32708021 cggggtccatatagccacatctcagatttttgtatgggtgt 32708061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 161 - 321
Target Start/End: Original strand, 14055532 - 14055692
Alignment:
Q  161 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg-tccacgtggccacgtgtc 259  Q
    ||||||| |||||||| ||||| ||| ||| ||||| |||||||||| |  |||| ||||| |||||| ||||||| |||| |||||||| | || |||     
T  14055532 tttattctcatacacctttgtatacctcattcattaagaagagagaagatcagaggaaagaaaaagtg-gcttgtgtaggggtccacgtgactacatgta 14055630  T
Q  260 atatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    | |||||||||||| ||| || | |||||||| || |||||| |||| ||||||||||||||    
T  14055631 agatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 24307702 - 24307629
Alignment:
Q  248 tggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | ||| |||||||||||||||| || || |||||||||| |||||| ||| |||||||||||||||    
T  24307702 tggccacatatcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 323
Target Start/End: Complemental strand, 38229547 - 38229427
Alignment:
Q  202 agagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaagg 301  Q
    |||||| || |||| ||||||||| ||||||||| |||  |||||||| |||| ||||| |||||||||||||||| |  | | ||||||||| |||||     
T  38229547 agagaagagaagaggaaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtcag-gagcgtattgccacctaaga 38229449  T
Q  302 atgtctatgtatcataactcat 323  Q
     |||  ||||||||||||||||    
T  38229448 gtgttcatgtatcataactcat 38229427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 29705466 - 29705527
Alignment:
Q  232 ttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    |||||| ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  29705466 ttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 29705527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 30183794 - 30183887
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 233  Q
    ||||||||||| ||| ||| ||||||||  ||||||| ||||||||||||||| ||| |||||| |||| | || |  |||||||||||||||||    
T  30183794 ggaaaatgttagatagacatcctttatttacatacactcttgtacaccccatatatttggaagaaagaagatga-atgaaagagaaagtgtgctt 30183887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 2e-72; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 31976430 - 31976248
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  31976430 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 31976331  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||| || ||| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  31976330 gggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 143 - 323
Target Start/End: Complemental strand, 32869856 - 32869676
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  32869856 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32869757  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||| | ||||||    
T  32869756 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactcat 32869676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 31110679 - 31110859
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  31110679 ggaaaatgttacatagacatcctttatttccatacacctttgtacaccccatacattaggaagagagaagagtagagaaaagagaaagtgtgcttgtgca 31110778  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| ||||  |||||||| |||||  |||| |||| |||||||||||||||| ||||||||||||||||||||||||||    
T  31110779 gggtccatgtggttacgtgtcagatttt--tgtgagtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 143 - 316
Target Start/End: Original strand, 22880580 - 22880753
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  22880580 aatgatacatatacaccatttattcccatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 22880679  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    ||||||| | |||||||| | |||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  22880680 ccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 22880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 143 - 323
Target Start/End: Complemental strand, 17598732 - 17598552
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 17598633  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||||| |||||||||||||||| ||| | |||||||||| |||||| |||||||||||||| ||||||    
T  17598632 ccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactcat 17598552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 29858005 - 29857827
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||| || |    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 29857906  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||  | |||||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  29857905 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 11427796 - 11427616
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 11427697  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatcta--aggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| ||||| |||||||||| |||  ||| |||||||||||||| ||||    
T  11427696 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 15989960 - 15990142
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  15989960 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 15990059  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  15990060 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 30341278 - 30341460
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  30341278 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 30341377  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  30341378 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 15507942 - 15508125
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  |||||| |||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  15507942 ggaaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 15508041  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| ||||||||||||||||    
T  15508042 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 15508125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 139 - 322
Target Start/End: Complemental strand, 4231730 - 4231547
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  4231730 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 4231631  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    |||||||  ||||||||||||| |||||||||||||||  || ||||||||||||| |||| ||||| |||| |||||||||||    
T  4231630 gggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactca 4231547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 6209388 - 6209565
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| | ||||||||||||| |||| | ||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  6209388 aatgatacatagataccctttattccc-tacatctttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagtgcggggt 6209486  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | ||||| || ||||||||||| |||| |||  ||||||||||| |||||| |||||||||||||| ||||    
T  6209487 ccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 155 - 321
Target Start/End: Complemental strand, 15832743 - 15832577
Alignment:
Q  155 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccac 254  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||| |||||||||| |||  ||||||||| |||||||| | ||    
T  15832743 acaccctttattccaatacacccttgtacaccccatgcattaggaagatagaagaggagaaaaaagagaaaatgtatttgtgcaggatccacgtgactac 15832644  T
Q  255 gtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||| |||||||||||||||| ||| | | ||||| || |||| | |||||||||||||| ||||    
T  15832643 gtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactc 15832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 139 - 325
Target Start/End: Original strand, 31952948 - 31953134
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||| || ||||||||||||| || |||  |||||||||||||| |||||      
T  31952948 ggaaaatgttacatagacaccatttattctcatacatccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgtttgtgtg 31953047  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcatgt 325  Q
     ||||||| ||  ||| ||||| |||||| ||||||||| || ||||||||||||| |||||||||||||| |||||| ||||||||    
T  31953048 aggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactcatgt 31953134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 172 - 322
Target Start/End: Original strand, 31109351 - 31109501
Alignment:
Q  172 acacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgt 271  Q
    ||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||||| ||| ||| ||||| ||||| | |||||||| ||||||||||    
T  31109351 acacccttgtataccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgt 31109450  T
Q  272 gggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    || ||| |||||||||||||||| |||||| |||||||  ||||| |||||    
T  31109451 ggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactca 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 23128067 - 23128196
Alignment:
Q  161 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtca 260  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||| || ||||||||||||||||||||||||||||  || |||||||| | ||||||||    
T  23128067 tttatttccatacacccttgtacatcccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtca 23128166  T
Q  261 tatttttgtgtgggtgttaaagggtgtatt 290  Q
     |||||||||||||||| ||||| ||||||    
T  23128167 gatttttgtgtgggtgtcaaaggatgtatt 23128196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 141 - 316
Target Start/End: Original strand, 28536408 - 28536581
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||||||  ||| | ||||||  |||||||||||||||||||||| || ||||||||| ||| || ||| |||||||||||||||||||||  ||    
T  28536408 aaaatgttacatcgacatcatttattttcatacacccttgtacaccccatgcagtaggaagagggaagagaagataaaagagaaagtgtgcttgtgtggg 28536507  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    |||||| || |  ||||||| |||||||||||||||| || || |||||||||| |||||||||| ||||||||||    
T  28536508 gtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcat 28536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 141 - 323
Target Start/End: Complemental strand, 30870193 - 30870018
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||| ||| ||||||||||||  |||||||| |||||||||| ||| | ||| ||||||||| ||||||| ||||||||| ||||||||||| ||    
T  30870193 aaaatgtta-atagacaccctttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 30870095  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||| ||| |||| ||| | |||||| | ||||||||      ||| || |||||||||||| ||| |||||||||||||||    
T  30870094 gtccatgtgaccacatgttagatttttatatgggtgtt------tgttttaccatctaaggatatctgtgtatcataactcat 30870018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 946520 - 946383
Alignment:
Q  177 cttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtg 276  Q
    |||||||| | ||| |||||||||||||||| |||||||||||||||||||||||| | || || |  ||||| | | |||||| ||||||| || ||||    
T  946520 cttgtacatctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtg 946421  T
Q  277 ttaaagggtgtattgccatctaaggatgtctatgtatc 314  Q
    | ||||||||||||  || |||||||||||||||||||    
T  946420 tcaaagggtgtattatcacctaaggatgtctatgtatc 946383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 169 - 317
Target Start/End: Original strand, 9379660 - 9379808
Alignment:
Q  169 catacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttg 268  Q
    |||||| ||||||| |||  || ||||||||||||| || || |||  ||||||||| |||| |||||   | ||||| ||||||||||||| |||||||    
T  9379660 catacatccttgtataccttatgcattaggaagagaaaagagaagatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttg 9379759  T
Q  269 tgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcata 317  Q
    | ||||||| || || ||||||| |||||||||||||||||||||||||    
T  9379760 tatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcata 9379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 199 - 321
Target Start/End: Complemental strand, 12732604 - 12732482
Alignment:
Q  199 aagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatcta 298  Q
    ||||||||| ||||||  ||||||||| ||||||| ||  || ||||| | ||||||||||| |||||||||||||||| || |  | ||||||||  ||    
T  12732604 aagagagaagaggagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccactta 12732505  T
Q  299 aggatgtctatgtatcataactc 321  Q
    || ||||||||||||||| ||||    
T  12732504 agaatgtctatgtatcattactc 12732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 22421997 - 22422043
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacac 185  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  22421997 ggaaaatgttacatagacaccatttattctcatacacccttgtacac 22422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 26466799 - 26466850
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccat 190  Q
    |||||||||||||||||||||||||||||| | || || |||||||| ||||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccat 26466850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 26669996 - 26669944
Alignment:
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    ||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  26669996 gtccaggttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 26669944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 9e-72; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 139 - 320
Target Start/End: Complemental strand, 35523058 - 35522877
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||     
T  35523058 ggaaaatgttacataaacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcg 35522959  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataact 320  Q
    || ||||  ||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  35522958 ggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcataact 35522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 143 - 325
Target Start/End: Complemental strand, 19330020 - 19329838
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 19329921  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcatgt 325  Q
    |||||||   |||||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  19329920 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcatgt 19329838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 8080305 - 8080483
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 8080404  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||| ||| ||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  8080405 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 139 - 323
Target Start/End: Complemental strand, 31736059 - 31735882
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  31736059 ggaaaatgttagatagataccttttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 31735960  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    || |||| |||||||||||       |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  31735959 ggatccatgtggccacgtg-------tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactcat 31735882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 38837395 - 38837217
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  38837395 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 38837296  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||| |||||  ||||||||||||||| |||||| |||||||||||||| ||||    
T  38837295 ccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 46033719 - 46033901
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||     
T  46033719 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaatagagaagaggagagaaaagagaaaatatgcttgtgcg 46033818  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    | || || ||| |||||||||| |||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||    
T  46033819 gagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 139 - 323
Target Start/End: Complemental strand, 21234583 - 21234399
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| |||||||| |||||||||||||||||||||||||||| | |||||||  |||||||| |||||||||||     
T  21234583 ggaaaatgttacatagacaccttttattctcatacaccattgtacaccccatacattaggaagagaggaaaggagaggtaagagaaaatgtgcttgtgcg 21234484  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    |||| || ||||| |||||||| ||||||||||| |||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  21234483 gggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactcat 21234399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 4999436 - 4999614
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| |||||| ||||    
T  4999436 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagataaaagagaaagtgtgtttgtgcggggt 4999535  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||| ||| |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||||    
T  4999536 ccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 7389566 - 7389389
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||| |||||||||||||||||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  7389566 aatgatacatagacatcctttattcccatacaccct-gtacaccccatgtattaggaagagagagtaggagagaaaagagaaagtgtgcttgtgcggggt 7389468  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| |||| ||||||||||| |||||| |||||||||||||| ||||    
T  7389467 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 143 - 316
Target Start/End: Original strand, 32951415 - 32951588
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||| |||||| ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  32951415 aatgatacatagacaccccttattctcatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32951514  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    ||||||| | |||||| | |||||||||||| ||||||||| ||||||| ||||||||  ||||||||||||||    
T  32951515 ccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcat 32951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 26296826 - 26296644
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    |||||||||||| || ||||| | |||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| || ||||||||     
T  26296826 ggaaaatgttacgtagacaccatatatttccatacacccttgtacacctcatacattaagaagagagaagaggagagaaaagagaaaatgcgcttgtgcg 26296727  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||||||||| ||| |||||| ||||| ||||||||||| ||||| || ||||||||||||||||||||||||||    
T  26296726 gggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 148 - 321
Target Start/End: Original strand, 19436114 - 19436287
Alignment:
Q  148 tacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacg 247  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||| || || |||||||||||||||||||||| ||| || ||||||    
T  19436114 tacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagaaaagagaagagaaaagagaaagtgtgcttatgcgggatccacg 19436213  T
Q  248 tggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || | |||||||| |||||||||||||||| ||| ||||||||| || ||||||||||||||||||||| ||||    
T  19436214 tgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 169 - 323
Target Start/End: Complemental strand, 35137685 - 35137531
Alignment:
Q  169 catacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttg 268  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||| | |||||| | |||||||    
T  35137685 catacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttg 35137586  T
Q  269 tgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||||| |||||||||||||||| |||||| ||||||| |||||| ||||||    
T  35137585 tgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactcat 35137531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 159 - 316
Target Start/End: Complemental strand, 3784157 - 3784000
Alignment:
Q  159 cctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgt 258  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| | ||||||    
T  3784157 cctttattcacatacattcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgt 3784058  T
Q  259 catatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    || |||||||||||||||| ||| | |||||||||| |||||| ||||||||||||||    
T  3784057 cagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcat 3784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 161 - 322
Target Start/End: Complemental strand, 38267200 - 38267039
Alignment:
Q  161 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtca 260  Q
    |||||| ||||||||| | ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | ||||||||    
T  38267200 tttatttccatacaccttcgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtca 38267101  T
Q  261 tatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
     |||||||||||||||| ||||||||||||| ||  ||||| |||||||||||||| |||||    
T  38267100 gatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactca 38267039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 40957885 - 40957707
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||| |||||  |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| | || |    
T  40957885 aatgatacatagacacccattattttcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacgggat 40957786  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||| | |||| ||||||||||| |||||  |||||||||||||| ||||    
T  40957785 ccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 141 - 321
Target Start/End: Complemental strand, 41915921 - 41915741
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| ||||||| ||    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 41915822  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||  ||||||| ||||| |||||||||| ||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  41915821 gtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 3434730 - 3434562
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||          |||||||||||||||||||| || |    
T  3434730 aatgatacatagacaccctttattcccatacagccttgtacaccccatgcattaggaagagagaa----------aagagaaagtgtgcttgtgcgggat 3434641  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | ||||||||  ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  3434640 ccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 139 - 322
Target Start/End: Complemental strand, 41423864 - 41423681
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||| || ||||||||||||| ||||||  ||||||||| | ||||||| |     
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagaggagatgaaagagaaaatatgcttgtacg 41423765  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    || || ||||| |||| ||||| ||||||||||  |||| ||  |||||||| |||||||| ||||||||||||||||||||||    
T  41423764 ggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactca 41423681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 22343543 - 22343361
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  22343543 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 22343444  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||| ||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  22343443 gggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 3694520 - 3694372
Alignment:
Q  168 ccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatattttt 267  Q
    |||||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| || ||||| || | |||||||| ||||||    
T  3694520 ccatacactcttgtacaccccatgcattgggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagattttt 3694421  T
Q  268 gtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    |||||||||||||| ||||||||| || |||||| ||| ||| ||||||    
T  3694420 gtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcat 3694372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 46374742 - 46374902
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||                      |||||||||||     
T  46374742 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagaga----------------------tgtgcttgtgcg 46374819  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  46374820 gggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 35468773 - 35468955
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| |||||| |||| |||| | |||  | ||||||||||||| |||| || |||||||||||||| |||||||    
T  35468773 ggaaaatgttacatatacaccttttattctcatacatccttatacatctcatgaactaggaagagagaagaggataggaaagagaaagtgtgtttgtgca 35468872  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||| ||| ||| | | | |||||| ||||||||| ||| | |||||||||||||||||||||||||||||||| ||||    
T  35468873 gggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 38044379 - 38044197
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  |||||||||||| || || |||  ||||||||||||| |||||||     
T  38044379 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagaaaagagaagaagaaagagaaagtgtacttgtgcg 38044280  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  |||| || ||||| |||||||||||| ||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  38044279 gggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 139 - 323
Target Start/End: Complemental strand, 8238395 - 8238210
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| || || |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  8238395 ggaaaatgttacatagacgccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 8238296  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatcta-aggatgtctatgtatcataactcat 323  Q
    |||||||  || | || ||||| |||||||||||||||| |||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  8238295 gggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactcat 8238210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 141 - 321
Target Start/End: Complemental strand, 18207359 - 18207180
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||| ||| | ||||||||||  ||||||||||||||||| | || || ||||||||||||| ||||||  ||||||||||||||||||||  ||    
T  18207359 aaaatgttagatagataccctttattatcatacacccttgtacactctatccactaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtggg 18207260  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || ||||| ||||||||| | |||||||| ||||||| ||  |||||||||||| |||||| |||||||||||||||||||    
T  18207259 gttcacgt-gccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 140 - 291
Target Start/End: Original strand, 16374743 - 16374894
Alignment:
Q  140 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 239  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||| | ||||  |||||||| |||||||||||       
T  16374743 gaaaatgttacatagacaccctttattctcatacacctttgtacactccatacattaggaagagagaaaaagagatgaaagagaatgtgtgcttgtgtga 16374842  T
Q  240 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattg 291  Q
    | |||||||| |||||||||| |||||||||||| ||| || || |||||||    
T  16374843 gatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 169 - 322
Target Start/End: Original strand, 32564374 - 32564527
Alignment:
Q  169 catacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttg 268  Q
    |||||||||||||||||| |||  ||||||||||||||| || |||  |||||||||||||  |||||| |||||||  | ||||| ||||| |||||||    
T  32564374 catacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttg 32564473  T
Q  269 tgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||    
T  32564474 tgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactca 32564527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 141 - 322
Target Start/End: Original strand, 39255844 - 39256024
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||  | || ||   ||||||||||| ||||||  ||||||||||||| ||||||  |     
T  39255844 aaaatgttacatagacaccctttattatcatacacccttgtacattctatccaccgggaagagagaagaggagatgaaagagaaagtgttcttgtgtgga 39255943  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||||| |||||||||| |||||||| ||||| | ||  |||||||||||| |||||| ||||||||||||||||||||    
T  39255944 gtccacgtg-ccacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactca 39256024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 139 - 287
Target Start/End: Original strand, 27744227 - 27744375
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||| ||||||||| |||||||||||| | ||||||||| ||||| || ||||||||||||| ||||||| | ||||||| ||||||| ||      
T  27744227 ggaaaatgttatataaacaccatttattcccatatatccttgtacatcccatgcactaggaagagagaagaggagaggatagagaaaatgtgcttatgag 27744326  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgt 287  Q
    || ||||||||||||| ||||| |||||||||||||| | |||||||||    
T  27744327 ggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 195 - 321
Target Start/End: Complemental strand, 36208299 - 36208173
Alignment:
Q  195 taggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||| |||||  ||||||||||||||| || |  |||||| |||    
T  36208299 taggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattacca 36208200  T
Q  295 tctaaggatgtctatgtatcataactc 321  Q
     |||||| |||||||||||||||||||    
T  36208199 cctaagggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 212 - 321
Target Start/End: Original strand, 36361904 - 36362013
Alignment:
Q  212 agagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgt 311  Q
    |||||||||||||||||||||||||  ||||||||||| | |||||||| |||||||||||||||| ||||| |||||||||| |||||| |||||||||    
T  36361904 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgt 36362003  T
Q  312 atcataactc 321  Q
    ||||| ||||    
T  36362004 atcattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 36362192 - 36362026
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||| |||||||||||||||| |||||  ||||||||||||            ||||||||||||||||||||  ||||    
T  36362192 aatgatacatagacaccctttattctcatacacccttgtacatcccatgtattaggaagaga------------aaagagaaagtgtgcttgtgtggggt 36362105  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| ||||| |||||| ||| |||||| |||||||||||||| ||||    
T  36362104 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 141 - 321
Target Start/End: Complemental strand, 7728086 - 7727906
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||||||| ||||| |||| |  |||||| |||||||||||||||| ||||||||||||||| || |||  ||| ||||||||| ||||||| ||    
T  7728086 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaacagaaagtgtacttgtgcggg 7727987  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||  || |||| ||||| |||||| ||||  ||| ||  |||||||| ||| |||||| ||| |||||||||||||||    
T  7727986 gtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactc 7727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 11044356 - 11044188
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||| |||||||  |||||||| ||||||||| ||| |||||||||||||||| | ||||| ||||||||||||| ||||||| ||||    
T  11044356 aatgatacatagacactctttattttcatacacctttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtacttgtgcggggt 11044257  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | ||||||||           |||||| ||||| |||||||||| |||||| |||||||||||||| ||||    
T  11044256 ccacgtgactacgtgtca----------ggggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 11044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 40846031 - 40846213
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| | ||| |||| |  |||||||||||||||| | |||   |||||||||||||| || |||  |||||||||||||  ||||||     
T  40846031 ggaaaatgttacatagataccttttaattgcatacacccttgtacatctcatcttttaggaagagagaagagaagaagaaagagaaagtgtatttgtgcg 40846130  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  |  | || ||| | |||||||||||| ||| || ||||||||||||| |||||||||| |||||||||||||||    
T  40846131 gggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 12311086 - 12310906
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||| |   || | ||||||||||||| |||| || ||||| ||| ||||||||| ||    
T  12311086 ggaaaatgttacatagacaccctttatttccatacacctttgtacatcttgtatactaggaagagagaagaggaaaggaaagataaaatgtgcttgttca 12310987  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || |||||||| |||| ||||| |||||||| ||| | |  |  | | |||| ||| |||||| |||||||||||||||||||    
T  12310986 ggatccacgtgaccacatgtcagatttttgtatggatatcca--gatatatttccacctaagggtgtctatgtatcataactc 12310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 140 - 316
Target Start/End: Original strand, 2318160 - 2318338
Alignment:
Q  140 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattag-ga-agagagaataggagagaaaagagaaagtgtgcttgtgc 237  Q
    |||||||||||||| |||| ||||||| ||||||||| |||||||| |||| |||||| || |||||||| | ||||  ||||||||||| ||||| ||     
T  2318160 gaaaatgttacatagacacactttatttccatacacctttgtacactccatgcattagagagagagagaagatgagatgaaagagaaagtatgcttatgt 2318259  T
Q  238 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
     ||||||||||| ||||  |||| |||||||||||||||| ||  ||||| |||||| ||| || |||  |||||||||    
T  2318260 cgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 189 - 321
Target Start/End: Original strand, 10343531 - 10343663
Alignment:
Q  189 atacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgta 288  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||| | ||||| |||||||    || |||||| |||||||||||||||| ||   |||||    
T  10343531 atacactaggaagagagaagaggagaggaaagagaaagtgtgcgtctgcagagtccacggaaacatgtgtcagatttttgtgtgggtgtcaagatgtgta 10343630  T
Q  289 ttgccatctaaggatgtctatgtatcataactc 321  Q
    || ||| |||||| |||||||||||||| ||||    
T  10343631 tttccacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 1766702 - 1766795
Alignment:
Q  142 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 235  Q
    |||||||||||| |||| |||| ||| |||| || |||||| ||| |||| | || |||||||||| ||||||| |||||||||||||||||||    
T  1766702 aaatgttacatagacacactttgttctcatatactcttgtatacctcatatactacgaagagagaagaggagaggaaagagaaagtgtgcttgt 1766795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 321
Target Start/End: Complemental strand, 45223222 - 45223042
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||| ||||| ||| ||||||||  |||||| | |||||||||||||| ||| | ||||||||| | ||||  ||||||||| || ||||||    |    
T  45223222 aaaatgtcacatagacatcctttatttacatacatctttgtacaccccatatatttgaaagagagaagatgagatgaaagagaaaatgcgcttgtatgag 45223123  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||  |  ||   |||||||| |||||||||| | |||| |||  |||||||||| |||||||||| ||| |||||| ||||    
T  45223122 gttaatatgattacgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactc 45223042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 32029806 - 32029752
Alignment:
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  32029806 gggtccaagttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 32029752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 184
Target Start/End: Original strand, 36361847 - 36361888
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtaca 184  Q
    |||| |||||| ||||||||||||| ||||||||||||||||    
T  36361847 aatgatacatagacaccctttattctcatacacccttgtaca 36361888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 1e-70; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 138 - 321
Target Start/End: Original strand, 15409527 - 15409710
Alignment:
Q  138 gggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 237  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  15409527 gggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagagagtgtgcttgtgc 15409626  T
Q  238 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     ||||||| ||||| |||||||| |||||||||||||||| ||||  ||||||| || ||||||||||||||||||||||||||    
T  15409627 ggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 139 - 322
Target Start/End: Complemental strand, 26720698 - 26720515
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||| ||| ||| | ||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||     
T  26720698 ggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtgcg 26720599  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    || |||| |||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26720598 ggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactca 26720515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 139 - 322
Target Start/End: Complemental strand, 26990447 - 26990264
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||| ||| ||| | ||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||     
T  26990447 ggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtgcg 26990348  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    || |||| |||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26990347 ggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactca 26990264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 2740452 - 2740274
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||||||||||||||||||||| || |    
T  2740452 aatgatacatagacaccctttattcccatacacccttgtacatcccatgcattaggaagagagaaggggagagaaaagagaaagtgtgcttgtgcgggat 2740353  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  2740352 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 143 - 323
Target Start/End: Original strand, 33149560 - 33149740
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  33149560 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 33149659  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||| ||| |||||| |||||||||||||| ||||||    
T  33149660 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcat 33149740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 143 - 323
Target Start/End: Complemental strand, 40145585 - 40145405
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||| |||| ||||||||||||| | | |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  40145585 aatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 40145486  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||||| |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| ||||||    
T  40145485 ccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactcat 40145405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 155 - 321
Target Start/End: Original strand, 36732876 - 36733042
Alignment:
Q  155 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccac 254  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | |     
T  36732876 acaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactat 36732975  T
Q  255 gtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||| |||||||||||||||| |||||||||||||| | |||||| |||||||||||||| ||||    
T  36732976 gtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 140 - 321
Target Start/End: Complemental strand, 6679879 - 6679698
Alignment:
Q  140 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 239  Q
    |||||||||||||| ||| | ||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||| |    
T  6679879 gaaaatgttacatagacatcatttattgtcatacacccttgtacaccctatacattaggaagagagaagaggagagaaaagagaaaatgtgtttgtgcgg 6679780  T
Q  240 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||| ||| |||||||||| |||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||    
T  6679779 ggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 143 - 316
Target Start/End: Original strand, 18520806 - 18520979
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||  |||||||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 18520905  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  18520906 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 18520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 143 - 323
Target Start/End: Complemental strand, 14831992 - 14831812
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||| ||||||||||||||||| || |    
T  14831992 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagaaaaaaaagaaagtgtgcttgtgcgggat 14831893  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||| | |||||||| |||||| ||||||||| |||||||||||||||| |||||  |||||||||||||| ||||||    
T  14831892 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcat 14831812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 182 - 323
Target Start/End: Complemental strand, 28177914 - 28177773
Alignment:
Q  182 acaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaa 281  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| ||||||| ||| |||||||||| |||||||||||||||| |||    
T  28177914 acaccccatacattaggaagagggaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaa 28177815  T
Q  282 gggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  28177814 gggtgtattgccacctaaggatgtctatgtatcataactcat 28177773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 35785377 - 35785198
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||| |||||| || |    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcgggat 35785278  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||  | |||||||| |||||||||||||||| ||| |||||||||||| |||||| |||||||||||||| |||||    
T  35785277 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 35785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 2252086 - 2252268
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  2252086 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 2252185  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||||||| |||||||||||||||    
T  2252186 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 148 - 314
Target Start/End: Complemental strand, 13811825 - 13811659
Alignment:
Q  148 tacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacg 247  Q
    |||||| ||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  13811825 tacatagacaccatttattcccatacatccttgtacatcccatgcattaggaagagagaagaggagagagaagagaaagtgtgcttgtgcggggtccacg 13811726  T
Q  248 tggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatc 314  Q
    || | |||||||| |||||||||||||||| ||| | |||||||||| |||||| ||||||||||||    
T  13811725 tgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatc 13811659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 3921183 - 3921365
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  3921183 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 3921282  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  3921283 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 31009170 - 31008988
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||||| || ||||||||||||| || |||| ||| |||||||||||||||||     
T  31009170 ggaaaatgttacatagacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagagaagaggaaatagaaagtgtgcttgtgcg 31009071  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || |||||||| | |||||||| ||||||||||||||||  |||  ||||||| || |||||||||| |||||||||||||||    
T  31009070 ggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 141 - 321
Target Start/End: Original strand, 35943812 - 35943992
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||||||||| || |||||||||| || ||||||| ||||||||||||||||||||  ||    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatgcactaggaagagaaaagaggagaggaaagagaaagtgtgcttgtgtggg 35943911  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     |||||||  | |||||||| |||||||||||||||| ||| | |||||||||| |||||| |||||||||||||||||||    
T  35943912 atccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 140 - 321
Target Start/End: Original strand, 33825243 - 33825424
Alignment:
Q  140 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 239  Q
    |||||||||||||  ||||| ||||||| |||||| |||| |||||||||| || ||||||||||||| || ||| ||||||||||||||||||||| |     
T  33825243 gaaaatgttacattgacaccatttattctcatacagccttctacaccccatgcactaggaagagagaagagaagataaaagagaaagtgtgcttgtgtaa 33825342  T
Q  240 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||| ||| ||  ||||||||| |||||| ||||||||| || | ||||||||||| ||||| ||||||||| ||||| ||||    
T  33825343 ggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 6259919 - 6260102
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| | | |||||||||| |||||| |||||||| ||||||||||||  |||||||| ||||||  ||||||||||||||||| ||      
T  6259919 ggaaaatgttacatagatatcctttattcctatacacacttgtacatcccatacattagtgagagagaagaggagatgaaagagaaagtgtgcttctgtg 6260018  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
     |||||| ||| ||| |||| | ||||||| |||||||||||||||||||||| || ||| || ||| |||||||||| |||||    
T  6260019 aggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactca 6260102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 20073434 - 20073616
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||| ||| |||   ||||||| |||||||| ||||| | | |||  | ||||||||||||| ||||||| ||| ||||||||||||||||||    
T  20073434 ggaaaatgttagatagacattttttattctcatacacctttgtaaatctcatgaactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgca 20073533  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||||||| ||||||  | |||||| |||| |||| ||||||||||||| ||||||| ||||||||| |||||| ||||    
T  20073534 gggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 142 - 316
Target Start/End: Original strand, 36875537 - 36875698
Alignment:
Q  142 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 241  Q
    |||||||||||| ||||| |||||| |||    ||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||||||||| ||     
T  36875537 aaatgttacatagacaccatttatttcca----cccttgtacaccccatgtattaggaagagagaagaggagaaaaaagagaaagtgtgcttgtgcggga 36875632  T
Q  242 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
    |||||||| |         ||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  36875633 tccacgtgac---------tatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 36875698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 194 - 323
Target Start/End: Original strand, 42414275 - 42414404
Alignment:
Q  194 ttaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcc 293  Q
    |||||||||||||| |||| |||||||| ||||||||||||||| |||||||| || | |||||||| |||||||||||||||| |||||||||||||||    
T  42414275 ttaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcc 42414374  T
Q  294 atctaaggatgtctatgtatcataactcat 323  Q
    | |||  | |||||||||||||| ||||||    
T  42414375 acctactggtgtctatgtatcattactcat 42414404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 139 - 277
Target Start/End: Complemental strand, 21370186 - 21370048
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||| |  ||| | |||||||| |||| | ||||| ||||||||| |||| ||||||     
T  21370186 ggaaaatgttacataaacaccctttattttcatacacctttgtacatcttatatactaggaagaaagaagatgagaggaaagagaaaatgtgtttgtgcg 21370087  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgt 277  Q
    ||||||||||| |||| ||||| ||||||| ||||||||    
T  21370086 gggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 39688815 - 39688997
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  |||||||| |||||||||| ||  ||||||||||||||| |  |||  ||||||||||||| ||| |||     
T  39688815 ggaaaatgttacatagacaccttttaattgcatacacctttgtacaccctatgtattaggaagagagaagaaaagaagaaagagaaagtgtacttatgcg 39688914  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||| ||  || |||| | ||| |||||||||||||||| || || ||||||||||  ||||| ||| |||||||||||||||    
T  39688915 gggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactc 39688997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 2177546 - 2177436
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||| | ||||  ||||||| |||||||||||||||| || || || ||||||||||||| ||||||| ||||||||| ||||||||||      
T  2177546 ggaaaatgttacagagacacattttattctcatacacccttgtacatccaatgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtgtg 2177447  T
Q  239 gggtccacgtg 249  Q
    || ||||||||    
T  2177446 ggatccacgtg 2177436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 16328083 - 16327906
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||| ||||||||| ||||||  |||| ||  || ||||||||||| |||||| |||||||| || | |  ||||| ||||||||||||||      
T  16328083 ggaaaatgttagataaacaccatttattttcatatacttttctacaccccatatattagggagagagaagagaaaatgaaagaaaaagtgtgcttgtgtg 16327984  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 316  Q
     ||| ||| ||  ||||||||| |||||| ||||||||| || || |||||||||| |||||||| | ||| ||||||    
T  16327983 aggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcat 16327906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 39557457 - 39557586
Alignment:
Q  161 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtca 260  Q
    ||||||| |||| | || |||||||| |||  ||||||||||||||| |||||| ||||||||||||||| ||||   ||||||| |||  |||||||||    
T  39557457 tttattctcatagatccatgtacacctcatgtattaggaagagagaagaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtca 39557556  T
Q  261 tatttttgtgtgggtgttaaagggtgtatt 290  Q
     |||||||||||| ||||||  ||||||||    
T  39557557 gatttttgtgtggatgttaagaggtgtatt 39557586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 141 - 321
Target Start/End: Complemental strand, 9603993 - 9603813
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    |||||||||| || ||||| ||||||| |||||||| ||||||| ||||  || || |||||||||| | || |  |||||||||||||| ||||   ||    
T  9603993 aaaatgttacgtagacaccatttattctcatacacctttgtacatcccaagcactaagaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 9603894  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||  || ||| |||||| |||||||||| ||||| || | |||||||  || |||||||||| |||||||||| ||||    
T  9603893 gtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcattactc 9603813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 172 - 321
Target Start/End: Complemental strand, 38296352 - 38296203
Alignment:
Q  172 acacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgt 271  Q
    ||||| || ||||||||||  | || ||||| |||| ||||||  || |||||||||||||||||  || ||||||| || |||||||  ||||||||||    
T  38296352 acacctttatacaccccatgtagtaagaagaaagaagaggagatgaatgagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgt 38296253  T
Q  272 gggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||| ||||  ||||||||| || |||||   ||||||||||||||||||    
T  38296252 gggtattaagaggtgtattgacacctaagatagtctatgtatcataactc 38296203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 273
Target Start/End: Complemental strand, 31132512 - 31132392
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||||||||||||||||  |||||||||||||||||| ||| |||||| ||          ||||||||||| ||||| ||||||||| ||||    
T  31132512 aatgatacataaacaccctttattttcatacacccttgtacacctcatgcattagaaa----------gagagaaaagaaaaagtatgcttgtgcggggt 31132423  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgg 273  Q
    ||||||| | || ||||| ||||||||||||    
T  31132422 ccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 10356694 - 10356638
Alignment:
Q  262 atttttgtgtgggtgttaaaggg-tgtattgccatctaaggatgtctatgtatcata 317  Q
    |||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||    
T  10356694 atttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcata 10356638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 200
Target Start/End: Complemental strand, 33855143 - 33855082
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaa 200  Q
    |||||||||||||| ||||||||||||||| | || || |||||||||||||  ||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaa 33855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 313
Target Start/End: Original strand, 41470425 - 41470508
Alignment:
Q  230 gcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtat 313  Q
    |||||||| ||||||||||| | |||||||| |||||| | ||  | ||||||| |||||||||| |||| | |||||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtat 41470508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 2e-63; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 139 - 322
Target Start/End: Complemental strand, 31910374 - 31910191
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||     
T  31910374 ggaaaatgttacatagacaccatttattcccatacactcttgtacatcccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcg 31910275  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||| ||||| | |||||| |||||||||||||||| |||| |||||||| || |||||||||||||||||||||||||||    
T  31910274 gggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactca 31910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 41236525 - 41236347
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 41236426  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||| ||| ||| |||||||||||| |||||| |||||||||||||| ||||    
T  41236425 ccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 50052346 - 50052528
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||  || || ||||||||||||| ||||||| |||||||||||||||||||||     
T  50052346 ggaaaatgttacatagacaccctttattcccatacacctttgtacaccttatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcg 50052445  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||||||| | |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  50052446 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 48182971 - 48183149
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 48183070  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||||||||||||| ||||||||||||||||  ||||| |||||||||||||| ||||    
T  48183071 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 6034222 - 6034043
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 6034123  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||| | || ||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| |||||    
T  6034122 ccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 6034043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 50526089 - 50526272
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||| ||||||| ||| |||||| ||||||||||     
T  50526089 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagcgtgcttgtgcg 50526188  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    |  |||||||| |||||||||| |||||||||||||||| |||||||||||||||| |||| |||||||||||||||| |||||    
T  50526189 gaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactca 50526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 141 - 323
Target Start/End: Complemental strand, 40574959 - 40574777
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||| ||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgttcggg 40574860  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
     |||| || ||  ||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  40574859 atccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactcat 40574777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 42044289 - 42044467
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  42044289 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 42044388  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| ||||||||||||||||  |||| |||||||||| |||||| |||||||||||||| ||||    
T  42044389 ccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactc 42044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 24995029 - 24995207
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||| ||||    
T  24995029 aatgatacatagacaccctttattcccatacaccattgtacaccccatgcattaagaagagagaagaggagagaaaagagaaaatgtgcttgtgcggggt 24995128  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||| ||||||||| ||||||||||||||||||||||| |||| || |||||| ||||    
T  24995129 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 29240068 - 29239886
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||      
T  29240068 ggaaaatgttacatagacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgtg 29239969  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||||||| | |||||| | |||||||||||| ||| ||| |||||||||||| |||||| |||||||||||||| ||||    
T  29239968 gggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 54473455 - 54473634
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| ||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  54473455 aatgatacatgaacaccctttattcccatacacccttgtacactccatgtattaggaagagagaagaggagagaaaagataaagtgtgcttgtgcggggt 54473554  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||| | |||||| | |||||||||||||||| ||| ||||||||| || |||||| |||||||||||||| |||||    
T  54473555 ccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactca 54473634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 156 - 321
Target Start/End: Original strand, 480382 - 480547
Alignment:
Q  156 caccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacg 255  Q
    ||||| ||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| | |||    
T  480382 cacccattatttccatacacctttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacg 480481  T
Q  256 tgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||| |||||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||    
T  480482 tgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 55475373 - 55475191
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||| ||||    
T  55475373 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgca 55475274  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  55475273 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 161 - 322
Target Start/End: Original strand, 11511402 - 11511563
Alignment:
Q  161 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtca 260  Q
    |||||| ||||||||||||||||||| ||| ||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||| | ||||||||    
T  11511402 tttatttccatacacccttgtacacctcatgcattaagaagagagaagagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtca 11511501  T
Q  261 tatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
     |||||| ||||||||| |||||||||||||||| |||||| |||||||||||||| |||||    
T  11511502 gatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 11511563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 181 - 321
Target Start/End: Original strand, 29234205 - 29234345
Alignment:
Q  181 tacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaa 280  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||  ||| | ||    
T  29234205 tacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaa 29234304  T
Q  281 agggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  29234305 agggtgtattgccatctaagggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 139 - 283
Target Start/End: Complemental strand, 41824064 - 41823920
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| ||||||| |||||||| ||||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||     
T  41824064 ggaaaatgttacatagacaccatttattctcatacacctttgtacacctcatgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcg 41823965  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagg 283  Q
    ||||||| ||| | |||||||| ||||||||||||||||||||||    
T  41823964 gggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 19670634 - 19670816
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  19670634 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 19670733  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||||||| ||||| ||||||||||| |||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  19670734 gggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 23608413 - 23608235
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||| |||||||||||||||| || |||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||  | ||    
T  23608413 aatgatacatagacatcctttattcccatacatccctgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgtggagt 23608314  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     |||||| | |||||||| |||||||||||||||| ||| ||||||||| ||||||||| ||||||| |||||| ||||    
T  23608313 tcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 29547877 - 29548059
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||| ||||||| ||| |||     
T  29547877 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagaaaaagtgtacttatgcg 29547976  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || ||||  ||||||| ||||| |||||||||||||||| || || |||||||||| |||||||||| |||||||||||||||    
T  29547977 ggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 47986389 - 47986208
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| || ||| | ||||||||||||||| |||||  ||||||||||||||| || | |  ||||||||||||| |||||||     
T  47986389 ggaaaatgttacatagacacctttaattgc-atacacccttgtacatcccatgtattaggaagagagaagagaataagaaagagaaagtgtacttgtgcg 47986291  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||||||| ||||| |||||||||||| ||| || || |||||||||| |||||| ||| |||||||||||||||    
T  47986290 gggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 141 - 321
Target Start/End: Complemental strand, 29978065 - 29977885
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 240  Q
    ||||||||||||| | | | |||||||| |||||| |||||||||||||||||||||  ||||| || || |||  ||||||||||||||||||||  ||    
T  29978065 aaaatgttacatagatatcttttattcctatacacacttgtacaccccatacattagtgagagaaaagagaagatgaaagagaaagtgtgcttgtgtggg 29977966  T
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||  || | |||||||| ||||||||||||||||||| ||||||||||||| ||| || | | |||||||||| ||||    
T  29977965 gtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 142 - 301
Target Start/End: Original strand, 17983664 - 17983823
Alignment:
Q  142 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 241  Q
    |||||||||||| ||||  |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| ||||||| |||    
T  17983664 aaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 17983763  T
Q  242 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaagg 301  Q
    ||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| ||||||    
T  17983764 tccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 139 - 321
Target Start/End: Complemental strand, 32767140 - 32766958
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||  |||| |  ||||||||||||||||| | ||  ||||| ||||||||  || |||  ||||||||||||| ||||||||    
T  32767140 ggaaaatgttacatagacacattttaattgcatacacccttgtacactctatgtattagaaagagagaggagaagaagaaagagaaagtgtacttgtgca 32767041  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||  ||||||| ||||| |||||||| ||||||| || ||||||||||||| |||||  ||| |||||||||||||||    
T  32767040 gggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 50813810 - 50813992
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||| | |||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  50813810 ggaaaatgttacatagacaccttttaattgcatacacccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50813909  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||| ||  || |||| ||||| |||||||||||||||| || ||||||||| ||| |||||  ||| |||||||||||||||    
T  50813910 gggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 143 - 317
Target Start/End: Original strand, 53352496 - 53352661
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||||||||||  ||||||||||||||||||        ||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  53352496 aatgatacatagacaccctttattttcatacacccttgtacacc--------taggaagagagaagaggagagaaaagagaaagtatgcttgtgcggggt 53352587  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcata 317  Q
    |||| |  | |||||||| |||||||||| ||||||||||  ||||||| || |||||| |||||||||||||||    
T  53352588 ccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcata 53352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 139 - 323
Target Start/End: Complemental strand, 3481826 - 3481652
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||||||||||| ||||||||||          || || ||| ||||||||| | | ||| ||||||||||||||||||||      
T  3481826 ggaaaatgttacatagacaccctttattctcatacaccct----------atgcactagaaagagagaagatgggaggaaagagaaagtgtgcttgtgtg 3481737  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    ||||||||||| | | |||||| |||||||||||||||| |||| ||||||||||| |||| | |||||||||||||| ||||||    
T  3481736 gggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactcat 3481652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 140 - 321
Target Start/End: Original strand, 48647645 - 48647826
Alignment:
Q  140 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 239  Q
    |||||||||||||| ||| | ||||||   ||||| | |||||||  | || || ||||||||||||| ||||||| ||||||||| ||||||||||| |    
T  48647645 gaaaatgttacatagacatcatttatttttatacatctttgtacattctatgcactaggaagagagaagaggagaggaaagagaaattgtgcttgtgcgg 48647744  T
Q  240 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
     ||||||||| |||||||| | |||||| ||||||||||||  |||||||||  | |||||||||| ||||| |||||||||    
T  48647745 agtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 28480186 - 28480368
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||||||    ||||| ||||||||| | ||| || ||||||||||||| ||||||  || ||||||||||| |||||      
T  28480186 ggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtg 28480285  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||| || | || ||||| ||||||||||| |||||||   |||||||| || |||||| ||||||||||| |||||||    
T  28480286 gggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 28481061 - 28481243
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||||||    ||||| ||||||||| | ||| || ||||||||||||| ||||||  || ||||||||||| |||||      
T  28481061 ggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtg 28481160  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||| || | || ||||| ||||||||||| |||||||   |||||||| || |||||| ||||||||||| |||||||    
T  28481161 gggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28481243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 28481936 - 28482118
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| |||||||||||    ||||| ||||||||| | ||| || ||||||||||||| ||||||  || ||||||||||| |||||      
T  28481936 ggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtg 28482035  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    |||||||| || | || ||||| ||||||||||| |||||||   |||||||| || |||||| ||||||||||| |||||||    
T  28482036 gggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28482118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 139 - 323
Target Start/End: Original strand, 18924413 - 18924597
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||| |  ||||||||||| |||||| |||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  18924413 ggaaaatgttacatagacaccttttaattgcatacacccttttacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 18924512  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    | || ||  | ||||| ||||| |||||||||||| | | || ||||||||||||| |||||| | | |||| ||||||||||||    
T  18924513 gagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactcat 18924597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 139 - 313
Target Start/End: Original strand, 29589658 - 29589831
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||| ||||||| ||||| |||| |  ||||||| |||||||||| |||  ||||||||||||||| || |||  ||||||||||||| ||||||      
T  29589658 ggaaaatattacatagacaccttttaattgcatacactcttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgtg 29589757  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtat 313  Q
    |||||||  ||||||| | ||| |||||||||||||||| || |||||||||| || |||||| ||| |||||||    
T  29589758 gggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 8343135 - 8343263
Alignment:
Q  193 attaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgc 292  Q
    ||||||||||||||| || |||  ||||||||||| | ||| ||| |||||||  ||||||| ||||| |||||| ||| ||||| ||||| ||||||||    
T  8343135 attaggaagagagaagagaagaagaaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgc 8343234  T
Q  293 catctaaggatgtctatgtatcataactc 321  Q
    || |||||||||| |||||||||||||||    
T  8343235 cacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 142 - 321
Target Start/End: Complemental strand, 47104723 - 47104544
Alignment:
Q  142 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 241  Q
    ||||||||| || ||||  ||||||| | ||||  || ||||||| ||| ||||| |||||||||| ||||||  |||||||||||||| |||||  |||    
T  47104723 aaatgttacgtagacactttttattctcgtacattctagtacacctcatgcattaagaagagagaagaggagatgaaagagaaagtgtgtttgtgtgggg 47104624  T
Q  242 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    || |     |||||||||| |||||||||||||||| | || |||||||| |||||||| |||||||| |||||| ||||    
T  47104623 tcaataaaaccacgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactc 47104544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 142 - 273
Target Start/End: Original strand, 56300086 - 56300217
Alignment:
Q  142 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 241  Q
    ||||||||| || |||  |||||||| ||||||  |||||||| | |||||||||| ||||||||| ||||||| |||||||||||||| |||||||||     
T  56300086 aaatgttacgtagacattctttattctcatacaatcttgtacatctcatacattagaaagagagaagaggagaggaaagagaaagtgtgtttgtgcagga 56300185  T
Q  242 tccacgtggccacgtgtcatatttttgtgtgg 273  Q
    | ||  || |||| ||||| ||||||||||||    
T  56300186 ttcatatgaccacatgtcagatttttgtgtgg 56300217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 55079685 - 55079814
Alignment:
Q  193 attaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg-tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattg 291  Q
    ||||||||||||||| || |||  ||||||||||||| ||||||  ||| ||||  ||||||| ||||| |||||||| ||||||| ||  |||||||||    
T  55079685 attaggaagagagaagagaagaagaaagagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggtgtattg 55079784  T
Q  292 ccatctaaggatgtctatgtatcataactc 321  Q
    ||| |||||| ||| |||||||||||||||    
T  55079785 ccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 139 - 321
Target Start/End: Original strand, 44536664 - 44536845
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||  |||| |  ||||||  ||||||||||| ||  ||||||||||||||| || |||  ||||||||||||| ||| ||      
T  44536664 ggaaaatgttacatagacacattttaattgcatacattcttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgtg 44536763  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||| |  || |||| ||||| |||||||||||| || | ||||||||||||||| ||||   ||| |||||||||||||||    
T  44536764 gggtctatatgaccacatgtcagatttttgtgtggatg-tcaagggtgtattgccacctaaaagtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 198 - 322
Target Start/End: Complemental strand, 29535499 - 29535376
Alignment:
Q  198 gaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatct 297  Q
    |||||||||||| ||||  |||||||||||||| |||||  || |||||||||||| ||| ||||||||||||||| |   ||  | ||||||| || ||    
T  29535499 gaagagagaataagagatgaaagagaaagtgtgtttgtgtgggatccacgtggccatgtg-catatttttgtgtggataccaagagatgtattgtcacct 29535401  T
Q  298 aaggatgtctatgtatcataactca 322  Q
    |||  ||||||||||||||||||||    
T  29535400 aagattgtctatgtatcataactca 29535376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 43487883 - 43487793
Alignment:
Q  141 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 236  Q
    ||||||| |||||||||||||||||| |  |||||||| |||||||||||||| ||||||| || |     |||| ||||||||||||||||||||    
T  43487883 aaaatgtcacataaacaccctttatttcagtacaccctggtacaccccatacactaggaagtgaaa-----agagcaaagagaaagtgtgcttgtg 43487793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 317
Target Start/End: Complemental strand, 18769260 - 18769113
Alignment:
Q  169 catacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttg 268  Q
    ||||||| ||||||||||| ||  | ||| |||||| || ||||||  ||||||||| |||  |||||  ||||  || || |||||||||| |||||||    
T  18769260 catacactcttgtacaccc-atgtactagaaagagaaaaaaggagatgaaagagaaaatgtatttgtgtggggtttacatgaccacgtgtcagatttttg 18769162  T
Q  269 tgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcata 317  Q
    ||||||||||| ||||||||| |  |  ||||||||| |||||||||||    
T  18769161 tgtgggtgttagagggtgtatgggtacataaggatgtttatgtatcata 18769113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 289
Target Start/End: Original strand, 18768972 - 18769115
Alignment:
Q  145 tgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtcc 244  Q
    ||||||||||||| | ||||  | |||||| |||||||||||| ||  |||||||||||| || | ||||  ||||||||| |||| |||||  || |      
T  18768972 tgttacataaacatcatttaccctcatacatccttgtacaccc-atgtattaggaagagaaaaaatgagatgaaagagaaaatgtgtttgtgtgggattt 18769070  T
Q  245 acgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtat 289  Q
    || || |||| ||||| ||||||||||||||||||  ||||||||    
T  18769071 acatgaccacatgtcagatttttgtgtgggtgttagggggtgtat 18769115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 1771366 - 1771315
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccat 190  Q
    |||||||||||||| ||||||||||||||| | || || |||||||||||||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccat 1771315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 33703245 - 33703307
Alignment:
Q  232 ttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccat 295  Q
    |||||| || |||| || ||||||||||| | ||||||||||||| ||||||||||||||||||    
T  33703245 ttgtgcgggatccaagttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccat 33703307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 120; Significance: 5e-61; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 140 - 323
Target Start/End: Original strand, 848 - 1031
Alignment:
Q  140 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 239  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||| |    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  240 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    | | |||||| | ||||||||  ||||||||||| |||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcat 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 120; Significance: 5e-61; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 140 - 323
Target Start/End: Original strand, 848 - 1031
Alignment:
Q  140 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 239  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||| |    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  240 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 323  Q
    | | |||||| | ||||||||  ||||||||||| |||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcat 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 4207 - 4029
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||| || |    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 4108  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||  | |||||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  4107 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 10031 - 10209
Alignment:
Q  143 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 242  Q
    |||| |||||| |||||| ||||| |||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| |  |||    
T  10031 aatgatacatagacacccattatttccatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacgcggt 10130  T
Q  243 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 321  Q
    ||||||| | |||||||| |||||| ||||| ||| ||||| |||||||||| |||| | |||||||||||||||||||    
T  10131 ccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactc 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 80; Significance: 4e-37; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 8781 - 8964
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 238  Q
    ||||||||||||||| ||||| |||||||  |||||||||||||||||||||| ||||||||||||||| | | ||| ||||||||| ||| ||||||      
T  8781 ggaaaatgttacatagacaccttttattcttatacacccttgtacaccccatatattaggaagagagaagatgggaggaaagagaaaatgtacttgtgtg 8880  T
Q  239 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 322  Q
    ||||||||||| | | |||||| |||||||||| | ||| |||  |||||||| ||  ||||||||||||| ||||||||||||    
T  8881 gggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcataactca 8964  T

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Target: scaffold0018 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 140 - 294
Target Start/End: Complemental strand, 152679 - 152525
Alignment:
Q  140 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 239  Q
    |||||||||||||| ||||| |||| |  |||||||||||||||| |||||  ||||| ||||||||| || |||  |||||||||||||  |||||| |    
T  152679 gaaaatgttacatagacaccttttaattgcatacacccttgtacatcccatgtattagaaagagagaagagaagaagaaagagaaagtgtatttgtgcgg 152580  T
Q  240 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    | ||||  || |||| ||||| |||||||||||||||| || |||||||||||||    
T  152579 gatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 152525  T

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Target: scaffold0316 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 17285 - 17199
Alignment:
Q  139 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaa 225  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||  |||   ||||||||||||| ||||||| |||||||||    
T  17285 ggaaaatgttacatagacaccctttatttccatacacctttgtacaccttatattctaggaagagagaagaggagaggaaagagaaa 17199  T

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Target: scaffold0316; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 212 - 323
Target Start/End: Complemental strand, 17163 - 17056
Alignment:
Q  212 agagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgt 311  Q
    |||| ||||||||| ||||||||||| ||||||| ||| |||| ||||| |||||||||||| |||  | || |||||||| | ||    |||||||||     
T  17163 agaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaacct----atgtctatga 17068  T
Q  312 atcataactcat 323  Q
    ||||||||||||    
T  17067 atcataactcat 17056  T

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Target: scaffold0119 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 798 - 850
Alignment:
Q  241 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 294  Q
    ||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  798 gtccaggttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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