View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13609_low_5 (Length: 209)

Name: NF13609_low_5
Description: NF13609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13609_low_5
NF13609_low_5
[»] chr4 (45 HSPs)
chr4 (96-178)||(26492110-26492192)
chr4 (96-180)||(51986145-51986229)
chr4 (96-176)||(38376378-38376458)
chr4 (96-179)||(26732328-26732411)
chr4 (96-178)||(23369218-23369300)
chr4 (100-176)||(43175091-43175167)
chr4 (100-178)||(44539841-44539919)
chr4 (96-173)||(24575742-24575819)
chr4 (103-176)||(53801647-53801720)
chr4 (100-176)||(39440591-39440667)
chr4 (100-178)||(37297156-37297233)
chr4 (96-178)||(10250401-10250483)
chr4 (99-177)||(36178012-36178090)
chr4 (96-177)||(5622561-5622642)
chr4 (103-176)||(15175656-15175729)
chr4 (100-177)||(26724859-26724936)
chr4 (106-179)||(29175338-29175411)
chr4 (103-180)||(37997364-37997441)
chr4 (96-181)||(46213073-46213158)
chr4 (100-179)||(11068795-11068874)
chr4 (106-178)||(2575676-2575748)
chr4 (106-178)||(34616674-34616746)
chr4 (106-178)||(39195170-39195242)
chr4 (100-179)||(31641450-31641529)
chr4 (103-178)||(38382431-38382506)
chr4 (103-178)||(39478547-39478622)
chr4 (103-178)||(42853687-42853762)
chr4 (103-178)||(47181951-47182026)
chr4 (103-178)||(48402083-48402158)
chr4 (100-177)||(27965094-27965169)
chr4 (104-176)||(38510661-38510731)
chr4 (106-177)||(27050973-27051044)
chr4 (103-178)||(56363931-56364006)
chr4 (114-176)||(5233558-5233620)
chr4 (107-180)||(19473840-19473913)
chr4 (100-136)||(29531534-29531570)
chr4 (100-168)||(38134460-38134528)
chr4 (103-175)||(56474656-56474728)
chr4 (107-170)||(45083086-45083149)
chr4 (102-136)||(42360265-42360299)
chr4 (119-176)||(26907970-26908027)
chr4 (120-177)||(39259080-39259137)
chr4 (107-176)||(39606086-39606155)
chr4 (142-178)||(2268405-2268441)
chr4 (100-136)||(46634207-46634243)
[»] chr8 (22 HSPs)
chr8 (96-178)||(27325861-27325943)
chr8 (100-170)||(36251433-36251503)
chr8 (100-173)||(32501087-32501160)
chr8 (100-177)||(34186714-34186791)
chr8 (100-176)||(4054174-4054250)
chr8 (98-178)||(12898815-12898895)
chr8 (96-180)||(37449309-37449393)
chr8 (100-170)||(5277393-5277463)
chr8 (100-176)||(42768311-42768387)
chr8 (96-176)||(22719543-22719623)
chr8 (103-177)||(11253429-11253503)
chr8 (107-173)||(36816507-36816573)
chr8 (100-176)||(7271957-7272033)
chr8 (96-180)||(43397884-43397968)
chr8 (103-177)||(29025370-29025444)
chr8 (107-175)||(36660339-36660407)
chr8 (107-179)||(37133747-37133819)
chr8 (106-177)||(24479336-24479407)
chr8 (99-136)||(31249452-31249489)
chr8 (100-177)||(34639640-34639717)
chr8 (113-177)||(10692551-10692615)
chr8 (107-136)||(10731660-10731689)
[»] chr3 (49 HSPs)
chr3 (96-177)||(52939754-52939835)
chr3 (96-176)||(19149093-19149173)
chr3 (96-179)||(27541387-27541470)
chr3 (100-179)||(38926735-38926814)
chr3 (100-180)||(5114185-5114265)
chr3 (96-172)||(5244332-5244408)
chr3 (100-176)||(42356972-42357048)
chr3 (96-176)||(44413283-44413363)
chr3 (96-176)||(47472432-47472512)
chr3 (96-178)||(44813239-44813321)
chr3 (100-176)||(32924169-32924245)
chr3 (96-180)||(44856056-44856140)
chr3 (97-176)||(16969454-16969533)
chr3 (96-179)||(37302649-37302732)
chr3 (103-178)||(52326129-52326204)
chr3 (100-177)||(52254025-52254102)
chr3 (100-176)||(13735837-13735913)
chr3 (103-175)||(24256660-24256732)
chr3 (96-176)||(36670902-36670982)
chr3 (103-173)||(42358529-42358599)
chr3 (100-178)||(46624014-46624092)
chr3 (103-176)||(26014922-26014995)
chr3 (100-177)||(41309224-41309301)
chr3 (100-176)||(7934081-7934157)
chr3 (100-179)||(33939345-33939424)
chr3 (107-177)||(55151604-55151674)
chr3 (103-179)||(31157562-31157638)
chr3 (100-180)||(35597269-35597349)
chr3 (103-178)||(44383299-44383374)
chr3 (96-178)||(35376967-35377049)
chr3 (106-176)||(37503635-37503705)
chr3 (96-153)||(20547901-20547958)
chr3 (100-176)||(288833-288909)
chr3 (103-179)||(13348019-13348095)
chr3 (103-178)||(21217622-21217697)
chr3 (103-178)||(37056943-37057018)
chr3 (96-173)||(8847213-8847289)
chr3 (103-175)||(23592568-23592640)
chr3 (97-180)||(7668072-7668154)
chr3 (96-182)||(25641465-25641551)
chr3 (106-180)||(44445407-44445481)
chr3 (107-172)||(11630642-11630707)
chr3 (103-175)||(23600703-23600775)
chr3 (104-177)||(39630504-39630577)
chr3 (100-136)||(41505598-41505634)
chr3 (96-128)||(45000166-45000198)
chr3 (96-136)||(50318317-50318357)
chr3 (122-179)||(42478086-42478145)
chr3 (96-176)||(42889088-42889168)
[»] chr5 (31 HSPs)
chr5 (96-179)||(18258678-18258761)
chr5 (103-178)||(1671652-1671727)
chr5 (96-178)||(26791130-26791212)
chr5 (96-176)||(14923176-14923256)
chr5 (96-176)||(28306020-28306100)
chr5 (100-176)||(33037627-33037703)
chr5 (100-178)||(36739055-36739133)
chr5 (103-176)||(41321365-41321438)
chr5 (96-175)||(13168625-13168704)
chr5 (97-175)||(1764328-1764406)
chr5 (96-177)||(5168286-5168367)
chr5 (100-176)||(7287077-7287153)
chr5 (100-180)||(28467337-28467417)
chr5 (103-173)||(2972434-2972504)
chr5 (96-177)||(14051202-14051283)
chr5 (103-186)||(13309993-13310076)
chr5 (106-184)||(39591793-39591871)
chr5 (106-184)||(39592185-39592263)
chr5 (103-184)||(8687001-8687082)
chr5 (103-176)||(15479579-15479652)
chr5 (96-168)||(7076464-7076536)
chr5 (103-178)||(17626096-17626171)
chr5 (110-177)||(35634722-35634789)
chr5 (106-178)||(1274471-1274542)
chr5 (107-179)||(7552852-7552924)
chr5 (108-175)||(42175034-42175101)
chr5 (103-179)||(22972227-22972303)
chr5 (107-174)||(39054701-39054768)
chr5 (96-136)||(1079880-1079920)
chr5 (114-178)||(4088565-4088629)
chr5 (100-136)||(35646490-35646526)
[»] chr2 (37 HSPs)
chr2 (96-175)||(9207693-9207772)
chr2 (96-178)||(22888703-22888785)
chr2 (96-179)||(9760121-9760204)
chr2 (96-179)||(18254094-18254177)
chr2 (96-178)||(1248789-1248871)
chr2 (100-178)||(43487486-43487564)
chr2 (96-173)||(6049236-6049313)
chr2 (96-179)||(42421783-42421866)
chr2 (96-180)||(9194344-9194428)
chr2 (99-179)||(9990797-9990877)
chr2 (103-181)||(32477442-32477520)
chr2 (107-176)||(3838768-3838837)
chr2 (100-173)||(42091393-42091468)
chr2 (103-178)||(2076679-2076754)
chr2 (96-175)||(34944979-34945058)
chr2 (100-181)||(19633389-19633471)
chr2 (100-181)||(19830290-19830372)
chr2 (100-185)||(9647239-9647324)
chr2 (106-179)||(41042367-41042440)
chr2 (96-176)||(7698274-7698354)
chr2 (107-178)||(8848583-8848654)
chr2 (104-179)||(21611540-21611615)
chr2 (103-178)||(25270468-25270543)
chr2 (106-177)||(37737858-37737929)
chr2 (106-177)||(41195697-41195768)
chr2 (96-136)||(17388531-17388571)
chr2 (107-177)||(27490617-27490687)
chr2 (106-178)||(3097747-3097819)
chr2 (103-175)||(41056636-41056708)
chr2 (107-178)||(13333056-13333127)
chr2 (100-136)||(6511358-6511394)
chr2 (96-136)||(44287370-44287410)
chr2 (121-176)||(42434247-42434302)
chr2 (115-177)||(18846733-18846795)
chr2 (109-175)||(29349622-29349688)
chr2 (96-136)||(22416316-22416356)
chr2 (142-178)||(22416350-22416386)
[»] chr1 (47 HSPs)
chr1 (96-178)||(27464943-27465025)
chr1 (100-173)||(45333818-45333891)
chr1 (100-176)||(26469466-26469542)
chr1 (96-176)||(48470742-48470822)
chr1 (100-179)||(649876-649955)
chr1 (96-178)||(31088284-31088366)
chr1 (96-178)||(45121367-45121448)
chr1 (100-176)||(44914459-44914536)
chr1 (96-176)||(50726136-50726216)
chr1 (96-179)||(23645514-23645597)
chr1 (100-179)||(37274918-37274997)
chr1 (106-180)||(19055643-19055717)
chr1 (100-177)||(33100915-33100992)
chr1 (100-176)||(8350087-8350162)
chr1 (100-172)||(35369807-35369879)
chr1 (103-176)||(44519039-44519112)
chr1 (101-177)||(30735180-30735256)
chr1 (96-176)||(37619647-37619727)
chr1 (96-180)||(45640405-45640488)
chr1 (101-176)||(15469945-15470019)
chr1 (103-178)||(21401508-21401583)
chr1 (103-170)||(50932414-50932481)
chr1 (100-170)||(3851265-3851335)
chr1 (106-176)||(3981914-3981984)
chr1 (100-181)||(37685436-37685517)
chr1 (100-181)||(37700001-37700082)
chr1 (96-172)||(40861154-40861230)
chr1 (106-186)||(43775319-43775399)
chr1 (96-179)||(18434898-18434981)
chr1 (103-178)||(46907305-46907380)
chr1 (103-177)||(52576188-52576263)
chr1 (100-181)||(2571742-2571824)
chr1 (107-181)||(50149060-50149134)
chr1 (96-175)||(49065253-49065332)
chr1 (96-133)||(3159479-3159516)
chr1 (103-176)||(19947632-19947705)
chr1 (114-178)||(30467419-30467483)
chr1 (97-176)||(48103250-48103330)
chr1 (106-177)||(31827064-31827135)
chr1 (96-146)||(4776859-4776909)
chr1 (142-180)||(41677220-41677258)
chr1 (103-136)||(6693267-6693300)
chr1 (99-136)||(12657329-12657366)
chr1 (103-180)||(18512227-18512304)
chr1 (107-176)||(26207955-26208024)
chr1 (114-175)||(30570645-30570706)
chr1 (122-182)||(50333337-50333397)
[»] scaffold0199 (1 HSPs)
scaffold0199 (100-180)||(8775-8855)
[»] chr7 (20 HSPs)
chr7 (96-176)||(38956506-38956586)
chr7 (100-175)||(32529745-32529820)
chr7 (96-176)||(44895460-44895540)
chr7 (96-179)||(3937008-3937091)
chr7 (100-177)||(24614203-24614280)
chr7 (96-177)||(40112841-40112922)
chr7 (96-177)||(43025443-43025524)
chr7 (96-176)||(22918057-22918137)
chr7 (104-179)||(43942743-43942818)
chr7 (103-177)||(41189428-41189504)
chr7 (100-179)||(25192802-25192881)
chr7 (96-176)||(41989628-41989710)
chr7 (103-178)||(46022153-46022228)
chr7 (103-176)||(40417884-40417957)
chr7 (107-176)||(45851095-45851164)
chr7 (103-178)||(7701654-7701729)
chr7 (106-177)||(31445431-31445502)
chr7 (96-136)||(38073323-38073363)
chr7 (96-136)||(38861199-38861239)
chr7 (96-176)||(46578023-46578103)
[»] chr6 (19 HSPs)
chr6 (96-176)||(552896-552976)
chr6 (96-176)||(14818035-14818115)
chr6 (100-179)||(33430247-33430326)
chr6 (101-179)||(15974716-15974794)
chr6 (103-177)||(32316815-32316889)
chr6 (96-177)||(1156823-1156904)
chr6 (103-175)||(11612298-11612370)
chr6 (103-176)||(13689882-13689955)
chr6 (103-171)||(18737460-18737528)
chr6 (103-179)||(26595459-26595535)
chr6 (100-176)||(31077901-31077977)
chr6 (103-178)||(16199560-16199635)
chr6 (96-179)||(34047490-34047573)
chr6 (105-178)||(4820479-4820552)
chr6 (103-176)||(5694039-5694112)
chr6 (107-176)||(277105-277174)
chr6 (107-176)||(22079451-22079520)
chr6 (106-179)||(24900887-24900960)
chr6 (100-128)||(5080503-5080531)
[»] scaffold0056 (1 HSPs)
scaffold0056 (96-179)||(76504-76587)
[»] scaffold0098 (1 HSPs)
scaffold0098 (100-176)||(49402-49478)
[»] scaffold0519 (1 HSPs)
scaffold0519 (103-177)||(11892-11966)
[»] scaffold0067 (1 HSPs)
scaffold0067 (100-136)||(35630-35666)
[»] scaffold0148 (1 HSPs)
scaffold0148 (120-179)||(20786-20845)


Alignment Details
Target: chr4 (Bit Score: 71; Significance: 2e-32; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 26492110 - 26492192
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  26492110 gtgccactacttcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaactctt 26492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 51986145 - 51986229
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||||    
T  51986145 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctttt 51986229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 38376458 - 38376378
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  38376458 gtgccactatctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactc 38376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 26732328 - 26732411
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  26732328 gtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 26732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 23369300 - 23369218
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||||||||||||||||||| |||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  23369300 gtgccactacctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 23369218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 43175091 - 43175167
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||| |||||| |||||||||||||||||||||    
T  43175091 cactacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 44539841 - 44539919
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||||  ||||||||||||||||||||||    
T  44539841 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 44539919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 24575819 - 24575742
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 173  Q
    |||||| ||||||||||||||| |||||||||| ||||||| ||| |||||| |||||||||||||||||||||||||    
T  24575819 gtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 53801720 - 53801647
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  53801720 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 53801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 39440591 - 39440667
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||| ||||||  ||||||||||||||||||||    
T  39440591 cactacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 37297156 - 37297233
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    ||||||||||||||||| ||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  37297156 cactacctcatttcctt-gtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaactctt 37297233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 10250483 - 10250401
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||||| ||||||||||||||| ||||||| ||| |||||  |||||| |||||||||||||||||| ||||    
T  10250483 gtgccactacttcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacacaattctt 10250401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 36178012 - 36178090
Alignment:
Q  99 ccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||||| |||||||||  ||||||| ||| || ||| ||||||| |||||||||||||||||||||    
T  36178012 ccactacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactct 36178090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 5622561 - 5622642
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||| |||||||||||||||||||||||||||  || |||| ||| |||| | |||||||||| ||||||||||||||||||    
T  5622561 gtgcaactacctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaactct 5622642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 15175656 - 15175729
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||||||||||| |||| || ||| |||||| |||||| ||||||||||||| |||||||    
T  15175656 tacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataatacaactc 15175729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 26724936 - 26724859
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||||||||||||||  |||| || ||| || ||| |||||| ||||||||||||||||||||||    
T  26724936 cactacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaactct 26724859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 29175338 - 29175411
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||| ||||||||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||||    
T  29175338 ctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttt 29175411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 37997364 - 37997441
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    |||||||||| ||||||||||||||| |||| || |||||| ||| ||||||||||||||||||| |||| |||||||    
T  37997364 tacctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaatagcacagctctttt 37997441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 46213073 - 46213158
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 181  Q
    |||| |||||||||||||||||||||||||||| |||| || ||| || ||| |||||| ||| ||||||||||||||||| ||||    
T  46213073 gtgcaactacctcatttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaataacacaactcattta 46213158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 11068795 - 11068874
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||| |||||||||||||||||||||||| ||| ||| ||| |||||| ||||||  ||||||||||||||||| |||||    
T  11068795 cactgcctcatttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacacaattcttt 11068874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 2575748 - 2575676
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    ||||||| |||||||||| |||  ||||||| ||| |||||| ||| ||||||||||||||||||||||||||    
T  2575748 ctcattttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaactctt 2575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 34616674 - 34616746
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    ||||||| |||| |||||||||| ||||| | ||| |||||| ||| ||||||||||||||||||||||||||    
T  34616674 ctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactctt 34616746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 39195170 - 39195242
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    ||||||| |||||||||| ||||||| |||| ||  |||||| ||| ||||||||||||||||||||||||||    
T  39195170 ctcattttctttgtaaaactttgattatcacaaatgttgtcatataaatagatgttcaaataacacaactctt 39195242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 31641529 - 31641450
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||||| ||||||||| |||||||||| ||||||| ||| || |||  |||||  |||||||||||||||||||||||    
T  31641529 cactaccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactcttt 31641450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 38382431 - 38382506
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  38382431 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 38382506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 39478547 - 39478622
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| |||||| ||  ||||||||||||    
T  39478547 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcatatatatggatgtttaataaacacaactctt 39478622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 42853687 - 42853762
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||||||||| | ||||||||||   | || |||||||||||||||||||||||    
T  42853687 tacctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaactctt 42853762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 47181951 - 47182026
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  47181951 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 47182026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 48402158 - 48402083
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  48402158 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 48402083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 27965094 - 27965169
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||| ||  ||||||||| |||||||  || |||||| |||||| ||||||||||||||||||||||    
T  27965094 cactacctcatttccatt--aaaattttggttgtcacagaagttgtcacatatatggatgttcaaataacacaactct 27965169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 38510731 - 38510661
Alignment:
Q  104 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||  ||||||| ||||| ||||||||||||||    
T  38510731 accttatttcctttataaaattttgattgtcacaaaaattatc--atatataaatgttgaaataacacaactc 38510661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 27051044 - 27050973
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||| ||||||||||||||| ||||||| ||| |||||| || |||  |||||||||||||||| ||||    
T  27051044 ctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacacatctct 27050973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 56364006 - 56363931
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||| ||||| | ||| ||||||  || || |||||||||||||||||||||||    
T  56364006 tacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactctt 56363931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 5233620 - 5233558
Alignment:
Q  114 ctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||  | ||| |||| | ||| ||||||||||||||||||||||||    
T  5233620 ctttgtaaaattttgattgtttcaaaagttgttacataaatagatgttcaaataacacaactc 5233558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 19473913 - 19473840
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    |||||| ||||||||||||||||||||| | ||| |||||| ||| ||  || |||||||||||||| ||||||    
T  19473913 tcattttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaaatctttt 19473840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 29531570 - 29531534
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcac 136  Q
    ||||||||||||||||||||||||||||| |||||||    
T  29531570 cactacctcatttcctttgtaaaattttggttgtcac 29531534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 38134460 - 38134528
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataa 168  Q
    |||| |||||||||||||||||||||||| || |||| ||| |||||| || |||  ||||||||||||    
T  38134460 cactgcctcatttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 56474728 - 56474656
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    |||||||||| ||||||||| ||||| ||||| | |||||||| |  |  |||||||||||||||||||||||    
T  56474728 tacctcattttctttgtaaagttttggttgtctcaaaaattgttatgtgaatagatgttcaaataacacaact 56474656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 45083086 - 45083149
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 170  Q
    |||||| |||| ||||||||||||||| |  ||| |||||| |||||| |||||||||||||||    
T  45083086 tcattttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 136
Target Start/End: Original strand, 42360265 - 42360299
Alignment:
Q  102 ctacctcatttcctttgtaaaattttgattgtcac 136  Q
    ||||||||||||||||||||||||||| |||||||    
T  42360265 ctacctcatttcctttgtaaaattttggttgtcac 42360299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 26908027 - 26907970
Alignment:
Q  119 taaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||| |||||||  |||||| ||| |||||| ||| |||||||||||||||||    
T  26908027 taaaattttaattgtcataaaaattatcacatatatggatattcaaataacacaactc 26907970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 39259080 - 39259137
Alignment:
Q  120 aaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||| |||||||| ||||||||||  || || ||| ||||||||||||||||||    
T  39259080 aaaattttaattgtcacaaaaattgtcatctaaatggatattcaaataacacaactct 39259137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 39606086 - 39606155
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||| |||||||||| || ||   ||| |||||| ||||||| |||||||||||| |||||||    
T  39606086 tcatttcctttataaaattttggttatcgtaaaagttgtcacatatataaatgttcaaataatacaactc 39606155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 2268441 - 2268405
Alignment:
Q  142 ttgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||| |||||| |||||||||||||||||||||||    
T  2268441 ttgtcacatatatggatgttcaaataacacaactctt 2268405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 46634207 - 46634243
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcac 136  Q
    ||||||||||||||||||||||||||||  |||||||    
T  46634207 cactacctcatttcctttgtaaaattttagttgtcac 46634243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 27325861 - 27325943
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||||||||||    
T  27325861 gtgccactacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaactctt 27325943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 36251433 - 36251503
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||| |||||| |||||||||||||||    
T  36251433 cactacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 32501160 - 32501087
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 173  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||| ||||||||||||||||||    
T  32501160 cactacctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacacaa 32501087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 34186714 - 34186791
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||| || ||| ||||||||||||||||||||||    
T  34186714 cactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactct 34186791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 4054250 - 4054174
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||| |||||||| ||||||||||||| ||| |||||| ||||||| ||||||||||||||||||||    
T  4054250 cactacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaactc 4054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 12898895 - 12898815
Alignment:
Q  98 gccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||| |||||||    
T  12898895 gccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacataactctt 12898815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 37449393 - 37449309
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||| || ||| |||||| ||| |||||||||||||||||||||    
T  37449393 gtgctactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaactctttt 37449309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 5277463 - 5277393
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 170  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||| || ||| |||||||||||||||    
T  5277463 cactacctcatttcctttgtaaaattttgattgtcacataaattgtcacatgtatggatgttcaaataaca 5277393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 42768311 - 42768387
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||| |||||||||||||||||||||||  ||||||| |||||| ||| |||||| |||||||||||||||||||||    
T  42768311 cactgcctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 42768387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 22719543 - 22719623
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||| |||||||||||| ||||||||||||||| || |||| ||| |||||| |||||| | |||||||||||||||||||    
T  22719543 gtgcaactacctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaactc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 11253503 - 11253429
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||||| ||||||||||||||| | ||||| ||| |||||| || ||||||||||||||||| ||||||||    
T  11253503 tacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11253429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 36816573 - 36816507
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 173  Q
    |||||| ||||| |||||||||||| |||| ||| |||||| |||||||||||||||||||||||||    
T  36816573 tcattttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 7271957 - 7272033
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||| |||||||| |||| ||||||||||||||||| ||| |||||| || ||| |||||||| ||||||||||||    
T  7271957 cactatctcatttcttttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcatataacacaactc 7272033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 43397884 - 43397968
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    ||||||||| ||||||| ||||||||||||||| ||||||| |||  ||||| || ||| ||||||||| ||||||| |||||||    
T  43397884 gtgccactatctcattttctttgtaaaattttggttgtcacaaaagctgtcacatgtatggatgttcaattaacacatctctttt 43397968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 29025370 - 29025444
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||||| ||||||||||||||| ||||| | ||| |||||| ||| || |||||| |||||||||||||||    
T  29025370 tacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaactct 29025444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 36660407 - 36660339
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    |||||| |||| |||||||||||||||||| ||| || ||| || ||| ||||||||||||||||||||    
T  36660407 tcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacacaact 36660339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 37133819 - 37133747
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||| ||||||||||||||| ||||||| ||| ||||||  || || |||||| |||||||||||||||||    
T  37133819 tcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaactcttt 37133747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 24479336 - 24479407
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||||||||  ||||||| ||| || ||| ||||||  ||| |||||||||||||||||    
T  24479336 ctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactct 24479407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 31249489 - 31249452
Alignment:
Q  99 ccactacctcatttcctttgtaaaattttgattgtcac 136  Q
    |||||||||||||||||||||||||||||| |||||||    
T  31249489 ccactacctcatttcctttgtaaaattttggttgtcac 31249452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 34639640 - 34639717
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||||||||  ||||||||||||||||| || | |||||| |||  || || ||||||||||||||| ||||||    
T  34639640 cactacctcattttatttgtaaaattttgattctctcaaaaattatcatgtaaatggatgttcaaataacataactct 34639717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 10692551 - 10692615
Alignment:
Q  113 cctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||||||||||||||||||   || ||| || |||||| ||||||||||||| ||||||||    
T  10692551 cctttgtaaaattttgattgtcagagaagttgacacatatatggatgttcaaataatacaactct 10692615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 136
Target Start/End: Original strand, 10731660 - 10731689
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcac 136  Q
    ||||||||||||||||||||||||||||||    
T  10731660 tcatttcctttgtaaaattttgattgtcac 10731689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 2e-29; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 52939754 - 52939835
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  52939754 gtgccactacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactct 52939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 19149093 - 19149173
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  19149093 gtgccactaactcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 27541470 - 27541387
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  27541470 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 27541387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 38926735 - 38926814
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  38926735 cactaccttatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaactcttt 38926814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 5114185 - 5114265
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||||    
T  5114185 cactacctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactctttt 5114265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 5244332 - 5244408
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 172  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||    
T  5244332 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacaca 5244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 42357048 - 42356972
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||||||||||||||||||||    
T  42357048 cactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 44413363 - 44413283
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  44413363 gtgccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 47472432 - 47472512
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||||||||||| |||||    
T  47472432 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacataactc 47472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 44813239 - 44813321
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||| |||||||||||    
T  44813239 gtgccactacctaatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaactctt 44813321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 32924245 - 32924169
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  32924245 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 44856056 - 44856140
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    ||||||||||||||||||||||||||||||||| ||||||   || |||||| |||||| |||||||||||||||||||||||||    
T  44856056 gtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactctttt 44856140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 16969533 - 16969454
Alignment:
Q  97 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||||||||||||||||  ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  16969533 tgccactacctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 37302649 - 37302732
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| |||||| || ||| ||||||||||||| ||||||||||    
T  37302649 gtgccactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactcttt 37302732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 52326129 - 52326204
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||||||||||||||||||||||||||  ||| |||||| |||||| |||||||||||||||||||||||    
T  52326129 tacctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaactctt 52326204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 52254102 - 52254025
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||| |||||| ||||||||||| ||||||||||    
T  52254102 cactacctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaactct 52254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 13735837 - 13735913
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||| ||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  13735837 cactacctcatttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 24256732 - 24256660
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||| |||||||||| ||||||||||||||||    
T  24256732 tacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacacaact 24256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 36670982 - 36670902
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||| || ||| |||||| |||||||||||||||||||||    
T  36670982 gtgccactacctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 36670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 42358599 - 42358529
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 173  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||    
T  42358599 tacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 46624014 - 46624092
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    ||||||||||||| ||||||||||||||||||||||| ||| || ||| || ||| |||||||||||||||||||||||    
T  46624014 cactacctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactctt 46624092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 26014922 - 26014995
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||||||||||| ||||||| ||| |||||| || |||||||||| ||||||||||||||    
T  26014922 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaactc 26014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 41309224 - 41309301
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||| ||||||||||||||||||||||| ||| || ||  |||||| ||||||||||||||||||||||    
T  41309224 cactacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaactct 41309301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 7934081 - 7934157
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||| ||||| ||||||||||||||||  ||||||| |||||||||| |||||| |||||||||||||||||||||    
T  7934081 cactatctcatatcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 33939345 - 33939424
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||| |||||||||||| | ||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  33939345 cactacttcatttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 33939424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 55151674 - 55151604
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||||||| ||||| || ||| |||||| ||||||| |||||||||||||||||||||    
T  55151674 tcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactct 55151604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 31157638 - 31157562
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||| |||||||||||||||||||||| |||||  || || ||| |||||| ||||||||||||||||||||||||    
T  31157638 tacctaatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaactcttt 31157562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 35597269 - 35597349
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    ||||||||| ||||||||||||||||||| ||||||| ||| |||||| ||||||  || |||||||||||||||| ||||    
T  35597269 cactacctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaactttttt 35597349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 44383299 - 44383374
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||||||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  44383299 tacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 44383374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 35377049 - 35376967
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||| ||| |||||| ||||||||||||||| ||||||| ||| ||||||  || || |||||||||||||||||||||||    
T  35377049 gtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactctt 35376967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 37503705 - 37503635
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||| ||||||||| ||||||| ||| || ||| ||||||| ||||||||||||||||||||    
T  37503705 ctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 37503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 20547958 - 20547901
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatata 153  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||    
T  20547958 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatata 20547901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 288833 - 288909
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||| |||||||| ||||||||||||||||||| || | | |||||| |||||| ||| |||||||||||||||||    
T  288833 cactatctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 13348095 - 13348019
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||||||| ||||||||||||||| ||||| | ||| |||||| ||| || ||||||||||||||| ||||||||    
T  13348095 tacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactcttt 13348019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 21217622 - 21217697
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  21217622 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 21217697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 37057018 - 37056943
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| ||||||||||| ||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  37057018 tacctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 37056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 8847213 - 8847289
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 173  Q
    |||||| ||||||||||  ||||||||||||||||| |||| ||| |||| | |||||| ||||||||||||||||||    
T  8847213 gtgccaatacctcattttatttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaataacacaa 8847289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 23592568 - 23592640
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || ||||||||||||||||||||    
T  23592568 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 7668154 - 7668072
Alignment:
Q  97 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    |||||||| || |||||||| | ||||||||| ||||||| ||| |||||| || ||| |||||||||||||||||| ||||||    
T  7668154 tgccactatcttatttcctt-gcaaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaattctttt 7668072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 25641551 - 25641465
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaa 182  Q
    |||||| ||||| |||| || ||||||| |||| ||||| | ||| |||||| ||| || ||||||||||||| |||||||||||||    
T  25641551 gtgccaataccttattttctatgtaaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataatacaactcttttaa 25641465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 180
Target Start/End: Original strand, 44445407 - 44445481
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    ||||||| |||| |||||||||| ||||||  ||| |||| | |||||| ||||||||||||||| |||||||||    
T  44445407 ctcattttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaataacataactctttt 44445481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 11630707 - 11630642
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 172  Q
    |||||| |||||||||||||| |||||| | |||||||||| ||| ||  ||||||||||||||||    
T  11630707 tcattttctttgtaaaattttaattgtctcaaaaattgtcatataaatgaatgttcaaataacaca 11630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 23600703 - 23600775
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    ||| |||||| |||| |||||||||| ||||| | ||| |||||| ||| || ||||||||||||||||||||    
T  23600703 tacntcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 39630577 - 39630504
Alignment:
Q  104 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||| |||| |||||||||||||||||||||   |||||| | | ||| |||||||||||||||||| ||||||    
T  39630577 acctaattttctttgtaaaattttgattgtcttaaaaattattatataaatagatgttcaaataacaaaactct 39630504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 41505598 - 41505634
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcac 136  Q
    ||||||||||||||||||||||||||||| |||||||    
T  41505598 cactacctcatttcctttgtaaaattttggttgtcac 41505634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 45000166 - 45000198
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttg 128  Q
    |||||||||||||||||||||||||||||||||    
T  45000166 gtgccactacctcatttcctttgtaaaattttg 45000198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 50318357 - 50318317
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcac 136  Q
    ||||||||| ||||||||||||||||||||||| |||||||    
T  50318357 gtgccactatctcatttcctttgtaaaattttggttgtcac 50318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 42478086 - 42478145
Alignment:
Q  122 aattttgattgtcacgaaaattgtcagatatata--gatgttcaaataacacaactcttt 179  Q
    ||||||| ||||||| ||| || ||| |||||||  ||||||||||||||||||||||||    
T  42478086 aattttggttgtcacaaaagttatcatatatatatggatgttcaaataacacaactcttt 42478145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 42889088 - 42889168
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||| || ||||||| ||||||||||||||| || |  | ||| ||||||  || ||||||||| ||||||||||||||    
T  42889088 gtgccaataactcattttctttgtaaaattttggttatatcaaaagttgtcatctaaatagatgtttaaataacacaactc 42889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 18258761 - 18258678
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  18258761 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 18258678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 1671652 - 1671727
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  1671652 tacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 1671727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 26791212 - 26791130
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  26791212 gtgccactaactcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 26791130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 14923176 - 14923256
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||| |||||||||||||| || |||||||| |||||| |||||| |||||||||||||||||||||    
T  14923176 gtgccactacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaactc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 28306100 - 28306020
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  28306100 gtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 28306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 33037627 - 33037703
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  33037627 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 36739055 - 36739133
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||||||| |||||||||||||| ||||||| |||||| ||| |||||| |||||||||||||||||||||||    
T  36739055 cactacctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactctt 36739133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 41321365 - 41321438
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| |||||| ||| |||||||||||||||||    
T  41321365 tacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 13168625 - 13168704
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||  ||||| |||||||||||||    
T  13168625 gtgccactatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaact 13168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 1764328 - 1764406
Alignment:
Q  97 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||    
T  1764328 tgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 5168286 - 5168367
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||| ||||||||||||||  ||||||| ||| |||||| ||||||  |||||||||||||||||||||    
T  5168286 gtgccactacctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaactct 5168367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 7287153 - 7287077
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||| ||||||||||||||| ||||||| ||| |||||| ||||||  ||||||||||||||||||||    
T  7287153 cactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 7287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 180
Target Start/End: Complemental strand, 28467417 - 28467337
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    |||| ||||||||||||| |||||||||| ||||||| |||||||||| ||||||  ||||||| ||||||||||||||||    
T  28467417 cactgcctcatttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactctttt 28467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 2972434 - 2972504
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 173  Q
    |||||||||||||| || |||||||||||||||| ||| |||||| ||||||| |||||||||||||||||    
T  2972434 tacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 14051283 - 14051202
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||| || ||| |||||| ||||||  ||||||||||||||    
T  14051283 gtgccactacctcattttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtttgaataacacaactct 14051202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 186
Target Start/End: Original strand, 13309993 - 13310076
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaataa 186  Q
    |||||||||| |||||||||| |||||||||| | ||||||||||  || || |||||||||||||||||| ||||| ||||||    
T  13309993 tacctcattttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacacaattctttgaaataa 13310076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 39591793 - 39591871
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaat 184  Q
    ||||||| |||||||||| |||| ||||||| ||  |||||| ||| ||||||||||||||||||||||||||| ||||    
T  39591793 ctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactctttgaaat 39591871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 39592185 - 39592263
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaat 184  Q
    ||||||| |||||||||| |||| ||||||| ||  |||||| ||| ||||||||||||||||||||||||||| ||||    
T  39592185 ctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactctttgaaat 39592263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 184
Target Start/End: Original strand, 8687001 - 8687082
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaat 184  Q
    |||||||||| |||||||||||||||||||| |  ||| |||||| ||||||  ||||||||||||||| |||||| |||||    
T  8687001 tacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacactactcttgtaaat 8687082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 15479579 - 15479652
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||  ||||||||||||| |||||||| ||| |||||| || ||| |||||||||||||||||||||    
T  15479579 tacctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaactc 15479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 7076536 - 7076464
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataa 168  Q
    |||||| ||| |||||||||||||||||||||| ||||||| ||| |||||| ||||||  ||||||||||||    
T  7076536 gtgccattacttcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 17626096 - 17626171
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  17626096 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 17626171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 35634789 - 35634722
Alignment:
Q  110 tttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||||| || |||  ||| |||||| |||||| ||||||||||||||||||||||    
T  35634789 tttcctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaactct 35634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 1274471 - 1274542
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||| |||||||||||||||| ||| ||  ||| |||||| |||||| |||||||||||||||||||||||    
T  1274471 ctcattccctttgtaaaattttggttg-cataaaagttgtcacatatatggatgttcaaataacacaactctt 1274542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 7552924 - 7552852
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||| ||||| ||||||||| ||||||| ||| ||||||  || || ||||||||||||||||||||||||    
T  7552924 tcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactcttt 7552852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 42175034 - 42175101
Alignment:
Q  108 catttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    |||||||||| ||||||||||| |||||  ||| ||| || |||||| ||||||||||||||||||||    
T  42175034 catttcctttataaaattttgactgtcataaaagttgacacatatatcgatgttcaaataacacaact 42175101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 22972227 - 22972303
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||| |||| ||||||||||||||  ||||| | ||| |||| | ||| || ||||||||||||||||||||||||    
T  22972227 taccttattttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaactcttt 22972303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 39054701 - 39054768
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaac 174  Q
    |||||| ||||| |||||||||||| |||| ||| ||||||  || || |||||||||||||||||||    
T  39054701 tcattttctttgcaaaattttgattatcacaaaagttgtcatctaaatggatgttcaaataacacaac 39054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 1079920 - 1079880
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcac 136  Q
    |||||| |||||||||| |||||||||||||| ||||||||    
T  1079920 gtgccaatacctcattttctttgtaaaattttaattgtcac 1079880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 4088565 - 4088629
Alignment:
Q  114 ctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| | ||||||||||  |  |||||| | | ||||||||||||||||||||||||||    
T  4088565 ctttgtaaaaatatgattgtcacataggttgtcaaaaaaatagatgttcaaataacacaactctt 4088629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 35646490 - 35646526
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcac 136  Q
    ||||||||||||||||||||||||||||  |||||||    
T  35646490 cactacctcatttcctttgtaaaattttagttgtcac 35646526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 9207693 - 9207772
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||||    
T  9207693 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaact 9207772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 22888785 - 22888703
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  22888785 gtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 22888703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 9760121 - 9760204
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||||||||||||||| | ||||||||| ||||||| ||| |||||| |||||||||||||||||||||||||||||||    
T  9760121 gtgccactacctcatttccttggaaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaactcttt 9760204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 18254177 - 18254094
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||||    
T  18254177 gtgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 18254094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 1248789 - 1248871
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||||||||||||||||||||||||| ||| |||| ||| |||||| |||||| |||||||||||||||||||||||    
T  1248789 gtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaactctt 1248871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 43487486 - 43487564
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||| |||||| |||||||||||||||||||||||    
T  43487486 cactacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactctt 43487564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 6049313 - 6049236
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 173  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||    
T  6049313 gtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 42421866 - 42421783
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||||    
T  42421866 gtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttt 42421783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 9194344 - 9194428
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    |||||| ||||||||||| |||||||||||||| ||||||| |||||||| | ||||||  ||||||||||||||||||||||||    
T  9194344 gtgccattacctcatttcttttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaactctttt 9194428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 9990797 - 9990877
Alignment:
Q  99 ccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||| ||||||||||||||||||||| |||||||| ||| || ||| |||||| ||||||||||||||||||||||||    
T  9990797 ccactacttcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaactcttt 9990877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 32477442 - 32477520
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 181  Q
    ||||||||||||||||| |||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||||||    
T  32477442 tacctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctttta 32477520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 3838837 - 3838768
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||| ||| |||| ||| |||||| ||||||||||||||||||||||||||||    
T  3838837 tcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 42091468 - 42091393
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgt--cagatatatagatgttcaaataacacaa 173  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||  || |||||||||||||||||||||||||    
T  42091468 cactacctcgtttcctttgtaaaattttggttgtcacaaaaattgtcacatatatatagatgttcaaataacacaa 42091393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 2076679 - 2076754
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| || ||| |||||||||||||||||||||||    
T  2076679 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactctt 2076754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 34945058 - 34944979
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||  || ||||| ||||||||||    
T  34945058 gtgccactacctcatttcttttgtaaaattttggttgtcacgaaagttgtcacatatatgaatattcaattaacacaact 34944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 19633389 - 19633471
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtc-agatatatagatgttcaaataacacaactctttta 181  Q
    ||||||||||||||||||||||||||||||||||||| ||| || || | ||||||| |||||||||||| ||||||| ||||    
T  19633389 cactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactcgttta 19633471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 19830290 - 19830372
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtc-agatatatagatgttcaaataacacaactctttta 181  Q
    ||||||||||||||||||||||||||||||||||||| ||| || || | ||||||| |||||||||||| ||||||| ||||    
T  19830290 cactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactcgttta 19830372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 9647239 - 9647324
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaata 185  Q
    |||||| |||||||||||||||||||||| ||||||| ||| || ||  ||||||  ||||||||||||||||||||||| |||||    
T  9647239 cactacttcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaactctttaaaata 9647324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 41042367 - 41042440
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||||||||| |||||||||| ||||||  |||||||||| |||||| ||||||||||||||| ||||||||    
T  41042367 ctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaactcttt 41042440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 7698274 - 7698354
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||| ||||||||||||||||||| ||| |||| ||| || ||| || ||||||||||| |||||||||||||    
T  7698274 gtgccactacctaatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttctaataacacaactc 7698354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 8848654 - 8848583
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||| ||||| ||||||||||||||||| |||||| |||  || ||||||||||||||||||||||||||    
T  8848654 tcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaactctt 8848583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 21611615 - 21611540
Alignment:
Q  104 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||| ||||| |||||||||||||| ||||||  ||| |||||| |||||| ||||||||||||||||||||||||    
T  21611615 accttatttcatttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaactcttt 21611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 25270543 - 25270468
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||| ||||| ||||| |||||| ||| || |||||||||||||||||||||||    
T  25270543 tacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactctt 25270468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 37737929 - 37737858
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||| ||||| ||||||| ||| |||||| |||||| || |||||||||||||||||||    
T  37737929 ctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaactct 37737858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 41195697 - 41195768
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||||||||||||||||| ||||||| ||| |||| | ||||||  |||||||||||||||||||||    
T  41195697 ctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaactct 41195768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 17388571 - 17388531
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcac 136  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17388571 gtgccactacctcatttcctttgtaaaattttgattgtcac 17388531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 27490687 - 27490617
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||| ||||||||||||||||||||||| ||| ||||||   | || ||||||||||||||||||||||    
T  27490687 tcattttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactct 27490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 3097819 - 3097747
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    ||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  3097819 ctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 3097747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 41056708 - 41056636
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || ||||||||||||||||||||    
T  41056708 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 41056636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 13333127 - 13333056
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  13333127 tcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactctt 13333056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 6511358 - 6511394
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcac 136  Q
    |||||||||||||||||| ||||||||||||||||||    
T  6511358 cactacctcatttcctttataaaattttgattgtcac 6511394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 44287410 - 44287370
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcac 136  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  44287410 gtgccacaacctcatttcctttgtaaaattttggttgtcac 44287370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 42434247 - 42434302
Alignment:
Q  121 aaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||| ||| | ||| |||||| ||| ||||||||||||||||||||||||    
T  42434247 aaattttgatcgtctcaaaagttgtcatataaatagatgttcaaataacacaactc 42434302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 18846733 - 18846795
Alignment:
Q  115 tttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||| ||||||||||||||||  ||||||||||  || || ||||||||||||||| ||||||    
T  18846733 tttgcaaaattttgattgtcataaaaattgtcatctaaatggatgttcaaataacataactct 18846795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 29349622 - 29349688
Alignment:
Q  109 atttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    |||| ||||||||||||||||||||||| ||| ||||||  || || |||||| |||||||| ||||    
T  29349622 attttctttgtaaaattttgattgtcacaaaagttgtcatctaaatggatgttgaaataacataact 29349688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 22416316 - 22416356
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcac 136  Q
    |||||||| |||||||| ||||||||||||||| |||||||    
T  22416316 gtgccactgcctcattttctttgtaaaattttggttgtcac 22416356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 22416350 - 22416386
Alignment:
Q  142 ttgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||| |||||| |||||||||||||||||||||||    
T  22416350 ttgtcacatatatggatgttcaaataacacaactctt 22416386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 1e-27; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 27465025 - 27464943
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  27465025 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 27464943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 100 - 173
Target Start/End: Original strand, 45333818 - 45333891
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaa 173  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||||||    
T  45333818 cactacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataacacaa 45333891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 26469466 - 26469542
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  26469466 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 48470742 - 48470822
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||| || ||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  48470742 gtgccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 649876 - 649955
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| |||| | ||||||||||||||||||||||||    
T  649876 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaactcttt 649955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 31088284 - 31088366
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||||||||||  |||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  31088284 gtgccactacctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 31088366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 45121448 - 45121367
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||||    
T  45121448 gtgccactac-tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 45121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 44914536 - 44914459
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcac-gaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||| |||||| |||||||||||||||||||||    
T  44914536 cactacctcatttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 50726216 - 50726136
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||| ||||| ||||||||| ||||||| |||||| ||| |||||| |||||||||||||||||||||    
T  50726216 gtgccactacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 50726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 23645514 - 23645597
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||| | ||||||  |||||||||||||| ||||||||    
T  23645514 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaataacataactcttt 23645597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 37274997 - 37274918
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||||| || ||  ||||||||||||||||||||||||    
T  37274997 cactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactcttt 37274918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 19055717 - 19055643
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    ||||||||||||||||||||||  ||||||| ||| |||||| |||||| |||||||||||||||||||||||||    
T  19055717 ctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctttt 19055643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 33100915 - 33100992
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||  |||||||||||||||||||||    
T  33100915 cactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactct 33100992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 8350162 - 8350087
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||| |||||||||||||| ||||| ||||||||||| |||||| |||||| |||||||||||||||||||||    
T  8350162 cactaccttatttcctttgtaaa-ttttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 8350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 35369807 - 35369879
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 172  Q
    |||||||||||||||||| |||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||    
T  35369807 cactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 44519112 - 44519039
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||||||||||| || |||| ||| |||||| ||||||  ||||||||||||||||||||    
T  44519112 tacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 30735256 - 30735180
Alignment:
Q  101 actacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||||||| |||| |||||||||||||||||| |||||| ||| ||| || ||| ||||||||||||||||||    
T  30735256 actacctcatttactttataaaattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactct 30735180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 37619647 - 37619727
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||| |||||||||||||||||||||||||| |||| |  ||| |||||| |||||| ||||||||||||||| |||||    
T  37619647 gtgccaatacctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataacataactc 37619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 45640405 - 45640488
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    |||||| || |||||||| |||||||||||||| |||  || ||| |||||| ||||||||||||||||||||||||||||||||    
T  45640405 gtgccaatatctcatttc-tttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaactctttt 45640488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 15470019 - 15469945
Alignment:
Q  101 actacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||| ||||||||| |||||||| |||||| ||| ||||||  ||||||||||||||||||||    
T  15470019 actacctcatttcctttataaaattttaattgtcac-aaaattatcacatatatgaatgttcaaataacacaactc 15469945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 21401508 - 21401583
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| ||||||||||||||||||||  | ||| |||||| ||| || |||||||||||||||||||||||    
T  21401508 tacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactctt 21401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 50932414 - 50932481
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 170  Q
    |||||||||||||||||||||||||| |||| || ||| |||||| |||||| |||||||||||||||    
T  50932414 tacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 3851265 - 3851335
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataaca 170  Q
    |||||||||||||||||| |||||||||| ||||||  ||| |||||| |||||| |||||||||||||||    
T  3851265 cactacctcatttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 3981984 - 3981914
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||| ||||||||||||||||||||||| ||  |||||| || ||| |||||||||||||||||||||    
T  3981984 ctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaactc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 37685436 - 37685517
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 181  Q
    |||||||||||||| ||||||||||||| |||||||| |||||| ||| || |||  |||||||||||||| ||||| ||||    
T  37685436 cactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactcattta 37685517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 37700082 - 37700001
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 181  Q
    |||||||||||||| ||||||||||||| |||||||| |||||| ||| || |||  |||||||||||||| ||||| ||||    
T  37700082 cactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactcattta 37700001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 40861230 - 40861154
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacaca 172  Q
    ||||||||| || ||||||||| |||||||||  ||||||| ||| ||| || ||||||||||||||||||||||||    
T  40861230 gtgccactatcttatttcctttataaaattttagttgtcacaaaagttgacacatatatagatgttcaaataacaca 40861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 43775319 - 43775399
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaaataa 186  Q
    ||||||| ||||||||||||||||||||||  ||| |||||| ||||||  || |||||||||||||| |||||| |||||    
T  43775319 ctcattttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaagtctttttaataa 43775399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 18434898 - 18434981
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||| ||| |||||| ||||| ||||||||| ||||||| ||| ||||||  || |||||| ||||||||||||||||||||    
T  18434898 gtgccaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaactcttt 18434981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 46907305 - 46907380
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||||||||| | ||| |||||  ||| || |||||||||||||||||||||||    
T  46907305 tacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactctt 46907380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 52576263 - 52576188
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatat-agatgttcaaataacacaactct 177  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||  ||||| |  ||||||||||||||||||||    
T  52576263 tacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaactct 52576188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 2571742 - 2571824
Alignment:
Q  100 cactacctcatttcctttgt-aaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 181  Q
    ||||||||||||| |||||| ||||||||| ||||||| ||| |||||| ||  || ||||||||||||||||||||| ||||    
T  2571742 cactacctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaactcgttta 2571824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 181
Target Start/End: Original strand, 50149060 - 50149134
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttta 181  Q
    |||||| ||||||||||||||||||||  | ||| |||||| ||| |  ||||||||||||||||||||||||||    
T  50149060 tcattttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaactctttta 50149134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 175
Target Start/End: Complemental strand, 49065332 - 49065253
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    |||||| ||| |||||| ||||||||||||||| || ||   |||||||||| ||| |||||| ||||||||||||||||    
T  49065332 gtgccaatacttcattttctttgtaaaattttggttatctttaaaattgtcatataaatagatattcaaataacacaact 49065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 3159479 - 3159516
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgt 133  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  3159479 gtgccactacctcatttcctttgtaaaattttggttgt 3159516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 19947705 - 19947632
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||| ||| |||| |||||||||| ||||| | ||| |||||| ||| ||| ||||||||||||||||||||    
T  19947705 tacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactc 19947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 30467483 - 30467419
Alignment:
Q  114 ctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||  ||||||| ||| |||||| |||  |||||||||||||||||||||||||    
T  30467483 ctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaactctt 30467419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 48103330 - 48103250
Alignment:
Q  97 tgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatg-ttcaaataacacaactc 176  Q
    ||||| ||||| |||| ||||||||||||||| ||||| | ||| |||||| ||| ||||||| |||||||| ||||||||    
T  48103330 tgccaataccttattttctttgtaaaattttggttgtctcaaaagttgtcatataaatagatgtttcaaatatcacaactc 48103250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 31827064 - 31827135
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||  |||||||||||||| ||||  | ||| ||||||  || |||||||||||||||||||||||||    
T  31827064 ctcattttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaactct 31827135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 4776859 - 4776909
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtc 146  Q
    |||||||||||||||||||||| ||||||||  |||||||| ||| |||||    
T  4776859 gtgccactacctcatttcctttataaaatttaaattgtcacaaaagttgtc 4776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 41677258 - 41677220
Alignment:
Q  142 ttgtcagatatatagatgttcaaataacacaactctttt 180  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  41677258 ttgtcacatatatggatgttcaaataacacaactctttt 41677220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 6693267 - 6693300
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcac 136  Q
    ||||||||||||||||||||||||||||| ||||    
T  6693267 tacctcatttcctttgtaaaattttgattatcac 6693300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 12657329 - 12657366
Alignment:
Q  99 ccactacctcatttcctttgtaaaattttgattgtcac 136  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  12657329 ccactacctcatttcctttataaaattttggttgtcac 12657366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 18512304 - 18512227
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    |||||||||| |||| |||||||||  |||||   |||||| ||| ||| || |||||| ||||||||||||||||||    
T  18512304 tacctcattttctttataaaattttagttgtcttaaaaattatcatataaattgatgttgaaataacacaactctttt 18512227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 26207955 - 26208024
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||| ||||| |||||||||||| |||| ||| || | |  || ||||||||||||||||||||||||    
T  26207955 tcattttctttgcaaaattttgattatcacaaaagttataatctaaatagatgttcaaataacacaactc 26208024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 175
Target Start/End: Original strand, 30570645 - 30570706
Alignment:
Q  114 ctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    ||||||||||||||||||||  | |||||| ||| ||| ||  |||||||||||||||||||    
T  30570645 ctttgtaaaattttgattgtttcaaaaattatcatataaatgaatgttcaaataacacaact 30570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 50333337 - 50333397
Alignment:
Q  122 aattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttttaa 182  Q
    ||||||| ||||||| ||| |||||| |||||| |||| | ||||||||||| ||||||||    
T  50333337 aattttggttgtcacaaaagttgtcacatatatggatggttaaataacacaattcttttaa 50333397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 8775 - 8855
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctttt 180  Q
    ||||||||||||||||||||||||||||| ||||||  ||| ||||||||||||| |||||||||||||||||||||||||    
T  8775 cactacctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactctttt 8855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 38956586 - 38956506
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  38956586 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 32529820 - 32529745
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||    
T  32529820 cactacctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaact 32529745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 44895540 - 44895460
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||| | |||||| ||||||||||||||| |||||    
T  44895540 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacataactc 44895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 3937091 - 3937008
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||| ||||||||||||||| |||||||||| ||||||| ||| |||||| || ||| ||||||||||||||||||||||||    
T  3937091 gtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactcttt 3937008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 24614280 - 24614203
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||||||||||||||||||||||||||| |||| ||| || ||| ||||||  |||||||||||||||||||||    
T  24614280 cactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactct 24614203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 40112922 - 40112841
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||||||| |||||||||||||||||||||||||||   || |||| | |||||| ||||||||||||||||||||||    
T  40112922 gtgccactaccttatttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaataacacaactct 40112841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 43025443 - 43025524
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||| ||||||||||||||||||||||  |||| || ||| |||||| |||||||||||||| ||||||||||||||    
T  43025443 gtgccactatctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaactct 43025524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 22918137 - 22918057
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| |||||| || ||| |||| |||||||| |||||||    
T  22918137 gtgccactacctcatttcctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaataatacaactc 22918057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 43942743 - 43942818
Alignment:
Q  104 acctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||| ||||||||||||||| ||| ||| |||||| ||| |||||| ||||||||||||||||||||||||    
T  43942743 acctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactcttt 43942818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 41189504 - 41189428
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatata--gatgttcaaataacacaactct 177  Q
    |||||||||||||||||||||||||||||||||  ||| || ||| |||||||   |||||||||||||||||||||    
T  41189504 tacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaactct 41189428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 25192881 - 25192802
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||||||| ||||||||||||||  ||||||| ||| |||||| || |||  || ||||||||||||||||||||    
T  25192881 cactacctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactcttt 25192802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 41989710 - 41989628
Alignment:
Q  96 gtgccactacctcatttccttt--gtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||  |||  ||||||||||| ||||||| ||| || ||| |||||| |||||||||||||||||||||    
T  41989710 gtgccactacctcattttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 41989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 46022228 - 46022153
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  46022228 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 46022153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 40417884 - 40417957
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||| || ||||||||||||||| ||||| | ||| |||||  ||| ||||||||||||||||||||||||    
T  40417884 tacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactc 40417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 45851164 - 45851095
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||||||  ||||||  |||||||| | | |||| |||||||||||||||||||||    
T  45851164 tcatttcctttgtaaaattttagttgtcaaaaaaattgtgacagatatggatgttcaaataacacaactc 45851095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 7701654 - 7701729
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| ||||| |||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  7701654 tacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 7701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 31445431 - 31445502
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||| ||||||||||||||||||||  | |||||| ||| ||| |  ||||||||||||||||||||||    
T  31445431 ctcattttctttgtaaaattttgattgttgcaaaaattatcatataaaatgatgttcaaataacacaactct 31445502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 38073323 - 38073363
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcac 136  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  38073323 gtgccaatacctcatttcctttgtaaaattttggttgtcac 38073363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 38861199 - 38861239
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcac 136  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  38861199 gtgccactaccttatttactttgtaaaattttgattgtcac 38861239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 46578103 - 46578023
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||| |||||| |||| ||| |||||||||| ||||||   ||||| ||| |||||| ||||||||||||| |||||||    
T  46578103 gtgccaatacctcgtttcttttataaaattttggttgtcatagaaattatcacatatatggatgttcaaataagacaactc 46578023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 552896 - 552976
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  552896 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 14818035 - 14818115
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||| |||||| ||||||| ||||||||||||||||||||    
T  14818035 gtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaactc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 33430326 - 33430247
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||||  |||| ||||||||||||||||||    
T  33430326 cactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaactcttt 33430247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 15974716 - 15974794
Alignment:
Q  101 actacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||| | |||||| ||||||||||||||||||||||||    
T  15974716 actacttcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaactcttt 15974794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 32316889 - 32316815
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||    
T  32316889 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 32316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 1156823 - 1156904
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    ||||||||| ||||||||||||  ||||||||||||||||| ||| || ||| |||||| ||||||||||||||||||||||    
T  1156823 gtgccactatctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactct 1156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 11612298 - 11612370
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaact 175  Q
    |||||||||| |||||||||||||||||| |||| |||||| ||| ||||||| || ||||||||||||||||    
T  11612298 tacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaact 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 13689955 - 13689882
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||| |||||||||  |||||   |||||||||| |||||| |||||||||||||||||||||    
T  13689955 tacctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 18737528 - 18737460
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacac 171  Q
    |||||||||| ||||||||||||||| ||||||| ||| |||||| ||| || ||||||||||||||||    
T  18737528 tacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacac 18737460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 26595459 - 26595535
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||||||| ||||||||||||||| ||||  | ||| |||||| ||| || ||||||||||||||||||||||||    
T  26595459 tacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactcttt 26595535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 31077901 - 31077977
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||| |||||||||||||||||| ||||||| ||| |||||| || |||  || |||||||||||||||||    
T  31077901 cactacctcacttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 16199560 - 16199635
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||||| |||| |||||||||| ||||| | ||| |||||| ||| || |||||||||||||||||||||||    
T  16199560 tacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 16199635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 34047490 - 34047573
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||| || ||| ||| ||||||||||||||| ||||||| ||| |||||| || ||| ||||||||||||||| ||||||||    
T  34047490 gtgccaatatctctttttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaactcttt 34047573  T

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Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 4820479 - 4820552
Alignment:
Q  105 cctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactctt 178  Q
    |||||||| ||||||||||||||||||||| | ||| || |||  || |||| |||||||||||||||||||||    
T  4820479 cctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactctt 4820552  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 5694112 - 5694039
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||||||||||||||||||||| | ||||| | ||| |||||| ||| ||  ||||| ||||||||||||||    
T  5694112 tacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaactc 5694039  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 277105 - 277174
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||| ||||||||||||||| ||||||| ||||||||||  || |   ||||| ||||||||||||||    
T  277105 tcattttctttgtaaaattttggttgtcacaaaaattgtcatctaaaggaatgtttaaataacacaactc 277174  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 22079520 - 22079451
Alignment:
Q  107 tcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    |||||| ||||| ||||||||| ||||||| ||| | ||||  || || |||||||||||||||||||||    
T  22079520 tcattttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaactc 22079451  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 24900887 - 24900960
Alignment:
Q  106 ctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||| |||||||||||||| |||||  | ||  |||||| ||| |  ||||||||||||||||||||||||    
T  24900887 ctcattttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacacaactcttt 24900960  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 128
Target Start/End: Complemental strand, 5080531 - 5080503
Alignment:
Q  100 cactacctcatttcctttgtaaaattttg 128  Q
    |||||||||||||||||||||||||||||    
T  5080531 cactacctcatttcctttgtaaaattttg 5080503  T

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Target: scaffold0056 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 76587 - 76504
Alignment:
Q  96 gtgccactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||| |||||| |||||| |||||||||||||||||    
T  76587 gtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaactcttt 76504  T

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Target: scaffold0098 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 49402 - 49478
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactc 176  Q
    ||||||||||||||||||||||||||||| || |||| ||| |||||| |||||| ||||||||||||||| |||||    
T  49402 cactacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataacataactc 49478  T

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Target: scaffold0519 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 11892 - 11966
Alignment:
Q  103 tacctcatttcctttgtaaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactct 177  Q
    |||||||||| ||||||||||||||| | ||||| ||| |||||| || ||||||||||||||||| ||||||||    
T  11892 tacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11966  T

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Target: scaffold0067 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 136
Target Start/End: Original strand, 35630 - 35666
Alignment:
Q  100 cactacctcatttcctttgtaaaattttgattgtcac 136  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35630 cactacctcattttctttgtaaaattttgattgtcac 35666  T

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Target: scaffold0148 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 20845 - 20786
Alignment:
Q  120 aaaattttgattgtcacgaaaattgtcagatatatagatgttcaaataacacaactcttt 179  Q
    |||||||||||| |||| |||||| |||  || || ||||||||||||||||||||||||    
T  20845 aaaattttgattatcacaaaaattatcatttaaatggatgttcaaataacacaactcttt 20786  T

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