View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13610_low_14 (Length: 369)
Name: NF13610_low_14
Description: NF13610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13610_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 21484274 - 21484600
Alignment:
| Q |
1 |
ttctaaaagctccatgtaaccaaaagtatccataatgttaacatcatccatgcaatcaccaccaccaacaacaacatcattgttagaaacaccaagatct |
100 |
Q |
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| T |
21484274 |
ttctaaaagctccatgtaaccaaaagtatccataatgttaacatcatccatgcaatcaccaccaccaacaacaacatcattgttagaaacaccaagatct |
21484373 |
T |
|
| Q |
101 |
tgttgctgttgctgagaaatctccatagaagcagttgatgacaaagttgttggaggatgaccatgatgataatctaatggatgaccatgtttttgatgat |
200 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
21484374 |
tgttgctgttgttgagaaatctccatagaagcagttgatgacaaagttgttggaggatgaccatgatgataatctaatggatgaccatgtttt---tgat |
21484470 |
T |
|
| Q |
201 |
aaccttgatgatctacttcaacatctgatttcaaaacagcccaagaagctgcagatgaagaagaagctgaggaagaagaagaggtagtagttgttgtagt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21484471 |
aaccttgatgatctacttcaacatctgatttcaaaacagcccaagaagctgcagatgaagaagaagctgaggaagaagaagaggtagtagttgttgtagt |
21484570 |
T |
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| Q |
301 |
tgaagtacatgcaatggttttcaatggtgt |
330 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
21484571 |
tgaagtacatgcaatggttttcaatggtgt |
21484600 |
T |
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