View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13611_low_14 (Length: 372)

Name: NF13611_low_14
Description: NF13611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13611_low_14
NF13611_low_14
[»] chr4 (24 HSPs)
chr4 (19-302)||(40702769-40703061)
chr4 (298-371)||(47806857-47806929)
chr4 (300-371)||(5743627-5743697)
chr4 (300-371)||(34273187-34273257)
chr4 (301-371)||(4035825-4035894)
chr4 (301-371)||(5375525-5375594)
chr4 (297-339)||(30771524-30771565)
chr4 (298-339)||(52977979-52978019)
chr4 (299-371)||(43387961-43388032)
chr4 (301-372)||(26625969-26626039)
chr4 (288-339)||(53564356-53564406)
chr4 (301-339)||(9328240-9328277)
chr4 (301-339)||(32032993-32033030)
chr4 (301-339)||(33413518-33413555)
chr4 (301-339)||(44294789-44294826)
chr4 (301-339)||(45742806-45742843)
chr4 (297-339)||(53277185-53277226)
chr4 (298-335)||(4549626-4549662)
chr4 (298-339)||(25708678-25708718)
chr4 (299-336)||(35675923-35675959)
chr4 (299-372)||(49373660-49373732)
chr4 (295-339)||(17610020-17610063)
chr4 (295-339)||(47228728-47228771)
chr4 (298-338)||(55563128-55563167)
[»] chr5 (14 HSPs)
chr5 (297-371)||(1265945-1266018)
chr5 (301-372)||(26894840-26894910)
chr5 (301-371)||(9828393-9828462)
chr5 (301-371)||(22527692-22527761)
chr5 (301-371)||(40004377-40004446)
chr5 (298-370)||(23286443-23286514)
chr5 (301-339)||(6673228-6673265)
chr5 (300-338)||(7951561-7951598)
chr5 (298-336)||(10734526-10734563)
chr5 (301-339)||(14913648-14913685)
chr5 (301-339)||(16127259-16127296)
chr5 (296-338)||(19571940-19571981)
chr5 (301-371)||(34662204-34662273)
chr5 (299-372)||(43060378-43060450)
[»] chr3 (21 HSPs)
chr3 (294-372)||(7181343-7181420)
chr3 (295-339)||(46049986-46050029)
chr3 (299-370)||(14428608-14428678)
chr3 (301-371)||(9499465-9499534)
chr3 (301-371)||(22103897-22103966)
chr3 (301-371)||(25149090-25149159)
chr3 (301-371)||(35868051-35868120)
chr3 (301-371)||(37728713-37728782)
chr3 (301-371)||(44543782-44543851)
chr3 (299-339)||(10220931-10220970)
chr3 (299-339)||(21756484-21756523)
chr3 (295-371)||(50647912-50647987)
chr3 (300-371)||(4024051-4024121)
chr3 (300-339)||(26593765-26593803)
chr3 (301-339)||(12050392-12050429)
chr3 (301-339)||(43868103-43868140)
chr3 (301-339)||(45252773-45252810)
chr3 (301-339)||(51284062-51284099)
chr3 (298-335)||(9779976-9780012)
chr3 (298-339)||(36098963-36099003)
chr3 (295-335)||(20862461-20862500)
[»] chr8 (18 HSPs)
chr8 (299-372)||(2944239-2944311)
chr8 (298-371)||(28192143-28192215)
chr8 (300-371)||(51063-51133)
chr8 (301-371)||(13153928-13153997)
chr8 (301-371)||(32675725-32675794)
chr8 (298-339)||(1774339-1774379)
chr8 (298-371)||(8948319-8948391)
chr8 (299-371)||(36177071-36177142)
chr8 (300-372)||(39029177-39029248)
chr8 (299-371)||(44251089-44251160)
chr8 (296-339)||(34568485-34568527)
chr8 (301-339)||(8251933-8251970)
chr8 (301-339)||(8951428-8951465)
chr8 (301-339)||(18754144-18754181)
chr8 (301-339)||(28572046-28572083)
chr8 (301-339)||(28579639-28579676)
chr8 (299-339)||(9035539-9035578)
chr8 (298-338)||(44502617-44502656)
[»] chr7 (17 HSPs)
chr7 (294-371)||(39871581-39871657)
chr7 (296-339)||(39197713-39197755)
chr7 (301-371)||(21295151-21295220)
chr7 (301-371)||(36698099-36698168)
chr7 (301-371)||(38858298-38858367)
chr7 (301-371)||(41252329-41252398)
chr7 (294-339)||(26255089-26255133)
chr7 (298-371)||(31457994-31458066)
chr7 (295-339)||(32814427-32814470)
chr7 (299-371)||(40300228-40300299)
chr7 (301-372)||(19920563-19920633)
chr7 (301-339)||(29286037-29286074)
chr7 (301-339)||(32872375-32872412)
chr7 (301-339)||(33858866-33858903)
chr7 (301-339)||(41026096-41026133)
chr7 (301-339)||(48521029-48521066)
chr7 (298-335)||(38428411-38428447)
[»] chr2 (19 HSPs)
chr2 (298-371)||(2438222-2438294)
chr2 (300-371)||(27560205-27560275)
chr2 (301-339)||(1943573-1943611)
chr2 (297-371)||(23788965-23789038)
chr2 (301-371)||(34883816-34883885)
chr2 (301-371)||(40607702-40607771)
chr2 (300-339)||(7491843-7491881)
chr2 (300-339)||(8716892-8716930)
chr2 (297-335)||(2438489-2438526)
chr2 (301-339)||(11201683-11201720)
chr2 (301-339)||(17408294-17408331)
chr2 (301-339)||(20252210-20252247)
chr2 (297-335)||(22897655-22897692)
chr2 (301-339)||(34062665-34062702)
chr2 (298-336)||(34113789-34113826)
chr2 (301-339)||(36131028-36131065)
chr2 (301-339)||(41450516-41450553)
chr2 (294-335)||(45474344-45474384)
chr2 (295-339)||(44436821-44436864)
[»] chr1 (25 HSPs)
chr1 (298-371)||(15811200-15811272)
chr1 (298-371)||(49907018-49907090)
chr1 (295-371)||(11741391-11741466)
chr1 (301-372)||(4102681-4102751)
chr1 (296-371)||(37951917-37951991)
chr1 (301-371)||(1039349-1039418)
chr1 (301-371)||(1046255-1046324)
chr1 (301-371)||(23541979-23542048)
chr1 (301-371)||(36694854-36694923)
chr1 (301-371)||(36710955-36711024)
chr1 (301-371)||(39497433-39497502)
chr1 (301-371)||(45039412-45039481)
chr1 (301-371)||(52431142-52431211)
chr1 (298-339)||(943637-943677)
chr1 (298-339)||(30290262-30290302)
chr1 (298-339)||(39363194-39363234)
chr1 (298-339)||(44649626-44649666)
chr1 (302-370)||(30289831-30289898)
chr1 (297-335)||(39497697-39497734)
chr1 (301-339)||(46075867-46075904)
chr1 (294-335)||(45039676-45039716)
chr1 (299-339)||(14171540-14171579)
chr1 (296-336)||(42872337-42872376)
chr1 (299-335)||(44646535-44646570)
chr1 (299-335)||(44649893-44649928)
[»] chr6 (9 HSPs)
chr6 (300-371)||(34301800-34301870)
chr6 (301-371)||(23398107-23398176)
chr6 (300-339)||(231105-231143)
chr6 (301-339)||(4844400-4844437)
chr6 (301-339)||(8743188-8743225)
chr6 (298-336)||(11847835-11847872)
chr6 (301-339)||(30248647-30248684)
chr6 (299-372)||(925900-925972)
chr6 (291-335)||(17175194-17175237)
[»] scaffold0161 (1 HSPs)
scaffold0161 (296-372)||(3433-3507)
[»] scaffold0674 (1 HSPs)
scaffold0674 (296-339)||(5146-5188)
[»] scaffold0604 (1 HSPs)
scaffold0604 (301-372)||(3750-3819)
[»] scaffold0549 (1 HSPs)
scaffold0549 (296-339)||(10182-10224)
[»] scaffold0240 (1 HSPs)
scaffold0240 (296-339)||(18492-18534)
[»] scaffold0122 (1 HSPs)
scaffold0122 (301-339)||(12065-12102)
[»] scaffold0029 (1 HSPs)
scaffold0029 (301-339)||(51682-51719)
[»] scaffold0012 (1 HSPs)
scaffold0012 (301-339)||(47640-47677)
[»] scaffold0008 (1 HSPs)
scaffold0008 (301-339)||(259122-259159)
[»] scaffold0368 (1 HSPs)
scaffold0368 (296-336)||(8213-8252)
[»] scaffold0339 (1 HSPs)
scaffold0339 (295-339)||(7140-7183)


Alignment Details
Target: chr4 (Bit Score: 169; Significance: 1e-90; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 19 - 302
Target Start/End: Original strand, 40702769 - 40703061
Alignment:
Q  19 accaacatttatattcactcatcaaactcaatactgctagacgaacattttttagttggaaaaaccaactaaaatttataaagaatgacatgttttgttt 118  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||      | || |||||||||||||||||||||||||||||||||||||||||||||    
T  40702769 accaatatttatatccactcatcaaactcaatactgttagacgag-----tgta-ttggaaaaaccaactaaaatttataaagaatgacatgttttgttt 40702862  T
Q  119 agtttcaatatagaacctagtaataactatgataaaataggataaaagtagctgaagttttattgtaattcattctggtgagagtaacattttttgtttt 218  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40702863 agttccaatatagaacctagtaataactatgataaaataggataaaagtagctgaagttttattgtaattcattctggtgagagtaacattttttgtttt 40702962  T
Q  219 ctttaaaactagttagtttgg---------------ccttcactgatttgattgcgatccattcgaatttgnnnnnnnncttctagagagaatttatta 302  Q
    ||||||||||| |||||||||               |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  40702963 ctttaaaactaattagtttggcttaagtgttaatgaccttcactgatttgattgcgatccattcgaatttgttttttttcttctagagagaatttatta 40703061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 371
Target Start/End: Original strand, 47806857 - 47806929
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  47806857 tattactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 47806929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 371
Target Start/End: Complemental strand, 5743697 - 5743627
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  5743697 ttactccctccgtccc-taattataagacccttttgagaaaaaaatttgtccctttttataagacccctttg 5743627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 371
Target Start/End: Complemental strand, 34273257 - 34273187
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  34273257 ttactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 34273187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 4035825 - 4035894
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  4035825 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 4035894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 5375594 - 5375525
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  5375594 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 5375525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 30771524 - 30771565
Alignment:
Q  297 ttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  30771524 ttattactccctccgtccc-taattataagacccttttgagaa 30771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 52977979 - 52978019
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  52977979 tattactccctccgtccc-taattataagacccttttgagaa 52978019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 371
Target Start/End: Complemental strand, 43388032 - 43387961
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||| |||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  43388032 attacttcctccgtccc-taattataagacccttttgagaatttcttttgtccctttttataagacccctttg 43387961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 372
Target Start/End: Complemental strand, 26626039 - 26625969
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    ||||||||||||||| ||||||||||||||||||||||          ||||||||||||||||||||||||    
T  26626039 tactccctccgtccc-taattataagacccttttgagatttttttttgtccctttttataagacccctttgc 26625969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 53564406 - 53564356
Alignment:
Q  288 agagagaatttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||| || ||||||| |||||||||| |||||||||||||||||||||||    
T  53564406 agagagtatatattactacctccgtccc-taattataagacccttttgagaa 53564356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 9328277 - 9328240
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  9328277 tactccctccgtccc-taattataagacccttttgagaa 9328240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 32033030 - 32032993
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  32033030 tactccctccgtccc-taattataagacccttttgagaa 32032993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 33413518 - 33413555
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  33413518 tactccctccgtccc-taattataagacccttttgagaa 33413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 44294789 - 44294826
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  44294789 tactccctccgtccc-taattataagacccttttgagaa 44294826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 45742843 - 45742806
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  45742843 tactccctccgtccc-taattataagacccttttgagaa 45742806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 53277226 - 53277185
Alignment:
Q  297 ttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||||||| |||||||||||||||||| ||||    
T  53277226 ttattactccctccgtccc-taattataagacccttttaagaa 53277185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 4549626 - 4549662
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttg 335  Q
    |||||||||||||||||| |||||||||||||||||||    
T  4549626 tattactccctccgtccc-taattataagacccttttg 4549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 25708718 - 25708678
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  25708718 tattactccctccgtccc-taattataagacctttttgagaa 25708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 35675959 - 35675923
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttga 336  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  35675959 attactccctccgtccc-taattataagacccttttga 35675923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 49373732 - 49373660
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    |||||| |||||||||| |||||||||||||||||||||||          |||||||||||||||||||||||    
T  49373732 attactacctccgtccc-taattataagacccttttgagaattttttttggccctttttataagacccctttgc 49373660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 17610063 - 17610020
Alignment:
Q  295 atttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||||    
T  17610063 atttaatactccctccgtccc-taattataagatccttttgagaa 17610020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 47228771 - 47228728
Alignment:
Q  295 atttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||    
T  47228771 attttttacttcctccgtccc-taattataagacccttttgagaa 47228728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 55563167 - 55563128
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgaga 338  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  55563167 tattactacctccgtccc-taattataagacccttttgaga 55563128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 297 - 371
Target Start/End: Original strand, 1265945 - 1266018
Alignment:
Q  297 ttattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  1265945 ttattactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 1266018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 372
Target Start/End: Complemental strand, 26894910 - 26894840
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    ||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||| |||||    
T  26894910 tactccctccgtccc-taattataagacccttttgagaattttttttatccctttttataagacccatttgc 26894840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 9828393 - 9828462
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  9828393 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 9828462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 22527692 - 22527761
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  22527692 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 22527761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 40004446 - 40004377
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  40004446 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 40004377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 370
Target Start/End: Complemental strand, 23286514 - 23286443
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagaccccttt 370  Q
    ||||||| |||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||    
T  23286514 tattactacctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagaccccttt 23286443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 6673265 - 6673228
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  6673265 tactccctccgtccc-taattataagacccttttgagaa 6673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 338
Target Start/End: Original strand, 7951561 - 7951598
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgaga 338  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  7951561 ttactccctccgtccc-taattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 10734563 - 10734526
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttga 336  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  10734563 tattactccctccgtccc-taattataagacccttttga 10734526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 14913648 - 14913685
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  14913648 tactccctccgtccc-taattataagacccttttgagaa 14913685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 16127259 - 16127296
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  16127259 tactccctccgtccc-taattataagacccttttgagaa 16127296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 338
Target Start/End: Complemental strand, 19571981 - 19571940
Alignment:
Q  296 tttattactccctccgtcccctaattataagacccttttgaga 338  Q
    ||||||||| |||||||||| ||||||||||||||||||||||    
T  19571981 tttattactacctccgtccc-taattataagacccttttgaga 19571940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 34662204 - 34662273
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| ||||||||||||||||||||||          |||||||||||||||||||||||    
T  34662204 tactccctccgtccc-taattataagacccttttgagagttttttttgtccctttttataagacccctttg 34662273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 43060450 - 43060378
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    |||||| |||||||||| |||||||||||||||||||||||         |||||||||||||||||| |||||    
T  43060450 attactacctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccttttgc 43060378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 372
Target Start/End: Original strand, 7181343 - 7181420
Alignment:
Q  294 aatttattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||||    
T  7181343 aatttaatactccctccgtccc-taattataagacccttttgagaaatttttttgtccctttttataagacccctttgc 7181420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 46050029 - 46049986
Alignment:
Q  295 atttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  46050029 atttattactccctccgtccc-taattataagacccttttgagaa 46049986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 14428608 - 14428678
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagaccccttt 370  Q
    ||||||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||    
T  14428608 attactccctccgtccc-taattataagacccttttgagaaatttttttgtccctttttataagaccccttt 14428678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 9499534 - 9499465
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  9499534 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 9499465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 22103966 - 22103897
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  22103966 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 22103897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 25149159 - 25149090
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  25149159 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 25149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 35868120 - 35868051
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  35868120 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 35868051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 37728713 - 37728782
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  37728713 tactccctccgtccc-taattataagacccttttgagaatatttgttgtccctttttataagacccctttg 37728782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 44543782 - 44543851
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  44543782 tactccctccgtccc-taattataagacccttttgagaatttcttttgtccctttttataagacccctttg 44543851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 10220931 - 10220970
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  10220931 attactccctccgtccc-taattataagacccttttgagaa 10220970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 21756484 - 21756523
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  21756484 attactccctccgtccc-taattataagacccttttgagaa 21756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 371
Target Start/End: Complemental strand, 50647987 - 50647912
Alignment:
Q  295 atttattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||         |||||||||||||||||||||||    
T  50647987 atttactactccctccgtctc-taattataagacccttttgagaaaaaattttgtccctttttataagacccctttg 50647912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 371
Target Start/End: Original strand, 4024051 - 4024121
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||||||||||||| ||||||||||||||||||||||          |||||||||||||||||||||||    
T  4024051 ttactccctccgtccc-taattataagacccttttgagatttttttttgtccctttttataagacccctttg 4024121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 26593803 - 26593765
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  26593803 ttactccctccgtccc-taattataagacccttttgagaa 26593765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 12050429 - 12050392
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  12050429 tactccctccgtccc-taattataagacccttttgagaa 12050392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 43868103 - 43868140
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  43868103 tactccctccgtccc-taattataagacccttttgagaa 43868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 45252773 - 45252810
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  45252773 tactccctccgtccc-taattataagacccttttgagaa 45252810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 51284099 - 51284062
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  51284099 tactccctccgtccc-taattataagacccttttgagaa 51284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 9779976 - 9780012
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttg 335  Q
    |||||||||||||||||| |||||||||||||||||||    
T  9779976 tattactccctccgtccc-taattataagacccttttg 9780012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 36098963 - 36099003
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  36098963 tattactccatccgtccc-taattataagacccttttgagaa 36099003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 20862500 - 20862461
Alignment:
Q  295 atttattactccctccgtcccctaattataagacccttttg 335  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  20862500 atttaatactccctccgtccc-taattataagacccttttg 20862461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 2944311 - 2944239
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    ||||||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||||    
T  2944311 attactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttgc 2944239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 371
Target Start/End: Complemental strand, 28192215 - 28192143
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  28192215 tattactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 28192143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 371
Target Start/End: Complemental strand, 51133 - 51063
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  51133 ttactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 51063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 13153928 - 13153997
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  13153928 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 13153997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 32675794 - 32675725
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  32675794 tactccctccgtccc-taattataagacccttttgagaaaaaaatttgtccctttttataagacccctttg 32675725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 1774339 - 1774379
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  1774339 tattactccctccgtccc-taattataagacccttttgagaa 1774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 371
Target Start/End: Complemental strand, 8948391 - 8948319
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||| |||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  8948391 tattactccatccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 8948319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 371
Target Start/End: Complemental strand, 36177142 - 36177071
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||||| |||||||||||| ||||||||||         |||||||||||||||||||||||    
T  36177142 attactccctccgtccc-taattataagactcttttgagaattttttttgtccctttttataagacccctttg 36177071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 39029177 - 39029248
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    |||||||||||||||| |||||||||||||||||||||||         ||| ||||||||||||||||||||    
T  39029177 ttactccctccgtccc-taattataagacccttttgagaaaattttttgtccttttttataagacccctttgc 39029248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 371
Target Start/End: Complemental strand, 44251160 - 44251089
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||||| ||||||||||||| |||||||||         |||||||||||||||||||||||    
T  44251160 attactccctccgtccc-taattataagaccattttgagaattttttttgtccctttttataagacccctttg 44251089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 34568485 - 34568527
Alignment:
Q  296 tttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  34568485 tttaatactccctccgtccc-taattataagacccttttgagaa 34568527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 8251970 - 8251933
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8251970 tactccctccgtccc-taattataagacccttttgagaa 8251933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 8951465 - 8951428
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8951465 tactccctccgtccc-taattataagacccttttgagaa 8951428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 18754144 - 18754181
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  18754144 tactccctccgtccc-taattataagacccttttgagaa 18754181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 28572046 - 28572083
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  28572046 tactccctccgtccc-taattataagacccttttgagaa 28572083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 28579639 - 28579676
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  28579639 tactccctccgtccc-taattataagacccttttgagaa 28579676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 9035578 - 9035539
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  9035578 attactccctccgtccc-taattataagaccattttgagaa 9035539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 44502617 - 44502656
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgaga 338  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  44502617 tattactccctccgtccc-taattataagatccttttgaga 44502656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 294 - 371
Target Start/End: Complemental strand, 39871657 - 39871581
Alignment:
Q  294 aatttattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  39871657 aatttaatactccctccgtccc-taattataagacccttttgagaaatttttttgtccctttttataagacccctttg 39871581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 39197713 - 39197755
Alignment:
Q  296 tttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  39197713 tttattactccctccgtccc-taattataagacccttttgagaa 39197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 21295151 - 21295220
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  21295151 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 21295220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 36698168 - 36698099
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||| |||||    
T  36698168 tactccctccgtccc-taattataagacccttttgagaattttttttatccctttttataagaccactttg 36698099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 38858298 - 38858367
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  38858298 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 38858367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 41252398 - 41252329
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  41252398 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 41252329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 339
Target Start/End: Original strand, 26255089 - 26255133
Alignment:
Q  294 aatttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  26255089 aattaattactccctccgtccc-taattataagacccttttgagaa 26255133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 371
Target Start/End: Original strand, 31457994 - 31458066
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||| |||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  31457994 tattacttcctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 31458066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 32814427 - 32814470
Alignment:
Q  295 atttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  32814427 atttaatactccctccgtccc-taattataagacccttttgagaa 32814470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 371
Target Start/End: Original strand, 40300228 - 40300299
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||||| ||||||||||||||||||||||          |||||||||||||||||||||||    
T  40300228 attactccctccgtccc-taattataagacccttttgagatttttttttgtccctttttataagacccctttg 40300299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 372
Target Start/End: Original strand, 19920563 - 19920633
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    ||||||||||||||| |||||||||||||||||||||||         | ||||||||||||||||||||||    
T  19920563 tactccctccgtccc-taattataagacccttttgagaattttttttgttcctttttataagacccctttgc 19920633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 29286074 - 29286037
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  29286074 tactccctccgtccc-taattataagacccttttgagaa 29286037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 32872412 - 32872375
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  32872412 tactccctccgtccc-taattataagacccttttgagaa 32872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 33858903 - 33858866
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  33858903 tactccctccgtccc-taattataagacccttttgagaa 33858866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 41026133 - 41026096
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  41026133 tactccctccgtccc-taattataagacccttttgagaa 41026096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 48521029 - 48521066
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  48521029 tactccctccgtccc-taattataagacccttttgagaa 48521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 38428447 - 38428411
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttg 335  Q
    |||||||||||||||||| |||||||||||||||||||    
T  38428447 tattactccctccgtccc-taattataagacccttttg 38428411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 371
Target Start/End: Original strand, 2438222 - 2438294
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  2438222 tattactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 2438294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 371
Target Start/End: Original strand, 27560205 - 27560275
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  27560205 ttactccctccgtccc-taattataagacccttttgagaaaaatttttgtccctttttataagacccctttg 27560275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 1943573 - 1943611
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  1943573 tactcgctccgtcccctaattataagacccttttgagaa 1943611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 371
Target Start/End: Original strand, 23788965 - 23789038
Alignment:
Q  297 ttattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||||||  |||||||||||||||||||||||         |||||||||||||||||||||||    
T  23788965 ttattactccctccgtcct-taattataagacccttttgagaaatttttttgtccctttttataagacccctttg 23789038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 34883885 - 34883816
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  34883885 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 34883816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 40607702 - 40607771
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  40607702 tactccctccgtccc-taattataagacccttttgagaaatttttttgtccctttttataagacccctttg 40607771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Original strand, 7491843 - 7491881
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  7491843 ttactccctccgtccc-taattataagacccttttgagaa 7491881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 8716930 - 8716892
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  8716930 ttactccctccgtccc-taattataagacccttttgagaa 8716892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 2438526 - 2438489
Alignment:
Q  297 ttattactccctccgtcccctaattataagacccttttg 335  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  2438526 ttattactccctccgtccc-taattataagacccttttg 2438489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 11201683 - 11201720
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  11201683 tactccctccgtccc-taattataagacccttttgagaa 11201720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 17408331 - 17408294
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  17408331 tactccctccgtccc-taattataagacccttttgagaa 17408294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 20252210 - 20252247
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20252210 tactccctccgtccc-taattataagacccttttgagaa 20252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 22897692 - 22897655
Alignment:
Q  297 ttattactccctccgtcccctaattataagacccttttg 335  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  22897692 ttattactccctccgtccc-taattataagacccttttg 22897655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 34062702 - 34062665
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  34062702 tactccctccgtccc-taattataagacccttttgagaa 34062665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 34113826 - 34113789
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttga 336  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34113826 tattactccctccgtccc-taattataagacccttttga 34113789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 36131065 - 36131028
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  36131065 tactccctccgtccc-taattataagacccttttgagaa 36131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 41450516 - 41450553
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  41450516 tactccctccgtccc-taattataagacccttttgagaa 41450553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 45474344 - 45474384
Alignment:
Q  294 aatttattactccctccgtcccctaattataagacccttttg 335  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  45474344 aatttgttactccctccgtccc-taattataagacccttttg 45474384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 44436864 - 44436821
Alignment:
Q  295 atttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||| |||||||||| |||| ||||||||||||||||||    
T  44436864 atttattactacctccgtccc-taatgataagacccttttgagaa 44436821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 371
Target Start/End: Complemental strand, 15811272 - 15811200
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  15811272 tattactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 15811200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 371
Target Start/End: Original strand, 49907018 - 49907090
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  49907018 tattactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 49907090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 11741391 - 11741466
Alignment:
Q  295 atttattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  11741391 atttaatactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 11741466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 372
Target Start/End: Complemental strand, 4102751 - 4102681
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    ||||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||||    
T  4102751 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttgc 4102681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 371
Target Start/End: Complemental strand, 37951991 - 37951917
Alignment:
Q  296 tttattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||| ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  37951991 tttaatactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 37951917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 1039418 - 1039349
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  1039418 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 1039349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 1046324 - 1046255
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  1046324 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 1046255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 23541979 - 23542048
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  23541979 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 23542048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 36694854 - 36694923
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  36694854 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 36694923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 36710955 - 36711024
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  36710955 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 36711024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 39497433 - 39497502
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  39497433 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 39497502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Original strand, 45039412 - 45039481
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  45039412 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 45039481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 52431211 - 52431142
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  52431211 tactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 52431142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 943677 - 943637
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  943677 tattactccctccgtccc-taattataagacccttttgagaa 943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 30290262 - 30290302
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  30290262 tattactccctccgtccc-taattataagacccttttgagaa 30290302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Complemental strand, 39363234 - 39363194
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  39363234 tattactccctccgtccc-taattataagacccttttgagaa 39363194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 339
Target Start/End: Original strand, 44649626 - 44649666
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  44649626 tattactccctccgtccc-taattataagacccttttgagaa 44649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 370
Target Start/End: Complemental strand, 30289898 - 30289831
Alignment:
Q  302 actccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagaccccttt 370  Q
    |||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||    
T  30289898 actccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagaccccttt 30289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 39497734 - 39497697
Alignment:
Q  297 ttattactccctccgtcccctaattataagacccttttg 335  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  39497734 ttattactccctccgtccc-taattataagacccttttg 39497697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 46075904 - 46075867
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  46075904 tactccctccgtccc-taattataagacccttttgagaa 46075867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 45039716 - 45039676
Alignment:
Q  294 aatttattactccctccgtcccctaattataagacccttttg 335  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  45039716 aatttattacttcctccgtccc-taattataagacccttttg 45039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 14171540 - 14171579
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  14171540 attactccctccgtctc-taattataagacccttttgagaa 14171579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 42872376 - 42872337
Alignment:
Q  296 tttattactccctccgtcccctaattataagacccttttga 336  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  42872376 tttattactccctccgt-ccctaattgtaagacccttttga 42872337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 44646570 - 44646535
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttg 335  Q
    ||||||||||||||||| |||||||||||||||||||    
T  44646570 attactccctccgtccc-taattataagacccttttg 44646535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 44649928 - 44649893
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttg 335  Q
    ||||||||||||||||| |||||||||||||||||||    
T  44649928 attactccctccgtccc-taattataagacccttttg 44649893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 371
Target Start/End: Complemental strand, 34301870 - 34301800
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    |||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||||    
T  34301870 ttactccctccgtccc-taattataagacccttttgagaattttttttgtccctttttataagacccctttg 34301800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 23398176 - 23398107
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttg 371  Q
    ||||||||||||||| ||||||||||||||||||||| |        ||||||||||||||||||||||||    
T  23398176 tactccctccgtccc-taattataagacccttttgaggattttttttatccctttttataagacccctttg 23398107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 339
Target Start/End: Complemental strand, 231143 - 231105
Alignment:
Q  300 ttactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  231143 ttactccctccgtccc-taattataagacccttttgagaa 231105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 4844400 - 4844437
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  4844400 tactccctccgtccc-taattataagacccttttgagaa 4844437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 8743188 - 8743225
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  8743188 tactccctccgtccc-taattataagacccttttgagaa 8743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 11847872 - 11847835
Alignment:
Q  298 tattactccctccgtcccctaattataagacccttttga 336  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11847872 tattactccctccgtccc-taattataagacccttttga 11847835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 30248647 - 30248684
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  30248647 tactccctccgtccc-taattataagacccttttgagaa 30248684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 372
Target Start/End: Complemental strand, 925972 - 925900
Alignment:
Q  299 attactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    |||||||||||||| || |||||||||||||||||||||||         ||||||||||||||| ||||||||    
T  925972 attactccctccgttcc-taattataagacccttttgagaattttttttgtccctttttataagatccctttgc 925900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 17175194 - 17175237
Alignment:
Q  291 gagaatttattactccctccgtcccctaattataagacccttttg 335  Q
    |||||||||||||||||||||| |||||  |||||||||||||||    
T  17175194 gagaatttattactccctccgt-ccctatatataagacccttttg 17175237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 3433 - 3507
Alignment:
Q  296 tttattactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    ||||||||| |||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||||    
T  3433 tttattactacctccgtccc-taattataagacccttttgagaatttttttg-tccctttttataagacccctttgc 3507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 5146 - 5188
Alignment:
Q  296 tttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  5146 tttattactacctccgtccc-taattataagacccttttgagaa 5188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 372
Target Start/End: Complemental strand, 3819 - 3750
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaannnnnnnnatccctttttataagacccctttgc 372  Q
    ||||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||||    
T  3819 tactccctccgtccc-taattataagacccttttgagaatttttttg-tccctttttataagacccctttgc 3750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Complemental strand, 10224 - 10182
Alignment:
Q  296 tttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  10224 tttattactacctccgtccc-taattataagacccttttgagaa 10182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 339
Target Start/End: Original strand, 18492 - 18534
Alignment:
Q  296 tttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||| |||||||||| |||||||||||||||||||||||    
T  18492 tttattactacctccgtccc-taattataagacccttttgagaa 18534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 12065 - 12102
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  12065 tactccctccgtccc-taattataagacccttttgagaa 12102  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 51719 - 51682
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  51719 tactccctccgtccc-taattataagacccttttgagaa 51682  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Original strand, 47640 - 47677
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  47640 tactccctccgtccc-taattataagacccttttgagaa 47677  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 259159 - 259122
Alignment:
Q  301 tactccctccgtcccctaattataagacccttttgagaa 339  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  259159 tactccctccgtccc-taattataagacccttttgagaa 259122  T

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Target: scaffold0368 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 8213 - 8252
Alignment:
Q  296 tttattactccctccgtcccctaattataagacccttttga 336  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  8213 tttattactccctccgt-ccctaattgtaagacccttttga 8252  T

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Target: scaffold0339 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 7183 - 7140
Alignment:
Q  295 atttattactccctccgtcccctaattataagacccttttgagaa 339  Q
    |||| ||||| |||||||||| |||||||||||||||||||||||    
T  7183 attttttacttcctccgtccc-taattataagacccttttgagaa 7140  T

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