View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13612_low_18 (Length: 311)
Name: NF13612_low_18
Description: NF13612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13612_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 241
Target Start/End: Original strand, 28813847 - 28814083
Alignment:
| Q |
5 |
cacaatcagttataaattataaattctgattttgtttaacgttaatttcgctttttaataattgttttgtcatttaatcaactccatgatcactaatatt |
104 |
Q |
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| T |
28813847 |
cacaatcagttataaattataaattctgattttgtttaacgttaatttcgctttttaataattgttttgtcatttaatcaactccatgatcactaatatt |
28813946 |
T |
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| Q |
105 |
cactatcaaagtaaaaaatgaaaatagaaaccccataaatgacaagaataacatgtttgaaaaaatttaattgccgcacaaatgaaagaatatgcttgct |
204 |
Q |
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| T |
28813947 |
cactatcaaagtaaataatgaaaatagaaaccccataaatgacaaaaataacatgtttgaaaaaatttaattgccgcacaaatgaaagaaaatgcttgct |
28814046 |
T |
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| Q |
205 |
cgaaaatagagagtgctgattttatgcagacaaaaca |
241 |
Q |
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| T |
28814047 |
ccaaaatagagaatgctgattttatgcagacaaaaca |
28814083 |
T |
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