View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13614_low_11 (Length: 340)
Name: NF13614_low_11
Description: NF13614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13614_low_11 |
 | |
|
| [»] scaffold0038 (1 HSPs) |
| | |
|
| [»] scaffold0158 (1 HSPs) |
| | |
|
| [»] scaffold0046 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 87 - 322
Target Start/End: Original strand, 33295596 - 33295831
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33295596 |
gctattttggaaaatggattatggagttttggagctagtaaaagctgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
33295695 |
T |
|
| Q |
187 |
tttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagaccattttatgattacttgccttttgtgc |
286 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
33295696 |
tttagcttagaacccacctttggagatcgattatgattatgctacattattaagataacatgaataattagaccattttatgattacttgccttttgtac |
33295795 |
T |
|
| Q |
287 |
aaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
33295796 |
aaacatgtctgttatgccatatgaatggtacatttg |
33295831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 87 - 322
Target Start/End: Original strand, 29934012 - 29934248
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
29934012 |
gctattttggaaaatggattatggatttttggagctagcaaaagctgcaaattgtggataagctgcttgtaatttcgggactaatgccaaggtgagttcc |
29934111 |
T |
|
| Q |
187 |
tttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttttgtg |
285 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||| ||||||| | |||||||||||||||||||||| |||||||||| |||| |||||||| |
|
|
| T |
29934112 |
tttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataattagaccatttttatgatttcttgtcttttgtg |
29934211 |
T |
|
| Q |
286 |
caaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| |||| || ||||||||||||||| |||||||| |
|
|
| T |
29934212 |
caagcatgactactatgccatatgaatgatacatttg |
29934248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 97 - 322
Target Start/End: Original strand, 5249438 - 5249664
Alignment:
| Q |
97 |
aaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcctttagcttag |
196 |
Q |
| |
|
||||||||||||| || ||||||| || ||||| ||| ||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5249438 |
aaaatggattatgaagttttggagttaacaaaagctgaaaattatggataagctgcctgcaatctcgggactaatgccaaggtgagttcctttagcttag |
5249537 |
T |
|
| Q |
197 |
aacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttttgtgcaaacatgtc |
295 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||| ||||| |||| | |
|
|
| T |
5249538 |
aacccacctttggggatcgattatgaatatgttagattattgagataacatcaataattagaccatttttatgattacttgtcttttatgcaagcatgac |
5249637 |
T |
|
| Q |
296 |
tgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
| ||||||||||||||||||||||||| |
|
|
| T |
5249638 |
tattatgccatatgaatggtacatttg |
5249664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 87 - 322
Target Start/End: Complemental strand, 28223306 - 28223066
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
28223306 |
gctattttggaaaatggattatggagttttggagctagcaaaagctgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggagagttac |
28223207 |
T |
|
| Q |
187 |
t----ttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttt |
281 |
Q |
| |
|
| |||||||||||||||| ||||| |||| |||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
28223206 |
tttaattagcttagaacccacatttggggatcaattatgattatgttagattatcgagataacatgaataattagaccatttttatgattacttgccaat |
28223107 |
T |
|
| Q |
282 |
tgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||||||| ||| || | ||| ||||||||||||| ||||| |
|
|
| T |
28223106 |
tgtgcaagcataactatcatgtcatatgaatggtatatttg |
28223066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 170 - 322
Target Start/End: Complemental strand, 8520357 - 8520204
Alignment:
| Q |
170 |
atgccaaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatg |
268 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||| |||||||| ||||||||||||| ||||||| |
|
|
| T |
8520357 |
atgccaaggtgagttcctttagcttagaacgcacctttggggatcgattatgattaggttagattattgagataacataaataattagaccatttttatg |
8520258 |
T |
|
| Q |
269 |
attacttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| ||| ||||||||||| |||| || ||||||||||||||||||||||||| |
|
|
| T |
8520257 |
attttttgacttttgtgcaagcatgactattatgccatatgaatggtacatttg |
8520204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 169 - 322
Target Start/End: Original strand, 26619924 - 26620078
Alignment:
| Q |
169 |
aatgccaaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttat |
267 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
26619924 |
aatgctaaggtgagttcctttagcttagaacccacctttggggatcaattataattatgttagattattgagataacatgaataattagaccatttttat |
26620023 |
T |
|
| Q |
268 |
gattacttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||||||||||| |||||||| |||| || | || |||||||||||||||||||| |
|
|
| T |
26620024 |
gattacttgccgattgtgcaagcatgactatcataccatatgaatggtacatttg |
26620078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 169 - 322
Target Start/End: Original strand, 26725837 - 26725991
Alignment:
| Q |
169 |
aatgccaaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttat |
267 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
26725837 |
aatgctaaggtgagttcctttagcttagaacccacctttggggatcaattataattatgttagattattgagataacatgaataattagaccatttttat |
26725936 |
T |
|
| Q |
268 |
gattacttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||||||||||| |||||||| |||| || | || |||||||||||||||||||| |
|
|
| T |
26725937 |
gattacttgccgattgtgcaagcatgactatcataccatatgaatggtacatttg |
26725991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 175 - 322
Target Start/End: Original strand, 34255006 - 34255154
Alignment:
| Q |
175 |
aaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattac |
273 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||||| | |
|
|
| T |
34255006 |
aaggtgagttcctttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataattaggccatttttatgatttc |
34255105 |
T |
|
| Q |
274 |
ttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| ||||||||||| |||| || ||||||||||||||| |||||||| |
|
|
| T |
34255106 |
ttgtcttttgtgcaagcatgactactatgccatatgaatgatacatttg |
34255154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14023379 - 14023324
Alignment:
| Q |
1 |
tcgaaatgtgatttctccgatcaaatttggacgaacaaagttgtttgactatgata |
56 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14023379 |
tcgaaatgtgatttctccgatcaaatttggacgaacaaagttgtttgactatgata |
14023324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 28146315 - 28146263
Alignment:
| Q |
175 |
aaggtgagttcctttagcttagaacccacctttggagatcgattatgattatg |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
28146315 |
aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatg |
28146263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 5130521 - 5130577
Alignment:
| Q |
169 |
aatgccaaggtgagttcctttagcttagaacccacctttggagatcgattatgatta |
225 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||| ||||| |||| |||||||||| |
|
|
| T |
5130521 |
aatgctaaggtgagttcctttagcttagagcccacatttggggatcaattatgatta |
5130577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 5130569 - 5130627
Alignment:
| Q |
264 |
ttatgattacttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||||||||||||||| |||||||| |||| || | || |||||||||||||||||||| |
|
|
| T |
5130569 |
ttatgattacttgccgattgtgcaagcatgactatcataccatatgaatggtacatttg |
5130627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 28145613 - 28145540
Alignment:
| Q |
240 |
gataacatgaataattagacca-ttttatgattacttgccttttgtgcaaacatgtctgttatgccatatgaat |
312 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||| ||| |||||||| |||| || | ||||||||||||| |
|
|
| T |
28145613 |
gataacatgaataattagaccatttttagaattactcgccgattgtgcaagcatgactatcatgccatatgaat |
28145540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 87 - 322
Target Start/End: Original strand, 37368338 - 37368572
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
37368338 |
gctattttggaaaatggattatggagttttgga-ctagcaaaagctgcaaattttggataagctgcttgcaatttcgggactaattccaaggtgagttcc |
37368436 |
T |
|
| Q |
187 |
tttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagaccattttatgattacttgccttttgtgc |
286 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37368437 |
tttagctttgaacccacctttggagatcgattatgattatgctagattattaagataacatgaataattagaccattttatgattacttgccttttgtgc |
37368536 |
T |
|
| Q |
287 |
aaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37368537 |
aaacgtgtctgttatgccatatgaatggtacatttg |
37368572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 87 - 322
Target Start/End: Complemental strand, 41529235 - 41528999
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41529235 |
gctattttggaaaatggattatggagttttgaagctagcaaaagctgaaaattttggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
41529136 |
T |
|
| Q |
187 |
tttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttttgtg |
285 |
Q |
| |
|
||||| ||||||||||||||||| || ||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||||| |||| |||||||| |
|
|
| T |
41529135 |
tttagtttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataattaggccatttttatgatttcttgtcttttgtg |
41529036 |
T |
|
| Q |
286 |
caaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| |||| || |||| |||||||||| |||||||| |
|
|
| T |
41529035 |
caagcatgactactatgtcatatgaatgatacatttg |
41528999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 169; Significance: 1e-90; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 87 - 322
Target Start/End: Complemental strand, 4853235 - 4853000
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4853235 |
gctattttggaaaatggattatggagttttggagctagcaaaagctgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
4853136 |
T |
|
| Q |
187 |
tttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttttgtg |
285 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
4853135 |
tttagcttagaacccacctttggggatcaattatgattatgttagattattgagataacatgaataattagaccatttttatgattacttgccgattgtg |
4853036 |
T |
|
| Q |
286 |
caaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| |||| || | |||||| |||||||||||||||| |
|
|
| T |
4853035 |
caagcatgactatcatgcca-atgaatggtacatttg |
4853000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 87 - 322
Target Start/End: Original strand, 2894012 - 2894248
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
2894012 |
gctattttggaaaatggactatggagttttggagctagtaaaagctgcaaattgtggataagttgcttgtaatttcgggactaatgccaaggtgagttcc |
2894111 |
T |
|
| Q |
187 |
tttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttttgtg |
285 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||| ||||||| | |||||||||||||||||||||| |||||||||| |||| |||||||| |
|
|
| T |
2894112 |
tttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataattagaccatttttatgatttcttgtcttttgtg |
2894211 |
T |
|
| Q |
286 |
caaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| |||| || ||||||||||||||| |||||||| |
|
|
| T |
2894212 |
caagcatgactactatgccatatgaatgatacatttg |
2894248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 176 - 322
Target Start/End: Complemental strand, 14191064 - 14190917
Alignment:
| Q |
176 |
aggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattact |
274 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
14191064 |
aggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattgagataacatgaataattagaccatttttatgattact |
14190965 |
T |
|
| Q |
275 |
tgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||||||||||||| |||| || ||||||||||||||||||||||||| |
|
|
| T |
14190964 |
cgccttttgtgcaagcatgactattatgccatatgaatggtacatttg |
14190917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 169 - 322
Target Start/End: Complemental strand, 1506695 - 1506541
Alignment:
| Q |
169 |
aatgccaaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttat |
267 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
1506695 |
aatgctaaggtgagttcctttagcttagaacccacctttggggatcaattataattatgttagattattgagataacatgaataattagaccatttttat |
1506596 |
T |
|
| Q |
268 |
gattacttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||||||||||| |||||||| |||| || | || |||||||||||||||||||| |
|
|
| T |
1506595 |
gattacttgccgattgtgcaagcatgactatcataccatatgaatggtacatttg |
1506541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 175 - 265
Target Start/End: Original strand, 5577059 - 5577149
Alignment:
| Q |
175 |
aaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagaccatttt |
265 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
5577059 |
aaggtgagttcctttagcttagaatccacctttggggatcaattatgattatgttagattattgacataacatgaataattagaccatttt |
5577149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 169 - 293
Target Start/End: Complemental strand, 13713829 - 13713704
Alignment:
| Q |
169 |
aatgccaaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttat |
267 |
Q |
| |
|
||||| ||||||||||||||| ||||| ||||||||||||| |||| |||||||||||| ||||||||| ||||| ||||||||||| |||| |||||| |
|
|
| T |
13713829 |
aatgctaaggtgagttcctttcgcttataacccacctttggggatcaattatgattatgttagattattgagataatatgaataattaaaccatttttat |
13713730 |
T |
|
| Q |
268 |
gattacttgccttttgtgcaaacatg |
293 |
Q |
| |
|
|||||| |||| |||||||| |||| |
|
|
| T |
13713729 |
gattacctgccgattgtgcaagcatg |
13713704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 6734923 - 6734990
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgctt |
154 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| ||| | || |||||||||| ||||||||||||| |
|
|
| T |
6734923 |
gctattttggaaaaatgattatggagttttggagatagaagaagctgcaaattggggataagctgctt |
6734990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 161; Significance: 8e-86; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 87 - 322
Target Start/End: Complemental strand, 4341941 - 4341705
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4341941 |
gctattttggaaaatggattatggagttttggagctagcaaaagcttcaaattgtggataagttgcttgcaatttcgggactaatgccaaggtgagttcc |
4341842 |
T |
|
| Q |
187 |
tttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttttgtg |
285 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||| ||||||||| ||||| ||| |||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
4341841 |
tttagcttagaacccacctttggggatcaattatgattatgttagattattgagataatatggataattagaccatttttatgattacttgccgattgtg |
4341742 |
T |
|
| Q |
286 |
caaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| |||| || | ||||||||||||||||||||||| |
|
|
| T |
4341741 |
caagcatgactatcatgccatatgaatggtacatttg |
4341705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 86 - 322
Target Start/End: Original strand, 42785364 - 42785601
Alignment:
| Q |
86 |
tgctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttc |
185 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
42785364 |
tgctattttggaaaatggactatggagttttggagctagcaaaagctgcaaattgtggataagctgcttgtaatttcgggactaatgccaaggtgagttc |
42785463 |
T |
|
| Q |
186 |
ctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttttgt |
284 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||| ||||||| | |||||||||||||||||||||| |||||||||| |||| ||||||| |
|
|
| T |
42785464 |
ctttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataattagaccatttttatgatttcttgtcttttgt |
42785563 |
T |
|
| Q |
285 |
gcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
|||| |||| || ||||||||||||||| |||||||| |
|
|
| T |
42785564 |
gcaagcatgactactatgccatatgaatgatacatttg |
42785601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 175 - 322
Target Start/End: Complemental strand, 19803681 - 19803533
Alignment:
| Q |
175 |
aaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattac |
273 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||||| | |
|
|
| T |
19803681 |
aaggtgagttcctttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataattaggccatttttatgatttc |
19803582 |
T |
|
| Q |
274 |
ttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| ||||||||||| |||| || ||||||||||||||| |||||||| |
|
|
| T |
19803581 |
ttgtcttttgtgcaagcatgactactatgccatatgaatgatacatttg |
19803533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 180 - 322
Target Start/End: Original strand, 21958048 - 21958191
Alignment:
| Q |
180 |
gagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacc-attttatgattacttgcc |
278 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||| ||||||||||| || |||||| ||||||||||||||||||||| |||||||||| |||| | |
|
|
| T |
21958048 |
gagttcctttagcttagagcccacctttggggatcagttatgattatgttatattattgagataacatgaataattagaccttttttatgatttcttgtc |
21958147 |
T |
|
| Q |
279 |
ttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
|||||||||| |||| || |||||||||||||| |||||||||| |
|
|
| T |
21958148 |
ttttgtgcaagcatgactattatgccatatgaaaggtacatttg |
21958191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 3078223 - 3078295
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaat |
159 |
Q |
| |
|
|||||||||||||| |||||||||| ||| ||| ||| | || |||||||||||||||||||||||| |||| |
|
|
| T |
3078223 |
gctattttggaaaagtgattatggagttttagagatagaagaagctgcaaattgtggataagctgctttcaat |
3078295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 3081733 - 3081669
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctg |
151 |
Q |
| |
|
|||||||||||||| |||||||||| ||| ||| ||| | || ||||||||||||||||||||| |
|
|
| T |
3081733 |
gctattttggaaaagtgattatggagttttagagatagaagaagctgcaaattgtggataagctg |
3081669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 21957955 - 21958015
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataag |
148 |
Q |
| |
|
||||||||||||||||| ||||| || ||||||| |||||||| ||||| ||| |||||||| |
|
|
| T |
21957955 |
gctattttggaaaatgg-ttatgaagttttggagatagcaaaagctgcagattatggataag |
21958015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 157; Significance: 2e-83; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 87 - 322
Target Start/End: Original strand, 14114212 - 14114447
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14114212 |
gctattttggaaaatggattatggagttttggagctagcaaaagctgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
14114311 |
T |
|
| Q |
187 |
tttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttttgtg |
285 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||| |
|
|
| T |
14114312 |
tttagcttagaacccacctttggggatcaattatgattatgttagattattgagataacatgaacaattagaccatttttatgattactttccgattgtg |
14114411 |
T |
|
| Q |
286 |
caaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| |||| || | |||||| | |||||||||||||| |
|
|
| T |
14114412 |
caagcatgactatcatgcca-aggaatggtacatttg |
14114447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 322
Target Start/End: Complemental strand, 51844922 - 51844774
Alignment:
| Q |
175 |
aaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattaga-ccattttatgattac |
273 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||| || ||||||||||| |
|
|
| T |
51844922 |
aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataattagatcctctttatgattac |
51844823 |
T |
|
| Q |
274 |
ttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||||| |||||||| |||| || | ||||||||||||||||||||||| |
|
|
| T |
51844822 |
ttgccgattgtgcaagcatgactatcatgccatatgaatggtacatttg |
51844774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 15089076 - 15089004
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaat |
159 |
Q |
| |
|
|||||||||||||| |||||||||| ||| ||| ||| | || |||||||||||||||||| ||||| |||| |
|
|
| T |
15089076 |
gctattttggaaaagtgattatggagttttagagatagaagaagctgcaaattgtggataagttgctttcaat |
15089004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 22211684 - 22211612
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaat |
159 |
Q |
| |
|
|||||||||||||| |||||||||| ||| ||| ||| | || |||||||||||||||||| ||||| |||| |
|
|
| T |
22211684 |
gctattttggaaaagtgattatggagttttagagatagaagaagctgcaaattgtggataagttgctttcaat |
22211612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 145; Significance: 3e-76; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 87 - 322
Target Start/End: Original strand, 2742784 - 2743020
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
2742784 |
gctattttggaaaatggattatggatttttggagctagcaaaagctgcaaattgtggataagctgcttgaaatttcgggactaatgccaaggtgagttcc |
2742883 |
T |
|
| Q |
187 |
tttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttttgtg |
285 |
Q |
| |
|
||||||||||||||||||||||| || ||| ||||||||| ||| ||| | |||||||||||||||||||||| |||||||||| |||| |||||||| |
|
|
| T |
2742884 |
tttagcttagaacccacctttgggaatggatcatgattatgttagtttaatgagataacatgaataattagaccatttttatgatttcttgtcttttgtg |
2742983 |
T |
|
| Q |
286 |
caaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| |||| || ||||||||||||||| ||| |||| |
|
|
| T |
2742984 |
caagcatgactactatgccatatgaatgatacttttg |
2743020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 2696454 - 2696544
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaag |
177 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2696454 |
gctattttggaaaatggattatggagttttggagttagcaaaagctgaaaattgtgaataagctgcttgcaatttcgggactaatgccaag |
2696544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 141; Significance: 7e-74; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 87 - 322
Target Start/End: Complemental strand, 5558613 - 5558377
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5558613 |
gctattttggaaaatggattatggagttttgaagctagcaaaagctgaaaattttggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
5558514 |
T |
|
| Q |
187 |
tttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttttgtg |
285 |
Q |
| |
|
||||| ||||||||||||||||| || ||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||||| |||| |||||||| |
|
|
| T |
5558513 |
tttagtttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataattaggccatttttatgatttcttgtcttttgtg |
5558414 |
T |
|
| Q |
286 |
caaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| |||| || |||| |||||||||| |||||||| |
|
|
| T |
5558413 |
caagcatgactactatgtcatatgaatgatacatttg |
5558377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 322
Target Start/End: Original strand, 20809915 - 20810075
Alignment:
| Q |
175 |
aaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattatta------------cgataacatgaataattagacca- |
261 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
20809915 |
aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatgttagattattatgttagatattgagataacatgaataattagaccat |
20810014 |
T |
|
| Q |
262 |
ttttatgattacttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
|||||||||||| |||| |||||||| |||| || | ||||||||||||||||||||||| |
|
|
| T |
20810015 |
ttttatgattacctgccgattgtgcaagcatgactatcatgccatatgaatggtacatttg |
20810075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 136; Significance: 7e-71; HSPs: 1)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 87 - 322
Target Start/End: Complemental strand, 23804 - 23564
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggtgagttcc |
186 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
23804 |
gctattttggaaaatggattatggagttttggagctagcaaaagctgcaaattgtggataagctgcttgcaatttcgggactaatgccaaggagagttac |
23705 |
T |
|
| Q |
187 |
t----ttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattacttgccttt |
281 |
Q |
| |
|
| |||||||||||||||| ||||| |||| |||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
23704 |
tttaattagcttagaacccacatttggggatcaattatgattatgttagattatcgagataacatgaataattagaccatttttatgattacttgccaat |
23605 |
T |
|
| Q |
282 |
tgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||||||| ||| || | ||| ||||||||||||| ||||| |
|
|
| T |
23604 |
tgtgcaagcataactatcatgtcatatgaatggtatatttg |
23564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 175 - 322
Target Start/End: Original strand, 14530141 - 14530289
Alignment:
| Q |
175 |
aaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattac |
273 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||||| | |
|
|
| T |
14530141 |
aaggtgagttcctttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataattaggccatttttatgatttc |
14530240 |
T |
|
| Q |
274 |
ttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| ||||||||||| |||| || ||||||||||||||| |||||||| |
|
|
| T |
14530241 |
ttgtcttttgtgcaagcatgactactatgccatatgaatgatacatttg |
14530289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 28035263 - 28035190
Alignment:
| Q |
87 |
gctattttggaaaatggattatggaggtttggagctagcaaaaactgcaaattgtggataagctgcttgcaatt |
160 |
Q |
| |
|
|||||||| ||||| ||||| |||| |||| || |||| || |||||||||||||||||||||||||||||| |
|
|
| T |
28035263 |
gctattttcgaaaagtgattacggagttttgtagaaagcagaagctgcaaattgtggataagctgcttgcaatt |
28035190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0158 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0158
Description:
Target: scaffold0158; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 322
Target Start/End: Original strand, 26259 - 26407
Alignment:
| Q |
175 |
aaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattacgataacatgaataattagacca-ttttatgattac |
273 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| || ||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||||| | |
|
|
| T |
26259 |
aaggtgagttcctttagcttagaacccgcctttgggaatggattatgattatgttagattaatgagataacatgaataattaggccatttttatgatttc |
26358 |
T |
|
| Q |
274 |
ttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
||| ||||||||||| |||| || ||||||||||||||| |||||||| |
|
|
| T |
26359 |
ttgtcttttgtgcaagcatgactactatgccatatgaatgatacatttg |
26407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 91062 - 90990
Alignment:
| Q |
250 |
ataattagaccatttt-atgattacttgccttttgtgcaaacatgtctgttatgccatatgaatggtacatttg |
322 |
Q |
| |
|
|||||||||||||||| ||||| | || | |||||||||| ||| || ||||||||||||||||||||||||| |
|
|
| T |
91062 |
ataattagaccatttttatgataattttc-ttttgtgcaagcattcctattatgccatatgaatggtacatttg |
90990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University