View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13614_low_6 (Length: 535)
Name: NF13614_low_6
Description: NF13614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13614_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 475; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 19 - 526
Target Start/End: Original strand, 45068561 - 45069068
Alignment:
| Q |
19 |
agttctatgtagcaagttcagagttcgatccctgcgacaaacatttctccctcctcttaactaattaatcactaacatttgcctatnnnnnnngaatatc |
118 |
Q |
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| T |
45068561 |
agttctatgtagcaagttcagagttcgatccctgcgacaaacatttctccctccccttaactaattaatcactaacatttgcctataaaaaaagaatatc |
45068660 |
T |
|
| Q |
119 |
aacaattaatgttaaaagaaattgtatttggtcaatactcaatgacaagttctgttttgatgagtgatgagttcgtgctacttgtaggccaatgttttgt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068661 |
aacaattaatgttaaaagaaattgtatttggtcaatactcaatgacaagttctgttttgatgagtgatgagttcgtgctacttgtaggccaatgttttgt |
45068760 |
T |
|
| Q |
219 |
ctcttgttctaagtggagaatcatcaccatgaatgaggccaaaaccaattgcattgattgttcaaatcaatgcactggaagggaaaggggttactgtgtg |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
45068761 |
ctcttgttctaagtggagaatcatcaccatgaatgaggccaaaaccaattgcattgattgttcaaatcaatgcactggaagggaaaggggttactgtgag |
45068860 |
T |
|
| Q |
319 |
tgtgaagtgcccttatcggcaataccttagttcaaggaaggaatattgattttctgcttctcaatgtgacttctctttttcttacataatcatttaagtg |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068861 |
tgtgaagtgcccttatcggcaataccttagttcaaggaaggaatattgattttctgcttctcaatgtgacttctctttttcttacataatcatttaagtg |
45068960 |
T |
|
| Q |
419 |
gcccctttcttttctctttattacttgcaatttaagccacaaatacggttgctaaagcattcaagggctaattattaattatcagtagcttatttaccac |
518 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068961 |
gcccctttcttttctctttattacttgcaatttaagccacaaatacggttgctaaagcattcaagggctaattattaattatcagtagcttatttaccac |
45069060 |
T |
|
| Q |
519 |
aggttctg |
526 |
Q |
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| T |
45069061 |
atgttctg |
45069068 |
T |
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