View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13617_low_1 (Length: 728)

Name: NF13617_low_1
Description: NF13617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13617_low_1
NF13617_low_1
[»] chr5 (9 HSPs)
chr5 (19-715)||(11640483-11641179)
chr5 (182-715)||(11622153-11622688)
chr5 (323-586)||(11604902-11605165)
chr5 (233-316)||(12686617-12686700)
chr5 (233-316)||(12692719-12692802)
chr5 (233-316)||(32094660-32094743)
chr5 (238-316)||(19060217-19060295)
chr5 (255-316)||(20499776-20499837)
chr5 (238-296)||(22647931-22647989)
[»] chr8 (9 HSPs)
chr8 (233-316)||(9934921-9935004)
chr8 (233-316)||(32896650-32896733)
chr8 (229-316)||(5542596-5542683)
chr8 (233-316)||(32890526-32890609)
chr8 (233-316)||(36818610-36818693)
chr8 (233-316)||(42993438-42993521)
chr8 (218-316)||(10705476-10705573)
chr8 (218-316)||(42033435-42033532)
chr8 (218-316)||(10699667-10699764)
[»] scaffold0208 (2 HSPs)
scaffold0208 (233-316)||(12033-12116)
scaffold0208 (233-285)||(6191-6243)
[»] chr7 (2 HSPs)
chr7 (233-316)||(28421397-28421480)
chr7 (233-285)||(5979614-5979666)
[»] chr6 (5 HSPs)
chr6 (233-316)||(4580760-4580843)
chr6 (229-316)||(21191305-21191392)
chr6 (241-316)||(25353851-25353926)
chr6 (238-316)||(12801982-12802060)
chr6 (218-316)||(21770989-21771086)
[»] chr3 (9 HSPs)
chr3 (233-316)||(11840164-11840247)
chr3 (233-316)||(26429856-26429939)
chr3 (233-316)||(42191659-42191742)
chr3 (233-316)||(42197601-42197684)
chr3 (218-286)||(46656348-46656415)
chr3 (233-316)||(10238651-10238734)
chr3 (233-316)||(10244773-10244856)
chr3 (233-316)||(17056230-17056313)
chr3 (233-316)||(17601972-17602055)
[»] chr2 (8 HSPs)
chr2 (233-316)||(13455737-13455820)
chr2 (233-316)||(13461678-13461761)
chr2 (233-316)||(35085118-35085201)
chr2 (233-316)||(35091091-35091174)
chr2 (233-316)||(36750052-36750135)
chr2 (218-316)||(7771611-7771708)
chr2 (246-316)||(23283881-23283951)
chr2 (238-316)||(23343201-23343279)
[»] chr1 (9 HSPs)
chr1 (233-316)||(25275485-25275568)
chr1 (233-316)||(25381974-25382057)
chr1 (233-316)||(50305835-50305918)
chr1 (218-316)||(27954799-27954896)
chr1 (233-316)||(1077882-1077965)
chr1 (258-316)||(24927232-24927290)
chr1 (238-316)||(24964148-24964226)
chr1 (233-285)||(25387941-25387993)
chr1 (218-316)||(44409638-44409735)
[»] chr4 (6 HSPs)
chr4 (218-316)||(6257629-6257726)
chr4 (233-316)||(24287625-24287708)
chr4 (218-316)||(26971979-26972076)
chr4 (241-316)||(49976239-49976314)
chr4 (238-316)||(4632013-4632091)
chr4 (218-316)||(50168233-50168330)


Alignment Details
Target: chr5 (Bit Score: 669; Significance: 0; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 669; E-Value: 0
Query Start/End: Original strand, 19 - 715
Target Start/End: Original strand, 11640483 - 11641179
Alignment:
Q  19 gaacacctaccggttagtgcttctccctcaactggaacttatatgcttttcagatggggataagaggcaaggaaggtgcattatttccagtatattggat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11640483 gaacacctaccggttagtgcttctccctcaactggaacttatatgctcttcagatggggataagaggcaaggaaggtgcattatttccattatattggat 11640582  T
Q  119 atcatagcctatatattaagtgatggccaattgtgtttctgttattccaagacatcacattagtaatattcactcatatttgaatccatataaactagtt 218  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11640583 atcatagcctatatattaagtgatggccaattgtggttctgttattccaagacatcacattagtaatattcactcatatttgaatccatataaactagtt 11640682  T
Q  219 atttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatttt 318  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11640683 atttaattcattattaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatttt 11640782  T
Q  319 aaataaatattccaacaggtgatgcccttttgctggaggaagctgatttagttggaattgaacaaccaaagaagcagctctgtgatttgcttttcaaaga 418  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11640783 aaataaatattccaacaggtgatgcccttttgctggaggaagctgatttagttggaattgaacatccaaagaagcagctctgtgatttgcttttcaaaga 11640882  T
Q  419 tgaatcaaatagggcagtgatttccatttatggtatgggaggtttagggaagacaacaatagcaaaacaagtctatgatgatccaaaagtcaagaagcgt 518  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11640883 tgaatcaaatagggctgtgatttccatttatggtatgggaggtttagggaagacaacaatagcaaaacaagtctatgatgatccaaaagtcaagaagcgt 11640982  T
Q  519 tttaggattcatgcttgggttaatctctctcaatctttcaaaatggaagagttgcttaaagaccttgttgaacagattcatattctcatcggaaaaccag 618  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11640983 tttaggattcatgcttgggttaatctctctcaatctttcaaaatggaagagttgcttaaagaccttgttgaacagattcatattctcatcggaaaaccag 11641082  T
Q  619 ttccagaagcagttgaaaggatgaaaagtgacaagctgaaagagttgattaaggatttgcttcagagaagcaggtacctaattgtgcttgatgatgt 715  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11641083 ttccagaagcagttgaaaggatgaaaagtgacaagctgaaagagttgattaaggatttgcttcagagaagcaggtacctaattgtgcttgatgatgt 11641179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 182 - 715
Target Start/End: Original strand, 11622153 - 11622688
Alignment:
Q  182 taatattcactcatatttgaatccatataaactagttatttga-ttcattatcaaattagaaatataattagctttattacataatttgataactaatca 280  Q
    ||||||||||||||| || | ||||||||||  | |||||| | || | |||||||||||||||||||||| |||||||||||| |||||||| ||||||    
T  11622153 taatattcactcatactttagtccatataaaaaaattattttaatttagtatcaaattagaaatataattaactttattacatagtttgataattaatca 11622252  T
Q  281 attaaaactc-ctaattgttaaatagctattataattttaaataaatattccaacaggtgatgcccttttgctggaggaagctgatttagttggaattga 379  Q
    |||||||||  || |||| |||||||||| |||| ||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11622253 attaaaactttctgattgataaatagctaatatatttttaaatatatactccaacaggtgatgcccttttgctagaggaagctgatttagttggaattga 11622352  T
Q  380 acaaccaaagaagcagctctgtgatttgcttttcaaagatgaatcaaatagggcagtgatttccatttatggtatgggaggtttagggaagacaacaata 479  Q
     |||||||||||||||||   ||||||||||||||||||||||||||| || | ||||||||| || |||||||||||||||||||||||||||||| |     
T  11622353 tcaaccaaagaagcagctgactgatttgcttttcaaagatgaatcaaagagagaagtgatttcgatctatggtatgggaggtttagggaagacaacattg 11622452  T
Q  480 gcaaaacaagtctatgatgatccaaaagtcaagaagcgttttaggattcatgcttgggttaatctctctcaatctttcaaaatggaagagttgcttaaag 579  Q
    ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| |||||||||||||| | || ||||    
T  11622453 gcaaaacaagtttatgatgatccaaaagtcaagaaacgtttcaggattcatgcttgggttaatctctcccaatctatcaaaatggaagagatactgaaag 11622552  T
Q  580 accttgttgaacagattcatattctcatcggaaaaccagttccagaagcagttgaaaggatgaaaagtgacaagctgaaagagttgattaaggatttgct 679  Q
    |||||||  || |  | |||| | |  | |||||||| | ||||| | || ||| || |||||| | |||| | |||||||||||||| ||| |||||||    
T  11622553 accttgtacaaaaactccataatgtttttggaaaacctgctccaggatcaattggaacgatgaataatgacgatctgaaagagttgataaagaatttgct 11622652  T
Q  680 tcagagaagcaggtacctaattgtgcttgatgatgt 715  Q
    ||||||||||||||| |||||||| |||||||||||    
T  11622653 tcagagaagcaggtatctaattgttcttgatgatgt 11622688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 323 - 586
Target Start/End: Complemental strand, 11605165 - 11604902
Alignment:
Q  323 aaatattccaacaggtgatgcccttttgctggaggaagctgatttagttggaattgaacaaccaaagaagcagctctgtgatttgcttttcaaagatgaa 422  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  11605165 aaatattccaacaggtgatgcccttttgctagatgaagctgatttagttggaattgatcaaccaaagaagcagctgtgtgatttgcttttcaatgatgaa 11605066  T
Q  423 tcaaatagggcagtgatttccatttatggtatgggaggtttagggaagacaacaatagcaaaacaagtctatgatgatccaaaagtcaagaagcgtttta 522  Q
     |||| || | ||||||||| || |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | ||| |    
T  11605065 ccaaagagagaagtgatttcaatctatggtatgggaggtttagggaagacaacattggcaaaacaagtctatgatgatccaaaagtcaagaaacatttca 11604966  T
Q  523 ggattcatgcttgggttaatctctctcaatctttcaaaatggaagagttgcttaaagaccttgt 586  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| | || |||||||||||    
T  11604965 ggattcatgcttgggttaatctctcccaatctatcaaaatggaagagatactgaaagaccttgt 11604902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 12686617 - 12686700
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  12686617 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 12686700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 12692719 - 12692802
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  12692719 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 12692802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 32094660 - 32094743
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| ||||||| || |||||||    
T  32094660 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagttaatataatt 32094743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 19060217 - 19060295
Alignment:
Q  238 tagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||||| |||| ||| ||||||| ||||||||| |||||||||||||  |||| |||||  ||||||||| |||||||    
T  19060217 tagaaatctaataagccttattacttaatttgatcactaatcaattaagtctccaaattgacaaatagctaatataatt 19060295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 20499837 - 20499776
Alignment:
Q  255 ttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||||| ||||||||| ||||||||||||| ||||  ||||| |||||||||| |||||||    
T  20499837 ttattacttaatttgatcactaatcaattaagactcacaattgataaatagctaatataatt 20499776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 22647931 - 22647989
Alignment:
Q  238 tagaaatataattagctttattacataatttgataactaatcaattaaaactcctaatt 296  Q
    ||||||| |||||||  ||||||| |||||||||||||||| |||||| ||||| ||||    
T  22647931 tagaaatctaattagtcttattacttaatttgataactaattaattaagactccaaatt 22647989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 9935004 - 9934921
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||  ||||| |||||| ||| |||||||    
T  9935004 caaaatagaaatctaattagctttattacttaatttgatcactaatcaattaagactcacaattgataaataactaatataatt 9934921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 32896733 - 32896650
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  32896733 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 32896650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 229 - 316
Target Start/End: Original strand, 5542596 - 5542683
Alignment:
Q  229 ttatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| |||||||||| |||||||  ||||||| ||||||||| |||||||||||||  |||  ||||| |||||| ||| |||||||    
T  5542596 ttatccaattagaaatctaattagtcttattacttaatttgatcactaatcaattaaggctctaaattgataaataactaatataatt 5542683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 32890609 - 32890526
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||   ||  ||||| |||||||||| |||||||    
T  32890609 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaagggtcacaattgataaatagctaatataatt 32890526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 36818693 - 36818610
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||| | ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  36818693 caaaatagaaatctaattaaccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 36818610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 42993438 - 42993521
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||| ||| |||||||    
T  42993438 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaataactaatataatt 42993521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 10705573 - 10705476
Alignment:
Q  218 tatttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| ||| |||||  |||||||||| |||| || |||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  10705573 tatttaattaattattcaattagaaatctaat-agttttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 10705476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 42033532 - 42033435
Alignment:
Q  218 tatttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| ||| |||||| |||||||||| |||| | ||| ||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  42033532 tatttaattaattatctaattagaaatctaataacctt-attacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 42033435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 10699764 - 10699667
Alignment:
Q  218 tatttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| ||| |||||| |||||||||| |||| ||| | ||||| ||||||||| |||||||||||||  |||  ||||| |||||| ||| |||||||    
T  10699764 tatttaattaattatccaattagaaatctaat-agcctaattacttaatttgatcactaatcaattaaggctcacaattgataaataactagtataatt 10699667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 12116 - 12033
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  12116 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 12033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 6243 - 6191
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaa 285  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||    
T  6243 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaa 6191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 28421397 - 28421480
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  28421397 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 28421480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 5979614 - 5979666
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaa 285  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||    
T  5979614 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaa 5979666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 4580760 - 4580843
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  4580760 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 4580843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 229 - 316
Target Start/End: Original strand, 21191305 - 21191392
Alignment:
Q  229 ttatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| |||||||||| ||||||||  |||||| ||||||||| |||||||||||||  |||  ||||| |||||| ||| |||||||    
T  21191305 ttatccaattagaaatctaattagccatattacttaatttgatcactaatcaattaaggctctaaattgataaataactaatataatt 21191392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 25353926 - 25353851
Alignment:
Q  241 aaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  25353926 aaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 25353851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 12801982 - 12802060
Alignment:
Q  238 tagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||||| |||| ||||||||||| ||| ||||| |||||||||||||  |||| |||||  ||||||||| |||||||    
T  12801982 tagaaatctaataagctttattacttaaattgatcactaatcaattaaggctccaaattgacaaatagctaatataatt 12802060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 21770989 - 21771086
Alignment:
Q  218 tatttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| ||| |||||  |||||||||| |||| || |||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  21770989 tatttaattaattattcaattagaaatctaat-agttttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 21771086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 11840164 - 11840247
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  11840164 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 11840247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 26429856 - 26429939
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  26429856 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 26429939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 42191659 - 42191742
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  42191659 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 42191742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 42197601 - 42197684
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  42197601 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 42197684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 46656415 - 46656348
Alignment:
Q  218 tatttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaa 286  Q
    ||||| ||| |||||| |||||||||| |||| ||||||||||| ||||||||| ||||||||||||||    
T  46656415 tatttaattaattatccaattagaaatctaat-agctttattacttaatttgatcactaatcaattaaa 46656348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 10238651 - 10238734
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||  |||||||||||||  |||  ||||| |||||||||| |||||||    
T  10238651 caaaatagaaatctaattagccttattacttaatttgaacactaatcaattaaggctcacaattgataaatagctaatataatt 10238734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 10244773 - 10244856
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||  |||||||||||||  |||  ||||| |||||||||| |||||||    
T  10244773 caaaatagaaatctaattagccttattacttaatttgaacactaatcaattaaggctcacaattgataaatagctaatataatt 10244856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 17056230 - 17056313
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| ||||||| || |||||||    
T  17056230 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagataatataatt 17056313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 17601972 - 17602055
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||  |||||||||||||  |||  ||||| |||||| ||| |||||||    
T  17601972 caaaatagaaatctaattagccttattacttaatttgaccactaatcaattaaggctctaaattgataaataactaatataatt 17602055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 13455820 - 13455737
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  13455820 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 13455737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 13461761 - 13461678
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  13461761 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 13461678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 35085118 - 35085201
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  35085118 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 35085201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 35091091 - 35091174
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  35091091 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 35091174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 36750135 - 36750052
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  36750135 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 36750052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 7771611 - 7771708
Alignment:
Q  218 tatttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| ||| |||||| |||||||||| |||| ||||||||||| ||||||||| | ||||||| ||| |||   ||||| |||||||||| |||||||    
T  7771611 tatttaattaattatccaattagaaatctaat-agctttattacttaatttgatcagtaatcaactaagacttacaattgataaatagctaatataatt 7771708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 23283951 - 23283881
Alignment:
Q  246 taattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||| ||||||| ||||||||| ||||||||||||| ||||| ||||| |||||| ||| |||||||    
T  23283951 taataagccttattacttaatttgatcactaatcaattaagactccaaattgataaataactaatataatt 23283881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 23343279 - 23343201
Alignment:
Q  238 tagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||||| |||| ||| ||||||| ||||||||| |||||||||||||  |||| ||||| ||||||| || |||||||    
T  23343279 tagaaatctaataagccttattacttaatttgatcactaatcaattaaggctccaaattgataaatagttaatataatt 23343201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 25275485 - 25275568
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  25275485 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 25275568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 25381974 - 25382057
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  25381974 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 25382057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 50305918 - 50305835
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  50305918 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 50305835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 27954896 - 27954799
Alignment:
Q  218 tatttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| ||| ||||||||||||||||| |||| ||| ||||||| ||||||||| |||||||||||||  |||  ||||| |||||| ||| |||||||    
T  27954896 tatttaattaattatcaaattagaaatctaat-agccttattacttaatttgatcactaatcaattaagcctcacaattgataaataactaatataatt 27954799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 1077965 - 1077882
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||  ||||||| ||||||||| |||||||||||||  |||  ||||| |||||||||| |||||||    
T  1077965 caaaatagaaatctaattagtcttattacttaatttgatcactaatcaattaaggctcacaattgataaatagctaatataatt 1077882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 24927232 - 24927290
Alignment:
Q  258 ttacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||||| ||||||||||||| ||||| ||||| |||||||||| |||||||    
T  24927232 ttacttaatttgatcactaatcaattaagactccaaattgataaatagctaatataatt 24927290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 24964148 - 24964226
Alignment:
Q  238 tagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||||| | || ||||||||||| ||||||||| |||||||||||||  || | ||||| |||||||||| |||||||    
T  24964148 tagaaatcttataagctttattacttaatttgatcactaatcaattaaggcttcaaattgataaatagctaatataatt 24964226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 25387941 - 25387993
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaa 285  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||    
T  25387941 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaa 25387993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 44409735 - 44409638
Alignment:
Q  218 tatttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| ||| |||||| |||||||||  |||| ||| ||||||| |||||| || |||||||||||||  |||  ||||| |||||||||| |||||||    
T  44409735 tatttaattaattatccaattagaaacctaat-agccttattacctaatttaatcactaatcaattaaggctcacaattgataaatagctaatataatt 44409638  T

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Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 6257629 - 6257726
Alignment:
Q  218 tatttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| ||| |||||| |||||||||| |||| ||||||||||| ||||||||| ||||||||| |||  |||  ||||| |||||||||| |||||||    
T  6257629 tatttaattaattatccaattagaaatctaat-agctttattacttaatttgatcactaatcaactaaggctcacaattgataaatagctaatataatt 6257726  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 233 - 316
Target Start/End: Complemental strand, 24287708 - 24287625
Alignment:
Q  233 caaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| ||||||| |||||||| ||||||| ||||||||| |||||||||||||  |||  ||||  |||||||||| |||||||    
T  24287708 caaaatagaaatctaattagccttattacttaatttgatcactaatcaattaaggctcacaatttataaatagctaatataatt 24287625  T

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Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 218 - 316
Target Start/End: Original strand, 26971979 - 26972076
Alignment:
Q  218 tatttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| ||| |||||| |||||||||| |||| | | |||| || ||||||||| ||||||||||||| ||||  ||||| |||||||||| |||||||    
T  26971979 tatttaattaattatccaattagaaatctaat-atccttatcacttaatttgatcactaatcaattaagactcacaattgataaatagctaatataatt 26972076  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 49976314 - 49976239
Alignment:
Q  241 aaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    |||| |||| ||| ||||||| ||||||||| |||||||||||||  |||| ||||  |||||||||| |||||||    
T  49976314 aaatctaataagccttattacttaatttgatcactaatcaattaaggctccaaattaataaatagctaatataatt 49976239  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 4632091 - 4632013
Alignment:
Q  238 tagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||||| |||| | | ||||||| ||||||||| ||||||||||||| ||| | ||||| |||||| ||| |||||||    
T  4632091 tagaaatctaataaaccttattacttaatttgattactaatcaattaagacttcaaattgataaataactaatataatt 4632013  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 50168330 - 50168233
Alignment:
Q  218 tatttgattcattatcaaattagaaatataattagctttattacataatttgataactaatcaattaaaactcctaattgttaaatagctattataatt 316  Q
    ||||| ||| |||||| |||||||||| |||| ||| || |||| | ||||||  ||||||||||||| ||||  ||||| |||||||||| |||||||    
T  50168330 tatttaattaattatccaattagaaatctaat-agccttgttacttgatttgaccactaatcaattaagactcacaattgataaatagctaatataatt 50168233  T

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