View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13619_low_3 (Length: 382)
Name: NF13619_low_3
Description: NF13619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13619_low_3 |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 243; Significance: 1e-134; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 15 - 373
Target Start/End: Complemental strand, 14534002 - 14533644
Alignment:
| Q |
15 |
aagaagcaccattggatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtat |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |
|
|
| T |
14534002 |
aagaagcaccattggatagaaaaaattgaaactttggcaataaccttttgtggggttgtgatgaaagtaaccaaggtgccttttggatgatgatgcgtat |
14533903 |
T |
 |
| Q |
115 |
gtcagagtgtgaaaaaccatggttttgaaagaagttgatgactgagtcaggcttatctggggtattgaaacgaacttgcctgaggttgaaagctttgaga |
214 |
Q |
| |
|
|| |||| || |||||||||||||||||||||| |||| || || |||| ||||||||||||||||||||||| ||| || |||||||||||||||| |
|
|
| T |
14533902 |
gttggagtttggaaaaccatggttttgaaagaaggtgataacagaatcagcattatctggggtattgaaacgaacctgcttgttgttgaaagctttgaga |
14533803 |
T |
 |
| Q |
215 |
gctgattcagttgagaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgtgtttgattctgaagtggctgttatggtgcagaaacttctgg |
314 |
Q |
| |
|
|| |||||| |||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14533802 |
gcagattcatgtgagaatccaaaattgttgatgaggtatgatacagagaatggatgtgtgtttgattctgaagtggctgttatggtgcagaaacgtctgg |
14533703 |
T |
 |
| Q |
315 |
gtgaaattgggaattggtgcaaaagagggttgttgaattttgaggttgttgatattgtt |
373 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
14533702 |
gtgaaattgggaattggtgcaaaagagggttgttgaattttggggttgttgattttgtt |
14533644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 15 - 285
Target Start/End: Complemental strand, 15013250 - 15012980
Alignment:
| Q |
15 |
aagaagcaccattggatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtat |
114 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
15013250 |
aagaagcaccgttggatataaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgcttttttgatgatgatgcgtat |
15013151 |
T |
 |
| Q |
115 |
gtcagagtgtgaaaaaccatggttttgaaagaagttgatgactgagtcaggcttatctggggtattgaaacgaacttgcctgaggttgaaagctttgaga |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15013150 |
gtcagagtgtgaaaaaccatggttttgaaagaagttgatgactgagtcaggattatctggggtattgaaacgaacttgcctgaggttgaaagctttgaga |
15013051 |
T |
 |
| Q |
215 |
gctgattcagttgagaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgtgtttgattctga |
285 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||| || |||||||| || || |||||| |||||||||| |
|
|
| T |
15013050 |
gctgattcagttgagaaatcaaaattgttgataagataagatacagcaaaaggttgtgtgattgattctga |
15012980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 15 - 285
Target Start/End: Complemental strand, 31969167 - 31968897
Alignment:
| Q |
15 |
aagaagcaccattggatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtat |
114 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
31969167 |
aagaagcaccattggatataaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgcttttttgatgaagatgcgtat |
31969068 |
T |
 |
| Q |
115 |
gtcagagtgtgaaaaaccatggttttgaaagaagttgatgactgagtcaggcttatctggggtattgaaacgaacttgcctgaggttgaaagctttgaga |
214 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |||| || || ||||| ||||||| ||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
31969067 |
gtcagagtttgaaaaaccatggttttgaaagaaggtgataacagaatcaggattatctgaggtattgaaacgaacctgcttgaggttgaaagctttgaga |
31968968 |
T |
 |
| Q |
215 |
gctgattcagttgagaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgtgtttgattctga |
285 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||| || |||||||| || || |||||| |||||||||| |
|
|
| T |
31968967 |
gctgattcagttgagaaatcaaaattgttgataagataagatacagcaaaaggttgtgtgattgattctga |
31968897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 15004193 - 15004451
Alignment:
| Q |
15 |
aagaagcaccattggatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtat |
114 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| | |||||| | |||||||||||| |||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
15004193 |
aagaagcacctttggatagaaaaaattgaaactttgacaataaacctttgtggggttgcgatgaaagtaaccaaggtgcttttgtgatgatgatgcgtat |
15004292 |
T |
 |
| Q |
115 |
gtcagagtgtgaaaaaccatggttttgaaagaagttgatgactgagtcaggcttatctggggtattgaaacgaacttgcctgaggttgaaagctttgaga |
214 |
Q |
| |
|
|| | | ||||||||||||| |||||||||||| |||| || || ||||| ||||||||||||||||||||||| ||| || |||||||||||||||| |
|
|
| T |
15004293 |
gttatcgagtgaaaaaccatgattttgaaagaaggtgataacagaatcaggattatctggggtattgaaacgaacctgcttgttgttgaaagctttgaga |
15004392 |
T |
 |
| Q |
215 |
gctgattcagttgagaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgt |
273 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15004393 |
gttgattcagttgagaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgt |
15004451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 29 - 285
Target Start/End: Complemental strand, 15019728 - 15019472
Alignment:
| Q |
29 |
gatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtatgtcagagtgtgaaa |
128 |
Q |
| |
|
|||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||| |||| ||||| |
|
|
| T |
15019728 |
gatagaaagaattgaaactttggcaataacattttgtggggttgtgatgaaagtaaccaaggtgcttttttgatgatgatgcgaatgttggagtttgaaa |
15019629 |
T |
 |
| Q |
129 |
aaccatggttttgaaagaagttgatgactgagtcaggcttatctggggtattgaaacgaacttgcctgaggttgaaagctttgagagctgattcagttga |
228 |
Q |
| |
|
| |||| | ||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15019628 |
agccatagctttttaagaagttgatgactgagtcaggcctatctggggtattgaaacgaacgtgcctgaggttgaaagctttgagagctgattcagttga |
15019529 |
T |
 |
| Q |
229 |
gaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgtgtttgattctga |
285 |
Q |
| |
|
|||| |||||||||||| ||| || |||||||| || || |||||| |||||||||| |
|
|
| T |
15019528 |
gaaatcaaaattgttgataagataagatacagcaaaaggttgtgtgattgattctga |
15019472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 15 - 365
Target Start/End: Complemental strand, 14528768 - 14528409
Alignment:
| Q |
15 |
aagaagcaccattggatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtat |
114 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |
|
|
| T |
14528768 |
aagaagcagcattggatagaaaaaattgaaactttggcaaaaaccttttgtggggttgtgatgaaagtaaccatggtgctcttctgatcatgatgcgtat |
14528669 |
T |
 |
| Q |
115 |
gtcagagtgtgaaaaaccatggttttgaaagaagttgatgactgagtcaggcttatctggggtattgaaacgaacttgcctgaggttgaaagctttgaga |
214 |
Q |
| |
|
|| ||||||||| ||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
14528668 |
gttgtcgtgtgaaaagccatgattttgaaagaaggtgatgactgaatcaggtttatctgcggtattgaaacgaacttgcttgaggttgaaagctttgaga |
14528569 |
T |
 |
| Q |
215 |
gctgattcagttgagaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgtgtttgattctgaagtggctgttatggtgcagaaacttctgg |
314 |
Q |
| |
|
|| |||||| |||||| ||||||||||||| || || ||| |||||||||| |||||| |||||| || | |||| |||||||||| ||| || |
|
|
| T |
14528568 |
gcagattcatgtgagaacccaaaattgttgatgagataagatgcagcgaatggatgtgtgactgattcagattgagatgttgtggtgcagaatcttgtga |
14528469 |
T |
 |
| Q |
315 |
gtgaaattgggaa---------ttggtgcaaaagagggttgttgaattttgaggttgttg |
365 |
Q |
| |
|
|||||| |||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
14528468 |
gtgaaaatgggaatgagaagtgttggttgaaaagagggttgttgaattttgaggttgttg |
14528409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 15 - 365
Target Start/End: Complemental strand, 14542994 - 14542635
Alignment:
| Q |
15 |
aagaagcaccattggatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtat |
114 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |
|
|
| T |
14542994 |
aagaagcagcattggatagaaaaaattgaaactttggcaaaaaccttttgtggggttgtgatgaaagtaaccatggtgctcttctgatcatgatgcgtat |
14542895 |
T |
 |
| Q |
115 |
gtcagagtgtgaaaaaccatggttttgaaagaagttgatgactgagtcaggcttatctggggtattgaaacgaacttgcctgaggttgaaagctttgaga |
214 |
Q |
| |
|
|| ||||||||| ||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
14542894 |
gttgtcgtgtgaaaagccatgattttgaaagaaggtgatgactgaatcaggtttatctgcggtattgaaacgaacttgcttgaggttgaaagctttgaga |
14542795 |
T |
 |
| Q |
215 |
gctgattcagttgagaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgtgtttgattctgaagtggctgttatggtgcagaaacttctgg |
314 |
Q |
| |
|
|| |||||| |||||| ||||||||||||| || || ||| |||||||||| |||||| |||||| || | |||| |||||||||| ||| || |
|
|
| T |
14542794 |
gcagattcatgtgagaacccaaaattgttgatgagataagatgcagcgaatggatgtgtgactgattcagattgagatgttgtggtgcagaatcttgtga |
14542695 |
T |
 |
| Q |
315 |
gtgaaattgggaa---------ttggtgcaaaagagggttgttgaattttgaggttgttg |
365 |
Q |
| |
|
|||||||| |||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
14542694 |
gtgaaatttggaatgagaagtgttggttgaaaagagggttgttgaattttgaggttgttg |
14542635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 15 - 282
Target Start/End: Complemental strand, 14520158 - 14519891
Alignment:
| Q |
15 |
aagaagcaccattggatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtat |
114 |
Q |
| |
|
|||||||||| ||||| || |||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
14520158 |
aagaagcacctttggagagtaaaaattgaaactttggcaataccattttgtggggttgtgatgaaagtaaccatggtgcttttgtgatgatgatgcgtat |
14520059 |
T |
 |
| Q |
115 |
gtcagagtgtgaaaaaccatggttttgaaagaagttgatgactgagtcaggcttatctggggtattgaaacgaacttgcctgaggttgaaagctttgaga |
214 |
Q |
| |
|
|| | ||||||||| |||||||||||||||||| |||| || || ||||| ||||||||||||||||||||||| || ||| |||||||||||||||| |
|
|
| T |
14520058 |
gttatcgtgtgaaaagccatggttttgaaagaaggtgataacagaatcaggattatctggggtattgaaacgaacctgtctgttgttgaaagctttgaga |
14519959 |
T |
 |
| Q |
215 |
gctgattcagttgagaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgtgtttgattc |
282 |
Q |
| |
|
|| |||||| |||||||||||| |||||||| |||||||||||||| ||||| ||||||| |||||| |
|
|
| T |
14519958 |
gccgattcatgtgagaaaccaaatttgttgacgaggtatgatacagcaaatggttgtgtgtctgattc |
14519891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 15 - 285
Target Start/End: Complemental strand, 14512318 - 14512048
Alignment:
| Q |
15 |
aagaagcaccattggatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtat |
114 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |
|
|
| T |
14512318 |
aagaagcagcattggatagaaaaaattgaaactttggcaaaaaccttttgtggggttgtgatgaaagtaaccatggtgctcttctgatcatgatgcgtat |
14512219 |
T |
 |
| Q |
115 |
gtcagagtgtgaaaaaccatggttttgaaagaagttgatgactgagtcaggcttatctggggtattgaaacgaacttgcctgaggttgaaagctttgaga |
214 |
Q |
| |
|
|| ||||||||| ||||| |||||||||||| |||||||||| ||||| ||||||| ||||||||||||||| ||| || |||||||| ||||||| |
|
|
| T |
14512218 |
gttgtcgtgtgaaaagccatgattttgaaagaaggtgatgactgaatcaggtttatctgcggtattgaaacgaacatgcttgtagttgaaagatttgaga |
14512119 |
T |
 |
| Q |
215 |
gctgattcagttgagaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgtgtttgattctga |
285 |
Q |
| |
|
||||||||| || ||||||||||||||||| || || ||| |||||||||| |||||| ||||||||| |
|
|
| T |
14512118 |
gctgattcatgtgtgaaaccaaaattgttgatgagataagatgcagcgaatggatgtgtgactgattctga |
14512048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 15 - 328
Target Start/End: Complemental strand, 15007840 - 15007527
Alignment:
| Q |
15 |
aagaagcaccattggatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtat |
114 |
Q |
| |
|
|||||||||| |||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
15007840 |
aagaagcacctttggatagaaaatattcaaactttggcaataacattttgtggggttgtgatgaaagtaaccatggttcttttctaatgatgatgcgtat |
15007741 |
T |
 |
| Q |
115 |
gtcagagtgtgaaaaaccatggttttgaaagaagttgatgactgagtcaggcttatctggggtattgaaacgaacttgcctgaggttgaaagctttgaga |
214 |
Q |
| |
|
|| ||||||||| ||||| |||||||||||| ||| ||||| | |||||| || |||||||||||||||| || || |||||||||||| ||| |
|
|
| T |
15007740 |
gttttcgtgtgaaaagccatgattttgaaagaaggtgagaactgaattaggcttttcaagggtattgaaacgaacctgtttgttgttgaaagctttaaga |
15007641 |
T |
 |
| Q |
215 |
gctgattcagttgagaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgtgtttgattctgaagtggctgttatggtgcagaaacttctgg |
314 |
Q |
| |
|
|| |||| || ||||||||||||||||| || ||||| ||| ||||||||||||| ||||| |||||||| || | |||| |||||| ||| ||| || |
|
|
| T |
15007640 |
gcagattgaggtgagaaaccaaaattgtcgatgaggtaggatgcagcgaatgggtgagtgttggattctgatgttgatgttgtggtgctgaatcttgtga |
15007541 |
T |
 |
| Q |
315 |
gtgaaattgggaat |
328 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
15007540 |
gtgaaattgggaat |
15007527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 19 - 273
Target Start/End: Complemental strand, 14547137 - 14546883
Alignment:
| Q |
19 |
agcaccattggatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtatgtca |
118 |
Q |
| |
|
|||||| |||||||||||||||| |||||| ||||| | | |||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||| |
|
|
| T |
14547137 |
agcacctttggatagaaaaaattcaaacttgggcaaaattatattgtggggttgtaatgaaagtaaccatggtgcttttctaatgatgattcgtatatca |
14547038 |
T |
 |
| Q |
119 |
gagtgtgaaaaaccatggttttgaaagaagttgatgactgagtcaggcttatctggggtattgaaacgaacttgcctgaggttgaaagctttgagagctg |
218 |
Q |
| |
|
|||||||||||| || | |||| ||||| ||||| ||||| | ||| || |||| || |||||| |||| || || ||||||||| |||||||| | |
|
|
| T |
14547037 |
gagtgtgaaaaatcacgatttttgaagaaattgataactgaattaggattttctgcggatttgaaaagaacctgattgttgttgaaagccttgagagcag |
14546938 |
T |
 |
| Q |
219 |
attcagttgagaaaccaaaattgttgacaaggtatgatacagcgaatgggtgtgt |
273 |
Q |
| |
|
|| || ||||||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14546937 |
atagaggtgagaaaccgaaattgttgataaggtatgatacagcgaatgggtgtgt |
14546883 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 14519841 - 14519803
Alignment:
| Q |
335 |
aaaagagggttgttgaattttgaggttgttgatattgtt |
373 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
14519841 |
aaaagagggttgttgaattttggggttgttgattttgtt |
14519803 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 15004496 - 15004541
Alignment:
| Q |
327 |
attggtgcaaaagagggttgttgaattttgaggttgttgatattgt |
372 |
Q |
| |
|
|||| |||| |||||||||||||||||||| |||||||||| |||| |
|
|
| T |
15004496 |
attgatgcagaagagggttgttgaattttggggttgttgattttgt |
15004541 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 14162259 - 14162307
Alignment:
| Q |
16 |
agaagcaccattggatagaaaaaattgaaacttaggcaataaccttttg |
64 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| ||||| | ||||||| |
|
|
| T |
14162259 |
agaagcacctttggagagaaaaaattgaaactttggcaacacccttttg |
14162307 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 14502215 - 14502167
Alignment:
| Q |
16 |
agaagcaccattggatagaaaaaattgaaacttaggcaataaccttttg |
64 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| ||||| | ||||||| |
|
|
| T |
14502215 |
agaagcacctttggagagaaaaaattgaaacttcggcaacacccttttg |
14502167 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 17357066 - 17357206
Alignment:
| Q |
19 |
agcaccattggatagaaaaaattgaaacttaggcaataaccttttgtggggttgtgatgaaagtaaccatggtgctttttcgatgatgatgcgtatgtca |
118 |
Q |
| |
|
|||||| |||||||||||||||| |||||| ||||| | | ||||||| |||| |||||| ||||||||||||||| ||||||| || ||||| |
|
|
| T |
17357066 |
agcacctttggatagaaaaaattcaaactttggcaaaattatattgtgggattgtaatgaaacaaaccatggtgcttttctattgatgattcgaatgtcg |
17357165 |
T |
 |
| Q |
119 |
gagtgtgaaaaaccatggttttgaaagaagttgatgactga |
159 |
Q |
| |
|
||||||| |||| || | |||| ||||| ||||| ||||| |
|
|
| T |
17357166 |
gagtgtgcaaaatcacgatttttgaagaaattgataactga |
17357206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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