View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13620_high_4 (Length: 424)
Name: NF13620_high_4
Description: NF13620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13620_high_4 |
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Alignment Details
Target: chr6 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 8 - 374
Target Start/End: Original strand, 29006017 - 29006383
Alignment:
| Q |
8 |
agcagaaccataggcacctccaaatacccatactatacatctcatatcaaactaagaatgagaagttgtcacataaagcaaacaaatgtaactctgattc |
107 |
Q |
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| T |
29006017 |
agcataaccataggcacctccaaatacccatactatacatctcatatcaaactaagaatgagaagttgtcacataaagcaaacaaatgtaactctgattc |
29006116 |
T |
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| Q |
108 |
ctagtggccccgacataaaaaataaataatgaatccaaagacaagggtcagggggtcaagaagcaagttggagctttaattgacaccagttgtctacata |
207 |
Q |
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| T |
29006117 |
ctagtggccccgacataaaaaataaataatgaatccaaagacaagggtcagggggtcaagaagcaagttggagctttaattgacaccagttgtctacata |
29006216 |
T |
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| Q |
208 |
cctgttgtttatggtgataataatgtctaaatattcattaagaagaatgtgctaggtagatgacctaagaataagactcaatcatgtttgccattataaa |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29006217 |
cctgttgtttatggtgataataatgtctaaatattcattaagaagaatgtgctaggtagatgacctaagaataagactcaatcatgtttgccattataaa |
29006316 |
T |
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| Q |
308 |
tgacatgtctcttttcttattaaacactaatggaaacaactcacaaaatgcttggacacgttgttat |
374 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29006317 |
tgacatgtctcttttcttattaaacactaatggaaacaactcacaaaatgcttggacacgttgttat |
29006383 |
T |
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