View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13621_low_14 (Length: 237)
Name: NF13621_low_14
Description: NF13621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13621_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 223
Target Start/End: Original strand, 21056387 - 21056590
Alignment:
| Q |
20 |
tttttgggttttgaaggaggacgtggcaatgaaagatggggtacctgaaattatgaagaattcaattgtgttacaaacttttggtgttacttatgatcat |
119 |
Q |
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| T |
21056387 |
tttttgggttttgaaggaggacgtggcaatgaaagatggggtacctgaaattatgaagaattcaattgtgttacaaacttttggtgttacttatgatcat |
21056486 |
T |
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| Q |
120 |
ccttgtcagaaagttgaacatgttgtgataccaccgtttgtttcgccggaaagtgtacggaatacgttggagaattttccgatgaacggacggcgagata |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
21056487 |
ccttgtcagaaagttgaacatgttgtgataccaccgtttgtttcgccggaaagtgtacggaatacgttggagaattttccggtgaacggacggcgagata |
21056586 |
T |
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| Q |
220 |
tttg |
223 |
Q |
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|||| |
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| T |
21056587 |
tttg |
21056590 |
T |
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