View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13622_high_8 (Length: 476)
Name: NF13622_high_8
Description: NF13622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13622_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 61 - 456
Target Start/End: Original strand, 36166631 - 36167025
Alignment:
| Q |
61 |
tctcacaactttgcaatttcctccataagcaacactagcctatcctccaacttcccatattccaccttattccactctttaatcactcctttgaatctct |
160 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36166631 |
tctcacaactttgcaatttcctccataagcaacactagcatatcctccaacttctcatattccaccttattccactctttaatcactcctttgaatctct |
36166730 |
T |
|
| Q |
161 |
ttaatttttctttcaacacaaaactcatctacccaatcacttgaaactcttcccaagcctcctcctccaccccttttgaaatttctattattcaactaat |
260 |
Q |
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||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
36166731 |
ttaatttttctttcaacacaaaactcatccacccgatcacttgaaactcttcccaagcctcctcctccaccc-ttttgaaatttctattattcaactaat |
36166829 |
T |
|
| Q |
261 |
gattattaaatctaaatggcttcggtccccaatcaccatctccttccttcaacgcctaagagcaatggtccaagacatccctaggaagaacctaaagcga |
360 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
36166830 |
gattattaaatctaaatggcttcggtccccaatcaccatctccttccttcaacacctaagagcaatggcccaagacatccctaggaagaacctaaagcga |
36166929 |
T |
|
| Q |
361 |
gtaatcccctcccataatggaccaacattctaaaaaacctcatcacttctattcctccaaaactcccaacaaatagctataaagatagaacctaat |
456 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36166930 |
gtaatcccctcccataatggaccaacattctaaaaaacctcatcacttctattcctccaaaactcccaacaaatagctataaagatagaacctaat |
36167025 |
T |
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