View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13625_high_2 (Length: 422)
Name: NF13625_high_2
Description: NF13625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13625_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 139 - 405
Target Start/End: Original strand, 27521885 - 27522140
Alignment:
| Q |
139 |
taaaagtcgatgcttaatcagctcgaatgtcattacattaccggacttgcctttaagctatataaataattaatacatagaaaagcttaattccacttag |
238 |
Q |
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| T |
27521885 |
taaaagtcaatgcttgatcagctcgaatgtcattacattacaggacttgcctttaagctatataaataattaatacatagaaaagcttaattccacttag |
27521984 |
T |
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| Q |
239 |
gaccttataattaagttataattaagcttacagtacactaatagcgtcttcaaaatagggaaactacaaaacatagagctaaatatatatattgataata |
338 |
Q |
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| T |
27521985 |
gaccttat-----------aattaagcttacagtacactattagcgtcttcaaaatagggaaactacaaaacatagagccaaatatatatattgataata |
27522073 |
T |
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| Q |
339 |
ccatccacctttaataaggttttcatcaaaagcatccaagatggcaggtatacaatggttccagggt |
405 |
Q |
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| T |
27522074 |
ccatccacctttaataaggttttcatcaaaagcatccaagatggcaggtatacaatggttccagggt |
27522140 |
T |
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