View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13628_low_11 (Length: 291)

Name: NF13628_low_11
Description: NF13628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13628_low_11
NF13628_low_11
[»] chr5 (42 HSPs)
chr5 (83-272)||(41645375-41645564)
chr5 (5-63)||(21195408-21195467)
chr5 (1-54)||(6519001-6519055)
chr5 (1-54)||(26660780-26660834)
chr5 (1-54)||(26932373-26932427)
chr5 (1-54)||(13761582-13761636)
chr5 (5-57)||(27797810-27797863)
chr5 (5-52)||(3025007-3025055)
chr5 (5-52)||(7317057-7317105)
chr5 (5-52)||(10345008-10345056)
chr5 (5-56)||(27600428-27600480)
chr5 (85-156)||(1309299-1309370)
chr5 (1-63)||(4630890-4630953)
chr5 (1-63)||(15167076-15167138)
chr5 (5-59)||(36164916-36164971)
chr5 (5-63)||(38369901-38369960)
chr5 (5-54)||(2729860-2729910)
chr5 (1-62)||(7579935-7579997)
chr5 (1-54)||(8336483-8336537)
chr5 (5-50)||(21319388-21319434)
chr5 (1-54)||(34446101-34446155)
chr5 (1-62)||(35765966-35766028)
chr5 (5-50)||(39566212-39566258)
chr5 (5-54)||(42104137-42104187)
chr5 (5-52)||(3306085-3306133)
chr5 (5-52)||(32158589-32158637)
chr5 (85-168)||(34534500-34534584)
chr5 (1-37)||(36073722-36073758)
chr5 (6-63)||(14161965-14162024)
chr5 (6-56)||(34208966-34209017)
chr5 (1-63)||(38362202-38362265)
chr5 (12-54)||(39335278-39335321)
chr5 (28-66)||(41645292-41645331)
chr5 (5-39)||(14620584-14620618)
chr5 (215-269)||(41652702-41652756)
chr5 (1-54)||(42662014-42662067)
chr5 (1-52)||(43584452-43584505)
chr5 (1-37)||(7721121-7721156)
chr5 (12-63)||(11977624-11977676)
chr5 (85-157)||(13974415-13974487)
chr5 (85-157)||(27557760-27557832)
chr5 (5-63)||(34534387-34534447)
[»] chr7 (47 HSPs)
chr7 (1-63)||(28289240-28289302)
chr7 (5-63)||(10476165-10476224)
chr7 (1-59)||(19105068-19105127)
chr7 (8-63)||(1031187-1031243)
chr7 (5-64)||(24133192-24133252)
chr7 (5-63)||(8604004-8604063)
chr7 (6-56)||(35777849-35777900)
chr7 (1-63)||(40753491-40753554)
chr7 (1-50)||(27947577-27947627)
chr7 (5-54)||(31418585-31418635)
chr7 (1-54)||(42880006-42880060)
chr7 (5-54)||(45948702-45948752)
chr7 (1-57)||(37490809-37490866)
chr7 (5-52)||(25440901-25440949)
chr7 (1-52)||(31929934-31929986)
chr7 (1-63)||(30312483-30312546)
chr7 (13-63)||(34012198-34012249)
chr7 (1-63)||(48843577-48843640)
chr7 (5-54)||(1742020-1742070)
chr7 (5-54)||(13405199-13405249)
chr7 (1-50)||(29531011-29531061)
chr7 (2-63)||(33682555-33682617)
chr7 (5-54)||(44453164-44453214)
chr7 (5-54)||(48684752-48684802)
chr7 (1-38)||(10599238-10599275)
chr7 (5-52)||(715937-715985)
chr7 (11-58)||(6563482-6563530)
chr7 (4-63)||(8293131-8293191)
chr7 (5-52)||(12977760-12977808)
chr7 (5-41)||(24680157-24680193)
chr7 (1-37)||(27935792-27935828)
chr7 (5-64)||(34274823-34274883)
chr7 (5-52)||(37502348-37502396)
chr7 (1-63)||(40339484-40339547)
chr7 (85-157)||(47187793-47187865)
chr7 (85-156)||(4268794-4268865)
chr7 (5-62)||(21752175-21752233)
chr7 (5-54)||(22298025-22298075)
chr7 (5-54)||(23935451-23935500)
chr7 (5-62)||(33939798-33939856)
chr7 (1-50)||(36807960-36808010)
chr7 (5-54)||(41137757-41137807)
chr7 (5-54)||(42285937-42285987)
chr7 (5-62)||(42753737-42753794)
chr7 (85-157)||(4268873-4268945)
chr7 (85-157)||(28289356-28289428)
chr7 (1-37)||(44567131-44567167)
[»] chr2 (49 HSPs)
chr2 (1-62)||(18719498-18719560)
chr2 (1-63)||(4658298-4658361)
chr2 (1-63)||(18579192-18579255)
chr2 (5-63)||(27964435-27964494)
chr2 (1-54)||(441305-441359)
chr2 (5-63)||(7028877-7028936)
chr2 (1-51)||(16463109-16463160)
chr2 (5-63)||(45301794-45301853)
chr2 (5-54)||(12342122-12342172)
chr2 (1-54)||(38926631-38926685)
chr2 (5-50)||(25383563-25383608)
chr2 (1-41)||(10195599-10195639)
chr2 (5-52)||(22620410-22620458)
chr2 (5-52)||(43427363-43427411)
chr2 (1-59)||(4469526-4469585)
chr2 (5-63)||(7042251-7042310)
chr2 (1-63)||(19164382-19164445)
chr2 (1-59)||(29411721-29411780)
chr2 (1-54)||(32228085-32228139)
chr2 (5-50)||(36178005-36178051)
chr2 (10-63)||(36685805-36685859)
chr2 (5-50)||(42004920-42004966)
chr2 (6-50)||(12393999-12394044)
chr2 (5-61)||(12566047-12566104)
chr2 (5-53)||(15083227-15083276)
chr2 (5-41)||(4133053-4133089)
chr2 (5-52)||(7874720-7874768)
chr2 (8-63)||(8540070-8540126)
chr2 (85-157)||(8540180-8540252)
chr2 (6-49)||(13562024-13562068)
chr2 (110-168)||(7872706-7872765)
chr2 (1-63)||(9391623-9391686)
chr2 (1-63)||(11188557-11188620)
chr2 (5-51)||(14285967-14286014)
chr2 (5-51)||(16807594-16807641)
chr2 (5-51)||(16846875-16846922)
chr2 (5-63)||(35799232-35799290)
chr2 (5-63)||(5717542-5717600)
chr2 (5-50)||(29396758-29396804)
chr2 (14-63)||(37038834-37038884)
chr2 (5-50)||(45081978-45082024)
chr2 (12-52)||(17695901-17695942)
chr2 (5-63)||(4051768-4051828)
chr2 (11-50)||(7644681-7644721)
chr2 (5-37)||(16792512-16792544)
chr2 (1-41)||(29808837-29808877)
chr2 (85-157)||(33056032-33056104)
chr2 (85-157)||(37038709-37038781)
chr2 (5-41)||(43971533-43971569)
[»] chr1 (53 HSPs)
chr1 (8-63)||(46554830-46554886)
chr1 (5-63)||(29567925-29567984)
chr1 (5-63)||(27209018-27209077)
chr1 (5-60)||(16757260-16757316)
chr1 (1-52)||(25487113-25487165)
chr1 (1-52)||(26352155-26352207)
chr1 (1-56)||(46286888-46286944)
chr1 (5-63)||(34047298-34047357)
chr1 (5-54)||(15823063-15823113)
chr1 (5-62)||(26595133-26595191)
chr1 (1-54)||(43358272-43358326)
chr1 (10-63)||(49900820-49900874)
chr1 (5-54)||(50094258-50094308)
chr1 (5-53)||(24884444-24884493)
chr1 (5-52)||(12591156-12591204)
chr1 (1-41)||(13408351-13408391)
chr1 (5-56)||(49468781-49468833)
chr1 (5-52)||(50249339-50249387)
chr1 (1-52)||(52024308-52024360)
chr1 (1-63)||(7191270-7191333)
chr1 (5-63)||(25560935-25560994)
chr1 (85-183)||(26594980-26595079)
chr1 (5-63)||(39477771-39477829)
chr1 (5-54)||(9915472-9915522)
chr1 (1-54)||(10842805-10842859)
chr1 (6-63)||(18794605-18794663)
chr1 (5-54)||(32807010-32807060)
chr1 (5-54)||(35848005-35848055)
chr1 (1-54)||(40717368-40717422)
chr1 (5-54)||(44108628-44108678)
chr1 (1-54)||(46045998-46046052)
chr1 (1-54)||(48009035-48009089)
chr1 (5-54)||(48025326-48025376)
chr1 (1-54)||(49426487-49426541)
chr1 (5-53)||(1740714-1740763)
chr1 (6-54)||(24611592-24611641)
chr1 (5-174)||(44556989-44557166)
chr1 (115-186)||(27209536-27209608)
chr1 (1-52)||(27720983-27721035)
chr1 (5-50)||(14373489-14373535)
chr1 (1-54)||(31491842-31491896)
chr1 (2-55)||(31699360-31699414)
chr1 (1-50)||(43759357-43759407)
chr1 (5-50)||(49402947-49402993)
chr1 (2-59)||(51244904-51244962)
chr1 (5-50)||(52125212-52125258)
chr1 (5-42)||(14593405-14593442)
chr1 (1-38)||(33622454-33622491)
chr1 (5-42)||(44258592-44258629)
chr1 (5-41)||(25151844-25151880)
chr1 (5-52)||(34032154-34032202)
chr1 (5-41)||(34110556-34110592)
chr1 (1-56)||(52066359-52066414)
[»] chr8 (38 HSPs)
chr8 (5-63)||(39463288-39463347)
chr8 (1-59)||(6374439-6374497)
chr8 (6-52)||(396290-396336)
chr8 (1-63)||(6116070-6116133)
chr8 (6-63)||(5295471-5295529)
chr8 (6-63)||(9812203-9812261)
chr8 (5-54)||(39698740-39698790)
chr8 (1-54)||(43084701-43084755)
chr8 (5-53)||(43448745-43448794)
chr8 (5-52)||(15160522-15160570)
chr8 (1-52)||(17655932-17655984)
chr8 (5-56)||(19438265-19438317)
chr8 (5-56)||(19574416-19574468)
chr8 (1-52)||(40362460-40362512)
chr8 (5-63)||(29312258-29312317)
chr8 (5-50)||(4989507-4989553)
chr8 (5-54)||(29025820-29025870)
chr8 (1-39)||(31693711-31693749)
chr8 (84-157)||(15227710-15227783)
chr8 (85-130)||(34156676-34156721)
chr8 (1-38)||(40228599-40228636)
chr8 (1-63)||(514899-514965)
chr8 (5-63)||(34156563-34156623)
chr8 (1-52)||(36921382-36921434)
chr8 (5-52)||(37559609-37559657)
chr8 (9-63)||(13368013-13368068)
chr8 (5-63)||(13496264-13496323)
chr8 (2-60)||(15227593-15227652)
chr8 (1-63)||(45358959-45359022)
chr8 (5-54)||(4760632-4760682)
chr8 (1-50)||(17920981-17921031)
chr8 (110-156)||(33746080-33746126)
chr8 (5-50)||(35356336-35356382)
chr8 (5-50)||(44713563-44713609)
chr8 (5-49)||(9304712-9304757)
chr8 (1-34)||(43594854-43594887)
chr8 (85-157)||(6115944-6116016)
chr8 (1-52)||(39765936-39765987)
[»] chr4 (44 HSPs)
chr4 (5-63)||(47817767-47817826)
chr4 (5-59)||(10573227-10573282)
chr4 (1-63)||(22220428-22220491)
chr4 (6-63)||(34413616-34413674)
chr4 (5-52)||(4505366-4505413)
chr4 (1-63)||(38510314-38510377)
chr4 (1-63)||(41496230-41496293)
chr4 (5-59)||(50203103-50203158)
chr4 (5-54)||(24940908-24940958)
chr4 (5-54)||(29519603-29519653)
chr4 (1-54)||(45043666-45043720)
chr4 (5-54)||(53814575-53814625)
chr4 (5-57)||(19451286-19451339)
chr4 (6-50)||(49080559-49080604)
chr4 (1-60)||(25123798-25123858)
chr4 (1-63)||(27943614-27943678)
chr4 (5-56)||(34316251-34316303)
chr4 (1-63)||(8971067-8971130)
chr4 (1-63)||(11364251-11364314)
chr4 (5-59)||(30261288-30261343)
chr4 (5-54)||(1819591-1819641)
chr4 (5-54)||(2493131-2493181)
chr4 (5-54)||(19878677-19878727)
chr4 (1-54)||(20448064-20448118)
chr4 (5-54)||(37654438-37654488)
chr4 (5-54)||(40345425-40345475)
chr4 (10-59)||(45839671-45839721)
chr4 (1-50)||(50623108-50623158)
chr4 (5-50)||(52957872-52957918)
chr4 (8-52)||(7906076-7906121)
chr4 (10-54)||(18430023-18430068)
chr4 (7-50)||(19930745-19930789)
chr4 (5-52)||(21864463-21864511)
chr4 (5-52)||(21920324-21920372)
chr4 (5-52)||(37624585-37624633)
chr4 (5-41)||(39982132-39982168)
chr4 (5-63)||(25231204-25231263)
chr4 (5-50)||(44571947-44571993)
chr4 (5-50)||(52848136-52848182)
chr4 (89-177)||(19451127-19451216)
chr4 (1-38)||(30780227-30780264)
chr4 (5-54)||(40837159-40837209)
chr4 (85-157)||(41496346-41496418)
chr4 (5-37)||(52915638-52915670)
[»] chr3 (42 HSPs)
chr3 (5-62)||(48901749-48901807)
chr3 (5-62)||(48903315-48903373)
chr3 (1-63)||(19373611-19373674)
chr3 (5-63)||(30934871-30934930)
chr3 (5-63)||(40487857-40487916)
chr3 (1-54)||(3152877-3152931)
chr3 (1-54)||(47137988-47138042)
chr3 (5-54)||(38016404-38016453)
chr3 (5-60)||(27067637-27067693)
chr3 (1-52)||(50038244-50038296)
chr3 (6-56)||(45213791-45213842)
chr3 (1-54)||(51398035-51398089)
chr3 (11-63)||(4392231-4392284)
chr3 (1-50)||(53200756-53200805)
chr3 (5-52)||(42571602-42571650)
chr3 (5-51)||(11393574-11393621)
chr3 (1-63)||(22857115-22857178)
chr3 (5-63)||(30315338-30315397)
chr3 (1-63)||(36844804-36844867)
chr3 (5-59)||(42072014-42072069)
chr3 (5-59)||(50646176-50646231)
chr3 (5-54)||(30426395-30426445)
chr3 (1-50)||(36460831-36460881)
chr3 (5-50)||(36729885-36729931)
chr3 (1-54)||(39356910-39356964)
chr3 (5-50)||(41850419-41850465)
chr3 (5-54)||(47895415-47895465)
chr3 (5-54)||(50088387-50088437)
chr3 (5-52)||(4759020-4759068)
chr3 (1-56)||(11019895-11019951)
chr3 (1-56)||(30431145-30431201)
chr3 (1-52)||(32492254-32492306)
chr3 (5-52)||(44676250-44676298)
chr3 (1-56)||(45566824-45566880)
chr3 (5-52)||(19115416-19115463)
chr3 (5-63)||(38140979-38141038)
chr3 (5-50)||(33194106-33194152)
chr3 (1-62)||(47823514-47823576)
chr3 (2-50)||(45460689-45460738)
chr3 (5-56)||(2458036-2458088)
chr3 (6-53)||(7230968-7231016)
chr3 (84-124)||(38141090-38141130)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-63)||(4166-4229)
[»] chr6 (23 HSPs)
chr6 (6-63)||(32193732-32193790)
chr6 (1-63)||(9940673-9940736)
chr6 (5-54)||(234063-234113)
chr6 (5-54)||(29713480-29713530)
chr6 (1-63)||(577086-577149)
chr6 (10-56)||(1134959-1135006)
chr6 (5-62)||(3988809-3988867)
chr6 (5-54)||(19675009-19675059)
chr6 (5-52)||(4850571-4850619)
chr6 (5-57)||(13503917-13503972)
chr6 (3-62)||(17267673-17267733)
chr6 (5-52)||(29399975-29400023)
chr6 (85-187)||(13011256-13011359)
chr6 (5-63)||(18737155-18737214)
chr6 (1-50)||(10520717-10520767)
chr6 (5-54)||(12063584-12063634)
chr6 (10-59)||(12459387-12459437)
chr6 (1-54)||(24556002-24556056)
chr6 (85-177)||(12459237-12459330)
chr6 (5-49)||(34513682-34513727)
chr6 (5-63)||(12322951-12323008)
chr6 (5-52)||(19689359-19689407)
chr6 (5-37)||(32429313-32429345)
[»] scaffold0332 (1 HSPs)
scaffold0332 (1-52)||(3886-3938)
[»] scaffold0502 (1 HSPs)
scaffold0502 (5-63)||(636-695)
[»] scaffold0565 (1 HSPs)
scaffold0565 (5-54)||(9715-9765)
[»] scaffold0182 (1 HSPs)
scaffold0182 (5-62)||(18320-18378)
[»] scaffold0110 (1 HSPs)
scaffold0110 (5-54)||(24814-24864)
[»] scaffold0294 (1 HSPs)
scaffold0294 (5-54)||(3578-3628)
[»] scaffold0015 (1 HSPs)
scaffold0015 (6-54)||(21155-21204)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-41)||(9470-9510)
[»] scaffold0300 (1 HSPs)
scaffold0300 (1-63)||(4590-4653)
[»] scaffold2107 (1 HSPs)
scaffold2107 (5-52)||(589-637)
[»] scaffold0983 (1 HSPs)
scaffold0983 (11-62)||(752-804)


Alignment Details
Target: chr5 (Bit Score: 162; Significance: 2e-86; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 83 - 272
Target Start/End: Original strand, 41645375 - 41645564
Alignment:
Q  83 aaataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaacaacttcatttttaaatggagtgagt 182  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||    
T  41645375 aaataatttgataaaatatcaactctattacttttaattaatgaatttcctaatatgcgtgtaaaatccttaaaaaacttcatttttaaatggagtgagt 41645474  T
Q  183 aatatgcatgtccaatcattaatagagtaacttgtggacccaaaaataagggcaacttgttagataatctgccggtataaatttggaaca 272  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41645475 aatatgcatttccaatcattaatagagtaacgtgtggacccaaaaataagggcaacttgttagacaatctgccggtataaatttggaaca 41645564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 21195408 - 21195467
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  21195408 caatgcaataataattttttcttttcaattgtacccttcaattaatactatatacactac 21195467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6519001 - 6519055
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  6519001 ttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactat 6519055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26660780 - 26660834
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  26660780 ttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactat 26660834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26932373 - 26932427
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  26932373 ttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactat 26932427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13761582 - 13761636
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  13761582 ttttcaatgcaataataaatttttcttttcaattgtacccttcaattaatactat 13761636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 27797810 - 27797863
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatata 57  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  27797810 caatgcaataataactttttcttttcaattgtacccttcagttaatactatata 27797863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 3025055 - 3025007
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  3025055 caatgcaataataactttttcttttcaattgtaccctccaattaatact 3025007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 7317057 - 7317105
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  7317057 caatgcaataataactttttcttttcaattgtaccctccaattaatact 7317105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 10345056 - 10345008
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  10345056 caatgcaataataactttttcttttcaattgtaccctccaattaatact 10345008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 27600428 - 27600480
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||||    
T  27600428 caatgcaataataactttttcttttcaattatacccttcaattaatactatat 27600480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 1309370 - 1309299
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaa 156  Q
    |||||||||||||||| ||  |||||||||||||||||||| ||||  | ||||| |||||||| |||||||    
T  1309370 ataatttgataaaataacatatctatttcttttaattaatgcatttcttaatatgtgtgtaaaaaccttaaa 1309299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4630890 - 4630953
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||| ||||||||||||||| |||||||||||| ||| ||||||||||| || |||||||    
T  4630890 ttttcaatacaataataactttttcttttcaattgtatcctccaattaatactttacacactac 4630953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15167138 - 15167076
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac-cctcaattaatactatatacactac 63  Q
    |||||||||||||||||||||||| ||||||||| ||| | ||||||| |||||||||||||||    
T  15167138 ttttcaatgcaataataacttttt-ttttcaattttactcttcaattattactatatacactac 15167076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 36164916 - 36164971
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatataca 59  Q
    ||||||| |||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  36164916 caatgcagtaataactttttcttttcaattatacccttcaattaatactatataca 36164971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 38369901 - 38369960
Alignment:
Q  5 caatgcaataataactttttattttcaattgtac-cctcaattaatactatatacactac 63  Q
    |||||||||||||||||||| |||| |||||||| | |||||||||| ||||||||||||    
T  38369901 caatgcaataataactttttcttttaaattgtactcttcaattaatattatatacactac 38369960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 2729910 - 2729860
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  2729910 caatgcaataataactttttcttttcaattgtacccttcaattaaaactat 2729860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7579997 - 7579935
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac-cctcaattaatactatatacacta 62  Q
    |||||||| ||||||||||||||| ||||||||||||| | |||||||||| | |||||||||    
T  7579997 ttttcaatacaataataactttttcttttcaattgtactcttcaattaatattgtatacacta 7579935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8336537 - 8336483
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac-cctcaattaatactat 54  Q
    ||||||||||||||||||||| || ||||||||||||| | ||||||||||||||    
T  8336537 ttttcaatgcaataataacttctttttttcaattgtactcttcaattaatactat 8336483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 21319434 - 21319388
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  21319434 caatgcaataataactttttcttttcaattgtacccttcaattaata 21319388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34446155 - 34446101
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||    
T  34446155 ttttcaatacaataataacattttcttttcaattgtacccttcaattaatactat 34446101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35766028 - 35765966
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatactatatacacta 62  Q
    |||||||| ||||||||||||||| |||||||||||||| | ||||||||||| || ||||||    
T  35766028 ttttcaatacaataataactttttcttttcaattgtaccgtccaattaatactctacacacta 35765966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 39566212 - 39566258
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  39566212 caatgcaataataactttttcttttcaattgtacccttcaattaata 39566258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 42104187 - 42104137
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  42104187 caatgcaataataactttttcttttcaattttacccttcaattaatactat 42104137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 3306133 - 3306085
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatact 52  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  3306133 caatgcaataataattttttcttttcaattgtacccttcaattaatact 3306085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 32158589 - 32158637
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  32158589 caatacaataataacttttttttttcaattgtaccctccaattaatact 32158637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 34534500 - 34534584
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaacaac-ttcatttt 168  Q
    |||||||| |||||||  | |||| |||||||||||||||| ||||| | ||||| |||||||| ||| ||||||| ||||||||    
T  34534500 ataatttggtaaaataatatctctctttcttttaattaatgcattttttaatatgtgtgtaaaaacctcaaacaacattcatttt 34534584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36073758 - 36073722
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  36073758 ttttcaatgcaataataactttttcttttcaattgta 36073722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 14162024 - 14161965
Alignment:
Q  6 aatgcaataataactttttattttcaatt-gtaccct-caattaatactatatacactac 63  Q
    ||||||||||||| ||||| ||||||||| ||||| | ||||||||||||||||||||||    
T  14162024 aatgcaataataattttttcttttcaatttgtaccattcaattaatactatatacactac 14161965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 34209017 - 34208966
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||| |||||    
T  34209017 aatgcaataataacttttttttttcaattatacccttcaattaatattatat 34208966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38362265 - 38362202
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||||||  ||||||||| ||||| | |||||||||| |||| |||||    
T  38362265 ttttcaatgcaataataacttttccttttcaattatacccataaattaatactttatatactac 38362202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 39335321 - 39335278
Alignment:
Q  12 ataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||    
T  39335321 ataataactttttcttttcaattgtacccttcaattaatactat 39335278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 41645292 - 41645331
Alignment:
Q  28 ttcaattgtaccct-caattaatactatatacactacaaa 66  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  41645292 ttcaattgtacccttcaattaatactatatacactacaaa 41645331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 14620618 - 14620584
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  14620618 caatgcaataataactttttcttttcaattgtacc 14620584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 41652702 - 41652756
Alignment:
Q  215 tgtggacccaaaaataagggcaacttgttagataatctgccggtataaatttgga 269  Q
    ||||||||||||||||| |||||| ||||||| | || |||| ||||||||||||    
T  41652702 tgtggacccaaaaataaaggcaacctgttagacactcagccgttataaatttgga 41652756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42662067 - 42662014
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||    
T  42662067 ttttcaatgtaataataatttttt-ttttcaattgtacccttcaattaatactat 42662014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43584505 - 43584452
Alignment:
Q  1 ttttcaatgcaataataact-ttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||| ||||||||| |||||| |||||||||||    
T  43584505 ttttcaatgcaataataacttttttcttttcaattataccctccaattaatact 43584452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7721121 - 7721156
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgta 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  7721121 ttttcaatgcaataataacttttt-ttttcaattgta 7721156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 11977624 - 11977676
Alignment:
Q  12 ataataactttttattttcaattgta-ccctcaattaatactatatacactac 63  Q
    ||||||||||||| |||||||||||| || | |||||||| ||||||||||||    
T  11977624 ataataactttttcttttcaattgtatcctttaattaatattatatacactac 11977676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 13974415 - 13974487
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaac 157  Q
    |||||||| ||||||| || |||| |||||||||||||||| ||||  | ||||| ||||||||  |||||||    
T  13974415 ataatttggtaaaataacacctctctttcttttaattaatgcatttcttaatatgtgtgtaaaaatcttaaac 13974487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 27557832 - 27557760
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaac 157  Q
    |||||||||||||||| || ||||  ||||||||||||||| ||||  | ||||| || ||||||| ||||||    
T  27557832 ataatttgataaaataacatctcttattcttttaattaatgtatttcttaatatgtgtataaaatctttaaac 27557760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 34534387 - 34534447
Alignment:
Q  5 caatgcaataataacttttta-ttttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||| |||||  ||||||||||||||| ||||||||||||||  |||||||    
T  34534387 caatgcaataataatttttttcttttcaattgtacccttcaattaatactatgcacactac 34534447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28289240 - 28289302
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccctcaattaatactatatacactac 63  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  28289240 ttttcaatgcaataataacattttcttttcaattgtaccttcaattaatactatatacactac 28289302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 10476165 - 10476224
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  10476165 caatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactac 10476224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19105127 - 19105068
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatataca 59  Q
    |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  19105127 tttttaatgcaataataactttttcttttcaattgtacccttcaattaatactatataca 19105068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 1031187 - 1031243
Alignment:
Q  8 tgcaataataactttttattttcaattgtac-cctcaattaatactatatacactac 63  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  1031187 tgcaataataacattttattttcaattgtactcttcaattaatactatatacactac 1031243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 24133252 - 24133192
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactaca 64  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  24133252 caatgcaataataattttttcttttcaattgtacccttcaattaatactatatatactaca 24133192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 8604004 - 8604063
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||    
T  8604004 caatgcaataataactttttcttttcaatgatacccttcaattaatactatatacactac 8604063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 35777849 - 35777900
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  35777849 aatgcaataataactttttattttcaattgtacccttcaattagtactatat 35777900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40753554 - 40753491
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtacc-ctcaattaatactatatacactac 63  Q
    ||||||||| |||||||| ||||| ||||||||||||||  |||||||||||||||||||||||    
T  40753554 ttttcaatgtaataataattttttcttttcaattgtaccattcaattaatactatatacactac 40753491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27947627 - 27947577
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  27947627 ttttcaatgcaataataactttttcttttcaattgtacccttcaattaata 27947577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 31418635 - 31418585
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  31418635 caatgcaataataactttttcttttcaattgtacccttcaattaatactat 31418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42880060 - 42880006
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  42880060 ttttcaatgtaataataactttttcttttcaattgtacccttcaattaatactat 42880006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 45948752 - 45948702
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  45948752 caatgcaataataactttttcttttcaattgtacccttcaattaatactat 45948702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37490809 - 37490866
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtacc-ctcaattaatactatata 57  Q
    |||||||||||||||||| ||||| ||||||||||||||  |||||||||||||||||    
T  37490809 ttttcaatgcaataataattttttcttttcaattgtacctttcaattaatactatata 37490866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 25440901 - 25440949
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  25440901 caatgcaataataactttttcttttcaattgtaccctccaattaatact 25440949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31929986 - 31929934
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  31929986 ttttcaatgcaataataattttttcttttcaattgtaccctccaattaatact 31929934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 30312483 - 30312546
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||| ||||||||| ||||| ||||||||||||||| |||||||||| | ||||||||||    
T  30312483 ttttcaatacaataataattttttcttttcaattgtacccttcaattaatattgtatacactac 30312546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 34012198 - 34012249
Alignment:
Q  13 taataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||| |||||    
T  34012198 taataacttttttttttcaattgtacccttcaattaatactatataaactac 34012249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48843577 - 48843640
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccctcaa-ttaatactatatacactac 63  Q
    |||||||||||||||||| ||||| | ||||||| |||||| || |||||||||||||||||||    
T  48843577 ttttcaatgcaataataattttttctcttcaattatacccttaatttaatactatatacactac 48843640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 1742020 - 1742070
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||||||||    
T  1742020 caatgcaataataaccttttcttttcaattgtacccttcaattaatactat 1742070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 13405249 - 13405199
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  13405249 caatgtaataataactttttcttttcaattgtacccttcaattaatactat 13405199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29531061 - 29531011
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  29531061 ttttcaatgcaataataattttttcttttcaattgtacccttcaattaata 29531011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 33682555 - 33682617
Alignment:
Q  2 tttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||||||||||| ||||  ||||||||| ||||| |||||||||||| ||||||||||    
T  33682555 tttcaatgcaataataatttttccttttcaattttacccttcaattaatactttatacactac 33682617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 44453164 - 44453214
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||||||    
T  44453164 caatgcaataataactttcttttttcaattgtacccttcaattaatactat 44453214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 48684752 - 48684802
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  48684752 caatgcaataataactttttcttttcaattgtacctttcaattaatactat 48684802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10599238 - 10599275
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  10599238 ttttcaatgcaataataactttttcttttcaattgtac 10599275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 715985 - 715937
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  715985 caatgcaataataattttttcttttcaattgtaccctccaattaatact 715937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 6563530 - 6563482
Alignment:
Q  11 aataataactttttattttcaattgtaccc-tcaattaatactatatac 58  Q
    |||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  6563530 aataataactttttcttttcaattgtacccttcaattaatattatatac 6563482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 8293191 - 8293131
Alignment:
Q  4 tcaatgcaataataactttttattttcaattgta-ccctcaattaatactatatacactac 63  Q
    |||| ||||||||||||||||||||||||||||| |  | |||||||| ||||||||||||    
T  8293191 tcaaagcaataataactttttattttcaattgtatcttttaattaatattatatacactac 8293131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 12977808 - 12977760
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||| | |||||||||||    
T  12977808 caatgcaataataactttttcttttcaattgtaccatccaattaatact 12977760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 24680157 - 24680193
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  24680157 caatgcaataataactttttcttttcaattgtaccct 24680193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27935792 - 27935828
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgta 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  27935792 ttttcaatgcaataataactttttatcttcaattgta 27935828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 34274823 - 34274883
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactaca 64  Q
    ||||||||||||||| |||| |||| ||||||||||| ||||||||||| || ||||||||    
T  34274823 caatgcaataataaccttttctttttaattgtaccctccaattaatactctacacactaca 34274883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 37502348 - 37502396
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  37502348 caatgcaataataactttttcttttcaattttaccctccaattaatact 37502396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40339484 - 40339547
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatacta-tatacactac 63  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||||| || ||||||||||    
T  40339484 ttttcaatgcaataataactttat-ttttcaattgtacccttcaattaatattattatacactac 40339547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 47187793 - 47187865
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaac 157  Q
    |||||||| ||||||| ||| ||| ||||||||||| |||| ||||| | |||||| ||||||| ||||||||    
T  47187793 ataatttggtaaaataacaattctctttcttttaatcaatgcattttttaatatgcatgtaaaaaccttaaac 47187865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 4268794 - 4268865
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaa 156  Q
    |||||||| ||||||| || |||| |||||||||||||||| ||||  | ||||| |||||||| |||||||    
T  4268794 ataatttggtaaaataacatctctctttcttttaattaatgcatttcttaatatgtgtgtaaaaaccttaaa 4268865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 21752233 - 21752175
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatactatatacacta 62  Q
    ||||||||||||||||||||  |||||||||||||  |||||||| | |||||||||||    
T  21752233 caatgcaataataactttttcgtttcaattgtaccattcaattaacattatatacacta 21752175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 22298025 - 22298075
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||| ||||||| ||| ||||||||||    
T  22298025 caatgcaataataactttttcttttcaactgtacccttcagttaatactat 22298075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 23935451 - 23935500
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  23935451 caatgcaataataactttttcttttcaa-tgtacccttcaattaatactat 23935500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 33939856 - 33939798
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatactatatacacta 62  Q
    ||||| |||||||||||||| ||| ||||||||||  |||||||||| |||||||||||    
T  33939856 caatgtaataataactttttctttccaattgtaccattcaattaatattatatacacta 33939798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36807960 - 36808010
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac-cctcaattaata 50  Q
    |||||||| ||||||||||||||| ||||||||||||| | ||||||||||    
T  36807960 ttttcaatacaataataactttttcttttcaattgtactcttcaattaata 36808010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 41137757 - 41137807
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||| ||||| ||||||||||||||| |||||| |||||||    
T  41137757 caatgcaataataattttttcttttcaattgtacccttcaattgatactat 41137807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 42285937 - 42285987
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||| ||||| ||||||||| ||||| ||||||||||||||    
T  42285937 caatgcaataataattttttcttttcaattatacccttcaattaatactat 42285987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 42753737 - 42753794
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccctcaattaatactatatacacta 62  Q
    |||| ||||||||||  ||| |||||||| ||||| |||||||||| |||||||||||    
T  42753737 caatacaataataacactttcttttcaatcgtaccttcaattaatattatatacacta 42753794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 4268873 - 4268945
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaac 157  Q
    |||||||| ||||||| || || | |||||||||||||||| ||||  | ||||| |||||||| ||||||||    
T  4268873 ataatttggtaaaataacatctttctttcttttaattaatgcatttcttaatatgtgtgtaaaaaccttaaac 4268945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 28289356 - 28289428
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaac 157  Q
    |||||||| ||||||| || |||| ||| |||||||||||| ||||  | ||||| |||||||| ||||||||    
T  28289356 ataatttggtaaaataacatctctctttattttaattaatgtatttattaatatgtgtgtaaaaaccttaaac 28289428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44567167 - 44567131
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgta 37  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  44567167 ttttcaatgcaataataaatttttcttttcaattgta 44567131  T

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Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18719560 - 18719498
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacacta 62  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  18719560 ttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatatacacta 18719498  T

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Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4658361 - 4658298
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  4658361 ttttcaatgtaataataattttttcttttcaattgtacccttcaattaatactatatacactac 4658298  T

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Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18579192 - 18579255
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||    
T  18579192 ttttcaatgcaataataattttttcttttcaattgcacccttcaattaatactatatacactac 18579255  T

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Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 27964494 - 27964435
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  27964494 caatgcaataataactttttcttttcaattgtacccttcaattaatactatacacactac 27964435  T

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Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 441359 - 441305
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  441359 ttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactat 441305  T

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Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 7028936 - 7028877
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  7028936 caatgcaataatgactttttcttttcaaatgtacccttcaattaatactatatacactac 7028877  T

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Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16463160 - 16463109
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatac 51  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  16463160 ttttcaatgcaataataactttttcttttcaattgtacccttcaattaatac 16463109  T

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Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 45301794 - 45301853
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||| | ||||||||    
T  45301794 caatgcaataataactttttcttttcaattgtacccatcaattaatactgtgtacactac 45301853  T

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Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 12342122 - 12342172
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  12342122 caatgcaataataactttttcttttcaattgtacccttcaattaatactat 12342172  T

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Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38926631 - 38926685
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||||||||||||    
T  38926631 ttttcaatgcaataataacttctttttttcaattgtacccttcaattaatactat 38926685  T

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Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 25383608 - 25383563
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccctcaattaata 50  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||    
T  25383608 caatgcaataataactttttcttttcaattgtaccttcaattaata 25383563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10195599 - 10195639
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct 41  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  10195599 ttttcaatgcaataataacattttattttcaattgtaccct 10195639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 22620458 - 22620410
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  22620458 caatgcaataataactttttcttttcaattgtaccctccaattaatact 22620410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 43427411 - 43427363
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  43427411 caatgcaataataactttttcttttcaattgtaccctccaattaatact 43427363  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4469526 - 4469585
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatataca 59  Q
    |||||||| ||||||||||||||| ||||||||||||||| | |||||||| ||||||||    
T  4469526 ttttcaatacaataataactttttcttttcaattgtacccttaaattaatattatataca 4469585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 7042310 - 7042251
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||||||| ||||||| |||| || |||||||| ||||||||||||||||||||||    
T  7042310 caatgcaataatgactttttctttttaaatgtacccttcaattaatactatatacactac 7042251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19164382 - 19164445
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgta-ccctcaattaatactatatacactac 63  Q
    |||| ||||||||||||||||||| |||| ||||||| || |||||||||| ||||||||||||    
T  19164382 tttttaatgcaataataactttttctttttaattgtatccttcaattaatattatatacactac 19164445  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 29411721 - 29411780
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatataca 59  Q
    ||||||||||||||||||| |||| |||| |||||||||| |||||||||| ||||||||    
T  29411721 ttttcaatgcaataataaccttttctttttaattgtacccttcaattaatattatataca 29411780  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32228139 - 32228085
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||    
T  32228139 ttttaaatgcaataataactttttcttttcagttgtacccttcaattaatactat 32228085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 36178005 - 36178051
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  36178005 caatgcaataataacttttttttttcaattgtacccttcaattaata 36178051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 36685859 - 36685805
Alignment:
Q  10 caataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||||| |||||||    
T  36685859 caataataattttttcttttcaattgtacccttcaattaatactataaacactac 36685805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 42004920 - 42004966
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  42004920 caatgcaataataattttttattttcaattgtacccttcaattaata 42004966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 12394044 - 12393999
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||    
T  12394044 aatgcaataataactttttatttttaattgtacccttcaattaata 12393999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 12566104 - 12566047
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatactatatacact 61  Q
    |||||||||||||| ||||| ||||||||||||||  |||||||||| ||||||||||    
T  12566104 caatgcaataataatttttttttttcaattgtaccattcaattaatattatatacact 12566047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 15083276 - 15083227
Alignment:
Q  5 caatgcaataataactttttattttcaattgtac-cctcaattaatacta 53  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||||||    
T  15083276 caatgcaataataacattttattttcaattgtactcttcaattaatacta 15083227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 4133053 - 4133089
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  4133053 caatgcaataataactttttcttttcaattgtaccct 4133089  T

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Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 7874768 - 7874720
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatact 52  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  7874768 caatgcaataataactttttcttttcaatcgtacccttcaattaatact 7874720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 8540070 - 8540126
Alignment:
Q  8 tgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||||||||||| |||| |||||||||| |||||||||| ||| ||||||||    
T  8540070 tgcaataataactttttctttttaattgtacccttcaattaatattatttacactac 8540126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 8540180 - 8540252
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaac 157  Q
    |||||||||||||||| || |||| |||||||||||||||| ||||  | ||||| ||||||||  |||||||    
T  8540180 ataatttgataaaataacatctctttttcttttaattaatgcatttcttaatatgtgtgtaaaaatcttaaac 8540252  T

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Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 13562024 - 13562068
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccc-tcaattaat 49  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||    
T  13562024 aatgcaataataactttttcttttcaattgtacccttcaattaat 13562068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 7872765 - 7872706
Alignment:
Q  110 tttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaacaac-ttcatttt 168  Q
    |||||||||||||||||||||| | ||||| |||||||| || |||||||| ||||||||    
T  7872765 tttcttttaattaatgaattttttaatatgtgtgtaaaaaccataaacaacattcatttt 7872706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9391686 - 9391623
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgt-accctcaattaatactatatacactac 63  Q
    |||| ||||||||||||| ||||| ||||||||||| ||| | |||||||| ||||||||||||    
T  9391686 tttttaatgcaataataattttttcttttcaattgtgacctttaattaatattatatacactac 9391623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11188620 - 11188557
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgta-ccctcaattaatactatatacactac 63  Q
    |||||||||||| |||||||| || |||||||||||| |  ||||||||| |||||||||||||    
T  11188620 ttttcaatgcaacaataacttatttttttcaattgtatcattcaattaatcctatatacactac 11188557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 14285967 - 14286014
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatac 51  Q
    |||| ||||||||||||||| |||||||||||||||| ||||||||||    
T  14285967 caatacaataataacttttttttttcaattgtaccctccaattaatac 14286014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 16807641 - 16807594
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatac 51  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||    
T  16807641 caatgcaataataattttttcttttcaattgtacccttcaattaatac 16807594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 16846922 - 16846875
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatac 51  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||    
T  16846922 caatgcaataataattttttcttttcaattgtacccttcaattaatac 16846875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 35799232 - 35799290
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| |||  |||||||    
T  35799232 caatgcaataataacttttt-ttttcaattgtaccctccaattaatattatgcacactac 35799290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 5717542 - 5717600
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccctcaattaatactatatacactac 63  Q
    |||||||||||||| ||||| |||| |||||||||  ||||||||||| || |||||||    
T  5717542 caatgcaataataaatttttctttttaattgtacctccaattaatactctacacactac 5717600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 29396804 - 29396758
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  29396804 caatgcaataataactttttcttttcaattatacccttcaattaata 29396758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 37038884 - 37038834
Alignment:
Q  14 aataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||||| ||||||||| ||||| |||||||||| ||||||||||||    
T  37038884 aataactttttcttttcaattatacccttcaattaatattatatacactac 37038834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 45082024 - 45081978
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  45082024 caatgcaataataattttttcttttcaattgtacccttcaattaata 45081978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 17695942 - 17695901
Alignment:
Q  12 ataataactttttattttcaattgtaccct-caattaatact 52  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  17695942 ataataactttttcttttcaattgtaccctccaattaatact 17695901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 4051828 - 4051768
Alignment:
Q  5 caatgcaataataacttttta-ttttcaattgtaccctc-aattaatactatatacactac 63  Q
    |||||||||||||| |||||  |||||||||||||| || |||||||||||| ||||||||    
T  4051828 caatgcaataataatttttttcttttcaattgtaccttccaattaatactatgtacactac 4051768  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 7644681 - 7644721
Alignment:
Q  11 aataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  7644681 aataataactttttcttttcaattgtacccttcaattaata 7644721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 16792512 - 16792544
Alignment:
Q  5 caatgcaataataactttttattttcaattgta 37  Q
    |||||||||||||||||||| ||||||||||||    
T  16792512 caatgcaataataactttttcttttcaattgta 16792544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29808837 - 29808877
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct 41  Q
    ||||||||||||| |||||||||| |||||||| |||||||    
T  29808837 ttttcaatgcaatcataactttttcttttcaatcgtaccct 29808877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 33056032 - 33056104
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaac 157  Q
    |||||||| ||||||| || |||| ||||||||||||||   ||||| | ||||| ||||||||| |||||||    
T  33056032 ataatttggtaaaataacatctctctttcttttaattaagacattttttaatatgtgtgtaaaattcttaaac 33056104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 37038781 - 37038709
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaac 157  Q
    |||||||| ||||||| || |||| |||||||||||||||| ||||  | ||||| ||||||||  |||||||    
T  37038781 ataatttggtaaaataacatctctctttcttttaattaatgtatttcttaatatgtgtgtaaaaatcttaaac 37038709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 43971533 - 43971569
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct 41  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  43971533 caatgcaataataactttttcttttcaattgtgccct 43971569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 46554830 - 46554886
Alignment:
Q  8 tgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46554830 tgcaataataactttttattttcaattgtacccttcaattaatactatatacactac 46554886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 29567925 - 29567984
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  29567925 caatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactac 29567984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 27209018 - 27209077
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatactatatacactac 63  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  27209018 caatgcaataataactttttattttcaattgtaccattcaattaatattatatacactac 27209077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 16757316 - 16757260
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacac 60  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  16757316 caatgcaataataacttattcttttcaattgtacccttcaattaatactatatacac 16757260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25487113 - 25487165
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  25487113 ttttcaatgcaataataactttttcttttcaattgtaccctccaattaatact 25487165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26352207 - 26352155
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  26352207 ttttcaatgcaataataactttttcttttcaattgtaccctccaattaatact 26352155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46286944 - 46286888
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  46286944 ttttcaatgcaataataactttttcttttcaattgcacccttcaattaatactatat 46286888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 34047357 - 34047298
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||| || |||||||    
T  34047357 caatgcaataataactttttcttttcaattgtaccctccaattaatactctacacactac 34047298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 15823063 - 15823113
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  15823063 caatgcaataataactttttcttttcaattgtacccttcaattaatactat 15823113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 26595191 - 26595133
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatactatatacacta 62  Q
    |||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||    
T  26595191 caatgcaataataaatttttcttttcaattgtaccattcaattaatactatatacacta 26595133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43358326 - 43358272
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac-cctcaattaatactat 54  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||    
T  43358326 ttttcaatgcaataataacattttattttcaattgtactcttcaattaatactat 43358272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 49900874 - 49900820
Alignment:
Q  10 caataataactttttattttcaattgtacc-ctcaattaatactatatacactac 63  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  49900874 caataataactttttattttcaattgtacctttcaattaataatatatacactac 49900820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 50094258 - 50094308
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  50094258 caatgcaataataactttttcttttcaattgtacccttcaattaatactat 50094308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 24884444 - 24884493
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatacta 53  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  24884444 caatgcaataataactttttattttcaattatacccttcaattaatacta 24884493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 12591204 - 12591156
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  12591204 caatgcaataataactttttcttttcaattgtaccctccaattaatact 12591156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13408391 - 13408351
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  13408391 ttttcaatgcaataataactttttcttttcaattgtaccct 13408351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 49468833 - 49468781
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||||||||||    
T  49468833 caatgcaataataacattttcttttcaattgtacccttcaattaatactatat 49468781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 50249339 - 50249387
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  50249339 caatgcaataataactttttcttttcaattgtaccctccaattaatact 50249387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 52024360 - 52024308
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  52024360 ttttcaatgcaataataaatttttcttttcaattgtaccctccaattaatact 52024308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7191333 - 7191270
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    ||||| ||| |||||||||||||| ||||||||| |||| | ||||||||||||||||||||||    
T  7191333 ttttctatgtaataataactttttcttttcaattatacctttcaattaatactatatacactac 7191270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 25560994 - 25560935
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||||||||| ||||| ||||||||| |||| | ||||||||||||||||||||||    
T  25560994 caatgcaataataattttttcttttcaattatacctttcaattaatactatatacactac 25560935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 26595079 - 26594980
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaacaac-ttcatttttaaatggagtgagta 183  Q
    |||||||| ||||||| || |||| |||||||||||||||| ||||  | ||||| |||||||| |||||||| || |||||||| ||| |||| |||||    
T  26595079 ataatttggtaaaataacatctctctttcttttaattaatgtatttcttaatatgtgtgtaaaaaccttaaacgacattcattttgaaacggagggagta 26594980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 39477829 - 39477771
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||||||||| ||||| ||||||||||||| || ||||||||||||||||||||||    
T  39477829 caatgcaataataatttttt-ttttcaattgtacacttcaattaatactatatacactac 39477771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 9915472 - 9915522
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  9915472 caatgcaataataaatttttcttttcaattgtacccttcaattaatactat 9915522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10842805 - 10842859
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac-cctcaattaatactat 54  Q
    ||||||||||||||||||| |||| ||||||||||||| | ||||||||||||||    
T  10842805 ttttcaatgcaataataacattttcttttcaattgtactcttcaattaatactat 10842859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 18794663 - 18794605
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||||||||||||| |||||| ||| |||| |||||||||| ||||||||||||    
T  18794663 aatgcaataataactttttcttttcagttgcacccttcaattaatattatatacactac 18794605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 32807060 - 32807010
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  32807060 caatgcaataataactttttcttttcaattgtacccttcaaataatactat 32807010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 35848055 - 35848005
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  35848055 caatgcaataataactttttcttttcaattgtacctttcaattaatactat 35848005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40717422 - 40717368
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||    
T  40717422 ttttcaatgcaataataattttttcttttcaactgtacccttcaattaatactat 40717368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 44108628 - 44108678
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  44108628 caatacaataataactttttcttttcaattgtacccttcaattaatactat 44108678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 46045998 - 46046052
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||| |||||||||||||||||||||||||||| ||||| || |||||||||||    
T  46045998 ttttcgatgcaataataactttttattttcaattatacccttcgattaatactat 46046052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48009035 - 48009089
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtacc-ctcaattaatactat 54  Q
    |||| ||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  48009035 tttttaatgcaataataactttttcttttcaattgtaccgttcaattaatactat 48009089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 48025376 - 48025326
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  48025376 caatgcaataataactttttcgtttcaattgtacccttcaattaatactat 48025326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 49426541 - 49426487
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||    
T  49426541 ttttcaatgcaataataattttttcttttcaactgtacccgtcaattaatactat 49426487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 1740763 - 1740714
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatacta 53  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  1740763 caatgaaataataactttttattttcaattgtaccattcaattaatacta 1740714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 24611641 - 24611592
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  24611641 aatgtaataataactttttcttttcaattgtacccttcaattaatactat 24611592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 44557166 - 44556989
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactacaaataaaaaacaaacca--------ttaa-ataatttgat 94  Q
    ||||||||||||||| |||| |||||||||||||| | |||||||| ||||||||  ||   || ||||||||||||        |||| |||||||| |    
T  44557166 caatgcaataataacattttcttttcaattgtaccattcaattaatgctatatacttta---atgaaaaacaaaccaacagtttattaagataatttggt 44557070  T
Q  95 aaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaacaac-ttcatttttaaatg 174  Q
    |||||| ||  ||| |||||||||||||||| ||||| | ||||| || ||||| |||||||| || |||||||| |||||    
T  44557069 aaaataacatttctctttcttttaattaatgcattttttaatatgtgtataaaaaccttaaacgacattcattttaaaatg 44556989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 27209536 - 27209608
Alignment:
Q  115 tttaattaatgaattttctgatatgcgtgtaaaatccttaaacaac-ttcatttttaaatggagtgagtaata 186  Q
    ||||||||||| ||||| | ||||| |||||||| |||||||||||  ||||||| |||||||| ||||||||    
T  27209536 tttaattaatgcattttttaatatgtgtgtaaaaaccttaaacaacactcattttgaaatggagggagtaata 27209608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27720983 - 27721035
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    ||||||||  |||||||||||||| |||||||||||||||| |||||||||||    
T  27720983 ttttcaatataataataactttttcttttcaattgtaccctccaattaatact 27721035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 14373535 - 14373489
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaata 50  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||||    
T  14373535 caatgcaacaataactttttattttcaattataccctccaattaata 14373489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31491896 - 31491842
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgta-ccctcaattaatactat 54  Q
    |||||||||  ||||||||||||| |||||||||||| || ||||||||||||||    
T  31491896 ttttcaatgtcataataactttttcttttcaattgtatccttcaattaatactat 31491842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 31699414 - 31699360
Alignment:
Q  2 tttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactata 55  Q
    |||| ||| |||||||| ||||| ||||||||||||||| |||||||||||||||    
T  31699414 tttctatgtaataataattttttcttttcaattgtacccttcaattaatactata 31699360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43759357 - 43759407
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    ||||| |||||||||||| ||||| ||||||||||||||| ||||||||||    
T  43759357 ttttcgatgcaataataattttttcttttcaattgtacccttcaattaata 43759407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 49402993 - 49402947
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaata 50  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||    
T  49402993 caatgcaataataactttttcttttcaattgtactctccaattaata 49402947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 51244962 - 51244904
Alignment:
Q  2 tttcaatgcaataataactttttattttcaattgtac-cctcaattaatactatataca 59  Q
    ||||||| ||||||||||||||| |||||||||||||   ||| |||||||||||||||    
T  51244962 tttcaatacaataataactttttcttttcaattgtacatttcagttaatactatataca 51244904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 52125258 - 52125212
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||| |||||||| |||||||||||| ||||||||||    
T  52125258 caatgcaataataattttttattctcaattgtacccttcaattaata 52125212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 14593442 - 14593405
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccctc 42  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  14593442 caatgcaataataattttttcttttcaattgtaccctc 14593405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33622491 - 33622454
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac 38  Q
    |||||||||||||||||||||| | |||||||||||||    
T  33622491 ttttcaatgcaataataactttatcttttcaattgtac 33622454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 44258629 - 44258592
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccctc 42  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  44258629 caatgcaataataattttttcttttcaattgtaccctc 44258592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 25151844 - 25151880
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct 41  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  25151844 caatgcaataataacattttcttttcaattgtaccct 25151880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 34032202 - 34032154
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||| ||||| |||||||||||||| | |||||||||||    
T  34032202 caatgcaataataattttttcttttcaattgtaccgtccaattaatact 34032154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 34110556 - 34110592
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct 41  Q
    |||||||||||||||||||| |||| |||||||||||    
T  34110556 caatgcaataataactttttctttttaattgtaccct 34110592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 52066414 - 52066359
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    ||||||||||| |||||| ||||| ||||||||||||||| |||||||||| |||||    
T  52066414 ttttcaatgcagtaataa-tttttcttttcaattgtacccttcaattaatattatat 52066359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 39463288 - 39463347
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  39463288 caatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactac 39463347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6374439 - 6374497
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccctcaattaatactatataca 59  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  6374439 ttttcaatgcaataataactttttcttttcaattgtaccttcaattaatattatataca 6374497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 396336 - 396290
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccctcaattaatact 52  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  396336 aatgcaataataactttttcttttcaattgtaccctcaattaatact 396290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6116133 - 6116070
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||  |||||||||||||||||||    
T  6116133 ttttcaatgcaataataactttttcttttcaattatacccttcgtttaatactatatacactac 6116070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 5295529 - 5295471
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||||| ||||||||||||    
T  5295529 aatgcaataataattttttcttttcaattgtacccttcaattaatattatatacactac 5295471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 9812203 - 9812261
Alignment:
Q  6 aatgcaataataactttttattttcaattgtacc-ctcaattaatactatatacactac 63  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||    
T  9812203 aatgcaataataactttttattttcaattgtacctttcaagtaatattatatacactac 9812261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 39698790 - 39698740
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  39698790 caatgcaataataactttttcttttcaattgtacccttcaattaatactat 39698740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43084755 - 43084701
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtacc-ctcaattaatactat 54  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  43084755 ttttcaatgcaataataactttttcttttcaattgtacctttcaattaatactat 43084701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 43448745 - 43448794
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatacta 53  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  43448745 caatgcaataataacttttttttttcaattgtacccttcaattaatacta 43448794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 15160570 - 15160522
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  15160570 caatgcaataataactttttcttttcaattgtaccctccaattaatact 15160522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17655932 - 17655984
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  17655932 ttttcaatgcaataataactttttcttttcaactgtaccctccaattaatact 17655984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 19438265 - 19438317
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  19438265 caatgtaataataactttttcttttcaattgtacccttcaattaatactatat 19438317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 19574416 - 19574468
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  19574416 caatgtaataataactttttcttttcaattgtacccttcaattaatactatat 19574468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 40362460 - 40362512
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  40362460 ttttcaatgcaataataactttttcttttcaattttaccctccaattaatact 40362512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 29312317 - 29312258
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||||||||||  ||| ||||||||||||| || ||||||||||||||||||||||    
T  29312317 caatgcaataataaccgtttgttttcaattgtactcttcaattaatactatatacactac 29312258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 4989507 - 4989553
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  4989507 caatgcaataataactttttcttttcaattgtacccttcaattaata 4989553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 29025870 - 29025820
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  29025870 caatgcaataataactttttcttttcaattctacccttcaattaatactat 29025820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31693749 - 31693711
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtacc 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  31693749 ttttcaatgcaataataactttttcttttcaattgtacc 31693711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 15227710 - 15227783
Alignment:
Q  84 aataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaac 157  Q
    ||||||||||||||||| || || | |||||||||||||||| ||||  | ||||||||||||||  |||||||    
T  15227710 aataatttgataaaataacatctttttttcttttaattaatgcatttcttaatatgcgtgtaaaaatcttaaac 15227783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 34156676 - 34156721
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattt 130  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||    
T  34156676 ataatttgataaaataacagctctatttcttttaattaatgcattt 34156721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 40228599 - 40228636
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  40228599 ttttcaatgcaataataactttttcttttcaattgtac 40228636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 514899 - 514965
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgta-ccctcaat---taatactatatacactac 63  Q
    |||||||||||||||||| ||||| |||||||||||| || |||||   ||||||||||||||||||    
T  514899 ttttcaatgcaataataattttttcttttcaattgtatccttcaattaataatactatatacactac 514965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 34156563 - 34156623
Alignment:
Q  5 caatgcaataataacttttta-ttttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||||||||| |||||  |||||||||||||||| ||||||||||||| ||||||||    
T  34156563 caatgcaataataatttttttcttttcaattgtacccttcaattaatactatgtacactac 34156623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 36921382 - 36921434
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||| ||||| |||||||||||||| | |||||||||||    
T  36921382 ttttcaatgcaataataattttttcttttcaattgtaccttccaattaatact 36921434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 37559657 - 37559609
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  37559657 caatacaataataactttttcttttcaattgtaccctccaattaatact 37559609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 13368068 - 13368013
Alignment:
Q  9 gcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||||| |||| |||||||||| |||| |||||||||| ||||||||||||    
T  13368068 gcaataataacattttcttttcaattgcacccttcaattaatattatatacactac 13368013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 13496264 - 13496323
Alignment:
Q  5 caatgcaataataactttttattttcaattgtac-cctcaattaatactatatacactac 63  Q
    ||||||||||||||| |||| |||||||||||||   |||||||||||| ||||||||||    
T  13496264 caatgcaataataacgttttcttttcaattgtacaattcaattaatactgtatacactac 13496323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 15227593 - 15227652
Alignment:
Q  2 tttcaatgcaataataactttttattttcaattgtac-cctcaattaatactatatacac 60  Q
    ||||||||||||||||| | ||| |||||||| |||| | ||||||||||||||||||||    
T  15227593 tttcaatgcaataataaatgtttcttttcaatggtacacttcaattaatactatatacac 15227652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 45359022 - 45358959
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgta-ccctcaattaatactatatacactac 63  Q
    |||||||||||||||||| ||||| ||||||||||||    |||||||||| ||||||||||||    
T  45359022 ttttcaatgcaataataattttttcttttcaattgtatttttcaattaatattatatacactac 45358959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 4760682 - 4760632
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||| ||||| ||||| ||||||||||||||| ||||||||||||||    
T  4760682 caatgcaacaataattttttcttttcaattgtacccttcaattaatactat 4760632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17920981 - 17921031
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac-cctcaattaata 50  Q
    |||||||||||||||||||||||| ||| ||||||||| | ||||||||||    
T  17920981 ttttcaatgcaataataactttttctttacaattgtactcttcaattaata 17921031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 33746126 - 33746080
Alignment:
Q  110 tttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaa 156  Q
    |||||||||||||||| ||||| | |||||||||||||| |||||||    
T  33746126 tttcttttaattaatgcattttttaatatgcgtgtaaaaaccttaaa 33746080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 35356336 - 35356382
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  35356336 caatgcaataataactttttcttttcaattatacccttcaattaata 35356382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 44713563 - 44713609
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  44713563 caatgcaataataacttttttttttcaattatacccttcaattaata 44713609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 9304757 - 9304712
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaat 49  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||    
T  9304757 caatgcaataataattttttcttttcaattgtacccttcaattaat 9304712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43594854 - 43594887
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaatt 34  Q
    |||||||| |||||||||||||||||||||||||    
T  43594854 ttttcaatacaataataactttttattttcaatt 43594887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 157
Target Start/End: Complemental strand, 6116016 - 6115944
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaac 157  Q
    |||| ||| ||||||| || |||  |||||||||||||||| ||||| | ||||| |||||||| ||||||||    
T  6116016 ataagttggtaaaataacatctccctttcttttaattaatgcattttttaatatgtgtgtaaaaaccttaaac 6115944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39765987 - 39765936
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||||||| ||||| | |||||||| |||||||||||    
T  39765987 ttttcaatgcaataataactttttcttttc-actgtaccctccaattaatact 39765936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 47817767 - 47817826
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  47817767 caatgcaataataactttttcttttcaattgtacccttcaattaatactatatacactac 47817826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 10573282 - 10573227
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatataca 59  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  10573282 caatgcaataataactttttcttttcaattgtacccttcaattaatactatataca 10573227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22220491 - 22220428
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||    
T  22220491 ttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactatgcacactac 22220428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 34413674 - 34413616
Alignment:
Q  6 aatgcaataataactttttattttcaattgtacc-ctcaattaatactatatacactac 63  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||    
T  34413674 aatgcaataataactttttattttcaattgtaccattcaattaatattatatacactac 34413616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 4505366 - 4505413
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccctcaattaatact 52  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  4505366 caatgcaataataactttttcttttcaattgtaccctccattaatact 4505413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38510377 - 38510314
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||||||| || |||||||    
T  38510377 ttttcaatgcaataataactttttcttttcaattgtaccatccaattaatactctacacactac 38510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41496230 - 41496293
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac-cctcaattaatactatatacactac 63  Q
    |||||||| ||||||||||||||| ||||||||||||| | |||||||||| ||||||||||||    
T  41496230 ttttcaatacaataataactttttcttttcaattgtactcttcaattaatattatatacactac 41496293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 50203103 - 50203158
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatataca 59  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  50203103 caatgcaataataactttttcttttcaattgtacccttcaattaatattatataca 50203158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 24940908 - 24940958
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  24940908 caatgcaataataactttttcttttcaattgtacccttcaattaatactat 24940958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 29519653 - 29519603
Alignment:
Q  5 caatgcaataataactttttattttcaattgta-ccctcaattaatactat 54  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  29519653 caatgcaataataactttttattttcaattgtatccttcaattaatactat 29519603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 45043720 - 45043666
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  45043720 ttttcaatgcaataataattttttcttttcaattgtacccttcaattaatactat 45043666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 53814625 - 53814575
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  53814625 caatgcaataataactttttatttttaattgtacccttcaattaatactat 53814575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 19451339 - 19451286
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatata 57  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  19451339 caatgcaataataactttttcttttcaattgtacccttcaattaataccatata 19451286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 49080604 - 49080559
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  49080604 aatgcaataataactttttattttcaattgtacccttcaattaata 49080559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25123858 - 25123798
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatactatatacac 60  Q
    |||||||| ||||||||| ||||| |||||| ||||||||| |||||||||||||||||||    
T  25123858 ttttcaatacaataataattttttcttttcagttgtacccttcaattaatactatatacac 25123798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27943678 - 27943614
Alignment:
Q  1 ttttcaatgcaataataactt-tttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||||||||||||||| ||| ||||||||| ||||| |||||||||| ||||||||||||    
T  27943678 ttttcaatgcaataataacttcttttttttcaattatacccttcaattaatattatatacactac 27943614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 34316251 - 34316303
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  34316251 caatgcaataataattttttattttcaattgtacccttcaattaatattatat 34316303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8971067 - 8971130
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac-cctcaattaatactatatacactac 63  Q
    ||||||||| |||||||| ||||| ||||||||||||| | |||||||||| ||||||||||||    
T  8971067 ttttcaatgaaataataattttttcttttcaattgtactcttcaattaataatatatacactac 8971130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 11364251 - 11364314
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||| |||| |||||||||||||| ||||||||||||||| |||||||||| |||||| |||||    
T  11364251 tttttaatgaaataataactttttcttttcaattgtacccttcaattaatattatatatactac 11364314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 30261288 - 30261343
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatataca 59  Q
    ||||||||||||||  |||| ||||||||||||||| |||||||||||||||||||    
T  30261288 caatgcaataataatgttttcttttcaattgtacccttcaattaatactatataca 30261343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 1819591 - 1819641
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  1819591 caatgcaataataaatttttcttttcaattgtacccttcaattaatactat 1819641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 2493131 - 2493181
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  2493131 caatgcaataataattttttcttttcaattgtacccttcaattaatactat 2493181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 19878677 - 19878727
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  19878677 caatgcaataataactttttcttttcaattgtacccttcaatttatactat 19878727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20448064 - 20448118
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||    
T  20448064 ttttcaatgcaataataattttttcttttcaattatacccttcaattaatactat 20448118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 37654438 - 37654488
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  37654438 caatacaataataactttttcttttcaattgtacccttcaattaatactat 37654488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 40345475 - 40345425
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  40345475 caatgcaataataattttttcttttcaattgtacccttcaattaatactat 40345425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 45839671 - 45839721
Alignment:
Q  10 caataataactttttattttcaattgtacc-ctcaattaatactatataca 59  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  45839671 caataataactttttattttcaattgtaccattcaattaatattatataca 45839721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 50623108 - 50623158
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  50623108 ttttcaatgcaataataactttttcttttcaattatacccttcaattaata 50623158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 52957918 - 52957872
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  52957918 caatgcaataataactttttcttttcaattgtacccttcaattaata 52957872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 7906121 - 7906076
Alignment:
Q  8 tgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||    
T  7906121 tgcaataataactttttcttttcaattgtaccctccaattaatact 7906076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 18430023 - 18430068
Alignment:
Q  10 caataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  18430023 caataataactttttcttttcaattgtacccttcaattaatactat 18430068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 19930745 - 19930789
Alignment:
Q  7 atgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  19930745 atgcaataataactttttcttttcaattgtacccttcaattaata 19930789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 21864511 - 21864463
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  21864511 caatgcaataataactttttcttttcaattgtatcctccaattaatact 21864463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 21920372 - 21920324
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  21920372 caatgcaataataactttttcttttcaattgtatcctccaattaatact 21920324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 37624585 - 37624633
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  37624585 caatgcaataataactttttcttttcaattgtatcctccaattaatact 37624633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 39982132 - 39982168
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  39982132 caatgcaataataactttttcttttcaattgtaccct 39982168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 25231204 - 25231263
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||||||||||||||| ||||| ||||||||||  |||||||||| | ||||||||    
T  25231204 caatgcaataataactttttcttttctattgtaccctataattaatactttgtacactac 25231263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 44571993 - 44571947
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||||    
T  44571993 caatgcaataaaaactttttcttttcaattgtacccttcaattaata 44571947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 52848182 - 52848136
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  52848182 caatgcaataataattttttcttttcaattgtacccttcaattaata 52848136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 19451216 - 19451127
Alignment:
Q  89 tttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaacaac-ttcatttttaaatggag 177  Q
    |||| ||||||| || |||| |||||||||||||||| ||||  | ||||| |||||||| | ||||||||| |||||||| ||| ||||    
T  19451216 tttggtaaaataacatctctctttcttttaattaatgcatttcttaatatgtgtgtaaaaactttaaacaacattcattttgaaacggag 19451127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30780264 - 30780227
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  30780264 ttttcagtgcaataataactttttcttttcaattgtac 30780227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 40837159 - 40837209
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc--tcaattaatactat 54  Q
    |||||||||||||||||||| |||||||| ||||||  ||||||||||||||    
T  40837159 caatgcaataataacttttt-ttttcaatcgtacccgatcaattaatactat 40837209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 41496346 - 41496418
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaac 157  Q
    |||||||| | ||||| ||  |||||||||||||||||||  ||||| | ||||| |||||||| ||||||||    
T  41496346 ataatttggtgaaataacatttctatttcttttaattaatacattttttaatatgtgtgtaaaaaccttaaac 41496418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 52915670 - 52915638
Alignment:
Q  5 caatgcaataataactttttattttcaattgta 37  Q
    |||||||||||||||||||| ||||||||||||    
T  52915670 caatgcaataataactttttcttttcaattgta 52915638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 48901749 - 48901807
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacacta 62  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  48901749 caatgcaataataactttttcttttcaattgtaccctccaattaatactatatacacta 48901807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 48903315 - 48903373
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacacta 62  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  48903315 caatgcaataataactttttcttttcaattgtaccctccaattaatactatatacacta 48903373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19373611 - 19373674
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||  |||||||||||    
T  19373611 ttttcaatgaaataataactttttattttcaattgtacccttcaattaatatcatatacactac 19373674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 30934930 - 30934871
Alignment:
Q  5 caatgcaataataactttttattttcaattgta-ccctcaattaatactatatacactac 63  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  30934930 caatgcaataataattttttcttttcaattgtacccctcaattaatactatatacactac 30934871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 40487857 - 40487916
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatactatatacactac 63  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  40487857 caatgcaataataactttttcttttcaattgtacctttcaattaatactatatacactac 40487916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3152931 - 3152877
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  3152931 ttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactat 3152877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47137988 - 47138042
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  47137988 ttttcaatgcaataataactttttattttcaattgtacccttcaaataatactat 47138042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 38016404 - 38016453
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccctcaattaatactat 54  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  38016404 caatgcaataataactttttcttttcaattgtaccttcaattaatactat 38016453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 27067637 - 27067693
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacac 60  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  27067637 caatgcaataataactttttcttttcaattgtacccttcaattaatactacatacac 27067693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 50038296 - 50038244
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  50038296 ttttcaatgcaataataactttttcttttcaattgtaccctccaattaatact 50038244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 45213842 - 45213791
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  45213842 aatgcaataataactttttcttttcaattgtacccttcaattaatactatat 45213791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 51398035 - 51398089
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  51398035 ttttcaatgtaataataactttttcttttcaattgtacccttcaattaatactat 51398089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 4392231 - 4392284
Alignment:
Q  11 aataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||    
T  4392231 aataataactttttcttttcaattgtacccttcaattaatactatatatactac 4392284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 53200805 - 53200756
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccctcaattaata 50  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  53200805 ttttcaatgcaataataactttttcttttcaattgtacattcaattaata 53200756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 42571650 - 42571602
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  42571650 caatgcaataataactttttcttttcaattgtaccctccaattaatact 42571602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 11393574 - 11393621
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatac 51  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  11393574 caatgcaataataactttttcttttcaattgtacccttcaattaatac 11393621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 22857115 - 22857178
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac-cctcaattaatactatatacactac 63  Q
    ||||||||| |||||||||||||| |||||||||||||   |||||||||| ||||||||||||    
T  22857115 ttttcaatgtaataataactttttcttttcaattgtactgttcaattaatattatatacactac 22857178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 30315338 - 30315397
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||| ||||||||||| |||| |||| |||||| ||||||||||||||||||||||    
T  30315338 caatgcaagaataactttttcttttgaattatacccttcaattaatactatatacactac 30315397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36844867 - 36844804
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgta-ccctcaattaatactatatacactac 63  Q
    |||||||||||||||||| ||||| |||||||||||| |  |||||||||| ||||||||||||    
T  36844867 ttttcaatgcaataataattttttcttttcaattgtatcattcaattaatattatatacactac 36844804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 42072014 - 42072069
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatataca 59  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||| ||||||||    
T  42072014 caatgcaataataactttttcttttcaactgtacccttcaattaatattatataca 42072069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 50646231 - 50646176
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatactatataca 59  Q
    |||||||||||||||||||| ||||||||||||||  | |||||||||||||||||    
T  50646231 caatgcaataataactttttcttttcaattgtaccatttaattaatactatataca 50646176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 30426445 - 30426395
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  30426445 caatgcaataataactttttctttttaattgtacccttcaattaatactat 30426395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36460831 - 36460881
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||||||| |||||||||| |||| ||||||||||    
T  36460831 ttttcaatgcaataataactttttcttttcaattgcacccttcaattaata 36460881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 36729931 - 36729885
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  36729931 caatgcaataataactttttcttttcaattgtacccttcaattaata 36729885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39356910 - 39356964
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtacc-ctcaattaatactat 54  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||    
T  39356910 ttttcaatgcaataataacattttcttttcaattgtacctttcaattaatactat 39356964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 41850419 - 41850465
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  41850419 caatgcaataataactttttcttttcaattgtacccttcaattaata 41850465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 47895465 - 47895415
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  47895465 caatgcaataataactttttcttttcaattatacccttcaattaatactat 47895415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 50088437 - 50088387
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  50088437 caatgcaatagtaactttttcttttcaattgtacccttcaattaatactat 50088387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 4759020 - 4759068
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatact 52  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  4759020 caatgcaataataactttttcttttcaattgtacctttcaattaatact 4759068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11019951 - 11019895
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtacc-ctcaattaatactatat 56  Q
    |||||||||||||||||| ||||| |||||||| |||||  ||||||||||||||||    
T  11019951 ttttcaatgcaataataattttttcttttcaatcgtacctttcaattaatactatat 11019895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30431145 - 30431201
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgt-accctcaattaatactatat 56  Q
    |||||||||||||||||| ||||| ||||||||||| ||| |||||||||| |||||    
T  30431145 ttttcaatgcaataataattttttcttttcaattgtaaccttcaattaatattatat 30431201  T

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Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 32492306 - 32492254
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtacc-ctcaattaatact 52  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||||||||||    
T  32492306 ttttcaatgcaataataactttttcttttcaattataccattcaattaatact 32492254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 44676250 - 44676298
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    ||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  44676250 caatgcaatgataactttttcttttcaattgtaccctccaattaatact 44676298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45566824 - 45566880
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgta-ccctcaattaatactatat 56  Q
    |||||||| ||||||||||||||| |||||||||||| |  ||||||||||||||||    
T  45566824 ttttcaatacaataataactttttcttttcaattgtatcattcaattaatactatat 45566880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 19115416 - 19115463
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccctcaattaatact 52  Q
    |||||||||||||||||||| ||||||||| ||||  |||||||||||    
T  19115416 caatgcaataataactttttcttttcaattatacctccaattaatact 19115463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 38140979 - 38141038
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    ||||||||||||||| |||| ||||  ||||| |||| ||||||||||||||||||||||    
T  38140979 caatgcaataataaccttttttttttcattgtgcccttcaattaatactatatacactac 38141038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 33194152 - 33194106
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  33194152 caatgcaatgataactttttatttttaattgtacccttcaattaata 33194106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47823576 - 47823514
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatactatatacacta 62  Q
    |||| ||||||||||||| ||||| |||| |||||||  || |||||||||||||||||||||    
T  47823576 tttttaatgcaataataattttttctttttaattgtattcttcaattaatactatatacacta 47823514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 45460689 - 45460738
Alignment:
Q  2 tttcaatgcaataataactttttattttcaattgtaccct-caattaata 50  Q
    ||||||| ||||||||||| ||| |||||||||||||||| |||||||||    
T  45460689 tttcaatacaataataactctttcttttcaattgtaccctccaattaata 45460738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 2458036 - 2458088
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    |||| ||||||||||||||| |||| |||| ||||| ||||||||||||||||    
T  2458036 caatacaataataactttttctttttaattatacccttcaattaatactatat 2458088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 7231016 - 7230968
Alignment:
Q  6 aatgcaataataactttttattttcaattgta-ccctcaattaatacta 53  Q
    ||||||||||||||||||| |||||||||||| |  |||||||||||||    
T  7231016 aatgcaataataactttttcttttcaattgtatcattcaattaatacta 7230968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 38141090 - 38141130
Alignment:
Q  84 aataatttgataaaatatcaactctatttcttttaattaat 124  Q
    ||||||||| ||||||| || ||||||||||||||||||||    
T  38141090 aataatttggtaaaataacatctctatttcttttaattaat 38141130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4166 - 4229
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||| ||||||||||||    
T  4166 ttttcaatgcaataataattttttcttttcaattgtacccttcaattaatattatatacactac 4229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 32193732 - 32193790
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  32193732 aatgcaataataattttttcttttcaattgtacccttcaattaatactatatacactac 32193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9940673 - 9940736
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||||||  ||||||||||||||| |||||||||| |||| |||||||    
T  9940673 ttttcaatgcaataataacttttctttttcaattgtacccttcaattaatattatacacactac 9940736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 234063 - 234113
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  234063 caatgcaataataactttttcttttcaattgtacccttcaattaatactat 234113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 29713530 - 29713480
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  29713530 caatgcaataataactttttcttttcaattgtacccttcaattaatactat 29713480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 577086 - 577149
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||||| |  |||||||| ||||| |||||||||| ||||||||||||    
T  577086 ttttcaatgcaataataactttatcatttcaattatacccttcaattaatattatatacactac 577149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 1134959 - 1135006
Alignment:
Q  10 caataataactttttattttcaattgtaccc-tcaattaatactatat 56  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  1134959 caataataactttttcttttcaattgtacccttcaattaatactatat 1135006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 3988867 - 3988809
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacacta 62  Q
    |||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||| ||||    
T  3988867 caatgcaataataattttttcttttcaattatacccttcaattaatactatatatacta 3988809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 19675009 - 19675059
Alignment:
Q  5 caatgcaataataactttttattttcaattgtacc-ctcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  19675009 caatgcaataataactttttcttttcaattgtaccattcaattaatactat 19675059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 4850619 - 4850571
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||| |||||||||||||| | |||||||||||    
T  4850619 caatgcaataataactttttcttttcaattgtaccatccaattaatact 4850571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 13503972 - 13503917
Alignment:
Q  5 caatgcaataataactttttat--tttcaattgtaccc-tcaattaatactatata 57  Q
    |||||||||||||||||||| |  |||||||||||||| |||||||||||||||||    
T  13503972 caatgcaataataacttttttttatttcaattgtacccttcaattaatactatata 13503917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 17267733 - 17267673
Alignment:
Q  3 ttcaatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacacta 62  Q
    |||||||||||||||| ||||| ||||||| ||||||| | |||||||| |||||||||||    
T  17267733 ttcaatgcaataataattttttcttttcaactgtaccctttaattaatattatatacacta 17267673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 29399975 - 29400023
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  29399975 caatgcaataataattttttcttttcaattgtaccctccaattaatact 29400023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 187
Target Start/End: Complemental strand, 13011359 - 13011256
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaacaac-ttcatttttaaatggagtgagta 183  Q
    |||||||| ||||||| || |||| |||||||||||||||| ||||  | ||||| ||||||||  ||||||| || |||||||| |||  ||| |||||    
T  13011359 ataatttggtaaaataacatctctctttcttttaattaatgcatttcttaatatgtgtgtaaaaatcttaaacgacgttcattttgaaacagagggagta 13011260  T
Q  184 atat 187  Q
    ||||    
T  13011259 atat 13011256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 18737214 - 18737155
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||| ||| ||||||||| ||||| | |||||||| ||||||||||||    
T  18737214 caatgcaataataactctttcttttcaattataccctttaattaatattatatacactac 18737155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10520767 - 10520717
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccc-tcaattaata 50  Q
    |||||||| ||||||||| ||||| ||||||||||||||| ||||||||||    
T  10520767 ttttcaatacaataataattttttcttttcaattgtacccttcaattaata 10520717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 12063634 - 12063584
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||| ||||| ||||||||||||||| |||||| |||||||    
T  12063634 caatgcaataataatttttttttttcaattgtacccttcaattgatactat 12063584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 12459437 - 12459387
Alignment:
Q  10 caataataactttttattttcaattgtaccct-caattaatactatataca 59  Q
    |||||||| |||||| ||||||||| |||||| ||||||||||||||||||    
T  12459437 caataatatctttttcttttcaattatacccttcaattaatactatataca 12459387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24556056 - 24556002
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtac-cctcaattaatactat 54  Q
    ||||||||| |||||||| ||||| ||||||||||||| | ||||||||||||||    
T  24556056 ttttcaatgtaataataattttttcttttcaattgtactcttcaattaatactat 24556002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 12459330 - 12459237
Alignment:
Q  85 ataatttgataaaatatcaactctatttcttttaattaatgaattttctgatatgcgtgtaaaatccttaaacaac-ttcatttttaaatggag 177  Q
    |||||||| |||||||  | || | |||||||||||||||| ||||  |  |||| |||||||| ||||||||||| |||||||||||| ||||    
T  12459330 ataatttggtaaaataatatctttctttcttttaattaatgtatttcttagtatgtgtgtaaaaaccttaaacaacattcatttttaaacggag 12459237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 34513727 - 34513682
Alignment:
Q  5 caatgcaataataactttttattttcaattgta-ccctcaattaat 49  Q
    |||||||||||||||||||| |||||||||||| || |||||||||    
T  34513727 caatgcaataataactttttcttttcaattgtatccttcaattaat 34513682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 12323008 - 12322951
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccct-caattaatactatatacactac 63  Q
    |||||||||||||  |||||  ||||||||| ||||| ||||||||||||||||||||||    
T  12323008 caatgcaataata--ttttttatttcaattgcacccttcaattaatactatatacactac 12322951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 19689359 - 19689407
Alignment:
Q  5 caatgcaataataactttttattttcaattgtac-cctcaattaatact 52  Q
    |||||||||||||||||||| ||||||| ||||| | ||||||||||||    
T  19689359 caatgcaataataactttttcttttcaactgtactcttcaattaatact 19689407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 32429313 - 32429345
Alignment:
Q  5 caatgcaataataactttttattttcaattgta 37  Q
    |||||||||||||||||||| ||||||||||||    
T  32429313 caatgcaataataactttttcttttcaattgta 32429345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3938 - 3886
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct-caattaatact 52  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  3938 ttttcaatgcaataataactttttcttttcaattgtaccctccaattaatact 3886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 695 - 636
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacactac 63  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||| ||||||||||||    
T  695 caatgcaataataactttttctttttaattgtacccttcaattaatattatatacactac 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 9765 - 9715
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  9765 caatgcaataataactttttcttttcaattgtacccttcaattaatactat 9715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 18378 - 18320
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactatatacacta 62  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| | |||||||||||    
T  18378 caatgcaataataactttttcttttcaattgtacccttcaattaacattatatacacta 18320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 24864 - 24814
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  24864 caatgcaataataactttttcttttcaattgtacccttcaattaatactat 24814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 3628 - 3578
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  3628 caatacaataataactttttcttttcaattgtacccttcaattaatactat 3578  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 21204 - 21155
Alignment:
Q  6 aatgcaataataactttttattttcaattgtaccc-tcaattaatactat 54  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  21204 aatgcaataataattttttcttttcaattgtacccttcaattaatactat 21155  T

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Target: scaffold0136 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9470 - 9510
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtaccct 41  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  9470 ttttcaatgcaataataattttttcttttcaattgtaccct 9510  T

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Target: scaffold0300 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4590 - 4653
Alignment:
Q  1 ttttcaatgcaataataactttttattttcaattgtacc-ctcaattaatactatatacactac 63  Q
    |||| ||||||||||||| ||||| ||||||||||||||  ||||| |||| ||||||||||||    
T  4590 tttttaatgcaataataattttttcttttcaattgtacctttcaatcaatattatatacactac 4653  T

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Target: scaffold2107 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 637 - 589
Alignment:
Q  5 caatgcaataataactttttattttcaattgtaccc-tcaattaatact 52  Q
    |||||||||||||| ||||| ||| ||||||||||| ||||||||||||    
T  637 caatgcaataataattttttctttacaattgtacccttcaattaatact 589  T

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Target: scaffold0983 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 804 - 752
Alignment:
Q  11 aataataactttttattttcaattgtaccc-tcaattaatactatatacacta 62  Q
    |||||||| ||||| ||||||||||||||| | |||||||| |||||||||||    
T  804 aataataattttttcttttcaattgtaccctttaattaatattatatacacta 752  T

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