View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1362_high_38 (Length: 356)
Name: NF1362_high_38
Description: NF1362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1362_high_38 |
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Alignment Details
Target: chr6 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 70 - 345
Target Start/End: Complemental strand, 34570107 - 34569831
Alignment:
| Q |
70 |
aacatataattttgaaatgatgaattatgtgatattttccatagataactaatctattattgaaataattgtaaattatgattattgtttgtgagatgcc |
169 |
Q |
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| T |
34570107 |
aacatataattttgaaatgatgaattatgtgatattttccatagataactaatctattattgaaataattgtaaattatgattattgtttgtgagatgcc |
34570008 |
T |
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| Q |
170 |
gatcatttagttttattgatcgcctataattttt-ccgatgatagttaagtctagtagaatgagttagtctcctacaatttcgcaaaccacaatttgatt |
268 |
Q |
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| T |
34570007 |
tatcatttagttttattgatcgcctataattttttccgatgatagttaagtctagtagaatgagttagtctcctacaatttcgcaaaccacaatttgatt |
34569908 |
T |
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| Q |
269 |
actcattatatatagtggcacccatatttagtgtcctatttctactcaaataagattgcctctagattgcctttcat |
345 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34569907 |
actcattatatatagtggcacccatatttagtgtcctatttctactcaaataagattgcctctagattgcctttcat |
34569831 |
T |
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