View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1362_high_60 (Length: 251)
Name: NF1362_high_60
Description: NF1362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1362_high_60 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16440061 - 16440306
Alignment:
| Q |
1 |
tgcttggatgaactcatagtgatccttgagttgaagagaaacggtcgccttgttataccagttttttatgacgtggatccttctcatttgcgacacggga |
100 |
Q |
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|||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16440061 |
tgcttggaagaactcacagcgatccttgagttgaagagaaacggtcgccttgttataccagttttttatgacgtggatccttctcatttgcgacacggga |
16440160 |
T |
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| Q |
101 |
caggaagttacggtcttgcactcgctacgcacaaggagaggttcaaagatgacatccagaaggtcaaccgttggaggactgctttacaggaggcggctaa |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
16440161 |
caggaagttacggtcttgcactcgctaagcacaaggagaggttcaaagatgacatccagaaggtcaaccgttggaggactgctttacacgaggcggctaa |
16440260 |
T |
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| Q |
201 |
catctccggtcttcacttccagttccagtatgggttctctgctcct |
246 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
16440261 |
catctccggtcttcacttccagttccagtatgggttctctgatcct |
16440306 |
T |
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