View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1362_low_52 (Length: 309)

Name: NF1362_low_52
Description: NF1362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1362_low_52
NF1362_low_52
[»] chr1 (39 HSPs)
chr1 (15-280)||(27479811-27480092)
chr1 (15-99)||(17483945-17484029)
chr1 (15-99)||(37850177-37850261)
chr1 (15-88)||(27670054-27670127)
chr1 (15-99)||(30996957-30997040)
chr1 (15-99)||(38920447-38920531)
chr1 (15-99)||(52429100-52429184)
chr1 (17-99)||(29437594-29437676)
chr1 (15-100)||(2636926-2637010)
chr1 (15-99)||(4279868-4279952)
chr1 (15-99)||(45810203-45810287)
chr1 (15-99)||(46271092-46271176)
chr1 (15-99)||(49549214-49549298)
chr1 (15-99)||(51467213-51467297)
chr1 (15-106)||(48363745-48363838)
chr1 (15-99)||(15302485-15302568)
chr1 (15-99)||(23893437-23893521)
chr1 (15-90)||(39626985-39627060)
chr1 (27-99)||(15911271-15911343)
chr1 (15-99)||(38509125-38509209)
chr1 (15-99)||(39425570-39425654)
chr1 (15-98)||(21290334-21290417)
chr1 (15-91)||(41619913-41619989)
chr1 (18-81)||(35945424-35945487)
chr1 (15-100)||(5854045-5854130)
chr1 (15-63)||(4389822-4389870)
chr1 (15-99)||(19349695-19349783)
chr1 (45-108)||(7763482-7763545)
chr1 (41-99)||(22567308-22567366)
chr1 (15-93)||(43789872-43789949)
chr1 (15-96)||(4371510-4371590)
chr1 (20-99)||(35693283-35693362)
chr1 (20-99)||(37951689-37951768)
chr1 (20-99)||(50008222-50008301)
chr1 (26-99)||(22940561-22940634)
chr1 (20-101)||(42872071-42872152)
chr1 (54-99)||(47754578-47754623)
chr1 (15-99)||(14171743-14171827)
chr1 (20-100)||(37000880-37000960)
[»] chr8 (30 HSPs)
chr8 (15-96)||(36786680-36786761)
chr8 (15-99)||(36941481-36941565)
chr8 (15-99)||(43292738-43292822)
chr8 (15-105)||(11293866-11293956)
chr8 (15-99)||(29073833-29073917)
chr8 (15-93)||(35179813-35179891)
chr8 (15-99)||(5244366-5244450)
chr8 (15-99)||(23425022-23425106)
chr8 (15-99)||(23995789-23995873)
chr8 (15-99)||(44165209-44165293)
chr8 (18-105)||(23497946-23498033)
chr8 (18-99)||(12802824-12802904)
chr8 (15-99)||(5110094-5110178)
chr8 (17-101)||(26626006-26626091)
chr8 (18-99)||(17336633-17336714)
chr8 (18-99)||(19176906-19176987)
chr8 (15-96)||(23894651-23894732)
chr8 (15-99)||(26502693-26502777)
chr8 (19-99)||(41898234-41898314)
chr8 (17-65)||(36409811-36409859)
chr8 (15-99)||(13143559-13143643)
chr8 (15-99)||(5449645-5449729)
chr8 (19-90)||(45145745-45145816)
chr8 (192-240)||(34856501-34856549)
chr8 (192-235)||(6863157-6863200)
chr8 (20-99)||(28191914-28191993)
chr8 (193-240)||(41957468-41957515)
chr8 (65-99)||(24724064-24724098)
chr8 (37-99)||(45425268-45425330)
chr8 (15-99)||(23687905-23687989)
[»] scaffold0294 (1 HSPs)
scaffold0294 (15-99)||(11402-11486)
[»] scaffold0236 (1 HSPs)
scaffold0236 (15-99)||(17677-17761)
[»] scaffold0049 (1 HSPs)
scaffold0049 (15-99)||(54-138)
[»] chr7 (36 HSPs)
chr7 (15-99)||(19293336-19293420)
chr7 (15-99)||(19845407-19845491)
chr7 (15-99)||(27813713-27813797)
chr7 (17-101)||(49044858-49044942)
chr7 (15-99)||(2345283-2345367)
chr7 (15-99)||(30534916-30535000)
chr7 (15-99)||(42887820-42887904)
chr7 (15-101)||(40299090-40299176)
chr7 (15-99)||(32643544-32643628)
chr7 (15-99)||(47648918-47649002)
chr7 (17-99)||(34693616-34693698)
chr7 (15-99)||(8781952-8782034)
chr7 (15-96)||(33682924-33683005)
chr7 (15-99)||(9682814-9682898)
chr7 (15-99)||(33682629-33682715)
chr7 (18-99)||(21135464-21135545)
chr7 (15-91)||(3776042-3776118)
chr7 (15-99)||(35888523-35888607)
chr7 (15-101)||(23801921-23802007)
chr7 (15-89)||(43934802-43934876)
chr7 (17-99)||(44510084-44510166)
chr7 (15-99)||(3881278-3881362)
chr7 (15-99)||(45722220-45722307)
chr7 (17-96)||(32699449-32699528)
chr7 (15-88)||(24504897-24504970)
chr7 (15-99)||(32964135-32964219)
chr7 (15-56)||(37915355-37915396)
chr7 (15-55)||(6910599-6910639)
chr7 (192-256)||(7602825-7602890)
chr7 (24-101)||(12930541-12930618)
chr7 (15-92)||(31802869-31802946)
chr7 (50-99)||(37916027-37916076)
chr7 (20-101)||(40120992-40121073)
chr7 (20-100)||(6387544-6387624)
chr7 (15-99)||(17491729-17491813)
chr7 (15-99)||(17561401-17561485)
[»] chr6 (28 HSPs)
chr6 (15-99)||(13321068-13321152)
chr6 (15-109)||(17992202-17992297)
chr6 (15-99)||(8217461-8217545)
chr6 (17-99)||(4175457-4175539)
chr6 (17-99)||(6418392-6418474)
chr6 (15-99)||(9038853-9038937)
chr6 (15-99)||(22998785-22998869)
chr6 (15-99)||(23789535-23789619)
chr6 (15-99)||(2364409-2364493)
chr6 (15-99)||(28980595-28980679)
chr6 (15-95)||(28235947-28236027)
chr6 (20-99)||(8637053-8637132)
chr6 (15-93)||(29293567-29293645)
chr6 (15-95)||(27310645-27310725)
chr6 (21-84)||(22710490-22710553)
chr6 (15-101)||(8345443-8345528)
chr6 (18-99)||(4823185-4823266)
chr6 (22-80)||(11162073-11162131)
chr6 (15-89)||(27581599-27581672)
chr6 (15-99)||(33012405-33012489)
chr6 (22-93)||(14630121-14630192)
chr6 (15-101)||(32615200-32615286)
chr6 (20-101)||(25024243-25024324)
chr6 (15-63)||(11200807-11200855)
chr6 (24-99)||(15498850-15498925)
chr6 (24-101)||(20373256-20373333)
chr6 (43-99)||(1779784-1779840)
chr6 (43-111)||(9388517-9388585)
[»] chr5 (32 HSPs)
chr5 (15-99)||(23259878-23259962)
chr5 (15-99)||(8950028-8950112)
chr5 (15-99)||(41686855-41686939)
chr5 (15-106)||(31657897-31657988)
chr5 (15-101)||(13236152-13236238)
chr5 (13-99)||(11432527-11432613)
chr5 (15-89)||(25837221-25837295)
chr5 (15-99)||(7001515-7001599)
chr5 (15-99)||(15559750-15559834)
chr5 (23-99)||(1303317-1303393)
chr5 (15-99)||(16284930-16285014)
chr5 (21-97)||(31642406-31642482)
chr5 (15-99)||(35784660-35784744)
chr5 (15-99)||(21069850-21069934)
chr5 (15-99)||(24857768-24857852)
chr5 (17-99)||(39971229-39971311)
chr5 (15-100)||(27834157-27834242)
chr5 (15-99)||(39692394-39692478)
chr5 (20-95)||(16636748-16636823)
chr5 (15-97)||(8356281-8356363)
chr5 (15-99)||(6328543-6328627)
chr5 (18-96)||(5283263-5283341)
chr5 (15-89)||(28414435-28414508)
chr5 (15-72)||(16926665-16926722)
chr5 (15-99)||(18251233-18251317)
chr5 (15-99)||(41493499-41493583)
chr5 (42-99)||(40004149-40004206)
chr5 (15-71)||(41470858-41470914)
chr5 (20-70)||(8100162-8100212)
chr5 (41-106)||(22581468-22581533)
chr5 (15-99)||(15190554-15190638)
chr5 (20-99)||(42561090-42561167)
[»] chr4 (39 HSPs)
chr4 (15-99)||(21265432-21265516)
chr4 (15-99)||(6656485-6656569)
chr4 (15-99)||(29509018-29509102)
chr4 (15-99)||(37779955-37780039)
chr4 (15-99)||(47109560-47109644)
chr4 (15-105)||(17468101-17468191)
chr4 (17-99)||(18872932-18873014)
chr4 (17-99)||(23390088-23390170)
chr4 (15-101)||(53564094-53564180)
chr4 (15-95)||(7776688-7776768)
chr4 (15-99)||(24072222-24072306)
chr4 (15-99)||(32684808-32684892)
chr4 (15-99)||(39797602-39797686)
chr4 (15-93)||(20783399-20783477)
chr4 (18-99)||(28501127-28501208)
chr4 (19-92)||(50621486-50621559)
chr4 (15-99)||(3085655-3085739)
chr4 (15-99)||(13549192-13549276)
chr4 (15-99)||(19596181-19596265)
chr4 (15-99)||(38613591-38613675)
chr4 (15-106)||(13498219-13498310)
chr4 (15-99)||(30868539-30868622)
chr4 (15-99)||(35909855-35909939)
chr4 (15-74)||(41333815-41333874)
chr4 (15-96)||(2507598-2507679)
chr4 (15-99)||(6629216-6629300)
chr4 (31-99)||(52180292-52180360)
chr4 (22-96)||(26889644-26889718)
chr4 (15-99)||(30010593-30010676)
chr4 (20-107)||(5375289-5375376)
chr4 (37-99)||(53910368-53910430)
chr4 (24-101)||(47683311-47683388)
chr4 (45-99)||(47228467-47228521)
chr4 (15-96)||(50138403-50138482)
chr4 (20-101)||(2615681-2615762)
chr4 (20-100)||(9327978-9328058)
chr4 (189-237)||(32814583-32814631)
chr4 (45-101)||(39670969-39671025)
chr4 (42-94)||(53630032-53630084)
[»] chr3 (46 HSPs)
chr3 (15-99)||(12918578-12918662)
chr3 (15-99)||(29719451-29719535)
chr3 (15-99)||(32968966-32969050)
chr3 (15-99)||(44561436-44561520)
chr3 (15-99)||(45404587-45404671)
chr3 (15-99)||(47008242-47008326)
chr3 (15-99)||(48902449-48902533)
chr3 (18-99)||(30820116-30820197)
chr3 (15-99)||(31541235-31541319)
chr3 (15-99)||(34811526-34811610)
chr3 (18-99)||(1111388-1111469)
chr3 (15-99)||(28810861-28810945)
chr3 (15-99)||(36584918-36585002)
chr3 (15-99)||(42526365-42526449)
chr3 (15-99)||(48904003-48904087)
chr3 (16-101)||(4564451-4564536)
chr3 (15-92)||(28874999-28875076)
chr3 (15-92)||(48654992-48655069)
chr3 (18-99)||(54927830-54927911)
chr3 (15-99)||(8379890-8379974)
chr3 (15-99)||(34021735-34021819)
chr3 (19-99)||(40214820-40214900)
chr3 (15-99)||(42043994-42044078)
chr3 (18-99)||(27646046-27646127)
chr3 (22-99)||(42755561-42755638)
chr3 (15-99)||(17589616-17589700)
chr3 (15-99)||(24813797-24813881)
chr3 (15-99)||(38341161-38341245)
chr3 (15-103)||(52693436-52693524)
chr3 (15-96)||(21497554-21497635)
chr3 (26-99)||(22494395-22494469)
chr3 (15-93)||(4836437-4836517)
chr3 (15-83)||(29447551-29447619)
chr3 (16-99)||(2801215-2801298)
chr3 (190-280)||(35052537-35052628)
chr3 (15-96)||(33290557-33290638)
chr3 (20-99)||(29383233-29383312)
chr3 (15-74)||(34265489-34265548)
chr3 (41-101)||(10045079-10045139)
chr3 (20-51)||(41392667-41392698)
chr3 (55-101)||(26058792-26058838)
chr3 (41-99)||(41824347-41824405)
chr3 (42-99)||(14428849-14428906)
chr3 (192-245)||(49596630-49596683)
chr3 (45-101)||(7181594-7181650)
chr3 (41-101)||(36005743-36005803)
[»] chr2 (25 HSPs)
chr2 (15-99)||(30858151-30858235)
chr2 (17-99)||(36750624-36750706)
chr2 (15-99)||(6028555-6028639)
chr2 (15-99)||(18970469-18970553)
chr2 (19-99)||(31633587-31633667)
chr2 (15-99)||(34431941-34432025)
chr2 (15-101)||(9701283-9701369)
chr2 (15-99)||(13214968-13215052)
chr2 (21-99)||(41422731-41422809)
chr2 (15-99)||(11944378-11944462)
chr2 (15-99)||(21838829-21838913)
chr2 (15-99)||(28566364-28566448)
chr2 (15-99)||(40544539-40544623)
chr2 (15-99)||(41494362-41494446)
chr2 (15-79)||(27725450-27725514)
chr2 (19-99)||(43700838-43700918)
chr2 (15-93)||(2788084-2788162)
chr2 (15-90)||(4408528-4408601)
chr2 (15-64)||(30830118-30830167)
chr2 (19-99)||(12873871-12873951)
chr2 (41-99)||(1422163-1422221)
chr2 (41-99)||(15571425-15571483)
chr2 (45-99)||(44436224-44436278)
chr2 (24-101)||(19034633-19034710)
chr2 (45-101)||(2060560-2060616)
[»] scaffold0009 (1 HSPs)
scaffold0009 (15-99)||(246668-246752)
[»] scaffold0038 (1 HSPs)
scaffold0038 (15-95)||(36109-36189)
[»] scaffold0039 (1 HSPs)
scaffold0039 (15-98)||(103804-103887)
[»] scaffold0486 (1 HSPs)
scaffold0486 (15-70)||(531-586)
[»] scaffold0339 (1 HSPs)
scaffold0339 (45-99)||(6879-6933)
[»] scaffold0368 (1 HSPs)
scaffold0368 (20-101)||(8436-8517)
[»] scaffold0012 (1 HSPs)
scaffold0012 (20-101)||(47858-47939)
[»] scaffold1283 (1 HSPs)
scaffold1283 (42-94)||(3-55)


Alignment Details
Target: chr1 (Bit Score: 174; Significance: 1e-93; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 280
Target Start/End: Original strand, 27479811 - 27480092
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagtgtttatttgggag 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  27479811 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttgacaaaagactcctatatttagggacggaggtagtaatgtttatttgggag 27479910  T
Q  115 actactaaagcaaagacaatattgcacaattaaaatttagacaactctacaatttgta---------------attacattgatttgagggttttgtcta 199  Q
    |||||||||||||| |||||| ||||| |||| |||||||||||||||||||||||||               |||||||||||||||||||||||||||    
T  27479911 actactaaagcaaa-acaatactgcacgattagaatttagacaactctacaatttgtaattacttttatatttattacattgatttgagggttttgtcta 27480009  T
Q  200 acatgcataagcaaaattgtcttgcatcatgcacaa--atgtcatttcactatttgatcgaaatgtcatatcatatttaattt 280  Q
    ||||||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||| |||||||||||||| ||||    
T  27480010 acatgcataagcaaaattgtcttgcatcatgcacaaatatatcatttcactatttaatcgaaaagtcatatcatattttattt 27480092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 17483945 - 17484029
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17483945 tatatacaaatttaatactacaaccaattttcttaatctccgcaattttggcaaaaggctcctatatttagggacggaggtagta 17484029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 37850261 - 37850177
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37850261 tatacacaaatttaatactacaaccaactttcttaatctccgtaatttttgcaaaaggctcctatatttagggacggaggtagta 37850177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 27670054 - 27670127
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttaggga 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  27670054 tatatacaaatttaatactacaatcaactttcttaatctccgtaatttttgcaaaaagctcctatatttaggga 27670127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 30996957 - 30997040
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  30996957 tatatacaaatttaatattacaatcaactttcttagtctccgtaattttggcaaaagactcctatatttagggac-gaggtagta 30997040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 38920447 - 38920531
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  38920447 tatataaaaatttaatactacaaccaactttcttaatctccgcaattttagcaaaaggctcctatatttagggacggagggagta 38920531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 52429100 - 52429184
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |||| |||||||||||||||||||||||    
T  52429100 tatatacaaatttaatactacaaccaactttattaatctccgcaattttggcaaaaagctcttatatttagggacggaggtagta 52429184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 29437676 - 29437594
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| ||||||||||||||||  || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29437676 tataaaaatttaatactacaacaaattttcttaatctccgtaattttagcaaaaggctcctatatttagggacggaggtagta 29437594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 2637010 - 2636926
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtag 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||    
T  2637010 tatatacaaatttaatactacaaccaactttcttaatctccgtaatttt-tcaaaaggctactatatttagggacagaggtagtag 2636926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 4279952 - 4279868
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||||||||||||| ||||||||||||||||| |||||||||    
T  4279952 tatatataaatttaatactacaaccaactttcttaatctctgcaattttggcaaaagactcctatatttagggacagaggtagta 4279868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 45810203 - 45810287
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| || |||||    
T  45810203 tatatataaatttaatactacaatcaactttcttaatctcggtaatttttgcaaaaggctcctataattagggacgaagatagta 45810287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 46271176 - 46271092
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||| || ||| ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  46271176 tatatacaaatttaatactataaccaaatttcttaatctacgcaattttggcaaaaggctcctatacttagggacggaggtagta 46271092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 49549214 - 49549298
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||    
T  49549214 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttgacaaaagactcctatatttagggagggaagtagta 49549298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 51467297 - 51467213
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  51467297 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttagcaaaaggctaagatatttagggacggaggtagta 51467213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 48363838 - 48363745
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaagg--ctcctatatttagggacggaggtagtagtgttta 106  Q
    ||||||||||||||||||||| | |||||||||||||||||| || ||||||||||||  |||||||||||||||| |||||||||||| ||||    
T  48363838 tatatacaaatttaatactactaccaactttcttaatctccgcaaatttggcaaaaggctctcctatatttagggatggaggtagtagttttta 48363745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 15302568 - 15302485
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||    
T  15302568 tatatacaaatttaatactacaaccaattttcttaatctccgcaattttggcaaaagtctcctatattta-ggacggatgtagta 15302485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 23893521 - 23893437
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||| |||||    
T  23893521 tatatacaaatttaatattacaaccaactttcttaatctctgtaattttgacaaaagactcctatatttagggacagagatagta 23893437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 39627060 - 39626985
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacg 90  Q
    |||||| |||||||||||||||| | ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  39627060 tatatataaatttaatactacaacctactttcttaatctccgtaatttttgcaaaaggttcctatatttagggacg 39626985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 15911271 - 15911343
Alignment:
Q  27 taatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||| |||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  15911271 taataccacaaccaactttcttaatctccgcaatttttgcaaaaggctcctatatttagggacggaagtagta 15911343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 38509125 - 38509209
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| || ||||  ||||| ||| |||||| ||||||||||||||||    
T  38509125 tatatacaaatttaatactacaaccaactttcttaatctccgcaaatttgataaaagactcatatattaagggacggaggtagta 38509209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 39425654 - 39425570
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||||| | |||||||||||  |||||||||||||    
T  39425654 tatatacaaatttaatactacaaccaactttcttaatctgcgttatttttgcaaaaagatcctatatttaatgacggaggtagta 39425570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 21290334 - 21290417
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagt 98  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| |||||| ||||||||||| ||||||||| || |||||||||    
T  21290334 tatatacaaatttaatattacaaccaattttcttaatctccgcaatttttgcaaaaggctcatatatttagtgatggaggtagt 21290417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 41619989 - 41619913
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacgg 91  Q
    ||||||||||||||||||||||| ||||||| |||||||| | |||||| ||| || ||||||||||||||||||||    
T  41619989 tatatacaaatttaatactacaaacaacttttttaatctcagcaatttttgcataaagctcctatatttagggacgg 41619913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 35945424 - 35945487
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatat 81  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| |||||||| || |||||    
T  35945424 atacaaatttaatactacaaccaactttcttaatctccgaaatttttgcaaaaggttcatatat 35945487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 5854130 - 5854045
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtag 100  Q
    |||| |||||||||||  || |||||||||||||||| ||||| |||||||||||||  |  |||| |||||||||||||||||||    
T  5854130 tataaacaaatttaatgttataatcaactttcttaatttccgtgattttggcaaaagagtgatataattagggacggaggtagtag 5854045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 4389822 - 4389870
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaatttt 63  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  4389822 tatatacaaatttaatactacaaccaactttcttaatctccgcaatttt 4389870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 19349695 - 19349783
Alignment:
Q  15 tatatacaaatttaatactacaatcaac----tttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||| |||| ||||    |||| |||||||| ||||||| |||||| ||||||||||||| ||||| ||||||||    
T  19349695 tatatacaaatttaatacaacaaccaaccaactttcctaatctccctaatttttgcaaaatgctcctatatttaaggacgaaggtagta 19349783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 7763545 - 7763482
Alignment:
Q  45 tcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagtgtttatt 108  Q
    ||||||| ||||| |||||  |||||||  |||||| |||||||||||||||||||||||||||    
T  7763545 tcttaatttccgttattttttcaaaagggccctataattagggacggaggtagtagtgtttatt 7763482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 22567308 - 22567366
Alignment:
Q  41 actttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||| |||||||||||  ||||||| || ||||| |||||||||||||||||    
T  22567308 actttcttaatttccgtaattttaacaaaagggtcttatatatagggacggaggtagta 22567366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 43789872 - 43789949
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggag 93  Q
    ||||||||||||||| ||||  | |||||| ||||||  |||| |||||||| ||||| ||||||||||||||||||||    
T  43789872 tatatacaaatttaacactagtaccaacttacttaattcccgtgattttggc-aaagggtcctatatttagggacggag 43789949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 4371590 - 4371510
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggta 96  Q
    ||||||||||||||||| ||||| ||||||||||||| ||   ||||||   |||| ||||||||||||| |||||||||||    
T  4371590 tatatacaaatttaatattacaaccaactttcttaatttctacaatttttataaaaagctcctatattta-ggacggaggta 4371510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 35693283 - 35693362
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||| ||| |  ||||| |||||||||  |||| |||||  ||||||| ||||||| ||||||||||||||||||    
T  35693283 acaaatttattaccattatcaaatttcttaattcccgttattttttcaaaagggtcctataattagggacggaggtagta 35693362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 37951768 - 37951689
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| |||||||| |  ||| |||||||||||  |||||||||| |||||||| || |||| ||||||||||||| ||||    
T  37951768 acaactttaatacaaatatccactttcttaattcccgtaattttagcaaaagggtcatataattagggacggagggagta 37951689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 50008301 - 50008222
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| |||||||| |  ||| ||| |||||||  ||||||||||||||||||| || ||||| |||||||||||| ||||    
T  50008301 acaactttaatacaaatatccactatcttaattcccgtaattttggcaaaagggtcttatatatagggacggagggagta 50008222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 22940634 - 22940561
Alignment:
Q  26 ttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||| |||||||||||||||  | || ||||   ||||||| ||||||| |||| |||||||||||||    
T  22940634 ttaatactactatcaactttcttaattcctgtgatttgatcaaaagggtcctataattagagacggaggtagta 22940561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 42872152 - 42872071
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||| |||||||| |  ||| ||| |||||||  |||| |||||||||||||| || ||||| |||||||||||| ||||||    
T  42872152 acaactttaatacaaatatccactatcttaattcccgtgattttggcaaaagggtcttatatatagggacggagggagtagt 42872071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 47754578 - 47754623
Alignment:
Q  54 ccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| |||||||||||||| || ||||| |||||||||||||||||    
T  47754578 ccgtgattttggcaaaaggatcttatatatagggacggaggtagta 47754623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 14171743 - 14171827
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| ||| ||||||||| |  ||| ||| |||||||  ||||||||||  ||||||| ||||||| ||||||||||||| ||||    
T  14171743 tataaacatatttaatacaaatatccactatcttaattcccgtaattttttcaaaagggtcctataattagggacggagggagta 14171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 37000880 - 37000960
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtag 100  Q
    |||||||||||||||  ||||||||| |||||  | || |||| | ||| ||  |||||||||||| ||||||||||||||    
T  37000880 acaaatttaatactagtatcaactttgttaattccagtgatttggccaatagagtcctatatttagcgacggaggtagtag 37000960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 6e-34; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 36786680 - 36786761
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggta 96  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36786680 tatatacaaatttaatactacaaccaactttcataatctccgtaattttggcaaaaggctcctatatttagggacggaggta 36786761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 36941481 - 36941565
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  36941481 tatatacaaatttaatactacaatcaactttcttaatctccgcaattttgacaaaagactcctatatttagggacggaggtagta 36941565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 43292822 - 43292738
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43292822 tatatacaaatttaatattacaaccaactatcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 43292738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 11293866 - 11293956
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagtgttt 105  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||    
T  11293866 tatatacaaatttaatactacaaccaactttcttaatctccgtaatttttgcaaaagactcctatatttagagacggaggtagtattgttt 11293956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 29073833 - 29073917
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  29073833 tatatacaaatttaatactacaaccaattttcttaatctccgtaatttttgcaaaaggctcatatatttagggacggaggtagta 29073917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 35179813 - 35179891
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggag 93  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  35179813 tatatacaaatttaatactacaaccaactttcttaatctcagtaattttggcaaaaggctcctatatttaggcacggag 35179891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 5244450 - 5244366
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||    
T  5244450 tatatacaaatttaatactacaaccaactttcttaatctccgtaatttttgtaaaagactcctatatttagggacggaagtagta 5244366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 23425022 - 23425106
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  23425022 tatatacaaatttaatacaacaaccaactttcttaatctccgtaattttgacaaaatgctcctatatttagggacagaggtagta 23425106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 23995789 - 23995873
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||    
T  23995789 tatatacaaatttaatactacaaccaactttcttaatctccacaattttggtaaaaggctcttatatttagggacggaggtagta 23995873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 44165293 - 44165209
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||| || |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  44165293 tatatacaaatttaatactataaccaactttcttaatctccacaatttttgcaaaaggctcctatatttagggacggaggtagta 44165209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 23497946 - 23498033
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagtgttt 105  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||||    
T  23497946 atacaaatttaatactacaaccaactttctcaatctccgtaatttttgcaaaaggctcctataattagggacgaaggtagtattgttt 23498033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 12802824 - 12802904
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  12802824 atacaaatttaatactacaaccaacttttttaatctccataattttgg-aaaaggctcctatatttagggacggaggtagta 12802904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 5110094 - 5110178
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||  |||||||||||||||| ||||||||||    
T  5110094 tatatacaaatttaatactacaattaacttttttaatctccgtaattttggtaaaaaactcctatatttagggatggaggtagta 5110178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 26626006 - 26626091
Alignment:
Q  17 tatacaaatttaatactacaatcaactttctt-aatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||||||||||| ||||| |||||||||| |||||||| |||||| ||||||| |||||||||||||||||||||||||||||    
T  26626006 tatacaaatttaatattacaaccaactttctttaatctccgcaatttttgcaaaagactcctatatttagggacggaggtagtagt 26626091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 17336633 - 17336714
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| |||||| | ||||||| ||||||||||| ||||||    
T  17336633 atacaaatttaatactacaaccaattttcttaatctccgtaatttttgcaaaatgttcctataattagggacggacgtagta 17336714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 19176906 - 19176987
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||| |||||||||||||||| |||||||| ||||||| || ||||| ||| ||||||||||||||    
T  19176906 atacaaatttaatactacaaccaactttcttaatctctgtaatttttgcaaaagacttctataattaaggacggaggtagta 19176987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 23894732 - 23894651
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggta 96  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||  |||||   |||||||||||||||||||||||    
T  23894732 tatatacaaatttaacactacaaccaactttcttaatctccgtaattttaacaaaaaattcctatatttagggacggaggta 23894651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 26502693 - 26502777
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||||| ||||||||||||| | |||||||||  |||||| |||||||||||| ||||||||||||||    
T  26502693 tatatacaaatttaataatacaaccaactttcttaatatgcgtaatttttacaaaagactcctatatttaaggacggaggtagta 26502777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 41898314 - 41898234
Alignment:
Q  19 tacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||   ||||||||||||||||||| ||||||| |||||    
T  41898314 tacaaatttaatactacaaccaactttcttaatctccacaattttaataaaaggctcctatatttagagacggagatagta 41898234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 36409811 - 36409859
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttgg 65  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36409811 tatacaaatttaatactacaaccaactttcttaatctccgtaattttgg 36409859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 13143559 - 13143643
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||| |||||||||||||||| ||| |||| ||| |||||||||||| ||||||||||| |||| |||| ||| || ||||||    
T  13143559 tatatataaatttaatactacaaccaagtttcctaaactccgtaatttttgcaaaaggctcatataattagagacagatgtagta 13143643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 5449645 - 5449729
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||| |||||||||||||||| ||||||| ||||| | | |||||||  |||||   |||||||||||| |||||||||||||    
T  5449645 tatatataaatttaatactacaaccaacttttttaatttgcataatttttacaaaaaattcctatatttagagacggaggtagta 5449729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 45145745 - 45145816
Alignment:
Q  19 tacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacg 90  Q
    ||||||||||||| ||  | |||||||||||||   ||||||||||||||||||||| |||| |||||||||    
T  45145745 tacaaatttaatattattaccaactttcttaattctcgtaattttggcaaaaggctcttataattagggacg 45145816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 34856549 - 34856501
Alignment:
Q  192 tttgtctaacatgcataagcaaaattgtcttgcatcatgcacaaatgtc 240  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| ||||    
T  34856549 tttgtctaacatgcacaagcaaaatagtcttgcaccatgcacaagtgtc 34856501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 6863200 - 6863157
Alignment:
Q  192 tttgtctaacatgcataagcaaaattgtcttgcatcatgcacaa 235  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||    
T  6863200 tttgtctaacatgcacaagcaaaatggtcttgcaccatgcacaa 6863157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 28191993 - 28191914
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| |||||||| |  ||| ||| |||||||  ||||||||||||||||||| || ||||| |||||||||||| ||||    
T  28191993 acaactttaatacaaatatccactatcttaattcccgtaattttggcaaaagggtcttatatatagggacggagggagta 28191914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 41957468 - 41957515
Alignment:
Q  193 ttgtctaacatgcataagcaaaattgtcttgcatcatgcacaaatgtc 240  Q
    |||||||||||||| ||| ||||| |||||||| ||||||||||||||    
T  41957468 ttgtctaacatgcacaagtaaaatggtcttgcaccatgcacaaatgtc 41957515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 24724064 - 24724098
Alignment:
Q  65 gcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||| |||||||||||||||||||||||    
T  24724064 gcaaaaggctcttatatttagggacggaggtagta 24724098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 45425268 - 45425330
Alignment:
Q  37 atcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||| |||| ||||||  ||||| | || ||||| |||||||||||||||||    
T  45425268 atcaactttcttaatttccgcaattttaacaaaatggtcttatatatagggacggaggtagta 45425330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 23687989 - 23687905
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| ||| ||||||||| |  ||| ||| |||||||  |||| |||||  ||||||| ||||||| ||||||||||||||||||    
T  23687989 tataaacatatttaatacaaatatccactatcttaattcccgttattttttcaaaagggtcctataattagggacggaggtagta 23687905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 11486 - 11402
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  11486 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttgacaaaatgctcctatatttagagacggaggtagta 11402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 17677 - 17761
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  17677 tatatacaaatttaatactacaatcaactttcttaatctccgcaattttggcaaaatgctcctatatttaaggacggaggtagta 17761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 54 - 138
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  54 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttggcaaaaggctcctatatttaaggacggaggtagta 138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 19293336 - 19293420
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19293336 tatatacaaatttaatattacaaccaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggatgtagta 19293420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 19845491 - 19845407
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19845491 tatatacaaatttaatactacaactaactttcttaatctccgtaattttggcaaaagactcctatatttagggacggaggtagta 19845407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 27813713 - 27813797
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  27813713 tatatacaaatttaatactacaatccactttcttaatctccgcaatttttgcaaaaggctcctatatttagggacggaggtagta 27813797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 49044942 - 49044858
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49044942 tatacaaatttaatactacaacccactttcttaatctccgcaattttggcaaaaggctcctatatttagggacggaggtagtagt 49044858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 2345367 - 2345283
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  2345367 tatatacaaatttaatactacaaccaactttcttaatctccgtaattttggcaaaaagctcctatatttagaaacggaggtagta 2345283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 30534916 - 30535000
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||    
T  30534916 tatatacaaatttaatactacaaccaactttcttaatctctgcaattttggaaaaaggctcctatatttagggacggaggtagta 30535000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 42887904 - 42887820
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  42887904 tatatacaaatttaatactacaaccaactttcttaatctctgtaattttgacaaaatgctcctatatttagggacggaggtagta 42887820  T

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Target: chr7; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 40299176 - 40299090
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||||||||||||||||||| ||||||| ||||||||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  40299176 tatatacaaatttaatactacaaccaacttttttaatctccataattttgacaaaagactcctatatttagggacggaggtagtagt 40299090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 32643628 - 32643544
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  32643628 tatatataaatttaatactacaaccaactttcttaatctccgtaatttttgcaaaagactcctatatttagggactgaggtagta 32643544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 47649002 - 47648918
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  47649002 tatatacaaatttaatactacaaccaactttctcaatctccgcaattttggcaaaaagctcctatatttatggacggaggtagta 47648918  T

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Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 34693616 - 34693698
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||  || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  34693616 tatacaaatttaatactacaacaaattttcttaatctccgtaattttagcaaaaggcttctatatttagggacggaggtagta 34693698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 8782034 - 8781952
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||  |||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  8782034 tatatacaaat--aatactacaaccaactttcttaatctccgcaattttggcaaaaggctcatatatttagggacggaggtagta 8781952  T

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Target: chr7; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 33682924 - 33683005
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggta 96  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||    
T  33682924 tatatacaaatttaaaactacaaccaactttcttaatctccgcaattttgacaaaaggctcctatatttaggtacggaggta 33683005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 9682814 - 9682898
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||| |||  ||||||||||||| |||| |||||||||||||||||||||||    
T  9682814 tatatacaaatttaatactacaaccaactttcttaatgtccacaattttggcaaaatgctcttatatttagggacggaggtagta 9682898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 33682715 - 33682629
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaa--aggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||  | |||||||||||||||||| |||||||||    
T  33682715 tatatacaaatttaatactacaaccaactttcttaatctccgtaatttttgcaaaatatgctcctatatttagggacagaggtagta 33682629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 21135464 - 21135545
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  21135464 atacaaatttaatactacaatcaacttgcttattctccgtaatttttgcaaaaggctcttataattacggacggaggtagta 21135545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 3776042 - 3776118
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacgg 91  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| || ||||||||||| ||||    
T  3776042 tatatacaaatttaatactacaatcaacttttttaatctccgtaatttttgcaaaagacttctatatttaggaacgg 3776118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 35888523 - 35888607
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||  |||||| ||| |||||||||||||||||||||||    
T  35888523 tatatacaaatttaatactacaacaaactttcttaatctccgcaattttaacaaaagactcttatatttagggacggaggtagta 35888607  T

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Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 23802007 - 23801921
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||||| ||||||||||| || ||||| ||||    
T  23802007 tatatacaaatttaatactacaaccaactttgttaatccccgcaattttggcaaaaggctcatatatttagggtcgaaggtaatagt 23801921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 43934802 - 43934876
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggac 89  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  43934802 tatataaaaatttaatactacaaccaactttcttaatctccgcaattttcacaaaaggctcctatatttagggac 43934876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 44510166 - 44510084
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||| ||||||||||||||| | |||||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||||    
T  44510166 tataccaatttaatactacaacccactttcttaatctccgcaattttggcaaaagtctcatatatttagggacggagggagta 44510084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 3881362 - 3881278
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||  |||||| || ||||||||||||||| || |||||    
T  3881362 tatatacaaatttaatactacaactaactttcttaatctccgtaatttttacaaaagacttctatatttagggacgaagatagta 3881278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 45722220 - 45722307
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctcc--gtaattttggc-aaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||  ||||||||||| ||||  |||||||||||| ||||||||||||||    
T  45722220 tatatacaaatttaatactacaaccaactttcttaatctccgtgtaattttggcaaaaaaactcctatatttaaggacggaggtagta 45722307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 32699528 - 32699449
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggta 96  Q
    |||||||||||||||||||||   | |||||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  32699528 tatacaaatttaatactacaacatattttcttaatctctgtaattttagcaaaagactcctatatttagggacggaggta 32699449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 24504897 - 24504970
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttaggga 88  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||   | |||||||||||||    
T  24504897 tatatacaaatttaatactacaaccaactttcttaatctccgtaatttttgcaaaaaatttctatatttaggga 24504970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 32964219 - 32964135
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||| |||||| ||||| ||||||| ||||||||||||||||| ||||||  ||| |||||||| ||||||||||||||    
T  32964219 tatatacaaaattaataatacaaccaacttttttaatctccgtaatttttgcaaaaaactcatatatttatggacggaggtagta 32964135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 37915355 - 37915396
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccg 56  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  37915355 tatatataaatttaatactacaaccaactttcttaatctccg 37915396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 6910639 - 6910599
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctcc 55  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  6910639 tatatacaaatttaatactacaaccaactttctgaatctcc 6910599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 7602825 - 7602890
Alignment:
Q  192 tttgtctaacatgcataagcaaaattgtcttgcatcatgcacaaatgtc-atttcactatttgatc 256  Q
    ||||||||||||||| ||| ||||| || ||||| ||||||||||||||  |||||||||| ||||    
T  7602825 tttgtctaacatgcacaagtaaaatggttttgcaccatgcacaaatgtctttttcactattggatc 7602890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 12930541 - 12930618
Alignment:
Q  24 atttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||||| |  ||| ||| |||||||  |||| |||||  ||||||| ||||||| ||||||||||||||||||||    
T  12930541 atttaatacaaatatccactatcttaattcccgttattttttcaaaaggatcctataattagggacggaggtagtagt 12930618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 31802946 - 31802869
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacgga 92  Q
    |||| |||||||||||||||  || |||||| ||||| | ||| |||||||||||| | |||||||  ||||||||||    
T  31802946 tataaacaaatttaatactattattaacttttttaattttcgtgattttggcaaaaagatcctataactagggacgga 31802869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 37916027 - 37916076
Alignment:
Q  50 atctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||| ||||||| |||||  ||||||||||||||||| |||||||||    
T  37916027 atctccgcaattttgacaaaaaactcctatatttagggacagaggtagta 37916076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 40121073 - 40120992
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||||| ||| || ||||| |||||||||  |||| |||||  |||||||  |||||| |||| |||||||||||||||    
T  40121073 acaaatttattaccactatcaattttcttaattcccgttatttttccaaaagggccctataattagagacggaggtagtagt 40120992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 6387544 - 6387624
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtag 100  Q
    |||| |||||||| |  ||| ||| |||||||  |||| |||||||||||||| || ||||| |||||||||||| |||||    
T  6387544 acaactttaatacaaatatctactatcttaattcccgtgattttggcaaaagggtcttatatatagggacggagggagtag 6387624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 17491729 - 17491813
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| |||| |||||||| |  ||| ||| |||||||  |||| |||||||||||||| || ||||| |||||||||||| ||||    
T  17491729 tataaacaactttaatacaaatatccactatcttaattcccgtgattttggcaaaagggtcttatatatagggacggagggagta 17491813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 17561485 - 17561401
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| |||| |||||||| |  ||| ||| |||||||  |||| |||||||||||||| || ||||| |||||||||||| ||||    
T  17561485 tataaacaactttaatacaaatatccactatcttaattcccgtgattttggcaaaagggtcttatatatagggacggagggagta 17561401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 13321152 - 13321068
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13321152 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttggcaaaaggctcctatatttagggacggcggtagta 13321068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 17992202 - 17992297
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta-gtgtttattt 109  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  17992202 tatatacaaatttaatactacaatcaactttcttaatctccgcaattttagcaaaaggctcatatatttagtgacggaggtagtatgtgtttattt 17992297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 8217545 - 8217461
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||    
T  8217545 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttggcaaaaggttcatatatttagggacggaggtagta 8217461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 4175457 - 4175539
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  4175457 tatacaaatttaatattacaaccaactttcttaatctccgtgattttagcaaaaggctcctatatttagggacggaggtagta 4175539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 6418474 - 6418392
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  6418474 tatacaaatttaatattacaaccaactttcttaatctccgtgattttagcaaaaggctcctatatttagggacggaggtagta 6418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 9038853 - 9038937
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  9038853 tatatagaaatttaatactacaaccaactttcttaatctccgcaattttggcaaaagactcctatatttagggacggagggagta 9038937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 22998869 - 22998785
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| |||||||||||| ||||||||||    
T  22998869 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttgacaaaaggctcttatatttagggagggaggtagta 22998785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 23789535 - 23789619
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| |||||||||||| ||||||||||    
T  23789535 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttgacaaaaggctcttatatttagggagggaggtagta 23789619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 2364493 - 2364409
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||| |||||| |||||||||||||||| | |||||| ||||||| |||||||||||||||||||||||||||    
T  2364493 tatatacaaatttaatgctacaaccaactttcttaatctctgcaatttttgcaaaagactcctatatttagggacggaggtagta 2364409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 28980679 - 28980595
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||||    
T  28980679 tatatacaaatttaatactacaactaactttcttaatctccgcaattttggcaaaaagctcttatatttagggatggaggtagta 28980595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 28236027 - 28235947
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggt 95  Q
    |||||||||||||||||| |||| ||||||||| |||||||  ||||||||||||||||||||||||||||||||| ||||    
T  28236027 tatatacaaatttaataccacaaccaactttctcaatctccacaattttggcaaaaggctcctatatttagggacgaaggt 28235947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 8637132 - 8637053
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||||| |||||||||||| | ||||| ||||||    
T  8637132 acaaatttaatactacaactaactttcttaatctccgtaattttgacaaaagactcctatatttaagaacggaagtagta 8637053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 29293645 - 29293567
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggag 93  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||  ||  |||||||||||||||||    
T  29293645 tatatacaaatttaatactacaaccaactttcttaatctccgtcatttttgcaaaaaacttttatatttagggacggag 29293567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 27310645 - 27310725
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggt 95  Q
    |||||||||||||||||||||||  |||||||||||||||  |||||||   ||||||||||||||||||||||| |||||    
T  27310645 tatatacaaatttaatactacaacaaactttcttaatctctataatttttataaaaggctcctatatttagggactgaggt 27310725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 22710490 - 22710553
Alignment:
Q  21 caaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatattta 84  Q
    ||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||||||||||    
T  22710490 caaatttaatactacaaccaactttcttaatctccgcaattttgacaaaagactcctatattta 22710553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 8345443 - 8345528
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||| |||||  ||||| |||| |||||||||| |||||||    
T  8345443 tatatacaaatttaatactacaaccaacttttttaatctctgtaattttgacaaaatactcct-tattcagggacggagatagtagt 8345528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 4823185 - 4823266
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||| | ||| ||||||||||||||| | ||||||| |||||| ||||||||| |||| |||||||||||||    
T  4823185 atacaaatttaatattgcaaccaactttcttaatcttcttaatttttgcaaaaagctcctataattagagacggaggtagta 4823266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 11162073 - 11162131
Alignment:
Q  22 aaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctata 80  Q
    |||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||    
T  11162073 aaatttaatactacaaccaactttcttaatttccgtaatttttgcaaaaagctcctata 11162131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 27581599 - 27581672
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggac 89  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||   ||||| ||||||||| |||||||    
T  27581599 tatatacaaatttaatactacaaccaac-ttcttaatctccgtaatttttataaaagactcctatatatagggac 27581672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 33012489 - 33012405
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| |||||||||||| ||| | |||||||||||||  |  ||||||| ||||| | |||||||||||||||| ||||||||||    
T  33012489 tataaacaaatttaatattactaccaactttcttaattcctataattttagcaaatgactcctatatttagggatggaggtagta 33012405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 14630121 - 14630192
Alignment:
Q  22 aaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggag 93  Q
    |||||||||| ||||| | |||||||||||||||||||||||  | ||||| || ||||||||| |||||||    
T  14630121 aaatttaatattacaaccgactttcttaatctccgtaatttttacgaaaggttcatatatttagtgacggag 14630192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 32615200 - 32615286
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||| |||||||||||| ||  ||||| ||||||||| ||||| |||||| ||||||  || |||| |||| |||||||||||||||    
T  32615200 tataaacaaatttaatattattatcaattttcttaatttccgtgattttgacaaaagagtcatataattagagacggaggtagtagt 32615286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 25024324 - 25024243
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||| |||||||| |  ||| ||| |||||||  ||||||||||||||||||| || ||||| |||||||||||| ||||||    
T  25024324 acaactttaatacaaatatccactatcttaattcccgtaattttggcaaaagggtcttatatatagggacggagggagtagt 25024243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 11200807 - 11200855
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaatttt 63  Q
    |||||| |||||||||||||||  ||||||||||||| |||||||||||    
T  11200807 tatataaaaatttaatactacagccaactttcttaatttccgtaatttt 11200855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 15498850 - 15498925
Alignment:
Q  24 atttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||| |  ||| |||||||||||  |||| |||||  ||||||| ||||||| ||||||||||||||||||    
T  15498850 atttaatacaaatatccactttcttaattcccgttattttttcaaaagggtcctataattagggacggaggtagta 15498925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 20373256 - 20373333
Alignment:
Q  24 atttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||||| |  ||| ||| ||||||| ||||| |||||  |||||||  |||||| ||||||||||||||||||||    
T  20373256 atttaatacaaatatccactatcttaatttccgttattttttcaaaagggccctataattagggacggaggtagtagt 20373333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 1779840 - 1779784
Alignment:
Q  43 tttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||  |||||||||| |||||||| || |||| ||||||||||||| ||||    
T  1779840 tttcttaattcccgtaattttagcaaaaggatcttataattagggacggagggagta 1779784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 9388585 - 9388517
Alignment:
Q  43 tttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagtgtttatttgg 111  Q
    |||||||||  |||| ||||| |||||||| || |||| ||||||||||||| |||||| ||| |||||    
T  9388585 tttcttaattcccgtgattttagcaaaagggtcttataattagggacggagggagtagtatttttttgg 9388517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 23259962 - 23259878
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  23259962 tatatacaaatttaatactacaaccaactttcttaatctccgtaattttggcaaaagacttctatatttagggacggaggtagta 23259878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 8950028 - 8950112
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  8950028 tatatacaaatttaatactacaaccaactttcttaatctccgcaatttttgcaaaaggctcctatatttagggacggatgtagta 8950112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 41686939 - 41686855
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  41686939 tatatacaaatttaatactacaaccaattttcttaatctccgtaatttgggcaaaaggctcctatatttagggacagaggtagta 41686855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 31657897 - 31657988
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagtgttta 106  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||| ||||||    
T  31657897 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttgacaaaagactcatatatttagggacggaggtagtattgttta 31657988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 13236152 - 13236238
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||    
T  13236152 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttgacaaaagactcctgtatttagggacggaggtagtagt 13236238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 11432527 - 11432613
Alignment:
Q  13 aatatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| ||||||||||||||| || |||||||||    
T  11432527 aatatatacaaatttaatactgcaaccaactttcttaatctccgtaatttttgcaaaatgctcctatatttaggaacagaggtagta 11432613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 25837221 - 25837295
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggac 89  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  25837221 tatatacaaatttaatactacaaacaactttcttaatcttcgtaattttggtaaaaggctcctatatttagggac 25837295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 7001515 - 7001599
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| ||| |||||| ||||||||||||||||    
T  7001515 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttgacaaaagactcttatattcagggacggaggtagta 7001599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 15559750 - 15559834
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||| |||||||||||||| || |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  15559750 tatatgcaaatttaatactagaaccaactttcttaatctccgtaatttttacaaaaggctcttatatttagggacggaggtagta 15559834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 1303393 - 1303317
Alignment:
Q  23 aatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||  ||| |||||||||||||||||||||||    
T  1303393 aatttaatactacaaccaactttcttaatctccgtaattttgacaaaaaactcttatatttagggacggaggtagta 1303317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 16285014 - 16284930
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||| |||||||||||||||||| || |||||    
T  16285014 tatatacaaatttaatattacaaccaattttcttaatctccgtaattttgacaaaagactcctatatttagggacgaagatagta 16284930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 31642406 - 31642482
Alignment:
Q  21 caaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtag 97  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||||| ||||    
T  31642406 caaatttaatactacaaccaactttcttaatctccgcaatttttgcaaaaggctcgtatatttagggacggatgtag 31642482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 35784744 - 35784660
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||||| ||||||| |||||||||| ||||||| |||||| |||||||||||||||||| ||||||||    
T  35784744 tatatacaaatttaatattacaaccaacttttttaatctccgcaattttgacaaaagactcctatatttagggacgaaggtagta 35784660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 21069850 - 21069934
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||||| |||||||||||||||||| ||||||| |||||| ||| |||||||| | ||||||||||||    
T  21069850 tatatacaaatttaataatacaaccaactttcttaatctccgcaattttgacaaaagactcttatatttaagaacggaggtagta 21069934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 24857768 - 24857852
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||   |||||| ||||||||||||||||||||   ||||||||||||    
T  24857768 tatatacaaatttaatactacaaccaactttcttaatctctacaattttagcaaaaggctcctatatttaaaaacggaggtagta 24857852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 39971229 - 39971311
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||   |||||||||||||||| |||||||||||||||||  |||||||| | ||||||||||||    
T  39971229 tatacaaatttaatactacaactcactttcttaatctccgcaattttggcaaaaggcttatatatttaagaacggaggtagta 39971311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 27834157 - 27834242
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtag 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||  || |||||||| ||| ||| |||||||    
T  27834157 tatatacaaatttaatactacaaccaactttcttaatctacgtaatttttgcaaaagattcatatatttaaggatggatgtagtag 27834242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 39692478 - 39692394
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||| | ||||||||||||| ||||||||||||  |||||| ||||||||||||| ||||| ||||||    
T  39692478 tatatacaaatttaatattactaccaactttcttaatttccgtaattttgataaaaggttcctatatttaggaacggatgtagta 39692394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 16636823 - 16636748
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggt 95  Q
    |||||||||||| |||||  ||||||||||||||| | |||||||||||||| ||| |||||||||||||||||||    
T  16636823 acaaatttaatattacaacaaactttcttaatctctgcaattttggcaaaagactcttatatttagggacggaggt 16636748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 8356363 - 8356281
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtag 97  Q
    |||||| |||||||||| ||| |||||||||||||||  | |||||||||  |||| ||||||||||||||||||||||||||    
T  8356363 tatatataaatttaatattactatcaactttcttaattccagtaattttgataaaatgctcctatatttagggacggaggtag 8356281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 6328627 - 6328543
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| | ||||   |||||||||||  ||||||| |||||    
T  6328627 tatatataaatttaatactacaaccaactttcttaatctccgtaatttttgtaaaataatcctatatttaatgacggagatagta 6328543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 5283263 - 5283341
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggta 96  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||||   ||||||| |||  ||||||||||    
T  5283263 atacaaatttaatactacaacaaactttcttaatctccgtaatttttgcaaaatattcctataattaaagacggaggta 5283341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 28414508 - 28414435
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggac 89  Q
    |||||| ||||||||||||||||  ||||||||||||||||||| |||| |||||| |||| |||||||||||||    
T  28414508 tatatataaatttaatactacaacaaactttcttaatctccgtagtttt-gcaaaaagctcatatatttagggac 28414435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 16926665 - 16926722
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaagg 72  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||| ||||||||    
T  16926665 tatatacaaatttaatactacaaccaactttcttaatctccacaatttttgcaaaagg 16926722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 18251233 - 18251317
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||| | ||||||| |||||   ||| |||||| ||||||| || |||||||||||||||||||||||    
T  18251233 tatatacaaatttaatattactaccaacttttttaattctcgtgattttgacaaaaggatcatatatttagggacggaggtagta 18251317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 41493499 - 41493583
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||| | ||||||| ||||| | | | |||||| ||||| | || |||||||||| ||||||||||||    
T  41493499 tatatacaaatttaatactactaccaacttttttaattttcatgattttgacaaaatggtcatatatttaggtacggaggtagta 41493583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 40004206 - 40004149
Alignment:
Q  42 ctttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||| ||||| ||||| |||||||| || |||||||||||||||||| ||||    
T  40004206 ctttcttaatttccgtgattttagcaaaaggatcttatatttagggacggagggagta 40004149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 41470858 - 41470914
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaag 71  Q
    ||||||||||||||||| ||| |||||||||||||||| || | ||||||| |||||    
T  41470858 tatatacaaatttaatattactatcaactttcttaatccccatgattttggtaaaag 41470914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 8100212 - 8100162
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaa 70  Q
    ||||||||||||| |  |||||||||||||||  |||||||||||||||||    
T  8100212 acaaatttaatacaaatatcaactttcttaattcccgtaattttggcaaaa 8100162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 22581533 - 22581468
Alignment:
Q  41 actttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagtgttta 106  Q
    ||||| |||||  |||| ||||| |||||||| || ||||| ||||||||||||||||||| ||||    
T  22581533 actttattaattcccgtgattttagcaaaagggtcttatatatagggacggaggtagtagttttta 22581468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 15190638 - 15190554
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| |||| |||||||| |  ||| ||| |||||||  |||| |||||||||||||| || ||||| |||||||||||| ||||    
T  15190638 tataaacaattttaatacaaatatccactatcttaattcccgtgattttggcaaaaggatcttatatatagggacggagggagta 15190554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 42561167 - 42561090
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| |||||||| |  ||| ||| ||||||| |||||||||||||||||||| |  ||||| |||||||||||| ||||    
T  42561167 acaactttaatacaaatatccactatcttaatttccgtaattttggcaaaagggt--tatatatagggacggagggagta 42561090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 21265432 - 21265516
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  21265432 tatatacaaatttaatattacaatcaactttcttaatctccgcaattttggcaaaaggctcctatatttaaggacggaggtagta 21265516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 6656569 - 6656485
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  6656569 tatatacaaatttaatactacaaccaactttcttaatctccgtaatttttgcaaaaggctcctataattagggacgaaggtagta 6656485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 29509018 - 29509102
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  29509018 tatatacaaatttaatactacaaccaactttcttaatctccgtaattttggcaaaaaactcctatatttagagacggaggtagta 29509102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 37780039 - 37779955
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  37780039 tatatacaaatttaatactacaacaaactttcttaatctccgcaattttagcaaaaggctcctatatttagggacggaggtagta 37779955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 47109644 - 47109560
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47109644 tatatacaaatttaatactacaactaactttcctaatctccgtaatttttgcaaaaggctcctatatttagggacggaggtagta 47109560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 17468101 - 17468191
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagtgttt 105  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||| |||||    
T  17468101 tatatataaatttaatactacaaccaactttcttaatctccgtaatttttgaaaaatgctcctatatttagggacggaggtagtattgttt 17468191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 18872932 - 18873014
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||  || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18872932 tatacaaatttaatactacaacaaattttcttaatctccgtaattttagcaaaaggctcctatatttagggacggaggtagta 18873014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 23390170 - 23390088
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||  || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23390170 tatacaaatttaatactacaacaaattttcttaatctccgtaattttagcaaaaggctcctatatttagggacggaggtagta 23390088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 53564180 - 53564094
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  53564180 tatacacaactttaatactacaaccaactttcttaatctccgtaatttttgcaaaaggctcctatatttagggacggatgtagtagt 53564094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 7776768 - 7776688
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggt 95  Q
    ||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  7776768 tatatacaaatttaatactacaaccaacttttttaatctccgcaattttggcaaaaggctcctatatttagggactgaggt 7776688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 24072306 - 24072222
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  24072306 tatatacaaatttaataccacaaccaactttcttaatctccgtaattttttcaaaaggctcatatatttagggacggaggtagta 24072222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 32684808 - 32684892
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  32684808 tatatacaaatttaatactacaactaactttcttaatctccgcaattttgacaaaagactcctatatttagggacggaggtagta 32684892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 39797602 - 39797686
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||  ||||||||||||||||||||||||||||    
T  39797602 tatatacaaatttaatactacaaccaactttcttaatctctgcaattttggcaaagtgctcctatatttagggacggaggtagta 39797686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 20783399 - 20783477
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggag 93  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  20783399 tatatacaaatttaatactgcaaccaactttcttaatctccgtaattttggcaaaagcctcttatatttagggacggag 20783477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 28501208 - 28501127
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  28501208 atacaaatttaatgctacaaccaactttcttaatctctgtaatttttgcaaaaggctcctataattagggacggaggtagta 28501127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 50621559 - 50621486
Alignment:
Q  19 tacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacgga 92  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  50621559 tacaaatttaatactacaaccaactttattaatctccgtaattttggcaaaaggttcctatatttagggacgga 50621486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 3085655 - 3085739
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||||||    
T  3085655 tatatacaaatttaatactacaacaaactttcttaatctccgcaattttgacaaaaggctcctatatttagggacagatgtagta 3085739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 13549192 - 13549276
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||| |||  ||||||||||||| |||| |||||||||||||||||||||||    
T  13549192 tatatacaaatttaatactacaaccaactttcttaatgtccacaattttggcaaaatgctcttatatttagggacggaggtagta 13549276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 19596265 - 19596181
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| |||||||||| |||||| ||||||    
T  19596265 tatatacaaatttaatactacaaccaactttcttattctccgtaattttggcaaaatgcttctatatttagagacggatgtagta 19596181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 38613591 - 38613675
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||  |||||| |||||||||||||||||||| ||||||    
T  38613591 tatatataaatttaatactacaatcaactttcttaatctcagtaatttttacaaaagactcctatatttagggacggaagtagta 38613675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 13498310 - 13498219
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagtgttta 106  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||| ||||||||||| |||||||||||||||| || ||| ||||||    
T  13498310 tatatacaaatttaatactacaaccaactttctttttctccgtaatttttgcaaaaggctcatatatttagggacggaagttgtactgttta 13498219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 30868622 - 30868539
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||| | ||| ||||||||    
T  30868622 tatatacaaatttaatacta-aatcaactttcttaatctccgtaatttttgcaaaaggctcctataattaagaacgtaggtagta 30868539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 35909855 - 35909939
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||||||  ||||| || ||||||||||||||||||||||||    
T  35909855 tatatacaaatttaatactacaaccaactttcttaatctccgcgattttgataaaagacttctatatttagggacggaggtagta 35909939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 41333874 - 41333815
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggct 74  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41333874 tatatacaaatttaatactacaaccaactttcttaatctccgtaattttggcaaaaggct 41333815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 2507679 - 2507598
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggta 96  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||| ||| |||||||||||||||||||| ||| |||||||    
T  2507679 tatatacaaatttaatactacaaccaattttcttaatctccataaattttgcaaaaggctcctatatttaaggatggaggta 2507598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 6629300 - 6629216
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||||| |||||||||||||||||| |||||| ||||||   || |||||||||||||||||||||||    
T  6629300 tatatacaaatttaatattacaaccaactttcttaatctccgcaattttagcaaaaaaatcatatatttagggacggaggtagta 6629216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 52180360 - 52180292
Alignment:
Q  31 actacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||||||||    
T  52180360 actacaatcaactttcttaatctccgcaatttttgcaaaaggctcatatatttaggaacggaggtagta 52180292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 26889718 - 26889644
Alignment:
Q  22 aaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggta 96  Q
    |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||    
T  26889718 aaatttaatactacaaccaactttcttaatcttcgtaatttttgcaaaaggctcgtataattatggacggaggta 26889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 30010676 - 30010593
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||| |||  ||||||| |||||||||| |||||||| |||| |||||||||    
T  30010676 tatatacaaatttaatactacaaccaactttcttaatttccacaattttgacaaaaggctcatatatttaaggac-gaggtagta 30010593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 5375376 - 5375289
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagtgtttat 107  Q
    |||| |||||||| |  ||| ||| ||||||| ||||| |||||||||||||| || ||||| |||||||||||| |||||| |||||    
T  5375376 acaactttaatacaaatatccactatcttaatttccgtgattttggcaaaagggtcttatatatagggacggagggagtagtatttat 5375289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 53910368 - 53910430
Alignment:
Q  37 atcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||   |||||||||||||||||| || ||||| ||||||| |||||||||    
T  53910368 atcaactttcttaattctcgtaattttggcaaaagggtcttatatatagggacagaggtagta 53910430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 47683311 - 47683388
Alignment:
Q  24 atttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||||||||||  ||| ||| |||||||  |||| |||||  ||||||| ||||||| ||||||||||||||||||||    
T  47683311 atttaatactaatatccactatcttaattcccgttattttttcaaaaggatcctataattagggacggaggtagtagt 47683388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 47228521 - 47228467
Alignment:
Q  45 tcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||| ||||| |||||||||||||| || ||||| |||||||||||| ||||    
T  47228521 tcttaatttccgtgattttggcaaaagggtcttatatatagggacggagggagta 47228467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 50138482 - 50138403
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggta 96  Q
    ||||||||||||||||| ||| | |||||||||||||  || | |||||| ||||||  || |||||||||||||| |||||    
T  50138482 tatatacaaatttaatattaccaccaactttcttaattcccatgattttgtcaaaag--tcttatatttagggacgaaggta 50138403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 2615762 - 2615681
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||| |||||||| |  |||||||||||||||  |||| ||||| ||||||||  | |||| ||||||||||||| ||||||    
T  2615762 acaactttaatacaaatatcaactttcttaattcccgtgattttagcaaaagggccttataattagggacggagggagtagt 2615681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 9328058 - 9327978
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtag 100  Q
    |||| |||||||| |  ||||||| |||||||  |||| |||||| ||||||| || ||||| |||||||||||| |||||    
T  9328058 acaactttaatacaaatatcaactatcttaattcccgtgattttgacaaaagggtcttatatatagggacggagggagtag 9327978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 32814631 - 32814583
Alignment:
Q  189 ggttttgtctaacatgcataagcaaaattgtcttgcatcatgcacaaat 237  Q
    |||||||||||||||||| |||| |||| ||| |||||||| |||||||    
T  32814631 ggttttgtctaacatgcacaagcgaaatggtcctgcatcatacacaaat 32814583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 39670969 - 39671025
Alignment:
Q  45 tcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||| ||||| |||||  ||||||| || |||| ||||||||||||||||||||    
T  39670969 tcttaatttccgttattttttcaaaagggtcttataattagggacggaggtagtagt 39671025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 53630032 - 53630084
Alignment:
Q  42 ctttcttaatctccgtaattttggcaaaaggctcctatatttagggacggagg 94  Q
    ||||||||||  |||| ||||| |||||||| || ||||||||||||||||||    
T  53630032 ctttcttaattcccgtgattttagcaaaagggtcttatatttagggacggagg 53630084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 12918662 - 12918578
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  12918662 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttggcaaaaggctcatatatttagggacggaggtagta 12918578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 29719535 - 29719451
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  29719535 tatatacaaatttaatactacaaccaactttcttaatctccgtaatttttgcaaaaggctcctatatttaaggacggaggtagta 29719451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 32969050 - 32968966
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  32969050 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttggcaaaagactcctatatttagggacggaggtagta 32968966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 44561520 - 44561436
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  44561520 tatatacaaatttaatactacaaccaactttcttaatctccgtaatttttgcaaaaggcttctatatttagggacggaggtagta 44561436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 45404587 - 45404671
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45404587 tatatacaaatttaatactacaacaaactttcttaatctccgcaattttggcaaaaggctcctatatttagggacggaggtagta 45404671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 47008326 - 47008242
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47008326 tatatacaaatttaatactacaaccaacttttttaatctccgtaattttggcaaaagggtcctatatttagggacggaggtagta 47008242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 48902533 - 48902449
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  48902533 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttggcaaaatgctcctatatttagggacggaggtagta 48902449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 30820116 - 30820197
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  30820116 atacaaatttaatactacaaccaactttcttaatctccgtaattttgacaaaaggctcttatatttagggacggaggtagta 30820197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 31541235 - 31541319
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  31541235 tatatacaaatttaatactacaaccaactttcttaatctccacaattttggcaaaaggctcctgtatttagggacggaggtagta 31541319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 34811526 - 34811610
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  34811526 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttgacaaaaggctactatatttagggacggaggtagta 34811610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 1111469 - 1111388
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  1111469 atacaaatttaatgctacaaccaactttcttaatctccgtaatttttgcaaaaggctcctataattagggacggaggtagta 1111388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 28810945 - 28810861
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||    
T  28810945 tatatacaaatttaatactacaaccaactttcttaatctccgtaattttagcaaaagacttctatatttaggaacggaggtagta 28810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 36584918 - 36585002
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  36584918 tatatacaaatttaatactacaaccgactttcttaatctccgcaattttgacaaaaagctcctatatttagggacggaggtagta 36585002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 42526449 - 42526365
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||    
T  42526449 tatatacaaatttaatactataatcaactttcttaatctctgtaattttgacaaaaggctcttatatttaaggacggaggtagta 42526365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 48904087 - 48904003
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||    
T  48904087 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttgacaaaatgctcctatatttaggaacggaggtagta 48904003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 4564451 - 4564536
Alignment:
Q  16 atatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  4564451 atatacaaatttaatattacaaccaactttcataatctccgtaattttggcaaaagactcatatatttagagacggaggtagtagt 4564536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 28875076 - 28874999
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacgga 92  Q
    ||||||||||||||||||||||| |||||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  28875076 tatatacaaatttaatactacaaccaactttcttaatctccacaattttggcaaaatgctcctatatttagggacgga 28874999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 48655069 - 48654992
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacgga 92  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||| ||||||||||||||||||||    
T  48655069 tatatacaaatttaatactacaatcaactttcctaatctcggtaatttttgcaaaagactcctatatttagggacgga 48654992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 54927911 - 54927830
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  54927911 atacaaatttaatactacaaccaacttgcttaatctccgtaatttttgcaaaaagctcctataattagggacggaggtagta 54927830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 8379890 - 8379974
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||  |||||| || ||||||||||||||||||||||||    
T  8379890 tatatacaaatttaatactacaactaactttcttaatctccgtaattttttcaaaagacttctatatttagggacggaggtagta 8379974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 34021819 - 34021735
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||    
T  34021819 tatatacaaatttaatactacaaccaacttttttaatctctgtaattttggcaaaatgctcctaaatttaaggacggaggtagta 34021735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 40214900 - 40214820
Alignment:
Q  19 tacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||||||    
T  40214900 tacaaatttaatactacaaccaactttcctaatctccgtaattttgacaaaaggctcctatatttaaggatggaggtagta 40214820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 42044078 - 42043994
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||| |||||||||||||||||| |||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||    
T  42044078 tatacacaaatttaatactacaaccaactttcttaatctccgcatttttgacaaaaagctcctatatttagggacggaggtagta 42043994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 27646127 - 27646046
Alignment:
Q  18 atacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  27646127 atacaaatttaatgctacaaccaacttttttaatctccgtaatttttgcaaaaagctcctataattagggacggaggtagta 27646046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 42755561 - 42755638
Alignment:
Q  22 aaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| | ||||||||||||    
T  42755561 aaatttaatactacaaccaactttcttaatctccgcagttttggcaaaaggctcctatatttaagaacggaggtagta 42755638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 17589700 - 17589616
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| || | || |||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  17589700 tatatacaaatttaatactacaaccaccatttttaatctctgcaattttggcaaaagggtcctatatttagggacggaggtagta 17589616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 24813797 - 24813881
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| || ||||||||||||| | |||||||||||||| ||| ||||||||||||| |||||||||    
T  24813797 tatatacaaatttaatactacaaccagctttcttaatctctgcaattttggcaaaagactcttatatttagggacagaggtagta 24813881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 38341161 - 38341245
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||| |||||||| ||||| |||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  38341161 tatatacagatttaatattacaaccaactttcttaatctctgtaatttttgtaaaaggctcgtatatttagggacggaggtagta 38341245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 52693524 - 52693436
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagtgt 103  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||| |||| ||||||||||||| ||||||| |||||    
T  52693524 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttaacaaaaagctcttatatttagggacagaggtagcagtgt 52693436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 21497635 - 21497554
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggta 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |||||||| |||| ||||||||||    
T  21497635 tatatacaaatttaatactacaatcaactttcttaatctccgtaatttttataaaatactcctataattagagacggaggta 21497554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 22494469 - 22494395
Alignment:
Q  26 ttaatactacaatcaactttcttaatctccgtaattttggcaaaaggct-cctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | | ||||||| |||||||||||||||||    
T  22494469 ttaatactacaatcaactttctaaatctccgtaattttggcaaaaagttgcctatatatagggacggaggtagta 22494395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 4836517 - 4836437
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcc--tatatttagggacggag 93  Q
    ||||| |||||||||||||| ||  ||||||||||||||||||||||||  |||||| ||||  |||||||||||||||||    
T  4836517 tatattcaaatttaatactaaaactaactttcttaatctccgtaatttttacaaaagactcctatatatttagggacggag 4836437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 29447619 - 29447551
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatattt 83  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||| | ||||| | |||||||||    
T  29447619 tatatacaaatttaatactacaactaattttcttaatctccgtaatttttgtaaaagacacctatattt 29447551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 2801298 - 2801215
Alignment:
Q  16 atatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||  |||||||||||||||  |||| |||||| |||||  ||| |||||||||||| |||| |||||    
T  2801298 atatacaaatttaatactattatcaactttcttaattcccgtgattttgacaaaaaactcttatatttagggatggagttagta 2801215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 35052628 - 35052537
Alignment:
Q  190 gttttgtctaacatgcataagcaaaattgtcttgcatcatgcacaaatgtcattt-cactatttgatcgaaatgtcatatcatatttaattt 280  Q
    ||||||||||||||||| |||||||||  | ||||||||||||||| |||| ||| ||| ||| |||| ||| |||| ||||||||||||||    
T  35052628 gttttgtctaacatgcacaagcaaaatgatattgcatcatgcacaagtgtcttttccaccattggatcaaaaagtcacatcatatttaattt 35052537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 33290557 - 33290638
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggta 96  Q
    |||| |||||||||||||||  ||||||||||||||| ||||| |||||| | ||||| || |||| |||| ||||||||||    
T  33290557 tataaacaaatttaatactattatcaactttcttaatttccgtgattttgactaaaggttcatataattagagacggaggta 33290638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 29383233 - 29383312
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||| |||||  ||||| |||||||||  |||| |||||  ||||| | ||||||||||||||||||||||||||    
T  29383233 acaaatttattactattatcaattttcttaattcccgttattttttcaaaaaggtcctatatttagggacggaggtagta 29383312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 34265548 - 34265489
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggct 74  Q
    ||||||||||||||||||||| | | |||||||||||  ||||||||||| |||||||||    
T  34265548 tatatacaaatttaatactactaccgactttcttaattcccgtaattttgacaaaaggct 34265489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 10045079 - 10045139
Alignment:
Q  41 actttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||||||||||  |||||||||| |||||||| || |||| ||||||||||| ||||||||    
T  10045079 actttcttaattcccgtaattttagcaaaagggtcttataattagggacggatgtagtagt 10045139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 51
Target Start/End: Complemental strand, 41392698 - 41392667
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaat 51  Q
    ||||||||||||||||||||||||||||||||    
T  41392698 acaaatttaatactacaatcaactttcttaat 41392667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 26058792 - 26058838
Alignment:
Q  55 cgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||||||||||||||||| || ||||| |||||||||||| ||||||    
T  26058792 cgtaattttggcaaaagggtcttatatatagggacggagggagtagt 26058838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 41824347 - 41824405
Alignment:
Q  41 actttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||| ||||||||||| |||||||| || ||||| | |||||| ||||||||    
T  41824347 actttcttaatttccgtaattttagcaaaagggtcttatatattgggacgaaggtagta 41824405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 14428849 - 14428906
Alignment:
Q  42 ctttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||  |||||||||| |||||||| || |||| ||||||||||||| ||||    
T  14428849 ctttcttaattcccgtaattttagcaaaagggtcttataattagggacggagggagta 14428906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 49596630 - 49596683
Alignment:
Q  192 tttgtctaacatgcataagcaaaattgtcttgcatcatgcacaaatgtcatttc 245  Q
    ||||||||||||| | ||||||||| ||||| |||||||||||  |||||||||    
T  49596630 tttgtctaacatggacaagcaaaatagtcttacatcatgcacacgtgtcatttc 49596683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 7181594 - 7181650
Alignment:
Q  45 tcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||||||  |||| |||||||||||||| || ||||| |||||||||||| ||||||    
T  7181594 tcttaattcccgtgattttggcaaaagggtcttatatatagggacggagggagtagt 7181650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 36005743 - 36005803
Alignment:
Q  41 actttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||||||||||  |||| ||||| |||||||| || |||| ||||||||||||| ||||||    
T  36005743 actttcttaattcccgtgattttagcaaaagggtcttataattagggacggagggagtagt 36005803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 30858151 - 30858235
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  30858151 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttggcaaaagactcctatatttagggacggaggtagta 30858235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 36750706 - 36750624
Alignment:
Q  17 tatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36750706 tatacaaatttaatactacaacccactttcttaatctccgcaattttggcaaaaggctcctatatttagggacggaggtagta 36750624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 6028555 - 6028639
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  6028555 tatatacaaatttaatactataatcaactttcttaatctccgtaatttttgcaaaagactcttatatttagggacggaggtagta 6028639  T

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Target: chr2; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 18970553 - 18970469
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||    
T  18970553 tatatacaaatttaatactacaaccaactttcttaatctccgcaatttttgcaaaaggctcatatatttagggacggaggtagta 18970469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 31633667 - 31633587
Alignment:
Q  19 tacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31633667 tacaaatttaatattacaaccaactttcttaatctccgtaattttggcaaaagactcctatatttagggacggaggtagta 31633587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 34432025 - 34431941
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||    
T  34432025 tatatacaaatttaatactacaatcaactttcttaatctccgcaattttggcaaaaggctcttatatttagagacggagatagta 34431941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 9701283 - 9701369
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  9701283 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttgacaaaaggctcttatatttaggaacggaggtagtagt 9701369  T

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Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 13215052 - 13214968
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  13215052 tatatacaaatttaatactacaactaactttcttaatctccgtaatttttgcaaaaggttcctataattagggacggaggtagta 13214968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 41422731 - 41422809
Alignment:
Q  21 caaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  41422731 caaatttaatactacaaccaactttcttaatctccgcaattttaacaaaaggctcctatatttagggacggaggtagta 41422809  T

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Target: chr2; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 11944462 - 11944378
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||| |||||||||| | ||||||||||    
T  11944462 tatatacaaatttaatactacaatcaattttcttaatcttcgtaatttttgcaaaaggctcgtatatttaggaatggaggtagta 11944378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 21838829 - 21838913
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| || |||||||||| |||||| ||||||    
T  21838829 tatatacaaatttaatactacaaccaactttcttaatctccgcaattttgacaaaagacttctatatttagagacggatgtagta 21838913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 28566364 - 28566448
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||  ||||||||||| | || |||||||||    
T  28566364 tatatacaaatttaatactacaattaactttcttaatctccgtaattttgacaaaagagtcctatatttaagaactgaggtagta 28566448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 40544539 - 40544623
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||| ||||| ||||||||||||||||| | ||||| ||||||| |||||||| ||||||||||||||||||    
T  40544539 tatatacaaatttaatattacaaccaactttcttaatctccatcatttttgcaaaagactcctataattagggacggaggtagta 40544623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 41494446 - 41494362
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||| |||||||||||||||||  ||||||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||    
T  41494446 tatattcaaatttaatactacaactaactttcttaatctccgcaattttaacaaaagactcctatatttagggacggaggtagta 41494362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 27725514 - 27725450
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctat 79  Q
    ||||| || ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  27725514 tatatgcacatttaatactacaatcaactttcttaatctccgcaatttttgcaaaaggctcctat 27725450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 43700838 - 43700918
Alignment:
Q  19 tacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||||||||| ||| ||||||||||| |||  |||| ||||||| |||||||| ||||||||||||||||||    
T  43700838 tacaaatttaatactacaaccaattttcttaatcttcgtgttttttgcaaaagactcctataattagggacggaggtagta 43700918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 2788162 - 2788084
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggag 93  Q
    ||||||||||||||||||||||| ||||||| |||||||| | ||||||| ||||||| | ||||||||| | ||||||    
T  2788162 tatatacaaatttaatactacaaccaacttttttaatctctgcaattttgacaaaaggtttctatatttaagaacggag 2788084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 4408601 - 4408528
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacg 90  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||  || |||  |||||||||| ||||||    
T  4408601 tatatacaaatttaatacta--atcaactttcttaatctccgtaatttttacataagattcctatatttggggacg 4408528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 30830167 - 30830118
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttg 64  Q
    ||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  30830167 tatatacaaatttaatactacaatcaacttttttaatctccccaattttg 30830118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 12873871 - 12873951
Alignment:
Q  19 tacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||||| |||||  |||||||||||| || || |||||| ||||||| | ||||| |||| | |||||||||||    
T  12873871 tacaaatttaatattacaactaactttcttaatttctgtgattttgacaaaaggattctataattagagtcggaggtagta 12873951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 1422221 - 1422163
Alignment:
Q  41 actttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||  ||||||||||  ||||||| || ||||| |||||||||||||||||    
T  1422221 actttcttaattcccgtaattttaacaaaagggtcttatatatagggacggaggtagta 1422163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 15571425 - 15571483
Alignment:
Q  41 actttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||||||| ||||| ||||| |||||||| || ||||| |||||| ||||||||||    
T  15571425 actttcttaatttccgtgattttagcaaaagggtcttatatatagggaaggaggtagta 15571483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 44436278 - 44436224
Alignment:
Q  45 tcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||  |||| |||||||||||||| || ||||| |||||||||||||||||    
T  44436278 tcttaattcccgtgattttggcaaaagggtcttatatatagggacggaggtagta 44436224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 19034633 - 19034710
Alignment:
Q  24 atttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    ||||||||| |  ||| ||| |||||||  |||| |||||  ||||||| ||||||| ||||||||||||||||||||    
T  19034633 atttaatacaaatatccactatcttaattcccgttattttttcaaaaggatcctataattagggacggaggtagtagt 19034710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 2060560 - 2060616
Alignment:
Q  45 tcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||||||  |||| |||||  ||||||| ||||||| ||||||||||||||||||||    
T  2060560 tcttaattcccgttattttttcaaaagggtcctataattagggacggaggtagtagt 2060616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 246668 - 246752
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  246668 tatatacaaatttaatactacaactaactttcttaatctccgcaattttggcaaaaggctcctatatttagggacggaggaagta 246752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 36189 - 36109
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggt 95  Q
    |||||||||||||||||| |||| ||||||||| |||||||  ||||||||||||||||||||||||||||||||| ||||    
T  36189 tatatacaaatttaataccacaaccaactttctcaatctccacaattttggcaaaaggctcctatatttagggacgaaggt 36109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 103887 - 103804
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagt 98  Q
    |||| |||||||||||||||  ||||| ||| |||||  ||||||||||||||||| | ||||||| ||||||| |||||||||    
T  103887 tataaacaaatttaatactattatcaatttttttaattcccgtaattttggcaaaatggtcctataattagggatggaggtagt 103804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 586 - 531
Alignment:
Q  15 tatatacaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaa 70  Q
    |||||| |||||||||||||| ||||||| ||||||| || |||||||||||||||    
T  586 tatatataaatttaatactactatcaactatcttaatttcggtaattttggcaaaa 531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 6933 - 6879
Alignment:
Q  45 tcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagta 99  Q
    ||||||| ||||| |||||||||||||| || ||||| |||||||||||| ||||    
T  6933 tcttaatttccgtgattttggcaaaagggtcttatatatagggacggagggagta 6879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 8436 - 8517
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||| |||||||| |  ||| ||| |||||||  |||| |||||||||||||| || ||||| |||||||||||| ||||||    
T  8436 acaactttaatacaaatatccactatcttaattcccgtgattttggcaaaagggtcttatatatagggacggagggagtagt 8517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 47858 - 47939
Alignment:
Q  20 acaaatttaatactacaatcaactttcttaatctccgtaattttggcaaaaggctcctatatttagggacggaggtagtagt 101  Q
    |||| |||||||| |  ||| |||||||||||  |||| ||||| |||||||| || |||| ||||||||||||| ||||||    
T  47858 acaactttaatacaaatatccactttcttaattcccgtgattttagcaaaaggatcttataattagggacggagggagtagt 47939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 3 - 55
Alignment:
Q  42 ctttcttaatctccgtaattttggcaaaaggctcctatatttagggacggagg 94  Q
    ||||||||||  |||| ||||| |||||||| || ||||||||||||||||||    
T  3 ctttcttaattcccgtgattttagcaaaagggtcttatatttagggacggagg 55  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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