View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1362_low_71 (Length: 241)
Name: NF1362_low_71
Description: NF1362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1362_low_71 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 35288504 - 35288732
Alignment:
| Q |
1 |
gttagtgaaccttgtttcatctcattcattgatagagttttttgctctttgttgttatttgtcattttaggtgaatatgctacgagagaggaacacgagt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35288504 |
gttagtgaaccttgtttcatctcattcattgatagagtcttttgctctttgttgttatttgtcattttaggtgaatatgctacgagagaggaacacgagt |
35288603 |
T |
|
| Q |
101 |
tatggcaccatcaagtttgttgatataggctcagatgattactctcccgacgagaatcagggcctcgactatcaaactgttagtcccttctctatggcct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35288604 |
tatggcaccatcaagtttgttgatataggctcagatgattactctcccgacgagaatcagggcctcgactatcaaactgttagtcccttctctatggcct |
35288703 |
T |
|
| Q |
201 |
cgaagctgatttatttatttttggtttca |
229 |
Q |
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||||||||||||||||||||||| ||||| |
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| T |
35288704 |
cgaagctgatttatttatttttgctttca |
35288732 |
T |
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