View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13630_high_9 (Length: 443)
Name: NF13630_high_9
Description: NF13630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13630_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 339; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 1 - 430
Target Start/End: Original strand, 46411061 - 46411494
Alignment:
| Q |
1 |
catccacatatacttacaactttgttagccgcaatagacaaaacgcgtgtttgaccccattgtcacgaagactttcgacataatgagtcgatctatttgg |
100 |
Q |
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|||||||||||||||||||||||||||||| |||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46411061 |
catccacatatacttacaactttgttagccacaataggcagaacgtgtgtttgaccccattgtcacgaagactttcgacataatgagtcgatctatttgg |
46411160 |
T |
|
| Q |
101 |
tagtcataaactctgatacattgttgggttatgagggaagtctgaggatcatttatattggataataaacaaccacacnnnnnnnnnn----ttaaacag |
196 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
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| T |
46411161 |
tagtcataaattctgatacattgttgggttatgagggaagtctgaggatcattcatattggataataaacaaccacaaaaaaaaaaaaaaaattaaacac |
46411260 |
T |
|
| Q |
197 |
tacatcttaactcaaaatctcaagacatgtgtcaaacttatctatatgaatgttcaactcaatgcagatgatccaaataaatgtggtgaacaaaaagtgt |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46411261 |
tacatcttaactcaaaatctcaagacatgtgtcaaacttatctatatgaatgttcgactcaatgcagatgatccaaataaatgtggtgaacaaaaagtgt |
46411360 |
T |
|
| Q |
297 |
caacaaccaactaaatcaagaaagtacacaagcctacgagtaagaacaaaaagatgaagaaaagaccataatatgctacttcaatgtaggcatgttttct |
396 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
46411361 |
caacaaccaactaaatcaagaaagtacacaagcctacgagtaagaacaaaaagatgaagaaaagaccataatatgctacttcaatgtaggcacgttttct |
46411460 |
T |
|
| Q |
397 |
cttgctcataccttgtttcgtcgatctgatgatg |
430 |
Q |
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||||||||||||||||| ||||||||||| |||| |
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| T |
46411461 |
cttgctcataccttgttccgtcgatctgacgatg |
46411494 |
T |
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