View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13631_low_17 (Length: 227)
Name: NF13631_low_17
Description: NF13631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13631_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 70 - 225
Target Start/End: Original strand, 27197824 - 27197979
Alignment:
| Q |
70 |
ctcactgcattatttaaatagttcatatttcatttttgagttttataatcattatacatatatcacaaccttatatgactccagactttctcttgaggtg |
169 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
27197824 |
ctcactacattatttaaatagttcatatttcatttttgagttttataatcattatacatatatcacaaccttatatgactctagactttctcttgaggtg |
27197923 |
T |
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| Q |
170 |
attcttgatattgtttttctaccaatgtcgatgaaaatcaattcaaaaataagatc |
225 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
27197924 |
attcttgatattgtttttctatcaatgtcgatgaaaatcaattcaaaaataagatc |
27197979 |
T |
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