View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13632_high_25 (Length: 221)

Name: NF13632_high_25
Description: NF13632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13632_high_25
NF13632_high_25
[»] chr2 (42 HSPs)
chr2 (1-158)||(18904370-18904527)
chr2 (64-158)||(38840497-38840591)
chr2 (23-164)||(22848188-22848329)
chr2 (64-158)||(7899886-7899980)
chr2 (61-158)||(36449781-36449878)
chr2 (1-163)||(11258751-11258914)
chr2 (35-165)||(22587929-22588058)
chr2 (52-158)||(23869527-23869632)
chr2 (17-158)||(18299376-18299517)
chr2 (23-158)||(13030295-13030427)
chr2 (23-158)||(18905951-18906085)
chr2 (30-162)||(36450891-36451022)
chr2 (64-162)||(7898690-7898788)
chr2 (23-158)||(18797249-18797385)
chr2 (30-137)||(28617946-28618052)
chr2 (64-158)||(38839245-38839339)
chr2 (32-163)||(802563-802693)
chr2 (32-158)||(18300697-18300820)
chr2 (75-158)||(41879227-41879310)
chr2 (1-158)||(11938730-11938886)
chr2 (1-137)||(24475248-24475385)
chr2 (66-158)||(1034475-1034567)
chr2 (17-129)||(11996739-11996851)
chr2 (64-158)||(41878095-41878191)
chr2 (4-163)||(11257620-11257779)
chr2 (50-158)||(18868927-18869033)
chr2 (52-163)||(13570549-13570660)
chr2 (31-158)||(26544152-26544278)
chr2 (85-163)||(13567970-13568048)
chr2 (31-137)||(22587525-22587630)
chr2 (32-131)||(810753-810852)
chr2 (23-173)||(8535619-8535767)
chr2 (31-158)||(26545492-26545619)
chr2 (78-137)||(32739647-32739706)
chr2 (50-158)||(1033214-1033320)
chr2 (23-137)||(18869125-18869241)
chr2 (61-148)||(1093147-1093234)
chr2 (85-155)||(24476869-24476937)
chr2 (23-101)||(22067745-22067823)
chr2 (85-158)||(16446157-16446230)
chr2 (103-163)||(21837298-21837356)
chr2 (88-172)||(5819741-5819824)
[»] chr4 (51 HSPs)
chr4 (5-158)||(1290142-1290296)
chr4 (61-158)||(1963199-1963296)
chr4 (23-159)||(12129625-12129761)
chr4 (5-158)||(10471332-10471486)
chr4 (17-158)||(49307985-49308124)
chr4 (67-170)||(8758844-8758947)
chr4 (19-158)||(19750534-19750672)
chr4 (19-158)||(19789134-19789272)
chr4 (23-158)||(1835065-1835200)
chr4 (23-160)||(8155739-8155875)
chr4 (23-158)||(17388174-17388308)
chr4 (5-158)||(25685766-25685920)
chr4 (5-165)||(10470542-10470703)
chr4 (4-162)||(1289096-1289255)
chr4 (45-158)||(10447009-10447123)
chr4 (5-158)||(25684937-25685091)
chr4 (31-156)||(31599794-31599919)
chr4 (31-158)||(1834122-1834250)
chr4 (23-158)||(17382996-17383130)
chr4 (66-159)||(35935539-35935632)
chr4 (5-158)||(13386017-13386173)
chr4 (31-158)||(31600956-31601083)
chr4 (31-158)||(52491578-52491705)
chr4 (5-158)||(5526070-5526223)
chr4 (45-158)||(48780251-48780364)
chr4 (5-163)||(5525358-5525516)
chr4 (31-158)||(10448231-10448358)
chr4 (5-158)||(13509303-13509456)
chr4 (61-158)||(1964442-1964539)
chr4 (54-163)||(21539065-21539174)
chr4 (65-158)||(26421627-26421719)
chr4 (5-163)||(13386476-13386636)
chr4 (31-158)||(35934347-35934472)
chr4 (31-158)||(50909643-50909771)
chr4 (31-158)||(8757678-8757804)
chr4 (50-163)||(48781036-48781148)
chr4 (23-163)||(3928821-3928961)
chr4 (23-163)||(14868888-14869026)
chr4 (23-163)||(14876908-14877046)
chr4 (1-140)||(46638665-46638805)
chr4 (31-162)||(37728536-37728666)
chr4 (78-162)||(55603549-55603632)
chr4 (61-164)||(27257961-27258063)
chr4 (31-165)||(37727693-37727826)
chr4 (1-158)||(49306778-49306934)
chr4 (61-129)||(33310090-33310158)
chr4 (52-147)||(21178010-21178105)
chr4 (77-159)||(55602378-55602459)
chr4 (23-164)||(3927663-3927804)
chr4 (83-131)||(26420345-26420392)
chr4 (85-129)||(46637713-46637757)
[»] chr3 (57 HSPs)
chr3 (4-158)||(7758405-7758560)
chr3 (31-163)||(54540761-54540893)
chr3 (23-158)||(12700178-12700311)
chr3 (31-162)||(7267643-7267773)
chr3 (31-158)||(19984852-19984979)
chr3 (23-158)||(47614188-47614323)
chr3 (5-162)||(47610524-47610682)
chr3 (5-158)||(51469975-51470129)
chr3 (5-158)||(46719944-46720097)
chr3 (50-158)||(22776802-22776910)
chr3 (31-158)||(19986041-19986170)
chr3 (17-163)||(46721177-46721323)
chr3 (61-158)||(29931229-29931326)
chr3 (61-158)||(29980383-29980480)
chr3 (30-158)||(534502-534630)
chr3 (61-165)||(29932700-29932803)
chr3 (61-165)||(29981854-29981957)
chr3 (61-165)||(55191996-55192099)
chr3 (4-158)||(8456481-8456635)
chr3 (31-158)||(47609700-47609827)
chr3 (31-161)||(23770378-23770508)
chr3 (50-163)||(12703490-12703602)
chr3 (61-158)||(51037539-51037635)
chr3 (61-157)||(24516464-24516560)
chr3 (23-142)||(34019108-34019227)
chr3 (68-162)||(7268835-7268928)
chr3 (30-164)||(54539752-54539886)
chr3 (31-131)||(31645003-31645103)
chr3 (23-158)||(5029646-5029780)
chr3 (23-158)||(8875909-8876044)
chr3 (23-158)||(11671304-11671438)
chr3 (64-158)||(52840608-52840702)
chr3 (103-158)||(47615591-47615646)
chr3 (5-158)||(51470399-51470552)
chr3 (61-158)||(51038791-51038888)
chr3 (61-158)||(53616017-53616114)
chr3 (31-158)||(40426749-40426877)
chr3 (23-91)||(47615540-47615608)
chr3 (63-158)||(53901391-53901484)
chr3 (65-158)||(535787-535880)
chr3 (31-156)||(23769862-23769986)
chr3 (17-102)||(52105624-52105709)
chr3 (86-158)||(5001203-5001275)
chr3 (31-158)||(49216250-49216377)
chr3 (31-165)||(54986978-54987110)
chr3 (65-158)||(53614822-53614914)
chr3 (50-163)||(52104479-52104588)
chr3 (17-158)||(28262196-28262336)
chr3 (17-158)||(28263068-28263209)
chr3 (17-158)||(52276307-52276448)
chr3 (17-158)||(52281504-52281645)
chr3 (84-152)||(6170281-6170349)
chr3 (17-163)||(18442628-18442775)
chr3 (17-163)||(19487702-19487849)
chr3 (23-162)||(51347267-51347406)
chr3 (84-137)||(6249633-6249686)
chr3 (23-148)||(11670397-11670522)
[»] chr5 (40 HSPs)
chr5 (23-163)||(19752910-19753049)
chr5 (23-158)||(18486865-18487000)
chr5 (23-167)||(25523063-25523207)
chr5 (4-158)||(16650798-16650953)
chr5 (4-158)||(22940566-22940720)
chr5 (31-163)||(24332911-24333043)
chr5 (31-158)||(28538679-28538806)
chr5 (65-162)||(20216768-20216865)
chr5 (4-159)||(42195136-42195290)
chr5 (23-148)||(19754093-19754217)
chr5 (5-158)||(5778780-5778934)
chr5 (31-165)||(36486459-36486593)
chr5 (23-158)||(25056343-25056479)
chr5 (5-158)||(42196144-42196298)
chr5 (31-163)||(28539791-28539922)
chr5 (23-120)||(25524061-25524158)
chr5 (65-158)||(33160291-33160384)
chr5 (31-158)||(2186774-2186900)
chr5 (5-131)||(5730806-5730933)
chr5 (4-158)||(25055415-25055570)
chr5 (66-144)||(7311607-7311685)
chr5 (4-109)||(16650044-16650150)
chr5 (64-158)||(40255676-40255770)
chr5 (86-158)||(5730444-5730517)
chr5 (23-163)||(18485136-18485283)
chr5 (69-158)||(20214199-20214287)
chr5 (45-153)||(1015492-1015600)
chr5 (85-164)||(33158095-33158174)
chr5 (45-158)||(5777904-5778015)
chr5 (85-158)||(1796057-1796130)
chr5 (23-162)||(2686364-2686505)
chr5 (31-158)||(36485303-36485430)
chr5 (87-137)||(34893689-34893739)
chr5 (85-158)||(18154497-18154569)
chr5 (74-158)||(25524141-25524226)
chr5 (31-129)||(1797268-1797366)
chr5 (45-131)||(5962557-5962643)
chr5 (68-161)||(38834087-38834179)
chr5 (52-163)||(21835039-21835149)
chr5 (85-131)||(2685774-2685820)
[»] chr8 (52 HSPs)
chr8 (23-158)||(10006347-10006482)
chr8 (23-158)||(10007726-10007861)
chr8 (5-163)||(30335637-30335796)
chr8 (23-156)||(1824041-1824174)
chr8 (23-156)||(1858486-1858619)
chr8 (23-158)||(5513985-5514119)
chr8 (17-162)||(8389646-8389791)
chr8 (23-163)||(22221327-22221467)
chr8 (23-163)||(22227669-22227809)
chr8 (31-163)||(12353332-12353462)
chr8 (31-143)||(24123869-24123981)
chr8 (31-163)||(40471118-40471249)
chr8 (4-158)||(22220391-22220546)
chr8 (31-158)||(24122886-24123012)
chr8 (4-158)||(30336444-30336599)
chr8 (64-165)||(29968341-29968441)
chr8 (66-165)||(12351917-12352016)
chr8 (37-163)||(32207302-32207426)
chr8 (31-158)||(43661268-43661395)
chr8 (52-152)||(18978029-18978128)
chr8 (31-158)||(18979091-18979218)
chr8 (23-163)||(1823550-1823691)
chr8 (23-163)||(1857995-1858136)
chr8 (69-158)||(11287779-11287868)
chr8 (5-165)||(43661767-43661928)
chr8 (31-163)||(8388462-8388592)
chr8 (61-162)||(11282007-11282108)
chr8 (31-152)||(18970920-18971040)
chr8 (4-158)||(11283153-11283307)
chr8 (31-150)||(2379895-2380010)
chr8 (31-163)||(30570227-30570358)
chr8 (31-158)||(29043401-29043528)
chr8 (85-156)||(45114541-45114612)
chr8 (23-101)||(34625163-34625241)
chr8 (17-163)||(38980001-38980147)
chr8 (17-163)||(39011098-39011244)
chr8 (17-158)||(38974798-38974939)
chr8 (17-158)||(39005896-39006037)
chr8 (23-91)||(11456679-11456747)
chr8 (64-144)||(24488684-24488763)
chr8 (61-157)||(45112875-45112969)
chr8 (23-158)||(32968459-32968594)
chr8 (23-158)||(32973899-32974034)
chr8 (111-158)||(36249555-36249602)
chr8 (104-158)||(24483146-24483200)
chr8 (31-141)||(40469360-40469470)
chr8 (45-129)||(18488247-18488331)
chr8 (31-103)||(30568944-30569016)
chr8 (58-158)||(42982655-42982755)
chr8 (105-158)||(11456641-11456694)
chr8 (50-158)||(5514261-5514367)
chr8 (114-158)||(11288914-11288958)
[»] chr7 (35 HSPs)
chr7 (23-158)||(22630415-22630550)
chr7 (23-158)||(18371427-18371562)
chr7 (23-148)||(18372420-18372544)
chr7 (23-158)||(22629486-22629624)
chr7 (23-158)||(7501815-7501950)
chr7 (61-165)||(11662552-11662656)
chr7 (4-158)||(31659625-31659781)
chr7 (5-158)||(3227538-3227692)
chr7 (31-162)||(42886257-42886388)
chr7 (23-163)||(7500453-7500592)
chr7 (5-158)||(31949325-31949479)
chr7 (31-158)||(17781664-17781791)
chr7 (5-158)||(31949746-31949900)
chr7 (5-158)||(127340-127492)
chr7 (31-156)||(14999126-14999249)
chr7 (1-141)||(43899466-43899606)
chr7 (23-163)||(47369779-47369919)
chr7 (5-158)||(47525311-47525465)
chr7 (61-158)||(11658382-11658479)
chr7 (5-158)||(3227111-3227264)
chr7 (33-158)||(21505419-21505542)
chr7 (65-158)||(17782558-17782651)
chr7 (23-158)||(30439321-30439455)
chr7 (89-163)||(20163585-20163659)
chr7 (64-163)||(128605-128704)
chr7 (87-154)||(47524532-47524599)
chr7 (65-158)||(48934908-48935001)
chr7 (31-158)||(769416-769543)
chr7 (34-93)||(14998048-14998107)
chr7 (87-158)||(34174010-34174080)
chr7 (66-131)||(34351522-34351587)
chr7 (23-158)||(46482600-46482735)
chr7 (75-163)||(31661024-31661112)
chr7 (111-163)||(5111440-5111492)
chr7 (73-165)||(34352799-34352891)
[»] chr1 (49 HSPs)
chr1 (4-158)||(11437142-11437297)
chr1 (4-158)||(24422803-24422958)
chr1 (28-162)||(43058785-43058918)
chr1 (23-164)||(24426038-24426179)
chr1 (17-158)||(51684369-51684510)
chr1 (5-163)||(11436040-11436199)
chr1 (23-165)||(37526841-37526982)
chr1 (31-163)||(39153087-39153219)
chr1 (23-162)||(50680331-50680469)
chr1 (23-163)||(36612851-36612990)
chr1 (31-158)||(45148584-45148710)
chr1 (6-164)||(52274965-52275124)
chr1 (5-162)||(52828014-52828172)
chr1 (23-158)||(39222436-39222572)
chr1 (31-162)||(45149941-45150072)
chr1 (50-158)||(23980456-23980564)
chr1 (31-163)||(45157180-45157311)
chr1 (34-158)||(51685739-51685863)
chr1 (31-163)||(52827345-52827477)
chr1 (23-158)||(36613867-36614002)
chr1 (31-162)||(39151930-39152061)
chr1 (31-158)||(39699738-39699864)
chr1 (23-163)||(35594215-35594353)
chr1 (5-158)||(41364832-41364985)
chr1 (1-162)||(52276103-52276265)
chr1 (61-158)||(35067003-35067100)
chr1 (43-163)||(33088600-33088720)
chr1 (31-163)||(44404440-44404572)
chr1 (23-158)||(43059969-43060104)
chr1 (4-158)||(35595135-35595291)
chr1 (17-163)||(41366088-41366233)
chr1 (85-158)||(14999288-14999360)
chr1 (31-163)||(39698561-39698692)
chr1 (31-163)||(43378684-43378815)
chr1 (31-159)||(45156051-45156179)
chr1 (88-158)||(50681632-50681702)
chr1 (51-147)||(7675450-7675546)
chr1 (85-158)||(7674531-7674602)
chr1 (23-131)||(25652744-25652852)
chr1 (31-162)||(7983049-7983179)
chr1 (31-161)||(40384724-40384855)
chr1 (85-158)||(11190388-11190461)
chr1 (50-131)||(16290124-16290205)
chr1 (31-126)||(44411937-44412032)
chr1 (66-156)||(46066530-46066617)
chr1 (17-159)||(30249447-30249589)
chr1 (88-163)||(14999983-15000058)
chr1 (115-163)||(39221356-39221405)
chr1 (30-71)||(39221404-39221445)
[»] scaffold0019 (2 HSPs)
scaffold0019 (5-158)||(61403-61557)
scaffold0019 (1-158)||(60093-60251)
[»] chr6 (31 HSPs)
chr6 (23-158)||(7316257-7316392)
chr6 (31-161)||(1829574-1829704)
chr6 (23-158)||(7314883-7315017)
chr6 (5-158)||(8659268-8659422)
chr6 (23-158)||(27322031-27322165)
chr6 (85-158)||(16704522-16704595)
chr6 (5-163)||(3721610-3721769)
chr6 (52-158)||(10784595-10784702)
chr6 (31-158)||(27437831-27437958)
chr6 (5-162)||(34834523-34834681)
chr6 (45-158)||(8821876-8821989)
chr6 (68-155)||(14822366-14822453)
chr6 (17-158)||(6842240-6842381)
chr6 (65-158)||(8822798-8822891)
chr6 (17-163)||(8660161-8660306)
chr6 (61-163)||(29473075-29473177)
chr6 (31-160)||(5658757-5658886)
chr6 (62-158)||(16703573-16703666)
chr6 (52-148)||(10785905-10786000)
chr6 (31-158)||(14823546-14823674)
chr6 (23-142)||(17496816-17496936)
chr6 (31-137)||(26575025-26575131)
chr6 (8-156)||(6840199-6840345)
chr6 (86-158)||(3722533-3722605)
chr6 (52-163)||(3333018-3333129)
chr6 (61-127)||(12350832-12350897)
chr6 (61-158)||(27318318-27318416)
chr6 (23-101)||(3333488-3333566)
chr6 (113-158)||(26717137-26717182)
chr6 (31-158)||(26574622-26574748)
chr6 (31-141)||(26949156-26949263)
[»] scaffold0302 (2 HSPs)
scaffold0302 (61-158)||(17473-17570)
scaffold0302 (31-158)||(18747-18874)
[»] scaffold0320 (1 HSPs)
scaffold0320 (23-158)||(19491-19626)
[»] scaffold0294 (2 HSPs)
scaffold0294 (19-158)||(5397-5536)
scaffold0294 (19-158)||(4445-4584)
[»] scaffold2034 (2 HSPs)
scaffold2034 (52-158)||(236-342)
scaffold2034 (45-140)||(963-1058)
[»] scaffold1303 (1 HSPs)
scaffold1303 (5-158)||(1442-1596)
[»] scaffold0003 (1 HSPs)
scaffold0003 (31-158)||(49404-49531)
[»] scaffold0586 (2 HSPs)
scaffold0586 (45-162)||(6342-6459)
scaffold0586 (28-158)||(8995-9123)
[»] scaffold0632 (1 HSPs)
scaffold0632 (52-158)||(3300-3405)
[»] scaffold0093 (2 HSPs)
scaffold0093 (67-158)||(2472-2562)
scaffold0093 (67-158)||(7095-7185)
[»] scaffold0045 (2 HSPs)
scaffold0045 (85-158)||(49109-49182)
scaffold0045 (31-136)||(48334-48436)
[»] scaffold0321 (1 HSPs)
scaffold0321 (58-158)||(18731-18831)
[»] scaffold0059 (2 HSPs)
scaffold0059 (66-137)||(3699-3770)
scaffold0059 (85-158)||(4755-4827)
[»] scaffold0227 (1 HSPs)
scaffold0227 (17-158)||(76-217)
[»] scaffold0112 (1 HSPs)
scaffold0112 (64-129)||(37179-37244)
[»] scaffold0186 (2 HSPs)
scaffold0186 (88-158)||(23084-23152)
scaffold0186 (104-158)||(23934-23988)
[»] scaffold0049 (3 HSPs)
scaffold0049 (52-163)||(7407-7518)
scaffold0049 (23-98)||(7882-7957)
scaffold0049 (58-158)||(7541-7640)


Alignment Details
Target: chr2 (Bit Score: 114; Significance: 6e-58; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 18904527 - 18904370
Alignment:
Q  1 acgcgtggcatgccactcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttg 100  Q
    |||||||||||||||||||||||||||||||| ||||||| || |||| |||||||||||||||||||||||||||||||  | ||||||||||||||||    
T  18904527 acgcgtggcatgccactcagctttgactaagttaaaattggccaaaaggaccaaagatgtaaaggggctaattcttagggaaccaaaattgtagtttttg 18904428  T
Q  101 tacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| || |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18904427 tacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcacttta 18904370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 38840497 - 38840591
Alignment:
Q  64 ggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||    
T  38840497 ggggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 38840591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 22848329 - 22848188
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||| | |||| ||||||| || ||||||||||| |||||||| || |||||||||||||||||| ||||||  |||||||||||    
T  22848329 ttgaataagtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttagggagccaaaattgtagtttttgtatttaggggaccaaaattgca 22848230  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctta 164  Q
    ||||||||| ||||| ||||| |||||||||||||| |||||    
T  22848229 agtttttgaaagttaggggggtaaaagtgcactttagcctta 22848188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 7899886 - 7899980
Alignment:
Q  64 ggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  7899886 ggggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 7899980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 36449878 - 36449781
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||||||||| |||||  ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36449878 aaagggcctaattcttgggggggcaaaattgtagtttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 36449781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11258751 - 11258914
Alignment:
Q  1 acgcgtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagttttt 99  Q
    |||||||||||||||  || || ||||||| ||||||||||||| |||| | ||||  || || |||||||| ||||||||| |||||||||||||||||    
T  11258751 acgcgtggcatgccatgcaagcgttgactaggtcaaaattgaccaaaaggatcaaatctgcaatggggctaaatcttaggggactaaaattgtagttttt 11258850  T
Q  100 gtacttagggagccaaaattgcaagtttttgatagtta-aggggggaaaagtgcactttaacctt 163  Q
    |||||||||| ||||||||||||||||||||| ||||| || |||||||| ||||||||| ||||    
T  11258851 gtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaa-tgcactttagcctt 11258914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 165
Target Start/End: Original strand, 22587929 - 22588058
Alignment:
Q  35 aaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatag 134  Q
    |||||| || |||| |||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||    
T  22587929 aaattggccaaaaggaccaaagatgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacataggg-gccaaaattgcaagtttttgaaag 22588027  T
Q  135 ttaaggggggaaaagtgcactttaaccttaa 165  Q
    ||| | |||||||| ||||||||| ||||||    
T  22588028 ttatgaggggaaaaatgcactttagccttaa 22588058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 23869527 - 23869632
Alignment:
Q  52 caaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtg 151  Q
    |||||||| ||||||||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| | ||||||||| |||||||||    
T  23869527 caaagatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtggaaaagtg 23869625  T
Q  152 cacttta 158  Q
    |||||||    
T  23869626 cacttta 23869632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 18299517 - 18299376
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||| ||||||  ||||||||||||| |||| | |||||||| ||| ||||||| || |||||||| ||||||||||||||| ||||||||  ||||||    
T  18299517 tcagcattgacttggtcaaaattgaccaaaaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaa 18299418  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||| |||||||||| ||||| ||| ||||||||||||||||    
T  18299417 attgaaagtttttgaaagttacgggtggaaaagtgcacttta 18299376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 13030427 - 13030295
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||  |||||||||| ||| | ||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||| ||    
T  13030427 ttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaagagctaaatcttagggggcaaaaattgtaatttttgtacttaggg-gccaaaattaca 13030329  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||||  |||||||||||||||||||    
T  13030328 agtttttgaaagtta--gggggaaaagtgcacttta 13030295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 18905951 - 18906085
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||| | |||  |||||||||| ||| | ||||| ||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  18905951 ttgaataagtcaaaattgatcaaaaagaccaaagatgcaaatgagctaaatcttagggg-ctaaaattgtagtttttgtacttagggggctaaaattgca 18906049  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||||   ||||||||||||||||||    
T  18906050 agtttttgaaagttagaaggggaaaagtgcacttta 18906085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 36450891 - 36451022
Alignment:
Q  30 agtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    ||||||||||| || |||| | ||||  || ||||| |||||||||| ||||||  |||||||||||| |||||||||||  ||||||||||||||||||    
T  36450891 agtcaaaattggccaaaaggatcaaaattgcaaaggagctaattcttggggggccgaaattgtagtttctgtacttaggggaccaaaattgcaagttttt 36450990  T
Q  130 gatagttaaggggggaaaagtgcactttaacct 162  Q
    || |||||| |||||||||||||||||||||||    
T  36450991 gaaagttaa-gggggaaaagtgcactttaacct 36451022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 162
Target Start/End: Complemental strand, 7898788 - 7898690
Alignment:
Q  64 ggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    |||||||| ||||||||||| ||||||||||||| | ||||||||  || |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  7898788 ggggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaagtttttgaaagttaaggggagaaaagtgcactttaacct 7898690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 18797385 - 18797249
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| |||||||||||| |  |||| |||||||||| ||||||||||| | ||||||||  ||||||||||||||  |||||| || | ||||||||||    
T  18797385 ttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgca 18797286  T
Q  123 agtttttgatagttaagggg-ggaaaagtgcacttta 158  Q
    ||||||||| ||||| |||| ||||||||||||||||    
T  18797285 agtttttgaaagttagggggtggaaaagtgcacttta 18797249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 28618052 - 28617946
Alignment:
Q  30 agtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    ||||||||| |||| ||| ||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||| ||| |||||||||||||| ||||    
T  28618052 agtcaaaatagaccaaaataaccaaagatgcaaaggggctaaatcttagggggc-aaaattgaagtttttgtacttggggggccaaaattgcaagatttt 28617954  T
Q  130 gatagtta 137  Q
    || |||||    
T  28617953 gaaagtta 28617946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 38839339 - 38839245
Alignment:
Q  64 ggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||| || |||||||||||||||||| | ||||||||| |||| |||||||||    
T  38839339 ggggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcacttta 38839245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 163
Target Start/End: Original strand, 802563 - 802693
Alignment:
Q  32 tcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 131  Q
    |||||||||||| |||| |||||| ||| |||||||  || |||||| |||  |||||||||||||||||||  |||| |||||||||||||||||||||    
T  802563 tcaaaattgacctaaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttga 802662  T
Q  132 tagttaaggggggaaaagtgcactttaacctt 163  Q
     | || ||||||||||||| ||||||| ||||    
T  802663 aactt-aggggggaaaagtacactttagcctt 802693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 158
Target Start/End: Original strand, 18300697 - 18300820
Alignment:
Q  32 tcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 131  Q
    ||||||||| || |||| |||||||||| ||||||||||| |  |||||| | ||||||||||||||||||||||||| | ||||||||||||||| |||    
T  18300697 tcaaaattgtccaaaaggaccaaagatgcaaaggggctaaattataggggtc-aaaattgtagtttttgtacttagggggtcaaaattgcaagtttatga 18300795  T
Q  132 tagttaaggggggaaaagtgcacttta 158  Q
     |||||  |||||||||||||| ||||    
T  18300796 aagtta--gggggaaaagtgcaattta 18300820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 158
Target Start/End: Original strand, 41879227 - 41879310
Alignment:
Q  75 ttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||| ||||||| ||||||    
T  41879227 ttagggggttaaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtacttta 41879310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 11938730 - 11938886
Alignment:
Q  1 acgcgtggcatgccactcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttg 100  Q
    |||||| |||||||||||||  |||||| ||||||||||| |  |||  | ||||  || ||| | ||||||||||||||||  |||||| || ||||||    
T  11938730 acgcgtcgcatgccactcagtattgactgagtcaaaattggcaaaaatgatcaaaattgcaaaagagctaattcttaggggggcaaaattata-tttttg 11938828  T
Q  101 tacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||   |||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  11938829 tacttaggagaccaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttta 11938886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 24475385 - 24475248
Alignment:
Q  1 acgcgtggcatg-ccactcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagttttt 99  Q
    |||||||| ||| ||| ||||| ||||||  ||||||||||||| |||| |||||||||| ||| | ||||| |  |||||||| |||||||||||||||    
T  24475385 acgcgtggaatgtccaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattatagggggccaaaattgtagttttt 24475286  T
Q  100 gtacttagggagccaaaattgcaagtttttgatagtta 137  Q
     ||||||||| || |||||| ||||||||||| |||||    
T  24475285 atacttagggggcaaaaattacaagtttttgaaagtta 24475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 1034475 - 1034567
Alignment:
Q  66 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||||||||||   ||||||| ||||| |||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  1034475 ggctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcacttta 1034567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 11996851 - 11996739
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||| ||||||  ||||||||||||| |||| |||||||||||||||||| ||| |||||| |  ||||||||||||||||||||| ||||| | ||||    
T  11996851 tcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgtaaaggggttaaatcttagagaactaaaattgtagtttttgtacatagggggtcaaa 11996752  T
Q  117 attgcaagttttt 129  Q
    || |||| |||||    
T  11996751 atcgcaacttttt 11996739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 41878191 - 41878095
Alignment:
Q  64 ggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca---agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||| ||||| ||||| ||||||||||||| ||||||||||| ||||||||||||   ||||||||| |||||||||||| |||||||||||||    
T  41878191 ggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagtttttgaaagttaagggggg-aaagtgcacttta 41878095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 11257779 - 11257620
Alignment:
Q  4 cgtggcatgccactcag-ctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    ||||||||||||| ||| | ||||||| ||||||||||| | |||| | ||||  || || |||||||| ||||||| ||| ||||||||||||||| ||    
T  11257779 cgtggcatgccacgcaggcgttgactatgtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggccaaaattgtagtttttata 11257680  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||||||    |||||||||||||||||| |||||  || | |||||||||||||| ||||    
T  11257679 cttaggg-tttaaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagcctt 11257620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 18869033 - 18868927
Alignment:
Q  50 accaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaag 149  Q
    |||||||||||||| | |||||| |||||||  | |||||||||||||||||| |||||  ||||||||||||||||||||| ||||| ||| |||||||    
T  18869033 accaaagatgtaaatgagctaat-cttagggatc-aaaattgtagtttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaag 18868936  T
Q  150 tgcacttta 158  Q
    | |||||||    
T  18868935 tacacttta 18868927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 13570549 - 13570660
Alignment:
Q  52 caaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtg 151  Q
    ||||| ||||||||| ||||||||| |||| | |||||| ||||||||||||||| ||  | |||||||||||||||||| ||||| |||  ||||| ||    
T  13570549 caaagttgtaaagggactaattcttgggggaccaaaattatagtttttgtacttaagggactaaaattgcaagtttttgaaagttatgggtagaaaaatg 13570648  T
Q  152 cactttaacctt 163  Q
    ||||||| ||||    
T  13570649 cactttagcctt 13570660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 26544278 - 26544152
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||| | |||| |||||| ||| ||||| ||||| ||||||| |||||||| ||||||||||||||||| ||| ||||||||| || |||||     
T  26544278 gtcaaaattgatcaaaaggaccaaatatgcaaaggtgctaaatcttaggaggctaaaactgtagtttttgtactta-ggaaccaaaattgtaaattttta 26544180  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | | ||| |||  |||||||||||||||    
T  26544179 aaaattaggggtagaaaagtgcacttta 26544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 13568048 - 13567970
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| | |||   |||||||||| ||||||||||||    
T  13568048 aaaattgtagtttttgtatttagggggccaaaattgcaagtttttgaaacttagaaggggaaaagtacactttaacctt 13567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 22587630 - 22587525
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| || |||| |||||||||| |||| |||||| ||||||||||| ||||||||||||||||||  |||||  ||||||||| || ||||||    
T  22587630 gtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttagggggccaaaattgtagtttttgta-ataggggaccaaaattggaactttttg 22587532  T
Q  131 atagtta 137  Q
    | |||||    
T  22587531 aaagtta 22587525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 810753 - 810852
Alignment:
Q  32 tcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 131  Q
    |||||||||| | |||| |||||| ||| |||||||  || |||||| |||  |||||||||||||||||||  |||| |||||||||||||||||||||    
T  810753 tcaaaattgatctaaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagtttttga 810852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 173
Target Start/End: Original strand, 8535619 - 8535767
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| ||||||||||||||| |||| || |    || ||||||||||||||||||||||  ||||||||||||| | ||||||  |   ||||||| ||    
T  8535619 ttgaccaagtcaaaattgacctaaaggactactattgcaaaggggctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaaattaca 8535718  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaaccttaacattacta 173  Q
    ||||||| | |||||  || ||||||||| ||||||||||| | |||||||    
T  8535719 agtttttaaaagtta--ggaggaaaagtgtactttaaccttcaaattacta 8535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 26545492 - 26545619
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||| | |||  |||||||||| ||||||||||| |||||| |||  |||||| || |||||||| ||| || | ||||||||||| ||||||    
T  26545492 gtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaaatttttg 26545591  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | ||| | |  || ||||||||||||||    
T  26545592 aaagtcatgaaggaaaaagtgcacttta 26545619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 32739706 - 32739647
Alignment:
Q  78 gggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 137  Q
    |||||| ||||||||||||||||||| || || ||||||||||||||||||||| |||||    
T  32739706 gggggccaaaattgtagtttttgtacataaggggccaaaattgcaagtttttgaaagtta 32739647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 1033320 - 1033214
Alignment:
Q  50 accaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaag 149  Q
    ||||||| || || |||||||| |||||| ||| | ||||| || |||| ||| |||||| ||||||||||||||||||| | |||| ||||||||||||    
T  1033320 accaaagttgcaatggggctaaatcttagaggggttaaattataattttggtatttaggg-gccaaaattgcaagtttttaaaagtt-aggggggaaaag 1033223  T
Q  150 tgcacttta 158  Q
    | |||||||    
T  1033222 tacacttta 1033214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 137
Target Start/End: Original strand, 18869125 - 18869241
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaag-gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattg- 120  Q
    |||| |||||||||||||| | |||  |||||||||| |||  ||||||| |||||||||   |||||||||||||||||||||||   ||||||||||     
T  18869125 ttgaataagtcaaaattgatcaaaaagaccaaagatgcaaaatgggctaaatcttaggggataaaaattgtagtttttgtacttagaaggccaaaattgc 18869224  T
Q  121 caagtttttgatagtta 137  Q
    ||| ||||||| |||||    
T  18869225 caaatttttgaaagtta 18869241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 1093147 - 1093234
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaa 148  Q
    ||||||||||| |||||| ||| |||||||||| ||||||||  ||||||  || ||||||||  |||| | ||||||||||||||||    
T  1093147 aaaggggctaaatcttagcgggttaaaattgtaatttttgtatatagggaatcacaattgcaacattttaaaagttaaggggggaaaa 1093234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 24476869 - 24476937
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcact 155  Q
    |||||||||||||||||||||||||  |||||||| ||||||||| | ||||  ||||| |||||||||||    
T  24476869 aaaattgtagtttttgtacttaggggaccaaaattacaagtttttaaaagtt--gggggaaaaagtgcact 24476937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 22067745 - 22067823
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgt 101  Q
    ||||||||||||||||||||| |||| | ||||| ||  ||| || ||| |  ||||||||||||||||||||||||||    
T  22067745 ttgactaagtcaaaattgaccaaaaggatcaaagttgcgaagagggtaaattatagggggctaaaattgtagtttttgt 22067823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 16446230 - 16446157
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||||||||||||| ||| |  |  |||||||||||||||||| |||||||||  ||||| |||||||||    
T  16446230 aaaattgtagtttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcacttta 16446157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 21837298 - 21837356
Alignment:
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||| ||||||||||||||||||||| |||||  |||| |||||||||||||| ||||    
T  21837298 cttagggggccaaaattgcaagtttttgaaagtta--ggggaaaaagtgcactttagcctt 21837356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 5819741 - 5819824
Alignment:
Q  88 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaacattact 172  Q
    |||||||||||||| | || || |||||||| |||| ||||||| | |||||||||| ||||||| | ||| ||||||| |||||    
T  5819741 attgtagtttttgttcatatggggccaaaatcgcaactttttgaaacttaagggggg-aaagtgcgccttagccttaactttact 5819824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 1290142 - 1290296
Alignment:
Q  5 gtggcatgccactcag-ctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    ||||||||||||| || | ||||||  ||||||||||||| |||| |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  1290142 gtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtac 1290241  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||| | |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  1290242 ttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcacttta 1290296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 1963296 - 1963199
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  1963296 aaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcacttta 1963199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 12129761 - 12129625
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||| | |||  |||||||||| ||| ||||||| ||||| ||||  |||||||||||||||||||||| || ||||||||||||    
T  12129761 ttgaataagtcaaaattgatcaaaatgaccaaagatgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgca 12129662  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaa 159  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  12129661 agtttttgaaagttaagaggggaaaagtgcactttaa 12129625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 10471332 - 10471486
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||| || || |||||||| ||||||||||   ||||||| ||||| ||||    
T  10471332 gtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 10471431  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10471432 ttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 10471486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 49307985 - 49308124
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||| ||||||  ||||||||||||| |||| ||||||||||   |||||| || || |||||||| ||||||||||||||||||||||||| ||||||    
T  49307985 tcagcattgacttggtcaaaattgacccaaaggaccaaagatgcgcaggggcaaaatcatagggggc-aaaattgtagtttttgtacttagggggccaaa 49308083  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  49308084 attgcaagtttttgaaagtt-aggggggaaaagtgcacttta 49308124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 8758844 - 8758947
Alignment:
Q  67 gctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaac 166  Q
    ||||| ||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||     
T  8758844 gctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcattttaaccttaaa 8758943  T
Q  167 atta 170  Q
    ||||    
T  8758944 atta 8758947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 19750534 - 19750672
Alignment:
Q  19 agctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaat 118  Q
    ||||||||||  ||||||| ||||| |||| | ||||  || || |||||||| |||||||||| |||||||||||||||||||||||||| ||||||||    
T  19750534 agctttgacttggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaat 19750633  T
Q  119 tgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||| | |||| |||||||||||||||||||||    
T  19750634 tgcaagtttttaaaagtt-aggggggaaaagtgcacttta 19750672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 19789272 - 19789134
Alignment:
Q  19 agctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaat 118  Q
    ||||||||||  ||||||| ||||| |||| | ||||  || || |||||||| |||||||||| |||||||||||||||||||||||||| ||||||||    
T  19789272 agctttgacttggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaat 19789173  T
Q  119 tgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||| | |||| |||||||||||||||||||||    
T  19789172 tgcaagtttttaaaagtt-aggggggaaaagtgcacttta 19789134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 1835065 - 1835200
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| |||||||||||| |  |||| |||||||||| ||||||||||| ||||||||||  ||||||||||||||  ||||||||| | ||||||||||    
T  1835065 ttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgca 1835164  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| ||||| ||  ||||||||||||||||    
T  1835165 agtttttgaaagttagggatggaaaagtgcacttta 1835200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 160
Target Start/End: Complemental strand, 8155875 - 8155739
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtactta-gggagccaaaattgc 121  Q
    |||| ||||||||| |||||| |||  || ||||||| |||| |||||| ||||||||||| |||||||||||||||| ||||| |||||| ||||||||    
T  8155875 ttgaataagtcaaagttgaccaaaatgactaaagatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttaggggagctaaaattgc 8155776  T
Q  122 aagtttttgatagttaaggggggaaaagtgcactttaac 160  Q
    |||||||||| |||||  |||||||||||||||||||||    
T  8155775 aagtttttgaaagtta--gggggaaaagtgcactttaac 8155739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 17388174 - 17388308
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| ||||||||||||||| |||| || |    ||||||||||||||||||| |||||| ||||||||||||| |||||||| ||  |||||||||||    
T  17388174 ttgaccaagtcaaaattgacctaaaggactactattgtaaaggggctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgca 17388273  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||| |||||||||||||||||||||    
T  17388274 agtttttgaaagtt-aggggggaaaagtgcacttta 17388308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 25685766 - 25685920
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||| || || |||||||| ||||||||||   ||||||| ||||| ||||    
T  25685766 gtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtctaaattgtggttttggtac 25685865  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  25685866 ttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 25685920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 10470703 - 10470542
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||  ||||||||||| | |||| ||||||| || || |||||||| ||||||||||   |||||||  |||| ||||    
T  10470703 gtggcatgccatatcagcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtgattttggtac 10470604  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 165  Q
    |||| | | ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  10470603 ttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccttaa 10470542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 1289255 - 1289096
Alignment:
Q  4 cgtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    |||||||||||||| | || ||||||  ||||||||||||| |||| |||||||||| || |||| ||| ||||| | ||||||||||||||||||| ||    
T  1289255 cgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaagggggttaaatcttaagaggctaaaattgtagtttttata 1289156  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    ||||| |   ||||||| ||| | ||||| |||||||||||||||||| |||||||||||    
T  1289155 cttagaggatcaaaattacaaatatttgaaagttaaggggggaaaagttcactttaacct 1289096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 10447123 - 10447009
Alignment:
Q  45 aaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaag-gggg 143  Q
    |||| |||||||||| ||||||||||| |||||||||| ||||||||| |||||||||| ||||| || |||||||||| ||||||| | ||||| ||||    
T  10447123 aaaggaccaaagatgcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaaaattgcaactttttgaaacttaagagggg 10447024  T
Q  144 gaaaagtgcacttta 158  Q
    |||||||||||||||    
T  10447023 gaaaagtgcacttta 10447009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 25685091 - 25684937
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||  ||||||||||| | |||| ||||||| || || |||||||| ||||||||||   ||||||| ||||| ||||    
T  25685091 gtggcatgccaaatcagcgttgacttggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 25684992  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||| | | ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  25684991 ttagagggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 25684937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 31599919 - 31599794
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| |  |||| | ||||| || ||||||||||| ||||||||| | ||||||||||||||||||||||||| | |||||||||||||||||     
T  31599919 gtcaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 31599820  T
Q  131 atagttaaggggggaaaagtgcactt 156  Q
    | ||||| ||||| ||||||||||||    
T  31599819 aaagttaggggggaaaaagtgcactt 31599794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 1834250 - 1834122
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttaggggg-ctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    ||||||||||||| |||| |||||||||| ||| ||||||| |||||||||| | ||||||||||||||| ||| ||||| | |||||||| ||||||||    
T  1834250 gtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttt 1834151  T
Q  130 gatagttaaggggggaaaagtgcacttta 158  Q
     | |||||  |||||||||||||||||||    
T  1834150 taaagttagagggggaaaagtgcacttta 1834122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 17383130 - 17382996
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| ||||||||||||||| |||| || |    || ||||||| |||||||| |||||| |||||||||||||||||||||| ||  |||||||||||    
T  17383130 ttgaccaagtcaaaattgacctaaaggactactattgcaaaggggataattcttggggggccaaaattgtagtttttgtacttaagggaccaaaattgca 17383031  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||| ||||| |||||||||||||||    
T  17383030 agtttttgaaagtt-aggggagaaaagtgcacttta 17382996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 66 - 159
Target Start/End: Original strand, 35935539 - 35935632
Alignment:
Q  66 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 159  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||| || |||||||||| ||||| | |||||||||||| ||||||||||||||    
T  35935539 ggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcactttaa 35935632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 13386173 - 13386017
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggcta-aaattgtagtttttgta 102  Q
    |||||||||||  ||||| ||||||| ||||||||||| | |||| ||||||| || || | |||||| ||||||||||  | ||||||| ||||| |||    
T  13386173 gtggcatgccatatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatgaggctaaatcttagggggggataaattgtggttttggta 13386074  T
Q  103 cttagggagccaaaattgcaagt-ttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||||||||||||| |||||| |||||  |||||||||||||||||||    
T  13386073 cttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcacttta 13386017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 31600956 - 31601083
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||  |||| | ||||| || ||| ||||||| ||||| ||||  ||||||||||||||||||||||||| | |||||||||||||||||     
T  31600956 gtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 31601055  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | |||||  |||| ||||||||||||||    
T  31601056 aaagttagaggggaaaaagtgcacttta 31601083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 52491578 - 52491705
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |  |||| || || |||||||| | ||||||||| ||||||||||||| |||| |||| |  |||||||||||||||||||    
T  52491578 gtcaaaattgaccaaaaggattaaagttgcaatggggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagtttttg 52491677  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | ||||||||| |||||||| |||||||    
T  52491678 aaagttaagggtggaaaagtacacttta 52491705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 5526070 - 5526223
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||  || || |||||||| ||||||||||   ||||||| |||||  |||    
T  5526070 gtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttaggggggctaaattgtggttttgttac 5526169  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||||||||||||||||||||| |||| || ||||||||||||||||||    
T  5526170 ttagggggccaaaattgcaagtttttgaaagtt-agaggggaaaagtgcacttta 5526223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 48780364 - 48780251
Alignment:
Q  45 aaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg 144  Q
    |||| ||||||| || || |||||||| ||||||||||   ||||||| ||||| |||||||||| | ||||||||||||||||| | ||||| ||||||    
T  48780364 aaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttaaaagttaggggggg 48780265  T
Q  145 aaaagtgcacttta 158  Q
    ||||||||||||||    
T  48780264 aaaagtgcacttta 48780251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 5525516 - 5525358
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||  ||||||||||  | |||| ||||||| || || |||||||| ||||||||||   ||||||| ||||| ||||    
T  5525516 gtggcatgccaaatcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 5525417  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||||| | ||||||||||||||||||| |||| ||||||||||| || |||||| ||||    
T  5525416 ttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtactttagcctt 5525358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 10448231 - 10448358
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| || |||| |||||||||| ||||||||||  |||||| |||| ||||||||||||||||||| ||||| || ||||| |||| ||||||    
T  10448231 gtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagagggccaaaattgtagtttttgtacatagggggctaaaatcgcaactttttg 10448330  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | | ||| ||| ||  ||||||||||||    
T  10448331 aaacttaggggaggggaagtgcacttta 10448358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 13509303 - 13509456
Alignment:
Q  5 gtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||| || || ||||||  |||||||||| || |||| | ||||| || ||||||||||| |||||||||   ||||||||||||||  |||    
T  13509303 gtggcatgccacacatgcgttgacttggtcaaaattggccaaaaggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatac 13509402  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || ||| ||||||||||||| ||||| | |||| ||||||||||||| |||||||    
T  13509403 ttggggggccaaaattgcaattttttaaaagtt-aggggggaaaagtacacttta 13509456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 1964442 - 1964539
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||||||| ||| | ||||||||||||||||| | ||||| |||||||||| || ||||| | ||||||||| ||||||||||||||||    
T  1964442 aaaggggataattcttaagggaccaaaattgtagtttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcacttta 1964539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 21539065 - 21539174
Alignment:
Q  54 aagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgca 153  Q
    |||||| ||||| ||||| ||||||||||  |||||||||||||||  |||||||  ||||||||||||||||||| | | ||||||| |||||||||      
T  21539065 aagatgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaattaagggtggaaaagtgtg 21539164  T
Q  154 ctttaacctt 163  Q
    ||||||||||    
T  21539165 ctttaacctt 21539174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 26421627 - 26421719
Alignment:
Q  65 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||| ||||  ||||||||||||||||||||||||  | ||||||||||||||||||| |||| || ||||||||||||||||||    
T  26421627 gggctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcacttta 26421719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 13386476 - 13386636
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||  ||||||||||  | |||| ||||||| || || |||||||  ||||||||||   ||||||| ||||| ||||    
T  13386476 gtggcatgccaaatcagcgttgacttggtcaaaattggtcaaaaggaccaaagttgcaatggggctagatcttaggggggctaaattgtggttttggtac 13386575  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaagggggg-aaaagtgcactttaacctt 163  Q
    ||| || | ||||||||||||||||||| ||||| |||||| |||||||||||||| ||||    
T  13386576 ttatggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcctt 13386636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 35934472 - 35934347
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| ||||||  |||| || || |||||||| ||||| ||||| |||||| || ||| | |||||||||  |||||||| ||||||||||    
T  35934472 gtcaaaattgaccaaaagaattaaagttgcaatggggctaaatcttaaggggccaaaattataatttctttacttaggggaccaaaattacaagtttttg 35934373  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | |||||  |||||||||||||||||||    
T  35934372 aaagtta--gggggaaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 50909643 - 50909771
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggct-aaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    ||||||||||| | |||| |||||||||| ||||||||||| ||||| |||| | ||||||||||||||| ||| ||||||| |||||| |||| |||||    
T  50909643 gtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaacttttt 50909742  T
Q  130 gatagttaaggggggaaaagtgcacttta 158  Q
     | | ||| || || ||||||||||||||    
T  50909743 aaaacttagggtggaaaaagtgcacttta 50909771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 8757804 - 8757678
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |  |||  || || |||||||| ||||| ||| | ||||||||||||| ||||||||||| || ||||||| |||||||||    
T  8757804 gtcaaaattgaccaaaaggattaaaattgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaagtttttg 8757705  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | |||||| |||| ||||||||||||||    
T  8757704 aaagttaa-ggggaaaaagtgcacttta 8757678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 48781036 - 48781148
Alignment:
Q  50 accaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaag 149  Q
    ||||||| || || |||||||| | ||||||||   ||||||| ||||| ||||||||||| |||||||||||| ||||||| |||||  ||||||||||    
T  48781036 accaaagttgcaatggggctaaattttaggggggctaaattgtggttttagtacttaggga-ccaaaattgcaaatttttgaaagttagagggggaaaag 48781134  T
Q  150 tgcactttaacctt 163  Q
    ||||||||| ||||    
T  48781135 tgcactttagcctt 48781148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 3928821 - 3928961
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| |||||||||||| |  |||| ||  || ||| |||||||||||  | ||| |||| |||||||| |||||  ||| ||||| |||||||| |||    
T  3928821 ttgaccaagtcaaaattgcctaaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatagggggccaaaatcgca 3928920  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |  |||||| ||||| |||||||||||||||||||| ||||    
T  3928921 acgttttgaaagttagggggggaaaagtgcactttagcctt 3928961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 14869026 - 14868888
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||||| ||||||||| || | |||| || ||| | | || |||||||||||||||||||  ||| |||| |||||  ||||||| | ||||||||||||    
T  14869026 ttgactgagtcaaaatagagcaaaaggacgaaataagcaatggggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgca 14868928  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    || |||||| || || |||||||||||||||||||| ||||    
T  14868927 agattttgaaagata-ggggggaaaagtgcactttagcctt 14868888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 14876908 - 14877046
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||||| ||||||||| || | |||| || ||| | | || |||||||||||||||||||  ||| |||| |||||  ||||||| | ||||||||||||    
T  14876908 ttgactgagtcaaaatagagcaaaaggacgaaataagcaatggggctaattcttagggggggaaa-ttgtggttttgatacttagcgggccaaaattgca 14877006  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    || |||||| || | ||||||||||||||||||||| ||||    
T  14877007 agattttgaaagat-aggggggaaaagtgcactttagcctt 14877046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 46638665 - 46638805
Alignment:
Q  1 acgcgtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagttttt 99  Q
    ||||||| |||||||  ||||| ||||||  ||||||||||| | |||  || |||| || |||||| |||| ||||||||||||||||||||| |||||    
T  46638665 acgcgtgacatgccaaatcagcgttgactttgtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggggctaaaattgtaattttt 46638764  T
Q  100 gtacttagggagccaaaattgcaagtttttgatagttaagg 140  Q
    || | |||||   ||||||| ||| ||||||| ||||||||    
T  46638765 gttcataggggatcaaaattccaactttttgaaagttaagg 46638805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 37728536 - 37728666
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||  |||| | |||||||| ||||  ||||| |||||  |||  ||||||||||||||||||| ||||  ||||||||||||| |||||     
T  37728536 gtcaaaattgactaaaaggatcaaagatgcaaagaagctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaacttttta 37728635  T
Q  131 atagttaaggggggaaaagtgcactttaacct 162  Q
    | |||| ||| || |||| |||||||||||||    
T  37728636 aaagtt-aggaggaaaaaatgcactttaacct 37728666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 55603549 - 55603632
Alignment:
Q  78 gggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    |||||| ||||| |||||||||||||  ||||    |||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  55603549 gggggccaaaatagtagtttttgtacacaggggattaaaattgcaagtttttgaaagttaa-ggggaaaaagtgcactttaacct 55603632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 27257961 - 27258063
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaac 160  Q
    ||||||||||| ||||| |||| |||||||| ||||||||||  ||| | | ||||||||||| ||||| | |||||||||| | |||||||| |||| |    
T  27257961 aaaggggctaaatcttaaggggttaaaattggagtttttgtatatagagggtcaaaattgcaactttttaaaagttaaggggag-aaagtgcattttatc 27258059  T
Q  161 ctta 164  Q
    ||||    
T  27258060 ctta 27258063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 37727826 - 37727693
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||  |||  |||||||||  |||| | |||| ||||| |||| |||||||||||||||||||  ||  ||||||||||| ||| |||||     
T  37727826 gtcaaaattgactaaaatgaccaaagatacaaagagactaaatcttaaggggttaaaattgtagtttttgtatata-agagccaaaattacaacttttta 37727728  T
Q  131 atagttaaggggggaaaagtgcactttaaccttaa 165  Q
    | ||||||| || ||||| | |||||||| |||||    
T  37727727 aaagttaagaggagaaaaatacactttaatcttaa 37727693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 49306934 - 49306778
Alignment:
Q  1 acgcgtggcatg-ccactcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagttttt 99  Q
    |||||||||||| ||| ||| | ||||||  |||||||||||   |||| |||||||||| |||  | |||| || ||  |||| |||||||||||||||    
T  49306934 acgcgtggcatgtccaatcaacattgactttgtcaaaattgataaaaaggaccaaagatgcaaaatgactaaatcatattgggc-aaaattgtagttttt 49306836  T
Q  100 gtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||    ||||||||||||||||||||| ||||  ||||  ||||||||||||||    
T  49306835 gtacttaaatggccaaaattgcaagtttttgaaagtt-gggggaaaaaagtgcacttta 49306778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 33310090 - 33310158
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    |||| |||||| || ||| |||| |||||| ||||||||||| ||||||||| |||||| |||||||||    
T  33310090 aaagaggctaaatcatagagggccaaaattatagtttttgtatttagggagctaaaattacaagttttt 33310158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 147
Target Start/End: Complemental strand, 21178105 - 21178010
Alignment:
Q  52 caaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaa 147  Q
    ||||| || ||| ||||||| | ||||||||  ||||||||||||||||| | |||||   ||||||||||| ||| ||| ||||| |||||||||    
T  21178105 caaagttgcaaaagggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaactttatgaaagttagggggggaaa 21178010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 55602459 - 55602378
Alignment:
Q  77 agggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 159  Q
    ||||| ||||||||||||||||| ||  ||| |  | |||||||||||||||||| ||||||  |||||||| ||||||||||    
T  55602459 aggggactaaaattgtagtttttatatatagaggactaaaattgcaagtttttgaaagttaa-aggggaaaaatgcactttaa 55602378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 3927804 - 3927663
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| |||||||||||| || |||| ||  || ||| ||| |||||||  | ||| || | ||||||||||||||  ||| | ||| |||||||| |||    
T  3927804 ttgaccaagtcaaaattgcccaaaaggactgaaaatgcaaatgggctaaaacatagaggaccaaaattgtagttttcatacatggggggccaaaatcgca 3927705  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctta 164  Q
    |  |||| | |||||  ||||||||||||||||||| |||||    
T  3927704 acattttaaaagttagagggggaaaagtgcactttagcctta 3927663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 26420392 - 26420345
Alignment:
Q  83 ctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 131  Q
    |||||||| || ||||| |||||||||| ||||||||||||||||||||    
T  26420392 ctaaaattataatttttatacttaggga-ccaaaattgcaagtttttga 26420345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 46637757 - 46637713
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    ||||||||||||||||||| |||||||| |||||  |||||||||    
T  46637757 aaaattgtagtttttgtacatagggagctaaaatcacaagttttt 46637713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 7e-45; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 7758560 - 7758405
Alignment:
Q  4 cgtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    |||||||||||||| | || ||||||| ||||||||||||| |||| |||||||||  ||||||| ||| ||||||||||| ||||||||||||||||||    
T  7758560 cgtggcatgccacttaagcgttgactaggtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttagggggcaaaaattgtagtttttgta 7758461  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  7758460 cttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcacttta 7758405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 54540761 - 54540893
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||  |||| | ||||| || ||||||||||| ||||||||||| |||||||||||||||||||||| || | ||||||||||||||||||    
T  54540761 gtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttg 54540860  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | |||||||||||||||||||||||||| ||||    
T  54540861 aaagttaaggggggaaaagtgcactttagcctt 54540893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 12700311 - 12700178
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||||||||| || | |||||| || |||||||  ||||||||||||||||||||||||| ||||||||||||    
T  12700311 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaatgtggctaaatcatagggggtcaaaattgtagtttttgtacttagggggccaaaattgca 12700212  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||||  ||||| |||||||||||||    
T  12700211 agtttttgaaagtta--ggggggaaagtgcacttta 12700178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 7267773 - 7267643
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |  |||| || || | |||||| ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  7267773 gtcaaaattgaccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagtttttg 7267674  T
Q  131 atagttaaggggggaaaagtgcactttaacct 162  Q
    | ||||||| ||||||||||||||||||||||    
T  7267673 aaagttaag-ggggaaaagtgcactttaacct 7267643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 19984979 - 19984852
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |||||||||| ||||||| ||| |||||  |||  ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  19984979 gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttg 19984880  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | | ||| ||||||||||||||||||||    
T  19984879 aaacttagggggggaaaagtgcacttta 19984852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 47614323 - 47614188
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||| ||| |||| |||||||||| |||| |||||| ||||||||||| |||||||| |||||  ||||||||| ||||||||||||    
T  47614323 ttgaataagtcaaaattaaccaaaagcaccaaagatgcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgca 47614224  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||||  |||| ||||||||||||||    
T  47614223 agtttttgaaagttagaggggaaaaagtgcacttta 47614188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 47610524 - 47610682
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||| || || |||||||| ||||||||||   ||||||| ||||| ||||    
T  47610524 gtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 47610623  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    |||||| ||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  47610624 ttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttaacct 47610682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 51470129 - 51469975
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||| | |||| ||||||| || || |||||||| |||||||||| | ||||||| ||||| ||||    
T  51470129 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtac 51470030  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||||||||||||||||||||| | ||| || |||||||||||||||||    
T  51470029 ttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttta 51469975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 46720097 - 46719944
Alignment:
Q  5 gtggcatgccactcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtact 104  Q
    ||||||||||| ||||| ||||||   |||||||||||| |||| |||||| ||| ||| ||||||| |||||| || ||||||||||||||||| |||     
T  46720097 gtggcatgccattcagcgttgacttgatcaaaattgaccaaaaggaccaaatatgcaaatgggctaaatcttagaggactaaaattgtagtttttataca 46719998  T
Q  105 tagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||| |||||||| |||| ||||| | |||||||||||||||| |||||||||    
T  46719997 tagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcacttta 46719944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 22776802 - 22776910
Alignment:
Q  50 accaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaag 149  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||| ||| ||||| ||| |||||||    
T  22776802 accaaatatgcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaag 22776901  T
Q  150 tgcacttta 158  Q
    |||||||||    
T  22776902 tgcacttta 22776910  T

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Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 19986041 - 19986170
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttag--ggagccaaaattgcaagtttt 128  Q
    |||||||||||||||||  |||||||||| ||||||| ||| |||||| |||  ||||||||||||||| ||| |||  || ||||||||||||||||||    
T  19986041 gtcaaaattgaccgaaatgaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttatacataggaggggccaaaattgcaagtttt 19986140  T
Q  129 tgatagttaaggggggaaaagtgcacttta 158  Q
    ||| | ||||| ||||||||||||||||||    
T  19986141 tgaaacttaagaggggaaaagtgcacttta 19986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 46721177 - 46721323
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||| ||||||  |||||||||||||  ||| |||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||| |  |||    
T  46721177 tcagcgttgacttggtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaa 46721276  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    || |||| ||||| | ||||| |||| ||||||||||||||| ||||    
T  46721277 atcgcaactttttaaaagttagggggagaaaagtgcactttagcctt 46721323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 29931326 - 29931229
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||| ||||||||||| |||||||||||||||||| |||||| || |||||||||||||||||| ||||| ||| ||||||||||||||||    
T  29931326 aaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttta 29931229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 29980480 - 29980383
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||| ||||||||||| |||||||||||||||||| |||||| || |||||||||||||||||| ||||| ||| ||||||||||||||||    
T  29980480 aaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcacttta 29980383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 534630 - 534502
Alignment:
Q  30 agtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    ||||||||||| || || | |||||||||| |||  |||||| ||||||||||| ||||||||||||||||||| ||||  | |||||||||||||||||    
T  534630 agtcaaaattggccaaatggaccaaagatgcaaataggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagttttt 534531  T
Q  130 gatagttaaggggggaaaagtgcacttta 158  Q
    || |||||  |||| ||||||||||||||    
T  534530 gagagttagaggggaaaaagtgcacttta 534502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 29932700 - 29932803
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaac 160  Q
    |||||| |||| ||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||| |    
T  29932700 aaagggactaaatcttaaggggtcaaaattgtagtttttgtacttaggg-gccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 29932798  T
Q  161 cttaa 165  Q
    |||||    
T  29932799 cttaa 29932803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 29981854 - 29981957
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaac 160  Q
    |||||| |||| ||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||| |    
T  29981854 aaagggactaaatcttaaggggtcaaaattgtagtttttgtacttaggg-gccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagc 29981952  T
Q  161 cttaa 165  Q
    |||||    
T  29981953 cttaa 29981957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 55191996 - 55192099
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaac 160  Q
    ||||||| ||||||||  ||||| ||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||| | ||||||| |    
T  55191996 aaaggggttaattcttgaggggccaaaattgtagtttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaa-tacactttagc 55192094  T
Q  161 cttaa 165  Q
    |||||    
T  55192095 cttaa 55192099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 8456635 - 8456481
Alignment:
Q  4 cgtggcatgccactcag-ctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    ||||||||||||| ||| | ||||||| ||||||||||||  |||| | ||||  || || | |||||| ||||||||||| ||||||||||||||||||    
T  8456635 cgtggcatgccacgcaggcgttgactaggtcaaaattgactaaaaggatcaaatttgcaatgaggctaaatcttagggggccaaaattgtagtttttgta 8456536  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
     ||||||  |||||||||||||||||||| | || |||||| ||||||||||||||    
T  8456535 tttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcacttta 8456481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 47609827 - 47609700
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||  | |||| ||||||| || || |||||||| |||||||||| | ||||||| ||||| |||||||||| | ||||||||||||||||||    
T  47609827 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttg 47609728  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | ||||| ||||||||||||||| ||||    
T  47609727 aaagttagggggggaaaagtgcatttta 47609700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 23770378 - 23770508
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||| |||||| |||| || ||||||| ||||||| ||| ||||||||||||||||||||||||||||||| || ||  ||||||||| || |||||     
T  23770378 gtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacataagggaccaaaattgtaactttttt 23770477  T
Q  131 atagttaaggggggaaaagtgcactttaacc 161  Q
    | | |||||||| ||||| ||||||||||||    
T  23770478 aaaattaaggggagaaaattgcactttaacc 23770508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 12703490 - 12703602
Alignment:
Q  50 accaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaag 149  Q
    |||||||||| || |||||||| || |||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||||| |||| || ||| |||||    
T  12703490 accaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttgaaagtt-agagggaaaaag 12703588  T
Q  150 tgcactttaacctt 163  Q
    ||||||||| ||||    
T  12703589 tgcactttagcctt 12703602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 51037635 - 51037539
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| | | ||||||||||| ||||||| |||||| ||| |||||||||||||||    
T  51037635 aaaggggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaactttttgaaagttaa-gggagaaaagtgcacttta 51037539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 24516560 - 24516464
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 157  Q
    ||||| ||||| ||||| ||||| ||||||||||||||| ||||||||| ||||||||||||||||||| | ||||| ||||| |||||||||||||    
T  24516560 aaaggagctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagttttttaaagttaggggggaaaaagtgcacttt 24516464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 34019108 - 34019227
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| ||| |||||||||||| |||| |||||||||| ||| | ||||| | ||||||| | ||||||||||| ||||||| ||||| | ||||||||||    
T  34019108 ttgaataaatcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgca 34019207  T
Q  123 agtttttgatagttaagggg 142  Q
    ||||||||| ||||||||||    
T  34019208 agtttttgaaagttaagggg 34019227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 7268835 - 7268928
Alignment:
Q  68 ctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    |||| ||||||| ||| ||||||||||||| | ||||||||  ||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  7268835 ctaaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttaacct 7268928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 54539886 - 54539752
Alignment:
Q  30 agtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    ||||||||||| |  |||| | ||||| || ||| | ||||| |||||||||   |||||||||||||||||| |||||| |  ||||||||||||||||    
T  54539886 agtcaaaattggcaaaaaggatcaaagttgcaaatgagctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagttttt 54539787  T
Q  130 gatagttaaggggggaaaagtgcactttaacctta 164  Q
    || ||||||||| |||||||||||||||| |||||    
T  54539786 gaaagttaagggtggaaaagtgcactttagcctta 54539752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 31645103 - 31645003
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||  | |||| |||||||||| ||| ||||||| ||||||| || ||||||||||||||||| |||||||| |||||||||| |||||||||    
T  31645103 gtcaaaattggtcaaaaggaccaaagatgcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagtttttg 31645004  T
Q  131 a 131  Q
    |    
T  31645003 a 31645003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 5029646 - 5029780
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||||| ||||||||| || | |||| || ||| | | || |||||||||||||||||||  |||||||| ||||| |||||||||  ||||||||||||    
T  5029646 ttgactgagtcaaaatagagcaaaaggacgaaataagcaatggggctaattcttaggggggaaaaattgtggttttggtacttaggaggccaaaattgca 5029745  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || |||||| || | |||||||||||||||||||||    
T  5029746 agattttgaaagat-aggggggaaaagtgcacttta 5029780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 8876044 - 8875909
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||  |||| |||||| ||| |||  |||||| ||||||||||| ||||||||||||||||||| || || || |||||||||    
T  8876044 ttgaataagtcaaaattgactaaaaggaccaaatatgcaaattggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgca 8875945  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
      |||||   | |||||||| |||||||||||||||    
T  8875944 gctttttcgaacttaaggggtgaaaagtgcacttta 8875909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 11671304 - 11671438
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| ||| |||||||||| | |||| |||||||||||||||||| ||| || |||||||  |||  |||||||||| || |||||| || |||||||||    
T  11671304 ttgaataaatcaaaattgatcaaaaggaccaaagatgtaaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaattgca 11671403  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||| ||| || ||||||||||||||    
T  11671404 agtttttgaaagtt-aggcggaaaaagtgcacttta 11671438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 52840608 - 52840702
Alignment:
Q  64 ggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||| ||||||||||  |||||||| |||||  || |||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||    
T  52840608 ggggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaagtttttgaaagttaggggaggaaaagggcacttta 52840702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 47615591 - 47615646
Alignment:
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 47615646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 51470399 - 51470552
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggg-gctaaaattgtagtttttgta 102  Q
    |||||||||||  ||||| ||||||| ||||||||||| | |||| ||||||| || || || ||||| ||||||||| |||||| |||| ||||| |||    
T  51470399 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgctaaa-ttgtggttttggta 51470497  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||   | ||||||||||||||||| |||| ||||||||| |||||||||||    
T  51470498 cttaggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcacttta 51470552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 51038791 - 51038888
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||  |||||||| ||| | ||||||||||||||||| | ||||| | ||||||||||| ||||| | ||||||||| ||||||||||||||||    
T  51038791 aaaggggacaattcttaagggaccaaaattgtagtttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcacttta 51038888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 53616017 - 53616114
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||| |||||||||| ||||||| |||||||||||||||||| || |||   |||||| ||||| ||| | ||||||||| ||||||||||||||||    
T  53616017 aaaggagctaattcttggggggctgaaattgtagtttttgtacataaggaattaaaattacaagtgtttaaaagttaagggaggaaaagtgcacttta 53616114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 40426749 - 40426877
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaatt-gcaagttttt 129  Q
    ||||||||| ||| |||| ||||||||   ||||| ||||| || |||||||| ||||||||| ||||||||  || || ||| ||||| |||| |||||    
T  40426749 gtcaaaattaaccaaaaggaccaaagacacaaaggagctaaatcatagggggccaaaattgtaatttttgtatataaggggccgaaatttgcaacttttt 40426848  T
Q  130 gatagttaaggggggaaaagtgcacttta 158  Q
     | ||||||||||||||||||||||||||    
T  40426849 taaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 47615540 - 47615608
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattg 91  Q
    |||| |||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||| |||||||    
T  47615540 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattg 47615608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 53901391 - 53901484
Alignment:
Q  63 aggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||  ||||||||| || ||||||||||||||||||| |||| ||||||||||| ||||| | | |||  |||||||||||||||||||    
T  53901391 aggggctaatatttagggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaactta--gggggaaaagtgcacttta 53901484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 535787 - 535880
Alignment:
Q  65 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||||||||  |||||| |||||||  |||||| ||  |||||||||||||||||||| ||||| ||| |||||||| |||||||    
T  535787 gggctaaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaagtttttgaaagttaggggtggaaaagtacacttta 535880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 23769986 - 23769862
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |||||||||| ||| | || || ||||||||| | |||||||||||||||| || ||| |    |||||||||| || |||    
T  23769986 gtcaaaattgaccaaaaggaccaaagatgcaaatgagcgaaatcttaggggtc-aaaattgtagtttttgcacatagaggattaaaattgcaacttgttg 23769888  T
Q  131 atagttaaggggggaaaagtgcactt 156  Q
    | ||||||||| ||||||||||||||    
T  23769887 aaagttaagggtggaaaagtgcactt 23769862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 52105624 - 52105709
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    ||||| ||||| |||||||||||| || |||| ||||||||||||||| |||||| | |||||| | ||||||||||| |||||||    
T  52105624 tcagcgttgaccaagtcaaaattggccaaaaggaccaaagatgtaaagaggctaaattttagggagttaaaattgtagcttttgta 52105709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 5001275 - 5001203
Alignment:
Q  86 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||| |||||||||| |||||||||||||| |||||| || || ||| ||||||||||||||||    
T  5001275 aaattgtggttttggtacttagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcacttta 5001203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 49216377 - 49216250
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| || |||  | |||||||| ||| | ||||| ||||| ||||  | ||||||||||||||||| ||||| | ||||||||||| ||||||    
T  49216377 gtcaaaattggccaaaatgatcaaagatgcaaatgagctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaactttttg 49216278  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | | ||| | | ||||||||||||||||    
T  49216277 aaacttaggcgtggaaaagtgcacttta 49216250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 54986978 - 54987110
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| || |||  | |||||||| ||||| ||||| |||||| |||  |||||| |||||||| ||| |||||  | ||||| |||| ||||||    
T  54986978 gtcaaaattggccaaaatgatcaaagatgcaaaggagctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaactttttg 54987077  T
Q  131 atagttaaggggggaaaagtgcactttaaccttaa 165  Q
    | | |||  ||||||||||||||||||||||||||    
T  54987078 aaactta--gggggaaaagtgcactttaaccttaa 54987110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 158
Target Start/End: Complemental strand, 53614914 - 53614822
Alignment:
Q  65 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||||||| |||||| ||||||||||||||| ||  ||| |  | ||||||| |||||||||| ||||||||| |||||| |||||||||    
T  53614914 gggctaattctt-gggggccaaaattgtagtttttatatatagaggactaaaattgtaagtttttgaaagttaagggaggaaaaatgcacttta 53614822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 52104588 - 52104479
Alignment:
Q  50 accaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaag 149  Q
    |||||||||| ||| | | ||| ||||||| ||| |||||| |||||||||||| ||||   |||||||| ||| ||||||| |||||  ||||||||||    
T  52104588 accaaagatgcaaatgagttaaatcttaggtggccaaaattatagtttttgtacatagg--accaaaattacaactttttgaaagtta--gggggaaaag 52104493  T
Q  150 tgcactttaacctt 163  Q
    |||| |||||||||    
T  52104492 tgcattttaacctt 52104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 28262336 - 28262196
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||| || ||||||||| || |||| ||  ||  || || ||||||||  | |||||||| |||||||| |||||  ||| | ||| ||||||    
T  28262336 tcagctttgaccaattcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaa 28262237  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || ||||  |||||| ||||| ||||||||||||||||||||    
T  28262236 atcgcaacgttttgaaagtta-ggggggaaaagtgcacttta 28262196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 28263068 - 28263209
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||| || ||||||||| || |||| ||  ||  || || ||||||||  | |||||||| |||||||| |||||  ||| | ||| ||||||    
T  28263068 tcagctttgaccaattcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaa 28263167  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || ||||  |||| | ||||| ||||||||||||||||||||    
T  28263168 atcgcaacgttttaaaagttagggggggaaaagtgcacttta 28263209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 52276448 - 52276307
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||| || ||||||||| || |||| ||  ||  || || ||||||||  | |||||||| |||||||| |||||  ||| | ||| ||||||    
T  52276448 tcagctttgaccaattcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgttgttttcatacatggggggccaaa 52276349  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || ||||  |||||| || || ||||||||||||||||||||    
T  52276348 atcgcaacgttttgaaagatagggggggaaaagtgcacttta 52276307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 52281504 - 52281645
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||| || ||||||||| || |||| ||  ||  || || ||||||||  | |||||||| |||||||| |||||  ||| | ||| ||||||    
T  52281504 tcagctttgaccaattcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaa 52281603  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || ||||  |||||| || || ||||||||||||||||||||    
T  52281604 atcgcaacgttttgaaagatagggggggaaaagtgcacttta 52281645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 6170349 - 6170281
Alignment:
Q  84 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgc 152  Q
    |||||||||| |||||||||||| ||   ||||||||||||||||||| ||||| ||| | ||||||||    
T  6170349 taaaattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagttatgggtgaaaaagtgc 6170281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 18442775 - 18442628
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||| || ||||||||| || |||| ||  ||  || || ||||||||  | |||||||| ||||||||||||||  ||| | ||| ||||||    
T  18442775 tcagctttgaccaattcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaa 18442676  T
Q  117 attgcaagtttttgatagtta-aggggggaaaagtgcactttaacctt 163  Q
    || ||||  |||||| |||||  |||||| ||||||||||||| ||||    
T  18442675 atcgcaacgttttgaaagttagggggggggaaagtgcactttagcctt 18442628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 19487849 - 19487702
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||| || ||||||||| || |||| ||  ||  || || ||||||||  | |||||||| ||||||||||||||  ||| | ||| ||||||    
T  19487849 tcagctttgaccaattcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtagttttcatacatggggggccaaa 19487750  T
Q  117 attgcaagtttttgatagtta-aggggggaaaagtgcactttaacctt 163  Q
    || ||||  |||||| |||||  |||||| ||||||||||||| ||||    
T  19487749 atcgcaacgttttgaaagttagggggggggaaagtgcactttagcctt 19487702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 51347406 - 51347267
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||||| ||||| ||||| | |||  | ||||| || ||| ||| ||| ||||||||||  ||||||||  ||||||| | ||| |  |||||||||||    
T  51347406 ttgactaggtcaacattgatcaaaatgatcaaagttgcaaacgggttaaatcttagggggtcaaaattgtcatttttgttcatagaggaccaaaattgca 51347307  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    | ||||| | | ||||| |||| |||||||||||||||||    
T  51347306 actttttcaaacttaagagggggaaagtgcactttaacct 51347267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 6249686 - 6249633
Alignment:
Q  84 taaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 137  Q
    ||||||||||||||||||||||| ||    |||||||||||||||||| |||||    
T  6249686 taaaattgtagtttttgtacttaagggattaaaattgcaagtttttgaaagtta 6249633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 148
Target Start/End: Complemental strand, 11670522 - 11670397
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||| | |||| || ||| ||| || ||| |||| || || ||| | |||||| |||||||| |||||||||  | |||||||||    
T  11670522 ttgaataagtcaaaattgatcaaaaggacaaaaaatgcaatgggactaaatcataagggaccaaaattatagtttttatacttaggggactaaaattgca 11670423  T
Q  123 agtttttgatagttaaggggggaaaa 148  Q
    | ||||||| | ||||| ||| ||||    
T  11670422 aatttttgaaaattaagcgggaaaaa 11670397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 5e-43; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 19753049 - 19752910
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||||||||| || |||||||| || |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  19753049 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaattgca 19752950  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||||| |||| ||||||||||||||||||||| ||||    
T  19752949 agtttttgaaagtt-aggggggaaaagtgcactttagcctt 19752910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 18486865 - 18487000
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||| |||||||| |||| | ||||||||| ||||||||||||    
T  18486865 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagggggccaaaattgca 18486964  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||||||||||| |||||||||||||    
T  18486965 agtttttgaaagttaagggggggaaagtgcacttta 18487000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 25523207 - 25523063
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| ||| |||||||||| | |||| | |||||||| ||||||||||| ||||||||||  ||||||||||||||||||||||||| || |||||||||    
T  25523207 ttgaataaatcaaaattgatcaaaaggatcaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacttagggggctaaaattgca 25523108  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaaccttaaca 167  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||    
T  25523107 agtttttgaaagttaaggggggaaaagtgcactttagcctaaaca 25523063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 16650798 - 16650953
Alignment:
Q  4 cgtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    ||||||||||||| || || ||||||   |||||||||||| |||| |||||||||| ||| |||||||  |||||||||||||||||||||||||| ||    
T  16650798 cgtggcatgccacacatgcgttgacttgatcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggggctaaaattgtagtttttata 16650897  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| | ||||||||||||||||| | ||||||||| ||||||||||||||||    
T  16650898 cttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcacttta 16650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 22940566 - 22940720
Alignment:
Q  4 cgtggcatgccactcag-ctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    |||||||||||||| || | ||||||  ||||||||||||| |||| |  ||||||| ||||||||||| | ||||||| | ||||||||| ||||||||    
T  22940566 cgtggcatgccacttaggcgttgacttggtcaaaattgaccaaaaggataaaagatgaaaaggggctaaattttaggggtc-aaaattgtaatttttgta 22940664  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22940665 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcacttta 22940720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 24333043 - 24332911
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |||||||||| ||||||| ||| |||||| |||  ||||||||||||||||||| || || ||||||||||||||||||||    
T  24333043 gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttg 24332944  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | | ||||||||| |||||||||||||||||||    
T  24332943 aaacttaagggggaaaaagtgcactttaacctt 24332911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 28538806 - 28538679
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||  |||| | ||||| || ||||||||||| |||||||||||||||||||||||||||||||||| || | ||||||||||||||||||    
T  28538806 gtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttg 28538707  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | ||||| ||| ||||||||||||||||    
T  28538706 aaagttacgggtggaaaagtgcacttta 28538679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 20216768 - 20216865
Alignment:
Q  65 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    |||||||||||| |||||| ||||||||||||||||||  |||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  20216768 gggctaattcttggggggccaaaattgtagtttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttaacct 20216865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 159
Target Start/End: Complemental strand, 42195290 - 42195136
Alignment:
Q  4 cgtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    ||||||||||||  ||||| ||||||  ||||||||||||| |||| |||||||||| ||||||||||| ||||||||| | |||||||||| |||||||    
T  42195290 cgtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtagattttgta 42195191  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaa 159  Q
    | ||||| |||||||| |||| ||||| | |||||| ||||||||||||||||||||    
T  42195190 catagggggccaaaatcgcaacttttt-aaagttaa-gggggaaaagtgcactttaa 42195136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 19754093 - 19754217
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||  | |||| |||||||||| || |||||||| || |||||||| |||||||||||||||||| |||||| ||||||||||||    
T  19754093 ttgaataagtcaaaattgttcaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgca 19754192  T
Q  123 agtttttgatagttaaggggggaaaa 148  Q
    ||||||||| |||| |||||||||||    
T  19754193 agtttttgaaagtt-aggggggaaaa 19754217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 5778780 - 5778934
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||| || || |||||||| ||||||||||   ||||||| ||||| ||||    
T  5778780 gtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 5778879  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| || |||||||||||||||||| |||||  |||||||||||||||||||    
T  5778880 ttagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 5778934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 36486459 - 36486593
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||  |||| | ||||| || |||||| |||| ||||||||| | ||||||||||||||||||||||||| | |||||||||||||||||     
T  36486459 gtcaaaattgacaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagttttta 36486558  T
Q  131 atagttaaggggggaaaagtgcactttaaccttaa 165  Q
    | ||||| ||||| |||||||||||| | ||||||    
T  36486559 aaagttaggggggaaaaagtgcacttcagccttaa 36486593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 25056343 - 25056479
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaagg-ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgc 121  Q
    ||||| |||||||||||| |  ||| ||||||||||||||| | |||||| ||||||||||  ||||||||||||||  ||||||||| | |||||||||    
T  25056343 ttgaccaagtcaaaattggctaaaacaaccaaagatgtaaatgaggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgc 25056442  T
Q  122 aagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||||| ||||| | | ||||||||||||||||    
T  25056443 aagtttttgaaagttaggagtggaaaagtgcacttta 25056479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 42196144 - 42196298
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||  ||||||||||||| |||| |||||||||| ||| ||||||| ||||||||| |||||| ||||||||||||||    
T  42196144 gtggcatgccaaatcagcgttgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggactaaaaatgtagtttttgtac 42196243  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
     ||| | |||||| |  ||| ||||| | ||||| |||||| |||||||||||||    
T  42196244 atagagggccaaattcacaactttttaaaagttaggggggggaaagtgcacttta 42196298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 28539791 - 28539922
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| |  |||| | ||||| || |||||| |||| ||||||||| | ||||||||||||||||||||||| | | |||||||||||||||||     
T  28539791 gtcaaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaagttttta 28539890  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | |||| ||||||||||| ||||||||||||||    
T  28539891 aaagtt-aggggggaaaaatgcactttaacctt 28539922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 25524061 - 25524158
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattg 120  Q
    |||| |||||||||||||||| |||| || ||||||| ||||||||||| ||||||||||  |||||| |||||||||||||||||  ||||||||||    
T  25524061 ttgaataagtcaaaattgaccaaaaggactaaagatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 33160291 - 33160384
Alignment:
Q  65 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||| ||||  ||||||||||||| | ||||||||| || |||||||||||||||||| | ||||||||||||||||||||||||    
T  33160291 gggctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcacttta 33160384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 2186900 - 2186774
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| ||||||||||||||  |||||| |||||||||  |||||||||||||||||||| |||    |||||||||||| ||||||    
T  2186900 gtcaaaattgaccaaaaggaccaaagatgtaaaatggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaactttttg 2186801  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | | || |||||| |||| |||||||||    
T  2186800 aaactt-agggggaaaaaatgcacttta 2186774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 5730806 - 5730933
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||| | |||||||||||| || || |||| ||| ||||||||||   ||||||| ||||| ||||    
T  5730806 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaagaaccaaagttgcaatggggttaaatcttagggggactaaattgtggttttggtac 5730905  T
Q  104 ttagggagccaaaattgcaagtttttga 131  Q
    |||||| |||||||||| ||||||||||    
T  5730906 ttagggggccaaaattggaagtttttga 5730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 25055570 - 25055415
Alignment:
Q  4 cgtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    ||||||||||||  ||||| ||||||   |||||||||| | |||| |||||||||| ||| ||||||| ||||||||||| ||||||||||||||| ||    
T  25055570 cgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttttata 25055471  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    | |||||   ||||||||||||   || | |||||  |||||||||||||||||||    
T  25055470 cataggggatcaaaattgcaagaagtttaaagttagagggggaaaagtgcacttta 25055415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 7311685 - 7311607
Alignment:
Q  66 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg 144  Q
    |||||| ||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||||||| ||||| ||||||    
T  7311685 ggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaagtttttgaaagttaggggggg 7311607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 16650150 - 16650044
Alignment:
Q  4 cgtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    ||||||||||||| || || ||||||  ||||||||||||| |||| |||||||||| ||||||| ||| |||||| |||  ||||||||||||||||||    
T  16650150 cgtggcatgccacacatgcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgta 16650051  T
Q  103 cttaggg 109  Q
    |||||||    
T  16650050 cttaggg 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 40255676 - 40255770
Alignment:
Q  64 ggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||| ||| ||||||||||| ||||||||||||| |||| |||||| | ||||||||||||||||| | | ||||| ||||||||||||||||||    
T  40255676 ggggttaaatcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcacttta 40255770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 5730517 - 5730444
Alignment:
Q  86 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagg-ggggaaaagtgcacttta 158  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  5730517 aaattgtggttttggtacttaggaagccaaaattgcaagtttttgaaagttaagggggggaaaagtgcacttta 5730444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 18485283 - 18485136
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaa-------ttgtagtttttgtacttagggagccaa 115  Q
    |||| |||||||||||| ||| |||| | |||||||| ||||||||||| ||||||||||| ||||       |||| |||||  ||||||||| |||||    
T  18485283 ttgaataagtcaaaattaaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaacccaaaattgttgttttgatacttagggggccaa 18485184  T
Q  116 aattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||||||||||||| | |||||  |||| |||||||||||||| ||||    
T  18485183 aattgcaagttttttaaagttagaggggaaaaagtgcactttagcctt 18485136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 20214287 - 20214199
Alignment:
Q  69 taattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||  ||||| ||||||||||||||||||| ||| | || |||||||||||||||||| ||||||| ||||||||||||||||||    
T  20214287 taattcttgaggggccaaaattgtagtttttgtacatagagtgctaaaattgcaagtttttgaaagttaag-ggggaaaagtgcacttta 20214199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 1015600 - 1015492
Alignment:
Q  45 aaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg 144  Q
    |||| |||||| ||| |||||| ||||||||||||||| ||||||||||| ||||||||  |||| |||||||||| || ||||| | ||||| ||| ||    
T  1015600 aaaggaccaaatatgcaaagggactaattcttagggggttaaaattgtaggttttgtacacagggggccaaaattgtaactttttaaaagttaggggagg 1015501  T
Q  145 aaaagtgca 153  Q
    |||||||||    
T  1015500 aaaagtgca 1015492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 33158174 - 33158095
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 164  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||||  |||| ||||||||| |||||    
T  33158174 aaaattgtagtttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcctta 33158095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 5778015 - 5777904
Alignment:
Q  45 aaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg 144  Q
    |||| ||||||| || || |||||||| ||||||||||   ||||||| ||||| |||||||||| | ||||||||||||||||||| |||||  |||||    
T  5778015 aaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagtta--ggggg 5777918  T
Q  145 aaaagtgcacttta 158  Q
     |||||||||||||    
T  5777917 gaaagtgcacttta 5777904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 1796130 - 1796057
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||| ||||| ||| |||||| |||||||||    
T  1796130 aaaattgtagtttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcacttta 1796057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 2686364 - 2686505
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||| | |||| |||||||||| || | |||||| || |||||| | |||||| ||||||||||||||| |    ||||||||||    
T  2686364 ttgaataagtcaaaattgatcaaaaggaccaaagatgcaatgaggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgca 2686463  T
Q  123 agtttttgatagtta-agg-ggggaaaagtgcactttaacct 162  Q
    ||||||| | ||||| ||| |||| |||||||||||||||||    
T  2686464 agtttttaaaagttagaggagggggaaagtgcactttaacct 2686505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 36485430 - 36485303
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||  |||  | ||||| || ||||||| ||| ||||||||||| |||||| ||||||||||||||| |  | |||||||| ||||||||     
T  36485430 gtcaaaattgacaaaaatgatcaaagttgcaaaggggttaaatcttagggggccaaaattatagtttttgtacttaagaggtcaaaattgtaagtttttt 36485331  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | ||||| ||| |||||| |||||||||    
T  36485330 aaagttaggggtggaaaaatgcacttta 36485303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 34893739 - 34893689
Alignment:
Q  87 aattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 137  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  34893739 aattgtagtttttgtacatagggagccaaaattgcaagtttttgaaagtta 34893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 18154569 - 18154497
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||| ||||||||||  |||||| |||||||    
T  18154569 aaaattgtagtttttgtacttaggg-gtcaaaattgtaagtttttgaaagttaaggggaaaaaagttcacttta 18154497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 158
Target Start/End: Original strand, 25524141 - 25524226
Alignment:
Q  74 cttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta-aggggggaaaagtgcacttta 158  Q
    |||||| ||| ||||||||||||||||||||||||| ||||||||| ||| ||||| | | |||  ||||||||||||||||||||    
T  25524141 cttaggaggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcacttta 25524226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 1797268 - 1797366
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    |||||||||||   || ||| ||||| || ||||||||||| ||||| ||| | |||||||||||||||||   || ||||||||||||||||||||||    
T  1797268 gtcaaaattgaaaaaaggaatcaaagttgcaaaggggctaaatcttaagggaccaaaattgtagtttttgtttataaggagccaaaattgcaagttttt 1797366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 5962557 - 5962643
Alignment:
Q  45 aaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 131  Q
    |||| ||||||||||||||   ||||| | ||||| |||||||||| ||||||||||||||||||  |||||||| ||| |||||||    
T  5962557 aaaggaccaaagatgtaaattagctaaatattaggtggctaaaattatagtttttgtacttaggggaccaaaattacaaatttttga 5962643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 38834179 - 38834087
Alignment:
Q  68 ctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacc 161  Q
    |||| |||||||| |||||||||||||||||||||| || || | |||||| |||| ||||| | ||||||||||  |||| ||||||||||||    
T  38834179 ctaaatcttagggagctaaaattgtagtttttgtacataagg-gtcaaaatcgcaactttttaaaagttaaggggaaaaaaatgcactttaacc 38834087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 21835149 - 21835039
Alignment:
Q  52 caaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtg 151  Q
    ||||| || ||||||| ||| ||||||||||  ||||||||||||||||||| ||||| | ||||||  ||| ||||| | | || || |||| ||||||    
T  21835149 caaagttgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaactttttcaaactt-agagggggaaagtg 21835051  T
Q  152 cactttaacctt 163  Q
    ||||||| ||||    
T  21835050 cactttagcctt 21835039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 2685820 - 2685774
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 131  Q
    |||||||||||||||||||||||||  ||||||||  ||||||||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttga 2685774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 4e-40; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 10006482 - 10006347
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||| |||||||| |||||  ||||||||| ||||||||||||    
T  10006482 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgca 10006383  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||||  |||||||||||||||||||    
T  10006382 agtttttgaaagttagagggggaaaagtgcacttta 10006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 10007726 - 10007861
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||  |||| |||||||||| ||||||||||| ||||||||| | |||||||| |||| | ||||||||| ||||||||||||    
T  10007726 ttgaataagtcaaaattgacgaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtggtttctatacttagggggccaaaattgca 10007825  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| ||||||||||||||||||||||||||    
T  10007826 agtttttgaaagttaaggggggaaaagtgcacttta 10007861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 30335796 - 30335637
Alignment:
Q  5 gtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||| || || ||||||  ||||||||||| | |||| |||||||||| ||||||||||| |||||||||| |||||||||| |||||||||    
T  30335796 gtggcatgccacacatgcgttgacttggtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtac 30335697  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||| ||||||||||||||||||||| | ||||||||| |||||| ||||||||| ||||    
T  30335696 ttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcctt 30335637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 1824041 - 1824174
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||||||||| |||  |||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  1824041 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgca 1824140  T
Q  123 agtttttgatagttaaggggggaaaagtgcactt 156  Q
    ||||||||| |||||  ||||||||| |||||||    
T  1824141 agtttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 1858486 - 1858619
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||||||||| |||  |||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  1858486 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgca 1858585  T
Q  123 agtttttgatagttaaggggggaaaagtgcactt 156  Q
    ||||||||| |||||  ||||||||| |||||||    
T  1858586 agtttttgaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 5514119 - 5513985
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||| | |||| |||||||||| ||||||||||| | ||||||||  ||||||||||||||||||||||||| |||||||||| |    
T  5514119 ttgaataagtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattgga 5514020  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||| |||||| ||||||||||||||    
T  5514019 agtttttgaaagtt-agggggtaaaagtgcacttta 5513985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 8389646 - 8389791
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||||  ||||||||||  | |||| |||||| ||||||||||| ||| ||||||||| ||||||||||||||||||||| || ||  |||||    
T  8389646 tcagctttgacttggtcaaaattgttcaaaaggaccaaaaatgtaaaggggttaaatcttaggggactaaaattgtagtttttgtacataagggaccaaa 8389745  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    ||||||| ||||||| | ||||| ||||||||||||||||||||||    
T  8389746 attgcaactttttgaaacttaagaggggaaaagtgcactttaacct 8389791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 22221327 - 22221467
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| |||||||||||| |  |||| | |||||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||| | ||||||||||    
T  22221327 ttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgca 22221426  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||||| ||||| ||| |||||||||||||||| ||||    
T  22221427 agtttttgaaagttaggggtggaaaagtgcactttagcctt 22221467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 22227669 - 22227809
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| |||||||||||| |  |||| | |||||||||||||||||||| ||||||||||  ||||||||||||||  ||||||||| | ||||||||||    
T  22227669 ttgaccaagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgca 22227768  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||||| ||||| ||| |||||||||||||||| ||||    
T  22227769 agtttttgaaagttaggggtggaaaagtgcactttagcctt 22227809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 12353332 - 12353462
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| ||||||  |||  || || |||||||| ||||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||||    
T  12353332 gtcaaaattgaccaaaagaattaaaattgcaatggggctaaatcttagggggccaaaattatagtttt-gtacttagggggccaaaattgcaagtttttg 12353430  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | |||||| ||||||||||||||||||| ||||    
T  12353431 aaagttaa-gggggaaaagtgcactttagcctt 12353462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 24123869 - 24123981
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |||||||||| ||||||||||| ||||||| ||||||||||||| |||| ||||||| |  ||||||||||||||||||||    
T  24123869 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagtttttg 24123968  T
Q  131 atagttaaggggg 143  Q
    | ||||| |||||    
T  24123969 aaagttacggggg 24123981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 40471118 - 40471249
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||  |||||||||  |||| || ||| ||||| |||||||||||||||||||||||| ||| ||| ||||||||| ||||||||     
T  40471118 gtcaaaattgaccaaaatgaccaaagatacaaagaggttaaatcttaaggggctaaaattgtagtttttgtatttatgga-ccaaaattgtaagtttttt 40471216  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | |||||| ||||||||||||||||||||||||    
T  40471217 aaagttaaagggggaaaagtgcactttaacctt 40471249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 22220546 - 22220391
Alignment:
Q  4 cgtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    ||||||||||||  ||||| ||||||   |||||||||| | |||| |||||||||| ||| ||||||| ||||||||||| ||||||||||||||| ||    
T  22220546 cgtggcatgccaaatcagcattgacttgctcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttttata 22220447  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    | ||||| | ||||||||||||| ||| | |||||  |||||||||||||||||||    
T  22220446 catagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcacttta 22220391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 24123012 - 24122886
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |||||||||| ||||  ||||| ||||||||| |||||||| |||||||||||||||||| | ||||||||||| |||||     
T  24123012 gtcaaaattgaccaaaaggaccaaagatgcaaagaagctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaatttttt 24122913  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | |||| ||||||||||| |||||||||    
T  24122912 aaagtt-aggggggaaaaatgcacttta 24122886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 30336444 - 30336599
Alignment:
Q  4 cgtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    ||||||||||||| || || ||||||  ||||||||||||| |||| |||||||||| |||  |||||| |||||| ||| |||||||||||||||||||    
T  30336444 cgtggcatgccacacatgcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagagggttaaaattgtagtttttgta 30336543  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||  || ||||||  |||||||||| ||||| ||||| | ||||||||||||    
T  30336544 cttaggaggctaaaattataagtttttgaaagttaggggggaagaagtgcacttta 30336599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 64 - 165
Target Start/End: Original strand, 29968341 - 29968441
Alignment:
Q  64 ggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||||||| ||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||||||| ||    
T  29968341 ggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaa-gggggaaaagtgcactttaacttt 29968439  T
Q  164 aa 165  Q
    ||    
T  29968440 aa 29968441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 12352016 - 12351917
Alignment:
Q  66 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 165  Q
    |||||| ||||||||||  ||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||||||| ||| ||||||||| ||||||    
T  12352016 ggctaaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagccttaa 12351917  T

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Target: chr8; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 37 - 163
Target Start/End: Original strand, 32207302 - 32207426
Alignment:
Q  37 attgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtt 136  Q
    ||||||| |||| |||||||||| |||| |||||| ||||| | ||| ||||||||||||||||||||||||| | |||||||||||||||||||  |||    
T  32207302 attgaccaaaaggaccaaagatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagtttttgaaggtt 32207401  T
Q  137 aaggggggaaaagtgcactttaacctt 163  Q
    |  ||||| ||||||||||||| ||||    
T  32207402 a--ggggggaaagtgcactttagcctt 32207426  T

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Target: chr8; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 43661395 - 43661268
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||| |||||| ||||||||||||||| ||||||||||| ||||||||||| |||||| |||||||||||| || ||  ||||||||| || |||||     
T  43661395 gtcaaagttgaccaaaagaaccaaagatgcaaaggggctaaatcttagggggccaaaattatagtttttgtacataagggaccaaaattgtaactttttt 43661296  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | | |||||||  |||||||||||||||    
T  43661295 aaaattaagggtagaaaagtgcacttta 43661268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 18978128 - 18978029
Alignment:
Q  52 caaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtg 151  Q
    ||||| || ||||||||||| ||||| ||||| ||||||||||||||||||||||||| |||||||||| ||| |||||| |||| ||||||||||||||    
T  18978128 caaagttgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaagattttgaaagtt-aggggggaaaagtg 18978030  T

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Target: chr8; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 18979091 - 18979218
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| |  |||| | ||||| || ||| ||||||| || || ||||| ||||||||||||||| || |||||| |||||||||||||||| |||    
T  18979091 gtcaaaattggcaaaaaggatcaaagttgcaaatgggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaagttgttg 18979190  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | ||||| ||||||||||||||||||||    
T  18979191 aaagttagggggggaaaagtgcacttta 18979218  T

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Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 1823691 - 1823550
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaaga-tgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgc 121  Q
    |||| ||| ||||||||| || |||| |||||| | || ||| ||||||| ||||||||| |  |||||||||||||||||||||| | | |||||||||    
T  1823691 ttgaataaatcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgc 1823592  T
Q  122 aagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||||||| | ||||||||||| |||||| ||||||| ||||    
T  1823591 aagtttttaaaagttaagggggaaaaagtacactttagcctt 1823550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 1858136 - 1857995
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaaga-tgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgc 121  Q
    |||| ||| ||||||||| || |||| |||||| | || ||| ||||||| ||||||||| |  |||||||||||||||||||||| | | |||||||||    
T  1858136 ttgaataaatcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgc 1858037  T
Q  122 aagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||||||| | ||||||||||| |||||| ||||||| ||||    
T  1858036 aagtttttaaaagttaagggggaaaaagtacactttagcctt 1857995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 11287868 - 11287779
Alignment:
Q  69 taattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||||| | ||||| ||| | ||||||||||||||    
T  11287868 taattcttagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagttttttaaagttaggggtgaaaaagtgcacttta 11287779  T

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Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 43661767 - 43661928
Alignment:
Q  5 gtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||| || || ||||||  ||||||||||| | |||| |||||||||| ||  |||| || ||||||||||| |||||| ||||||||||||    
T  43661767 gtggcatgccacacatgcgttgacttggtcaaaattgatcaaaaggaccaaagatgcaattgggcgaaatcttagggggccaaaattttagtttttgtac 43661866  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 165  Q
     ||| |    |||||||||| ||||||| ||||||||| |||||||||||||| | ||||||    
T  43661867 atagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagccttaa 43661928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 8388592 - 8388462
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||  | |||| |||||| | | ||||||||||| ||||||||||| |||||| |||||||||||| ||||| || |||||||||| |||||     
T  8388592 gtcaaaattgggcaaaaggaccaaaaacgcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaacttttta 8388493  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | |||||  ||||| ||||||||||||| ||||    
T  8388492 aaagtta--ggggggaaagtgcactttagcctt 8388462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 11282108 - 11282007
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaac 160  Q
    ||||||| ||| ||||||||||  ||||||||  ||||||||  ||||| ||||||||||||| ||||| | ||||||||||| ||||||||||||||||    
T  11282108 aaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcactttaac 11282009  T
Q  161 ct 162  Q
    ||    
T  11282008 ct 11282007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 18971040 - 18970920
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| |  |||| ||||||| || ||||||| ||| ||||  ||||  ||||||||||||||||||||||||| |||||||||| ||| |||||    
T  18971040 gtcaaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaagattttg 18970941  T
Q  131 atagttaaggggggaaaagtgc 152  Q
    | |||| |||||||||||||||    
T  18970940 aaagtt-aggggggaaaagtgc 18970920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 11283153 - 11283307
Alignment:
Q  4 cgtggcatgccactcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||||| ||| ||||||  ||||||||||||  |||  | ||||  || ||||||||||| | ||||||| | ||||||||  ||||| |||    
T  11283153 cgtggcatgccactaagcgttgactttgtcaaaattgactaaaatgatcaaaattgcaaaggggctaaattttaggggaccaaaattgtcatttttatac 11283252  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
     ||||| || |||||| ||| ||||||| |||||||||||| ||| |||||||||    
T  11283253 atagggggctaaaattacaactttttgaaagttaagggggggaaaatgcacttta 11283307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 2379895 - 2380010
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| ||||||||||||||| ||| | ||||| ||||| ||||| |||||||||| ||| |||| ||||| ||||||||| ||| ||||||    
T  2379895 gtcaaaattgaccaaaagaaccaaagatgcaaatgagctaaatcttaaggggccaaaattgtag-tttcgtacataggg-gccaaaattacaactttttg 2379992  T
Q  131 atagttaaggggggaaaagt 150  Q
    | |||||  |||||||||||    
T  2379993 aaagtta--gggggaaaagt 2380010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 30570227 - 30570358
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| || |||| |||||||||| ||| ||||||| ||||||||||| |||||| || ||||||||| || |||  ||||||||||| |||||     
T  30570227 gtcaaaattggccaaaaggaccaaagatgcaaaagggctaaatcttagggggccaaaattctaatttttgtacataagga-tcaaaattgcaacttttta 30570325  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | | |||  |||| ||| |||||||||||||||    
T  30570326 aaacttagaggggaaaaggtgcactttaacctt 30570358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 29043528 - 29043401
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| |  |||| | |||||||  ||||||||||| |||||| |||  ||||||||||||||||||| ||||| | |||||| || | ||||||    
T  29043528 gtcaaaattgtctaaaaggatcaaagatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaatcgcgactttttg 29043429  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    |  |||||||| ||||||||| ||||||    
T  29043428 aaggttaagggaggaaaagtgaacttta 29043401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 45114541 - 45114612
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 156  Q
    ||||||||||||| ||||| ||| || |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  45114541 aaaattgtagtttgtgtacatagtgaaccaaaattgcaagtttttgaaagttaggggcggaaaagtgcactt 45114612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 34625163 - 34625241
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgt 101  Q
    ||||||||||||||||||||| |||| | ||||| ||  ||| || ||| || ||||||||||||||||||||||||||    
T  34625163 ttgactaagtcaaaattgaccaaaaggatcaaagttgcgaagagggtaaatcatagggggctaaaattgtagtttttgt 34625241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 38980001 - 38980147
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||| || ||||||||| || |||| ||  ||  || || ||||||||  | |||||||| |||||||| |||||  ||| | ||| ||||||    
T  38980001 tcagctttgaccaattcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaa 38980100  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    || ||||  |||||| ||||| |||||||||||||||||||| ||||    
T  38980101 atcgcaacgttttgaaagttagggggggaaaagtgcactttagcctt 38980147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 39011098 - 39011244
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||| || ||||||||| || |||| ||  ||  || || ||||||||  | |||||||| |||||||| |||||  ||| | ||| ||||||    
T  39011098 tcagctttgaccaattcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaa 39011197  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    || ||||  |||||| ||||| |||||||||||||||||||| ||||    
T  39011198 atcgcaacgttttgaaagttagggggggaaaagtgcactttagcctt 39011244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 38974939 - 38974798
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||| || ||||||||| || |||| ||  ||  || || ||||||||  | |||||||| |||||||| |||||  ||| | ||| ||||||    
T  38974939 tcagctttgaccaattcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaa 38974840  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || ||||  |||||| ||||| ||||||||||||||||||||    
T  38974839 atcgcaacgttttgaaagttagggggggaaaagtgcacttta 38974798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 39006037 - 39005896
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||| || ||||||||| || |||| ||  ||  || || ||||||||  | |||||||| |||||||| |||||  ||| | ||| ||||||    
T  39006037 tcagctttgaccaattcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaa 39005938  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || ||||  |||||| ||||| ||||||||||||||||||||    
T  39005937 atcgcaacgttttgaaagttagggggggaaaagtgcacttta 39005896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 11456747 - 11456679
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattg 91  Q
    |||| |||||||||||||||| |||| |||||||||| || |||||||| || |||||||| |||||||    
T  11456747 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattg 11456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 24488684 - 24488763
Alignment:
Q  64 ggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg 144  Q
    |||||||| ||||| ||||| |||||||| |||||  || |||||| ||||||||||||||||||||| ||||| ||||||    
T  24488684 ggggctaaatcttacggggc-aaaattgttgttttgatatttagggggccaaaattgcaagtttttgaaagttaggggggg 24488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 45112969 - 45112875
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 157  Q
    ||||||||||||||||||||| | |||||| || ||||||||||||| || | |||||| ||| ||||||| |||| |||| |||||| ||||||||    
T  45112969 aaaggggctaattcttaggggaccaaaattataatttttgtacttagaga-ctaaaattacaaatttttgaaagtt-agggaggaaaaatgcacttt 45112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 32968594 - 32968459
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| ||||||||||||  | |||| ||  || ||| |||||||||||  | ||| |||| |||||||| |||||  ||| | ||| |||||||| |||    
T  32968594 ttgaccaagtcaaaattgctcaaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgca 32968495  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |  |||||| ||||| ||||||||||||||||||||    
T  32968494 acgttttgaaagttagggggggaaaagtgcacttta 32968459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 32973899 - 32974034
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| |||||||||||| || |||| ||  || ||| |||||||||||  | ||| |||| |||||||| |||||  ||| | ||| |||||||| |||    
T  32973899 ttgaccaagtcaaaattgtccaaaaggactgaaaatgcaaaggggctaaaacatagagggccaaaattgtggttttcatacatggggggccaaaatcgca 32973998  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |  |||||| ||||| ||||| ||||||||||||||    
T  32973999 acgttttgaaagttaggggggaaaaagtgcacttta 32974034  T

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Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 36249602 - 36249555
Alignment:
Q  111 gccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  36249602 gccaaaattgcaactttttgaaacttaaggggggaaaagtgcacttta 36249555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 24483200 - 24483146
Alignment:
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||||||||||||||||||||| | ||| | ||||||||||||||||||    
T  24483200 ttagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcacttta 24483146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 40469470 - 40469360
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||| | ||||||||||||||  |||||| |||| ||||| | || |||||||||| |||||||| |||| |    |||||| ||| ||||||    
T  40469470 gtcaaaattgatcaaaagaaccaaagatacaaagggactaaatcttatgtggttaaaattgtaatttttgtatttagaggatgaaaattacaaatttttg 40469371  T
Q  131 atagttaaggg 141  Q
    | |||||||||    
T  40469370 aaagttaaggg 40469360  T

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Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 18488247 - 18488331
Alignment:
Q  45 aaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    |||| |||||||||| ||||||| ||  |||||| |||| ||||||||||||||||||  |||||  | |||||||||| |||||    
T  18488247 aaaggaccaaagatgcaaaggggttatatcttagagggccaaaattgtagtttttgtatataggggactaaaattgcaacttttt 18488331  T

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Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 30569016 - 30568944
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||| ||||| || |||| |||||||||| ||||||||||| |||||||||   |||||| ||||||||||||    
T  30569016 gtcacaattggccaaaaggaccaaagatgcaaaggggctaaatcttaggggatcaaaattatagtttttgtac 30568944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 158
Target Start/End: Original strand, 42982655 - 42982755
Alignment:
Q  58 tgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 157  Q
    |||||| ||||||||||||  ||||  |||||||||||||||||    |||| ||||||||| ||| ||||| | | |||| || |||||||||||||||    
T  42982655 tgtaaatgggctaattcttgaggggtcaaaattgtagtttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcacttt 42982754  T
Q  158 a 158  Q
    |    
T  42982755 a 42982755  T

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Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 11456694 - 11456641
Alignment:
Q  105 tagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||| ||||||||||||| ||||||| | ||| |||| |||||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcacttta 11456641  T

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Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 5514261 - 5514367
Alignment:
Q  50 accaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaag 149  Q
    |||||||||| ||| ||||||| | |||| || | |||||||||||||||||| ||||   || |||||||||||||||| | | || |||||  |||||    
T  5514261 accaaagatgcaaatgggctaaattttagaggtc-aaaattgtagtttttgtatttagaaggctaaaattgcaagttttttaaaatt-aggggataaaag 5514358  T
Q  150 tgcacttta 158  Q
    |||||||||    
T  5514359 tgcacttta 5514367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 11288914 - 11288958
Alignment:
Q  114 aaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||||||||||||| ||||| ||| | ||||||||||||||    
T  11288914 aaaattgcaagtttttgaaagttaggggtgaaaaagtgcacttta 11288958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 4e-40; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 22630415 - 22630550
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||||||||  |||| |||| | |||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  22630415 ttgaataagtcaaaattgaccaaaaggaccaaagatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgca 22630514  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| ||||| || |||||||||||||||||    
T  22630515 agtttttgaaagttatggagggaaaagtgcacttta 22630550  T

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Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 18371562 - 18371427
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| | |||||||| ||| | ||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||    
T  18371562 ttgaataagtcaaaattgaccaaaaggatcaaagatgcaaatgtgctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgca 18371463  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| ||||| | ||||||||||||||||||    
T  18371462 agtttttgaaagttaggaggggaaaagtgcacttta 18371427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 18372420 - 18372544
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||||||||  ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  18372420 ttgaataagtcaaaattgaccaaaaggaccaaagatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgca 18372519  T
Q  123 agtttttgatagttaaggggggaaaa 148  Q
    ||||||||| | || |||||||||||    
T  18372520 agtttttgaaaatt-aggggggaaaa 18372544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 22629624 - 22629486
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||||||| ||    
T  22629624 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaggaggccaaaattaca 22629525  T
Q  123 agtttttgatagttaag---gggggaaaagtgcacttta 158  Q
    ||||||||| | |||||   ||||||||| |||||||||    
T  22629524 agtttttgaaaattaagggagggggaaaaatgcacttta 22629486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 7501815 - 7501950
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||||||||| ||||||||||  ||||| ||||| |||||||| |||||  ||||||||| ||||||||||||    
T  7501815 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgca 7501914  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||||  |||||||||||||||||||    
T  7501915 agtttttgaaagttagagggggaaaagtgcacttta 7501950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 11662552 - 11662656
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaac 160  Q
    |||||||||||||||| |||||| |||||| |||||||||||| ||| |||| |||||||||||||||||| |||||||||||||||| |||||||||||    
T  11662552 aaaggggctaattcttggggggccaaaattatagtttttgtacatagagagctaaaattgcaagtttttgaaagttaaggggggaaaaatgcactttaac 11662651  T
Q  161 cttaa 165  Q
    |||||    
T  11662652 cttaa 11662656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 31659781 - 31659625
Alignment:
Q  4 cgtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    ||||||||||||| || || ||||||| ||||||||||||| |||| | ||||  || || |||||||| ||||||||||| ||||||||||||||||||    
T  31659781 cgtggcatgccacgcatgcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgta 31659682  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaagggggg-aaaagtgcacttta 158  Q
    ||||||| | |||||||| |||||||||| ||||| |||||| ||||||||||||||    
T  31659681 cttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcacttta 31659625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 3227538 - 3227692
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggg-gctaaaattgtagtttttgta 102  Q
    |||||||||||  ||||| ||||||| ||||||||||| | |||| ||||||| || || |||||||| ||||||||| |||||| |||| ||||| |||    
T  3227538 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaa-ttgtggttttggta 3227636  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3227637 cttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcacttta 3227692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 42886257 - 42886388
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||  | |||||||| ||| ||||||| |||||||||||||||||||||||||||||| |||||| | ||||||||||| ||||||    
T  42886257 gtcaaaattgaccaaaatgatcaaagatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaaatttttg 42886356  T
Q  131 atagttaaggggggaaaagtgcactttaacct 162  Q
    | ||||| | || |||||||||||||||||||    
T  42886357 aaagttaggaggagaaaagtgcactttaacct 42886388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 7500592 - 7500453
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| | |||||||| ||||||||||| ||||||||||| |||||||| |||| | ||||||| |   ||||||||||    
T  7500592 ttgaataagtcaaaattgaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgca 7500493  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||||| ||||||| |||||||||||||||||| ||||    
T  7500492 agtttttgaaagttaag-ggggaaaagtgcactttagcctt 7500453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 31949479 - 31949325
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||| | |||| ||||||| || || |||||||| ||||||||||   ||||||| ||||| ||||    
T  31949479 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 31949380  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||||||||||||||||||||| | ||| || |||||||||||||||||    
T  31949379 ttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcacttta 31949325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 17781791 - 17781664
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||  | |||| ||||||| || || |||||||| |||||||||| | ||||||| ||||| |||||||||| | ||||||||||||||||||    
T  17781791 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttg 17781692  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | ||||| ||||||||||||||||||||    
T  17781691 aaagttagggggggaaaagtgcacttta 17781664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 31949746 - 31949900
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggg-gctaaaattgtagtttttgta 102  Q
    |||||||||||  ||||| ||||||| ||||||||||| | |||| ||||||| || || |||||||| ||||||||| |||||| |||| ||||| |||    
T  31949746 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaa-ttgtggttttggta 31949844  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
     |||||| ||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  31949845 tttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcacttta 31949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 127492 - 127340
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||| || ||  ||||||| ||||||||||||||| |||| ||||| ||||    
T  127492 gtggcatgccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaattgggctaaatcttagggggctaaa-ttgtggttttggtac 127394  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||  |||||||||||||||||||| |||| |||||||||||||||||||||    
T  127393 ttaggggaccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcacttta 127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 31 - 156
Target Start/End: Original strand, 14999126 - 14999249
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| | |||||||| ||||||||||| |||||||| || |||||||||||||||||| |||||| | |||||||||||| |||||    
T  14999126 gtcaaaattgacctaaaggaacaaagatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaag-ttttg 14999224  T
Q  131 atagttaaggggggaaaagtgcactt 156  Q
    | | || |||||||||||||||||||    
T  14999225 aaaatt-aggggggaaaagtgcactt 14999249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 43899606 - 43899466
Alignment:
Q  1 acgcgtggcatgccactcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttg 100  Q
    |||||||||||||||||||||||||||||||||||||||| || |||  | |||||||||||| | ||||||| |||| | || ||||||||| |||||     
T  43899606 acgcgtggcatgccactcagctttgactaagtcaaaattggccaaaaagatcaaagatgtaaatgtgctaatttttagagagccaaaattgtaattttta 43899507  T
Q  101 tacttagggagccaaaattgcaagtttttgatagttaaggg 141  Q
    || ||||     ||||||||||||||||||| |||||||||    
T  43899506 tatttagaagatcaaaattgcaagtttttgaaagttaaggg 43899466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 47369919 - 47369779
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| ||| ||| ||||||| ||||||||||| ||||| ||||| |||||| ||||||||||||||| |  || |||||||||    
T  47369919 ttgaataagtcaaaattgaccaaaataactaaagatgcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgca 47369820  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||||| ||||| |||   ||||||||| |||| ||||    
T  47369819 agtttttgaaagttaggggaaaaaaagtgcattttagcctt 47369779  T

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Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 47525311 - 47525465
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||| || || |||||||| ||||||||||   ||||||| |||||  |||    
T  47525311 gtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatac 47525410  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| || |||||||||||||||||| |||||  |||||||||||||||||||    
T  47525411 ttagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 47525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 11658479 - 11658382
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||||  ||| | ||||||||||||||||||| ||||| || ||||||||| |||||||| ||||||||||||||||||||| ||||    
T  11658479 aaaggggctaattcttgagggaccaaaattgtagtttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaattta 11658382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 3227264 - 3227111
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattctta-gggggctaaaattgtagtttttgta 102  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||| || || |||||||| ||||| |||||||||| |||| ||||| |||    
T  3227264 gtggcatgccaaatcagcgttgactaggtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggctaaa-ttgtggttttggta 3227166  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||||||||||||||||||| | || ||||||| |||||||||||||    
T  3227165 cttagggggccaaaattgcaagtttttgaaaatt-agggggggaaagtgcacttta 3227111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 21505542 - 21505419
Alignment:
Q  33 caaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgat 132  Q
    |||||||| || |||| |||||||||| ||||||||||| ||||| ||||  ||||||||||||||||||  | ||| |||||||| |||| |||||||     
T  21505542 caaaattgtccaaaaggaccaaagatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgtatatcgggggccaaaatcgcaactttttgaa 21505443  T
Q  133 agttaaggggggaaaagtgcacttta 158  Q
    |||||  |||||||||||||||||||    
T  21505442 agtta--gggggaaaagtgcacttta 21505419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 17782558 - 17782651
Alignment:
Q  65 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  17782558 gggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 17782651  T

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Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 30439321 - 30439455
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||||||||||||||||| | |||  ||| ||| || ||||||||||| ||||||||| |||||||||||||||||| || |||| |  |||||| | |    
T  30439321 ttgactaagtcaaaattgagcaaaatgaccgaaggtgcaaaggggctaaatcttaggggactaaaattgtagtttttgaacataggaaatcaaaatcgta 30439420  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    | ||||||| |||||||||| | |||||||||||||    
T  30439421 actttttgaaagttaaggggag-aaagtgcacttta 30439455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 20163585 - 20163659
Alignment:
Q  89 ttgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||| ||||    
T  20163585 ttgtagtttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcctt 20163659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 163
Target Start/End: Original strand, 128605 - 128704
Alignment:
Q  64 ggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||||| | ||||||||||   ||||||| ||||| |||||||||| | ||||||||||| ||||||| ||||| || ||||||||||||||||||||||    
T  128605 ggggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcactttaacctt 128704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  87 aattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcac 154  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||||||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 48934908 - 48935001
Alignment:
Q  65 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||||||| ||||   |||||| |||||||||||||||| | | ||||||| ||||||||||| ||||| ||| |||||| |||||||||    
T  48934908 gggctaattcttgggggatcaaaattttagtttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcacttta 48935001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 769543 - 769416
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||  | |||| | |||||||| ||| ||| ||||||| |||| || |||||| || ||||||||||||||  | ||||||||||||||||||    
T  769543 gtcaaaattgggcaaaaggatcaaagatgcaaatgggttaattctaagggagccaaaattataatttttgtacttaggatgtcaaaattgcaagtttttg 769444  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | | |||  || |||||| |||||||||    
T  769443 aaaattacaggtggaaaattgcacttta 769416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 14998107 - 14998048
Alignment:
Q  34 aaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgta 93  Q
    |||||||||| |||| |||||||||| ||||||||||| ||||||||||| |||||||||    
T  14998107 aaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgta 14998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 34174010 - 34174080
Alignment:
Q  87 aattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||||| |||||||||| |||||||||||||| |||||| || | |||||||||||||||||||||    
T  34174010 aattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-aggggggaaaagtgcacttta 34174080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 34351587 - 34351522
Alignment:
Q  66 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 131  Q
    |||||| ||||| |||| |||||||||||||| | ||||| | |||||||||||||||||||||||    
T  34351587 ggctaaatcttaaggggttaaaattgtagtttctatacttggagagccaaaattgcaagtttttga 34351522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 46482735 - 46482600
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |  ||| ||| ||||| | ||| |||||||||  ||||||| |||||||||||| ||||| | |||| || ||    
T  46482735 ttgaataagtcaaaattgaccaaaaggataaaaaatgcaaaggagataaatcttaggggattaaaattatagtttttgtacatagggggtcaaatttaca 46482636  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    | ||||||| | ||| | || ||||| |||||||||    
T  46482635 aatttttgaaaattaggaggagaaaaatgcacttta 46482600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 31661024 - 31661112
Alignment:
Q  75 ttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||| |||||||| |||||||||||| ||  | | ||||||||||| ||||||| |||||  | ||| ||||||||||||| ||||    
T  31661024 ttaggggactaaaattatagtttttgtacgtaaagggtcaaaattgcaaatttttgaaagttagagaggggaaagtgcactttagcctt 31661112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 5111492 - 5111440
Alignment:
Q  111 gccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||||  ||||||||||| | |||||||| ||||||||||||||| ||||    
T  5111492 gccaaaatcacaagtttttgaaacttaaggggtgaaaagtgcactttagcctt 5111440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 34352799 - 34352891
Alignment:
Q  73 tcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaaccttaa 165  Q
    |||||| |||| |||||| |||||| |||||||| ||  ||||||| | |||||||||| | |||  || | |||||||||||||| ||||||    
T  34352799 tcttagagggccaaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaaattagaggtgaaaaagtgcactttagccttaa 34352891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 4e-40; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 11437142 - 11437297
Alignment:
Q  4 cgtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    |||||||||||||| | || ||||||  ||||||||||||| |||| | |||||||||||| ||| ||| ||||||||||| ||||||||||||||||||    
T  11437142 cgtggcatgccacttaagcgttgactcggtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggccaaaattgtagtttttgta 11437241  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||| ||  |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  11437242 cttaagggaccaaaattgcaagtttttgaaagttaagggggaaaaagtgcacttta 11437297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 24422958 - 24422803
Alignment:
Q  4 cgtggcatgccactcag-ctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgta 102  Q
    ||||||||||||| ||| | ||||||| ||||||||||||| |||| | ||||  || || |||||||| ||||||||||| ||||||||||||||||||    
T  24422958 cgtggcatgccacacaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgta 24422859  T
Q  103 cttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  24422858 cttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcacttta 24422803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 43058918 - 43058785
Alignment:
Q  28 taagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttt 127  Q
    |||||||||||||||| |||| | |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  43058918 taagtcaaaattgaccaaaaggatcaaagatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagttt 43058819  T
Q  128 ttgatagttaaggggggaaaagtgcactttaacct 162  Q
    || | |||| |||||| ||||||| ||||||||||    
T  43058818 ttcaaagtt-agggggaaaaagtgtactttaacct 43058785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 24426038 - 24426179
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||||| ||||||||||||| |||| | ||||  || || |||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  24426038 ttgactaggtcaaaattgaccaaaagtatcaaatttgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgca 24426137  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctta 164  Q
    ||||||||| |||||  ||||| |||||||||||||||||||    
T  24426138 agtttttgaaagttagaggggggaaagtgcactttaacctta 24426179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 51684510 - 51684369
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||| ||||||  |||||||||| || |||| |||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||| ||||| ||||||    
T  51684510 tcagcgttgacttggtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaa 51684411  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||| | ||||||||||||||||||||||||||    
T  51684410 attgcaactttttaaaagttaaggggggaaaagtgcacttta 51684369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 11436199 - 11436040
Alignment:
Q  5 gtggcatgccactcag-ctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    ||||||||||||| || | ||||||  ||||||||||||| ||||||||||||||| ||| ||| ||| ||||||||||| ||||||||||||||| |||    
T  11436199 gtggcatgccacttaggcgttgactcggtcaaaattgaccaaaagaaccaaagatgcaaatgggttaaatcttagggggccaaaattgtagtttttatac 11436100  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||    ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  11436099 ttaaaaggccaaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcctt 11436040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 37526841 - 37526982
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||| | |||  |||||||||| ||||||||||| ||||||||| | |||||||| |||| | || |||||||||||||||||||    
T  37526841 ttgaataagtcaaaattgatcaaaaagaccaaagatgcaaaggggctaaatcttaggggcc-aaaattgtggtttctatatttagggagccaaaattgca 37526939  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaaccttaa 165  Q
    ||||||||| |||||||||||||||||| ||||||||||||||    
T  37526940 agtttttgaaagttaaggggggaaaagtacactttaaccttaa 37526982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 39153087 - 39153219
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |||||||||| ||||||| ||| |||||| |||  ||||||||||||||||||| || || ||||||||||||||||||||    
T  39153087 gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacataaggggccaaaattgcaagtttttg 39153186  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | | ||||||||| |||||||||||||||||||    
T  39153187 aaacttaagggggaaaaagtgcactttaacctt 39153219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 50680469 - 50680331
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| | |||||||| ||||||| ||| ||||||||| |||||||| |||||||| ||||||||| ||||||||||||    
T  50680469 ttgaataagtcaaaattgaccaaaaggatcaaagatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgca 50680370  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    ||||||||  ||||||| |||||||| |||||||||||||    
T  50680369 agtttttggaagttaag-ggggaaaaatgcactttaacct 50680331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 36612990 - 36612851
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| ||||| |||||||||| |||  |||||||||| |||||| |||| |||||||||| |||||||||||||||||||||||  || |||||||||||    
T  36612990 ttgaataagttaaaattgaccaaaatgaccaaagatgcaaagggactaaatcttagggggttaaaattgtagtttttgtactta-agatccaaaattgca 36612892  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    | ||||||| |||||||||||||||| ||||||||| ||||    
T  36612891 aatttttgaaagttaaggggggaaaaatgcactttagcctt 36612851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 45148710 - 45148584
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| || |||| |||||||||| ||||||| ||| ||||||||||  ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  45148710 gtcaaaattggccaaaaggaccaaagatgcaaaggggttaaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagtttttg 45148612  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | ||||||| ||| ||||||||||||||    
T  45148611 aaagttaagcgggaaaaagtgcacttta 45148584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 6 - 164
Target Start/End: Complemental strand, 52275124 - 52274965
Alignment:
Q  6 tggcatgccactcag-ctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtact 104  Q
    ||||||||||| ||| | ||||||| ||||||||||||| |||| | ||||  || || | |||||| ||||||||| | ||||||||||||||||||||    
T  52275124 tggcatgccacgcaggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatgaggctaaatcttaggggcccaaaattgtagtttttgtact 52275025  T
Q  105 tagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctta 164  Q
    ||||| | ||||||||||||||||||| ||||| ||||| |||||||||||||| |||||    
T  52275024 tagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcctta 52274965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 52828014 - 52828172
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||| || || |||||||| ||||||||||   ||||||| ||||| ||||    
T  52828014 gtggcatgccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 52828113  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    |||||||||||||||||||||||||||| | |||  |||||||||||||||||||||||    
T  52828114 ttagggagccaaaattgcaagtttttgaaaattagagggggaaaagtgcactttaacct 52828172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 39222436 - 39222572
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| ||||||||||||| || |||  |||||||||| ||| |||| || |||||| ||||||| |||||||||||| ||||||||| ||||||||||||    
T  39222436 ttgaataagtcaaaattgcccaaaaagaccaaagatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttagggggccaaaattgca 39222535  T
Q  123 agtttttgatagtt-aaggggggaaaagtgcacttta 158  Q
    ||||||||| |||| ||||||| ||||||||||||||    
T  39222536 agtttttgaaagttaaagggggtaaaagtgcacttta 39222572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 45149941 - 45150072
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggct-aaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    |||||||||| || |||| | |||||||| ||||||||||| ||||||||||   |||||||| ||||||||||||| || |||||||||||||||||||    
T  45149941 gtcaaaattggccaaaaggatcaaagatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaagttttt 45150040  T
Q  130 gatagttaaggggggaaaagtgcactttaacct 162  Q
    || |||| |||||||||||||||||||||||||    
T  45150041 gaaagtt-aggggggaaaagtgcactttaacct 45150072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 23980456 - 23980564
Alignment:
Q  50 accaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaag 149  Q
    |||||| ||| ||||||||||| ||||||| | | |||||| |||||||||||||||||||||||||||||||||||||| | |||||  ||||||||||    
T  23980456 accaaaaatgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaag 23980555  T
Q  150 tgcacttta 158  Q
    |||||||||    
T  23980556 tgcacttta 23980564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 45157180 - 45157311
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |||||||||| ||||||| ||| |||||  |||  ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  45157180 gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaagtttttg 45157279  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | | || ||||||| ||||||||||||| ||||    
T  45157280 aaactt-agggggggaaagtgcactttagcctt 45157311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 158
Target Start/End: Original strand, 51685739 - 51685863
Alignment:
Q  34 aaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgata 133  Q
    ||||||| || |||| |||||||||| ||||||||||| ||||||||||  ||||||||||||||||||| ||| | |||||||| |||| ||||||| |    
T  51685739 aaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaactttttgaaa 51685838  T
Q  134 gttaaggggggaaaagtgcacttta 158  Q
    ||||  |||||||||||||||||||    
T  51685839 gttagagggggaaaagtgcacttta 51685863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 52827477 - 52827345
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||  | |||| ||||||| || || |||||||| |||||||||| | ||||||| ||||| |||||||||| | ||||||||||||||||||    
T  52827477 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagtttttg 52827378  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | ||||| |||||||||||||||||||| ||||    
T  52827377 aaagttagggggggaaaagtgcactttagcctt 52827345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 36613867 - 36614002
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||| | |||| || |||| || |||| |||||| ||||||||||  ||||||||||||||||||||||||| ||||||||| ||    
T  36613867 ttgaataagtcaaaattgatcaaaaggactaaagttgcaaagaggctaaatcttagggggtcaaaattgtagtttttgtacttagggggccaaaattaca 36613966  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| | ||||| ||| |||||| |||||||||    
T  36613967 agtttttaaaagttaggggaggaaaaatgcacttta 36614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 39152061 - 39151930
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |||||||||| ||||||| ||| |||||  | |  ||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  39152061 gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagagtcaaaattgtagtttttgtacatagggggccaaaattacaagtttttg 39151962  T
Q  131 atagttaaggggggaaaagtgcactttaacct 162  Q
    | | ||||||||| |||| |||||||||||||    
T  39151961 aaacttaagggggaaaaaatgcactttaacct 39151930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 39699738 - 39699864
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |  |||| || || |||||||| ||||||||||| ||||||||||||| ||||||||||| | |||||||||||||| |||    
T  39699738 gtcaaaattgaccaaaaggattaaagttgcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaagttattg 39699837  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | |||| |||||||||||||||||||||    
T  39699838 aaagtt-aggggggaaaagtgcacttta 39699864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 35594353 - 35594215
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    ||||| |||||||||||| |  |||| |||||||||| ||||||||||| | ||||||| | ||||||||||||||  ||||||||| | ||||||||||    
T  35594353 ttgaccaagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttaggggtc-aaaattgtagttttaatacttaggg-gtcaaaattgca 35594256  T
Q  123 agtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||||| ||||| ||| |||||||||||||||| ||||    
T  35594255 agtttttgaaagttaggggtggaaaagtgcactttagcctt 35594215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 41364985 - 41364832
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||| | |||  ||||||| || || |||||||| ||||||||||   ||||||| ||||| |||     
T  41364985 gtggcatgccaaatcagcgttgactaggtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtat 41364886  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  41364885 ttagggggccaaaattgcaagtttttgaaagtt-aggggagaaaagtgcacttta 41364832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 52276103 - 52276265
Alignment:
Q  1 acgcgtggcatgccactca-gctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagttttt 99  Q
    |||||||||||||||  || || ||||||| ||||||||||| | |||| | ||||  || || |||||||| ||||||||| ||||| || ||||||||    
T  52276103 acgcgtggcatgccatgcaagcgttgactaggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggggactaaatttatagttttt 52276202  T
Q  100 gtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    |||||||||| ||||||||| ||| ||||||| |||||   |||| |||||||||||||||||    
T  52276203 gtacttagggggccaaaattacaaatttttgaaagttagaagggggaaagtgcactttaacct 52276265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 35067003 - 35067100
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||| | ||||||||| ||||||||||||||||| | ||||| |||||||| |||| ||||||| | ||||||||||||||||||||||||    
T  35067003 aaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcacttta 35067100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 33088600 - 33088720
Alignment:
Q  43 cgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggg 142  Q
    |||||||||||||| || ||||||||||| |||||||| |  ||||||||||||||||||||||  | | |||||||||||||||||||  ||||  | |    
T  33088600 cgaaagaaccaaagttgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaagtttttgaatgttagagag 33088699  T
Q  143 ggaaaagtgcactttaacctt 163  Q
    |||||||||||||||| ||||    
T  33088700 ggaaaagtgcactttagcctt 33088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 44404572 - 44404440
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||  |||||||||| |||  |||||| | ||||||||| |||||| |||||||||||||||||| || |||||||| ||||||||    
T  44404572 gtcaaaattgaccaaaatgaccaaagatgcaaattggctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagtttttg 44404473  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | ||||| | ||| ||||||||| |||| ||||    
T  44404472 aaagttatgagggaaaaagtgcattttagcctt 44404440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 43059969 - 43060104
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||||||||| ||| | ||||| ||||| ||||  |||||||||||||||||||||| || | ||||||| ||    
T  43059969 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatttca 43060068  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    | ||||||| |||||  ||||| ||||| |||||||    
T  43060069 aatttttgaaagttagagggggtaaagtacacttta 43060104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 35595135 - 35595291
Alignment:
Q  4 cgtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattg-tagtttttgt 101  Q
    ||||||||||||  ||||| ||||||  ||||||||||||| |||| |||||||||| ||||||||||| ||||| ||||| ||||||| |||||||| |    
T  35595135 cgtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctta-ggggccaaaattgttagtttttat 35595233  T
Q  102 acttagggagccaaaattgc-aagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || ||||| | ||||||||| |||||||| | |||||  ||||||||||| |||||||    
T  35595234 acatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacacttta 35595291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 41366088 - 41366233
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||| ||||||| ||||||| ||  | |||| ||||||| || || |||||||| ||||||||||||||| |||| |||||  |||||| || || |||    
T  41366088 tcagcgttgactaggtcaaaagtggtcaaaaggaccaaagttgcaatggggctaaatcttagggggctaaa-ttgtggttttgatacttaaggggctaaa 41366186  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||||| |||||||| ||||| | |||||||||||||||||| ||||    
T  41366187 attgcatgtttttgaaagttaggaggggaaaagtgcactttagcctt 41366233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 14999360 - 14999288
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| |||| ||||||||||||| |||||||    
T  14999360 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacacttta 14999288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 39698692 - 39698561
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |  |||| || || | |||||| |||||| || | |||||| |||||| ||||||||||| |||||||||| ||||||||     
T  39698692 gtcaaaattgaccaaaaggattaaagttgcaacgaggctaaatcttagtggcc-aaaattatagtttctgtacttagggggccaaaattgaaagttttta 39698594  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | |||||||||||| ||||||||||||| ||||    
T  39698593 aaagttaaggggggtaaagtgcactttagcctt 39698561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 43378684 - 43378815
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||| |||| |||| |  ||||||| ||||| ||||| ||||||| ||  ||||||||| |||||||||||||||   |||||||| |||||||||    
T  43378684 gtcaaaatcgaccaaaaggattaaagatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattgtaagtttttg 43378783  T
Q  131 atagttaaggggggaaaagtgcactttaacctt 163  Q
    | |||||| | | ||||||||||||||||||||    
T  43378784 aaagttaa-gagagaaaagtgcactttaacctt 43378815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 159
Target Start/End: Complemental strand, 45156179 - 45156051
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||  |||||||||  |||| || ||| |||||| ||| |||||||||||||||||||| |||   | |||||||| |||||||||    
T  45156179 gtcaaaattgaccaaaaagaccaaagatacaaagaggttaaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaaattgtaagtttttg 45156080  T
Q  131 atagttaaggggggaaaagtgcactttaa 159  Q
    | | ||||||| ||||||||| |||||||    
T  45156079 aaacttaagggaggaaaagtgaactttaa 45156051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 50681632 - 50681702
Alignment:
Q  88 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||||||| || |||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  50681632 attgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaagaggggaaaagtgcacttta 50681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 147
Target Start/End: Original strand, 7675450 - 7675546
Alignment:
Q  51 ccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaa 147  Q
    ||||||||| ||||||||||| ||||||||||  |||||| || ||||| ||||||||  | ||||||||||||||||||| |||||| || |||||    
T  7675450 ccaaagatgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagtttttgaaagttaaaggtggaaa 7675546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 7674602 - 7674531
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||||||||||||||||||||  |||||||||||||||||| | |||| |||||||||||| ||||||||    
T  7674602 aaaattgtagtttttgtacttaggg-cccaaaattgcaagtttttaaaagtt-aggggggaaaagggcacttta 7674531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 25652852 - 25652744
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| ||||||||||||| || |||  |||||||||| ||| ||||||| |||||| |||| ||| || || |||||||||||| ||   ||||||||||    
T  25652852 ttgaataagtcaaaattggccaaaatgaccaaagatgcaaatgggctaaatcttagcgggccaaatttataatttttgtacttaagggatcaaaattgca 25652753  T
Q  123 agtttttga 131  Q
    |||||||||    
T  25652752 agtttttga 25652744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 7983179 - 7983049
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |  |||  || || |||| ||| ||||||||||  |||||||| |||||  ||| ||||| |||||||||||||||| |||    
T  7983179 gtcaaaattgaccaaaaggatgaaatttgcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaagttgttg 7983080  T
Q  131 atagttaaggggggaaaagtgcactttaacct 162  Q
    | |||| | ||| |||||||||||||||||||    
T  7983079 aaagtt-acgggagaaaagtgcactttaacct 7983049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 40384855 - 40384724
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| || |||| |||||||||| |||| |||||| | |||||||   ||||||||||||||||||| ||||   | |||||||||| ||||||    
T  40384855 gtcaaaattggccaaaaggaccaaagatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaactttttg 40384756  T
Q  131 atagtt-aaggggggaaaagtgcactttaacc 161  Q
    | | || ||| ||  |||||||||||||||||    
T  40384755 aaaattaaagaggaaaaaagtgcactttaacc 40384724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 11190461 - 11190388
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||||||||  |||||| |||||||||||| ||||| | | |||||||| |||||||||||||||    
T  11190461 aaaattgcagtttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcacttta 11190388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 16290205 - 16290124
Alignment:
Q  50 accaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttga 131  Q
    |||||| ||||||||||| |||||||| || || |||||||||||||||| ||| || ||  |||||||||||| |||||||    
T  16290205 accaaatatgtaaaggggttaattcttgggaggttaaaattgtagtttttatacataagggaccaaaattgcaactttttga 16290124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 126
Target Start/End: Original strand, 44411937 - 44412032
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtt 126  Q
    |||||||||| |  |||| | ||||| || |||||| |||| |||||  ||| ||||||||||||||||||||||||||  | |||||||||||||    
T  44411937 gtcaaaattggcaaaaaggatcaaagttgcaaagggcctaaatcttaaaggggtaaaattgtagtttttgtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 46066617 - 46066530
Alignment:
Q  66 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 156  Q
    |||||| ||||||||| ||||||||||||||||||||| || || || ||||| |||| ||||||| |||||  || ||||||||||||||    
T  46066617 ggctaaatcttagggg-ctaaaattgtagtttttgtacataaggggctaaaatcgcaactttttgaaagtta--ggaggaaaagtgcactt 46066530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 30249447 - 30249589
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||| ||||||||||||||||||| | |||  | |||||||  ||| | ||||| ||||| ||||  ||||||||||||||||||| ||      ||||    
T  30249447 tcagcgttgactaagtcaaaattgatcaaaaagatcaaagatacaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacataaaagatcaaa 30249546  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcactttaa 159  Q
    ||| ||| ||||||| ||||| || ||||| ||||||||||||    
T  30249547 attacaactttttgaaagttacggagggaagagtgcactttaa 30249589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 14999983 - 15000058
Alignment:
Q  88 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||| ||||||||||||||   ||||||||||||||||| | ||||| || || ||||||| |||||| ||||    
T  14999983 attgtagattttgtacttaggggatcaaaattgcaagtttttaaaagttagggaggaaaaagtgaactttagcctt 15000058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 39221405 - 39221356
Alignment:
Q  115 aaattgcaagtttttgatagtta-aggggggaaaagtgcactttaacctt 163  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||| ||||    
T  39221405 aaattgcaagtttttgaaagttagaggggggaaaagtgcaatttagcctt 39221356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 39221445 - 39221404
Alignment:
Q  30 agtcaaaattgaccgaaagaaccaaagatgtaaaggggctaa 71  Q
    |||||||||||||| |||| |||||||||| |||||||||||    
T  39221445 agtcaaaattgaccaaaaggaccaaagatgcaaaggggctaa 39221404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 61403 - 61557
Alignment:
Q  5 gtggcatg-ccactcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||| ||| ||||| ||||||  ||||||||||||| |||| |||||||||| ||| ||||||| || |||||||| |||||| ||||||||||||    
T  61403 gtggcatgtccagtcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatagtttttgtac 61502  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| || |||||||||||||||||| | ||||||| ||||||||||||||||    
T  61503 ttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcacttta 61557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 60251 - 60093
Alignment:
Q  1 acgcgtggcatgc-cactcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagttttt 99  Q
    ||||||||||||  || ||||| ||||||  ||||||||||||| |||  |||||||||| ||||||||||| || |||||||  |||||||||||||||    
T  60251 acgcgtggcatgttcaatcagcattgacttggtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtcaaaattgtagttttt 60152  T
Q  100 gtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
     ||| ||||| | ||||||||||||||||| | |||||  || ||||||||||||||||    
T  60151 atacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcacttta 60093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 7316257 - 7316392
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||||   || |||||| ||||||||||||    
T  7316257 ttgaataagtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaaggggccaaaattgtggtttcaatatttagggggccaaaattgca 7316356  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| ||||||||||||||||||||||||||    
T  7316357 agtttttgaaagttaaggggggaaaagtgcacttta 7316392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 1829574 - 1829704
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||  |||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||     
T  1829574 gtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaagttttta 1829673  T
Q  131 atagttaaggggggaaaagtgcactttaacc 161  Q
    | ||||| ||||  |||||||||||||||||    
T  1829674 aaagttagggggaaaaaagtgcactttaacc 1829704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 7315017 - 7314883
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||  |||||||||| ||||||||||| ||||||||||  |||||||| |||||  ||||||||| ||||||||||||    
T  7315017 ttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggtcaaaattgttgttttgatacttaggg-gccaaaattgca 7314919  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||| |||||  |||||||||||||||||||    
T  7314918 agtttttgaaagttagagggggaaaagtgcacttta 7314883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 8659422 - 8659268
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||| || || |||||||| ||||||||||   ||||||| ||||| ||||    
T  8659422 gtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtac 8659323  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  8659322 ttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcacttta 8659268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 23 - 158
Target Start/End: Original strand, 27322031 - 27322165
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||||| ||||||||| || | |||| || ||| | | ||||||||||||||||||||||  |||||||| ||||| |||||||||| ||||||||||||    
T  27322031 ttgactgagtcaaaatagagcaaaaggacgaaataagcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattgca 27322130  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || |||||| || | |||||||||||||||||||||    
T  27322131 agattttgaaagat-aggggggaaaagtgcacttta 27322165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 16704522 - 16704595
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  16704522 aaaattgtagtttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcacttta 16704595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 3721769 - 3721610
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||| || || |||||||| ||||| ||||   ||||| | ||||| ||||    
T  3721769 gtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaaggggtctaaattatggttttggtac 3721670  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    |||||| | ||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  3721669 ttagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctt 3721610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 10784702 - 10784595
Alignment:
Q  52 caaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggg-gggaaaagt 150  Q
    ||||| || ||||||||||| |||| |||||| ||||||||||||||| ||||||||| |  |||||||||||||||| | ||||||||| |||||||||    
T  10784702 caaagttgcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagtttttaaaagttaagggagggaaaagt 10784603  T
Q  151 gcacttta 158  Q
    ||||||||    
T  10784602 gcacttta 10784595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 27437958 - 27437831
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| || |||| ||||||| || ||||| ||||| ||||||||||  ||||||||||||||| |   ||||| ||||||||||||| |||||     
T  27437958 gtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaactttttt 27437859  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | |||||||||| |||||||||||||||    
T  27437858 aaagttaaggggagaaaagtgcacttta 27437831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 34834523 - 34834681
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||| ||||||||||  | |||| ||||||| || || |||||||| ||||||||||   ||||||| |||||  |||    
T  34834523 gtggcatgccaaatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatac 34834622  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaacct 162  Q
    |||||    ||||||||||||||||||| ||||| || |||||||||||||||||||||    
T  34834623 ttaggagatcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttaacct 34834681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 8821989 - 8821876
Alignment:
Q  45 aaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg 144  Q
    |||| ||||||| || || || ||||| ||||||||||   ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||  |||||    
T  8821989 aaaggaccaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttgaaagttagaggggg 8821890  T
Q  145 aaaagtgcacttta 158  Q
    ||||||||||||||    
T  8821889 aaaagtgcacttta 8821876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 14822453 - 14822366
Alignment:
Q  68 ctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcact 155  Q
    |||| ||||||||||| ||||||||||||| | |||||| || ||||||||||||||||||||| | |||||||| ||||||||||||    
T  14822453 ctaaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcact 14822366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 6842240 - 6842381
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||||  |||||||||| || |||| | |||||||| |||  | |||| | ||| ||  |||||||||||||||||| || ||||| ||||||    
T  6842240 tcagctttgacttggtcaaaattggccaaaaggatcaaagatgcaaacagactaaattttaaggaactaaaattgtagtttttgcacatagggggccaaa 6842339  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||||| | |||  |||||||||||||||||||    
T  6842340 attgcaactttttgaaacttagagggggaaaagtgcacttta 6842381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 8822798 - 8822891
Alignment:
Q  65 gggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||||||||   ||||||| ||||| |||||||||| | ||||||||||||||||||| |||||| | |||||||||||||||||    
T  8822798 gggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcacttta 8822891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 8660161 - 8660306
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||| ||||||  ||||||||||  | |||| | ||||| || || || ||||| ||||||||||   ||||||| ||||| |||||||||| | ||||    
T  8660161 tcagcgttgacttggtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttaggg-gtcaaa 8660259  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcactttaacctt 163  Q
    ||||||||||||||| ||||| | |||||||||||||||||| ||||    
T  8660260 attgcaagtttttgaaagttaggaggggaaaagtgcactttagcctt 8660306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 29473177 - 29473075
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactttaac 160  Q
    |||||||| ||||||| | |||| ||||||||  ||||||| | |||||| |||||||||||| ||||| | | |||||||||||||||||||||| |||    
T  29473177 aaaggggccaattcttggagggccaaaattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcacttgaac 29473078  T
Q  161 ctt 163  Q
    |||    
T  29473077 ctt 29473075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 160
Target Start/End: Complemental strand, 5658886 - 5658757
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| | ||||| || ||| ||||||| ||||| |||   ||||||||||||||||||| |||||| | ||||||  || |||||     
T  5658886 gtcaaaattgaccaaaaggatcaaagttgcaaatgggctaaatcttaagggatcaaaattgtagtttttgtacatagggaactaaaattataacttttta 5658787  T
Q  131 atagttaaggggggaaaagtgcactttaac 160  Q
    | | |||||||||||||| |||||||||||    
T  5658786 aaacttaaggggggaaaaatgcactttaac 5658757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 16703666 - 16703573
Alignment:
Q  62 aaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||| ||| | |||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||| || ||  |||||||||||||||||||    
T  16703666 aaggggttaaattttagggggctaaaattgtagtttttgtatttatgga-tcaaaattgcaagtttttgaaagata--gggggaaaagtgcacttta 16703573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 10785905 - 10786000
Alignment:
Q  52 caaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaa 148  Q
    ||||| || ||||||||||| ||||| |||| |||||||||||||||||||||||||| |  |||||||||| ||||| | |||| |||||||||||    
T  10785905 caaagttgcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattgcaaatttttaaaagtt-aggggggaaaa 10786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 14823546 - 14823674
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| ||||||  || | || || ||  |||| ||||||||||| ||||||||||||| |||||||| || || ||||||||||||||||     
T  14823546 gtcaaaattgaccaaaagaattaaggttgcaacggttctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagtttttt 14823645  T
Q  131 atagttaaggggg-gaaaagtgcacttta 158  Q
    | | |||||||||  ||||||||||||||    
T  14823646 aaaattaagggggaaaaaagtgcacttta 14823674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 17496936 - 17496816
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttaggggg-ctaaaattgtagtttttgtacttagggagccaaaattgc 121  Q
    |||| |||||||||||||| | |||| |||||||||| |||| || ||| |||||||||| | ||||||| ||||||||||||||| | |  |||||||     
T  17496936 ttgaataagtcaaaattgatcaaaaggaccaaagatgcaaagaggttaaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaattgt 17496837  T
Q  122 aagtttttgatagttaagggg 142  Q
    |||||||||| ||||| ||||    
T  17496836 aagtttttgaaagttaggggg 17496816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 26575025 - 26575131
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| |  |||| | ||||| || ||||| | ||| ||||||||||| |||||||||||||||||||||| || |  |||||||||||||||||    
T  26575025 gtcaaaattggcaaaaaggatcaaagttgcaaaggagttaaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaagtttttg 26575124  T
Q  131 atagtta 137  Q
    | |||||    
T  26575125 aaagtta 26575131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 6840345 - 6840199
Alignment:
Q  8 gcatgccactcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttag 107  Q
    |||||||||||||  |||||| ||| |||||||  | |||| | |||||||| ||||||  ||| |||||| |||  |||||| ||||||||||| |||     
T  6840345 gcatgccactcagtgttgactgagttaaaattggtcaaaaggatcaaagatgcaaagggattaaatcttagagggtcaaaattatagtttttgtatttaa 6840246  T
Q  108 ggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcactt 156  Q
    || |||||||| |||| ||||||| | |||||||||  |||||||||||    
T  6840245 ggggccaaaatcgcaactttttgaaacttaaggggg--aaagtgcactt 6840199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 3722533 - 3722605
Alignment:
Q  86 aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| ||||| |||||||| | | ||||||||||||||||||| ||||| || |||||||||||||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcacttta 3722605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 3333018 - 3333129
Alignment:
Q  52 caaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtg 151  Q
    ||||| || ||||||||||| | |||| ||| |||||||||||||||||||| ||||| |||||||| |||| ||||| | | |||   |||||||||||    
T  3333018 caaagttgcaaaggggctaaattttagagggttaaaattgtagtttttgtacatagggggccaaaatcgcaactttttcaaacttagaaggggaaaagtg 3333117  T
Q  152 cactttaacctt 163  Q
    || |||| ||||    
T  3333118 caatttagcctt 3333129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 12350897 - 12350832
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttt 127  Q
    ||||||||||| |||||||||| |||||||||||||||| ||| ||||| | |||||||||||||||    
T  12350897 aaaggggctaaatcttagggggttaaaattgtagtttttatacataggg-gtcaaaattgcaagttt 12350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 27318416 - 27318318
Alignment:
Q  61 aaaggggctaattcttagggggcta--aaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||||||||||     ||||||| ||||| |||||||||| |||||||||||||| |||||| || | |||||| ||| ||||||||||    
T  27318416 aaaggggctaattcttaggggggggggaaattgtggttttggtacttagggggccaaaattgcaagattttgaaagat-agggggaaaaggtgcacttta 27318318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 3333488 - 3333566
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgt 101  Q
    |||||||||||||||||| || |||| | ||||| ||  |||||||||| || ||| ||| ||||||||||||||||||    
T  3333488 ttgactaagtcaaaattggccaaaaggatcaaagttgcgaaggggctaaatcatagagggttaaaattgtagtttttgt 3333566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 26717137 - 26717182
Alignment:
Q  113 caaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||| ||| | ||||||||||||||||||||||||    
T  26717137 caaaattgcaagtttctgaaacttaaggggggaaaagtgcacttta 26717182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 158
Target Start/End: Complemental strand, 26574748 - 26574622
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||  |||  | ||||| || ||||||||||| ||||| |||   ||||| ||||||||||||||||| |   ||||||||||||||||||    
T  26574748 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaagggatcaaaat-gtagtttttgtacttagaggttcaaaattgcaagtttttg 26574650  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | |||||  || || ||| |||||||||    
T  26574649 aaagttagaggtgggaaattgcacttta 26574622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 26949156 - 26949263
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||| | |||  || ||||||| ||||||| ||| ||||||  |  |||||||||||||||| ||||||||  | ||||||||||| ||||||    
T  26949156 gtcaaaattgatcaaaaacactaaagatgcaaaggggttaaatcttagaagattaaaattgtagtttttatacttagg--ggcaaaattgcaa-tttttg 26949252  T
Q  131 atagttaaggg 141  Q
    | |||||||||    
T  26949253 aaagttaaggg 26949263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 17570 - 17473
Alignment:
Q  61 aaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||||    
T  17570 aaaggggataattcttggggggccaaaattgtagtttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcacttta 17473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 18747 - 18874
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||  |  |||| || || |||||||| | ||| ||||| |||||| |||||||||||| |||||  |||||||||||| |||||     
T  18747 gtcaaaattgaccaaaatgattaaagttgcaatggggctaaattttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaaattttta 18846  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | ||||| | ||| ||||||||||||||    
T  18847 aaagttaggagggaaaaagtgcacttta 18874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 158
Target Start/End: Complemental strand, 19626 - 19491
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgca 122  Q
    |||| |||||||||||||||| |||  | |||||||| ||||||| ||| |||||||||   ||||||||||||||| ||||||||| ||||||||||||    
T  19626 ttgaataagtcaaaattgaccaaaatgatcaaagatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgca 19527  T
Q  123 agtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || |||||| | |||||||||||||| |||||||||    
T  19526 aggttttgaaaattaaggggggaaaaatgcacttta 19491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 5397 - 5536
Alignment:
Q  19 agctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaat 118  Q
    ||||||||||  ||||||||| ||| |||| | ||||  ||||| |||||||| ||||| ||||  |||||||||||||||||||||| || | ||||||    
T  5397 agctttgacttggtcaaaattaaccaaaaggatcaaatttgtaatggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaat 5496  T
Q  119 tgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||| | ||| ||||||||||||||||||||    
T  5497 tgcaagtttttgaaaattagggggggaaaagtgcacttta 5536  T

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Target: scaffold0294; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 4584 - 4445
Alignment:
Q  19 agctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaat 118  Q
    ||||||||||  |||||||| |||| |||  ||||||  ||||| |||||||| | |||||||| |||||||||| |||||||||||| || || |||||    
T  4584 agctttgacttggtcaaaatcgaccaaaatgaccaaatttgtaatggggctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaat 4485  T
Q  119 tgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || |||||||||| | ||| ||||| ||| ||||||||||    
T  4484 tgtaagtttttgaaaattaggggggaaaatgtgcacttta 4445  T

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Target: scaffold2034 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 342 - 236
Alignment:
Q  52 caaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtg 151  Q
    |||| ||| ||||||||||||||||||||| | |||||| |||||||||||| |||||  |||||||||||| ||||||| |||||||||||| ||||||    
T  342 caaatatgcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtg 243  T
Q  152 cacttta 158  Q
    |||||||    
T  242 cacttta 236  T

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Target: scaffold2034; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 963 - 1058
Alignment:
Q  45 aaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagg 140  Q
    |||| |||||| ||| |||||||||||||||| |||||| |||||| |||||||||||| || ||  |||||||||||| ||||| | ||||||||    
T  963 aaaggaccaaatatgcaaaggggctaattcttggggggccaaaattatagtttttgtacataagggaccaaaattgcaactttttaaaagttaagg 1058  T

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Target: scaffold1303 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 1596 - 1442
Alignment:
Q  5 gtggcatgccac-tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtac 103  Q
    |||||||||||  ||||| ||||||  ||||||||||||| |||| |||||||||| ||| ||||||| ||||||||||  |||||| |||||||| |||    
T  1596 gtggcatgccaaatcagcattgacttggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattatagtttttatac 1497  T
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
     ||||| | ||||||||||||||||| | |||||  ||||||||||| |||||||    
T  1496 atagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacacttta 1442  T

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Target: scaffold0003 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 49404 - 49531
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    |||||||||| || |||| ||||||| || ||||| ||||| ||||||||||  ||||||||||||||| |   ||||| ||||||||||||| |||||     
T  49404 gtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaactttttt 49503  T
Q  131 atagttaaggggggaaaagtgcacttta 158  Q
    | |||||||||| |||||||||||||||    
T  49504 aaagttaaggggagaaaagtgcacttta 49531  T

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Target: scaffold0586 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 162
Target Start/End: Complemental strand, 6459 - 6342
Alignment:
Q  45 aaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaagggggg 144  Q
    |||| |||||||||| |||  |||||| ||||||||||  ||||||||||||||||||| ||||| || ||||| | || ||||||| | ||||||| ||    
T  6459 aaaggaccaaagatgcaaaaaggctaaatcttagggggtcaaaattgtagtttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcgg 6360  T
Q  145 aaaagtgcactttaacct 162  Q
    ||||||||||||||||||    
T  6359 aaaagtgcactttaacct 6342  T

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Target: scaffold0586; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 158
Target Start/End: Original strand, 8995 - 9123
Alignment:
Q  28 taagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttt 127  Q
    |||||||||||||  | |||| | |||||||| |   ||||||| ||||||||| | ||||||||||||||||||| ||||  || |||||  ||| |||    
T  8995 taagtcaaaattggtcaaaaggatcaaagatgcatgagggctaaatcttaggggcc-aaaattgtagtttttgtacataggaggcaaaaatcacaacttt 9093  T
Q  128 ttgatagttaaggggggaaaagtgcacttta 158  Q
    |||| | |||||| || ||||||||||||||    
T  9094 ttga-aattaaggaggaaaaagtgcacttta 9123  T

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Target: scaffold0632 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 3300 - 3405
Alignment:
Q  52 caaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtg 151  Q
    ||||| || ||||||||||| ||||||||| | |||||| |||||||||||| || || | |||||||| |||||||||| || ||||||||||||||||    
T  3300 caaagttgcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaagtttttgaaag-taaggggggaaaagtg 3398  T
Q  152 cacttta 158  Q
    |||||||    
T  3399 cacttta 3405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 2472 - 2562
Alignment:
Q  67 gctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaag-tttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||| || |||||||| ||||| || |||||||||||||||| | |||||||||||| ||||||| |||||  |||||||||||||||||||    
T  2472 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcacttta 2562  T

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Target: scaffold0093; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 7095 - 7185
Alignment:
Q  67 gctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaag-tttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||| || |||||||| ||||| || |||||||||||||||| | |||||||||||| ||||||| |||||  |||||||||||||||||||    
T  7095 gctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcacttta 7185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 49109 - 49182
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||||  ||||||||  ||||||||||||||||||| | ||||||||| ||||||||||| ||||    
T  49109 aaaattgtagttttaatacttaggaggccaaaattgcaagtttttaaaagttaagggtggaaaagtgcaattta 49182  T

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Target: scaffold0045; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 136
Target Start/End: Complemental strand, 48436 - 48334
Alignment:
Q  31 gtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttg 130  Q
    ||||||||||||| |||| |||||||||| ||||||  ||| ||||||||| | |||||| |||||||||||| |||||  |  ||||||||||||||||    
T  48436 gtcaaaattgacc-aaaggaccaaagatgcaaagggaataaatcttaggggaccaaaattatagtttttgtacataggggtc--aaattgcaagtttttg 48340  T
Q  131 atagtt 136  Q
    | ||||    
T  48339 agagtt 48334  T

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Target: scaffold0321 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 18831 - 18731
Alignment:
Q  58 tgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 157  Q
    |||||||||| ||||||||||| ||  ||||||||||||||||| | ||||  | |||||| |||| ||||| | ||||||| ||| |||||||||||||    
T  18831 tgtaaaggggttaattcttaggaggtcaaaattgtagtttttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcacttt 18732  T
Q  158 a 158  Q
    |    
T  18731 a 18731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 3770 - 3699
Alignment:
Q  66 ggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagtta 137  Q
    |||||| ||||||||| |||||||| |||||| | |||| |||| ||||||||||||||||||||| |||||    
T  3770 ggctaaatcttaggggactaaaattatagtttctttactcagggggccaaaattgcaagtttttgaaagtta 3699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 4755 - 4827
Alignment:
Q  85 aaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||||||||||| |||| |||||| |||||||||||| |||||| | |||| |||| || |||||||||||||    
T  4755 aaaattgtagtttctgtatttagggggccaaaattgcatgtttttaaaagtt-agggagggaaagtgcacttta 4827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 158
Target Start/End: Original strand, 76 - 217
Alignment:
Q  17 tcagctttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaa 116  Q
    ||||||||||| || ||||||||| || |||| ||  ||  || || ||||||||  | |||||||| |||||||| |||||  ||| | ||| ||||||    
T  76 tcagctttgaccaattcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtggttttcatacatggggggccaaa 175  T
Q  117 attgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    || ||||  |||||| ||||| ||||||||||||||||||||    
T  176 atcgcaacgttttgaaagttagggggggaaaagtgcacttta 217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 37244 - 37179
Alignment:
Q  64 ggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagttttt 129  Q
    |||||||| || |||||||| |||||||| |||||||||||||||| | ||||||||||| |||||    
T  37244 ggggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttt 37179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 23152 - 23084
Alignment:
Q  88 attgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    ||||| ||||| |||||||| | | ||||||||||||||||||| |||||  |||||||||||||||||||    
T  23152 attgttgttttggtacttagagggacaaaattgcaagtttttgaaagtta--gggggaaaagtgcacttta 23084  T

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Target: scaffold0186; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 23934 - 23988
Alignment:
Q  104 ttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttta 158  Q
    |||||||||||||||||||||||||||| ||||| || |  ||||||||||||||    
T  23934 ttagggagccaaaattgcaagtttttgaaagttagggagaaaaaagtgcacttta 23988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 7407 - 7518
Alignment:
Q  52 caaagatgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtg 151  Q
    ||||| || ||||||||||| ||||||||||  ||||||||||||| ||||| ||||| | |||||| | || ||||| | | |||  |||||| |||||    
T  7407 caaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaactttttcaaacttagagggggacaagtg 7506  T
Q  152 cactttaacctt 163  Q
    ||||||| ||||    
T  7507 cactttagcctt 7518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 7882 - 7957
Alignment:
Q  23 ttgactaagtcaaaattgaccgaaagaaccaaagatgtaaaggggctaattcttagggggctaaaattgtagtttt 98  Q
    |||||||||||||||||| || |||| | ||||| || ||||||||||| || ||||||| ||||||| |||||||    
T  7882 ttgactaagtcaaaattggccaaaaggatcaaagttgcaaaggggctaaatcatagggggttaaaattctagtttt 7957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 7640 - 7541
Alignment:
Q  58 tgtaaaggggctaattcttagggggctaaaattgtagtttttgtacttagggagccaaaattgcaagtttttgatagttaaggggggaaaagtgcacttt 157  Q
    ||||||| |||||| || ||||| |||||||||||||||||||| | ||||| | |||| || ||| ||||| | | |||  ||||| ||||||||||||    
T  7640 tgtaaagaggctaaatcgtagggagctaaaattgtagtttttgttcatagggggtcaaatttacaactttttcaaacttataggggg-aaagtgcacttt 7542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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