View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13632_low_11 (Length: 358)
Name: NF13632_low_11
Description: NF13632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13632_low_11 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0373 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 290; Significance: 1e-163; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 17 - 342
Target Start/End: Original strand, 25568195 - 25568521
Alignment:
| Q |
17 |
atgaacattcttagaggatatagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25568195 |
atgaacattcttagaggatatagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagc |
25568294 |
T |
|
| Q |
117 |
aagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtt |
216 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25568295 |
aagcaagccctaaagatgattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtt |
25568394 |
T |
|
| Q |
217 |
tgata-nnnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctc |
315 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25568395 |
tgataggggggggtaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctc |
25568494 |
T |
|
| Q |
316 |
taaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
||||||||||||||||| ||||||||| |
|
|
| T |
25568495 |
taaatgatgatactcaggaagatatat |
25568521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 26 - 328
Target Start/End: Complemental strand, 4322892 - 4322591
Alignment:
| Q |
26 |
cttagaggatatagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagcc |
125 |
Q |
| |
|
||||||||| |||| ||||| ||||||||| ||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||| || | |
|
|
| T |
4322892 |
cttagaggaaatagggttgacaaaatatacataatgaaagaaatggatgaaagtgaatctcttgagctttttagttggcatgcattcaagcaagcgaggc |
4322793 |
T |
|
| Q |
126 |
ctagagatgattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnn |
225 |
Q |
| |
|
|||| | |||||| | |||||||||| ||||||| || |||||||||| |||||||||||||||| ||||| |||||||| ||||||||||||| |
|
|
| T |
4322792 |
ctagcaaagatttttcagaaatttccacaaatgtagttcagtattctgggagattgccgctagctcttgaagtccttgggtcctatttgtttgata-ggg |
4322694 |
T |
|
| Q |
226 |
nnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatga |
325 |
Q |
| |
|
||||||| ||| ||||||||| ||||||||||||||||| || | ||||||||| ||||||| ||||||||||| |||| |||||||||| |
|
|
| T |
4322693 |
aggtaacagagtggatttgtgtattggagaaactcaaaagaattcccaatgatcaagtacatcagaagttaaaaataagctacgatggcttaaatgatga |
4322594 |
T |
|
| Q |
326 |
tac |
328 |
Q |
| |
|
||| |
|
|
| T |
4322593 |
tac |
4322591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 342
Target Start/End: Original strand, 4358636 - 4358937
Alignment:
| Q |
40 |
agttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgatttt |
139 |
Q |
| |
|
||||||| ||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||| |||| |||||||| |||||| |
|
|
| T |
4358636 |
agttgataaaatatacataatgaaagaaatggatgaaagtgaatctcttgagctttttagttggcacgcgttcaagcaaacaaggcctagagaagatttt |
4358735 |
T |
|
| Q |
140 |
gctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgg |
239 |
Q |
| |
|
|||||||||||| ||||||| || ||||||||| |||||||| |||||||| ||||| |||||||| ||||||||||||| | ||| | | |
|
|
| T |
4358736 |
tctgaaatttccaaaaatgtagttaagtattctgcgggattgccactagctcttgaagtccttgggtcttatttgtttgatagggagatt-ttagagt-g |
4358833 |
T |
|
| Q |
240 |
gaga-atgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaagat |
338 |
Q |
| |
|
|||| ||||||||| ||||| ||||||||||| || | |||||| || |||||||| |||||||| ||||||| | ||||||||||||| |||||||| |
|
|
| T |
4358834 |
gagatctgtattggataaactaaaaagaattcccaatgatcaagtgcataagaagttaaaaataagttatgatggtttaaatgatgatacacagaaagaa |
4358933 |
T |
|
| Q |
339 |
atat |
342 |
Q |
| |
|
|||| |
|
|
| T |
4358934 |
atat |
4358937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 36 - 323
Target Start/End: Complemental strand, 4126217 - 4125931
Alignment:
| Q |
36 |
atagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatga |
135 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||| |||||||||||| |||| |||||||| |||||||| ||||||||| | || ||||||||||| |
|
|
| T |
4126217 |
atagagttgacaaaatatacataatgaaagaaatggatgaaagtgaatctcttgaactttttagttggcatgctttcaagcaaacgagtcctagagatga |
4126118 |
T |
|
| Q |
136 |
ttttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacaga |
235 |
Q |
| |
|
|| | |||||||||| ||||||||| || | |||||||| |||||||| |||||||| ||||| ||||| || ||||||||||||| || |||| |
|
|
| T |
4126117 |
ttattctgaaatttctagaaatgtagttaaatattctgggggattgccactagctcttgaagtccttggatcctatttgtttgata-gggaggtatcaga |
4126019 |
T |
|
| Q |
236 |
atgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgat |
323 |
Q |
| |
|
||| ||||||||| ||||||||||||||||| || | ||||||||| |||||||| |||||||||||||||| | |||||||| |
|
|
| T |
4126018 |
gtggatttgtgtattggagaaactcaaaagaattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgat |
4125931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 335
Target Start/End: Original strand, 4333774 - 4334072
Alignment:
| Q |
36 |
atagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatga |
135 |
Q |
| |
|
|||||||||| ||| |||| |||||||||||||| |||||||||||| ||||||||||||| | |||||||||||||||| | || || | ||| || |
|
|
| T |
4333774 |
atagagttgacaaaacatactcaatgaaagaaatggatgaaagtgaatctcttgagctttttagtttgcatgcattcaagcaaacgagtcccacagaaga |
4333873 |
T |
|
| Q |
136 |
ttttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacaga |
235 |
Q |
| |
|
|||| ||||||||||||||||||| || |||||||||| ||||| ||||||||||| ||||| || ||||| ||||||||||||| || ||| |
|
|
| T |
4333874 |
tttttctgaaatttccagaaatgttgttaagtattctgggggattaccgctagctcttgaagtcctcgggtcctatttgtttgata-gggagatattaga |
4333972 |
T |
|
| Q |
236 |
atgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaa |
335 |
Q |
| |
|
||| ||||||||| |||||||||| |||||| || | ||||||||| |||||||| |||||||||||||||| | |||||||||||||| ||||| |
|
|
| T |
4333973 |
gtggatttgtgtattggagaaactcaaaataattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaa |
4334072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 48 - 342
Target Start/End: Original strand, 4343176 - 4343468
Alignment:
| Q |
48 |
aaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaat |
147 |
Q |
| |
|
||||||||| ||||||||||||| || ||||||||| ||||||||||||| |||||||||||||||| | | ||||||||||| |||||| ||||||| |
|
|
| T |
4343176 |
aaatatacataatgaaagaaatggatggaagtgaatctcttgagctttttagttggcatgcattcaagctaacgagccctagagaagatttttctgaaat |
4343275 |
T |
|
| Q |
148 |
ttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgt |
247 |
Q |
| |
|
||||| ||||| | || |||||| || |||||||| |||||||| ||||| |||||||| ||||||||||| | || ||| ||| ||| |
|
|
| T |
4343276 |
ttccaaaaatg-agttaagtattgtgcgggattgcctctagctcttgaagtccttgggtcctatttgtttgaga-gggagctattagagtggatttctgt |
4343373 |
T |
|
| Q |
248 |
attggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
|||||| |||||||||| |||||| || | | |||| || |||||||| ||||||||||| |||| | ||||||||||||| |||||||| |||| |
|
|
| T |
4343374 |
attggagaaactcaaaaaaattcccaatgatgaagtgcataagaagttaaaaataagctacgatggtttaaatgatgatacacagaaagaaatat |
4343468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 4351473 - 4351636
Alignment:
| Q |
58 |
aatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaat |
157 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||| || || | ||| |||||| | |||||||||| |||| |
|
|
| T |
4351473 |
aatgaaagaaatgaatgaaagtgaatctcttgagcgttttagttggcatgcattcaagcaaaagagtcccaaagaagatttttccgaaatttccataaat |
4351572 |
T |
|
| Q |
158 |
gtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgata |
221 |
Q |
| |
|
||| || |||| |||||||| |||||||||||||| ||||| |||||||| || |||||||||| |
|
|
| T |
4351573 |
gtagttaagtactctggagggttgccgctagctcttgaagtccttgggtcctacttgtttgata |
4351636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 342
Target Start/End: Complemental strand, 4135570 - 4135257
Alignment:
| Q |
27 |
ttagaggatatagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccc |
126 |
Q |
| |
|
||||||| |||||||| | ||| |||||| |||| | ||||| |||||||||||| ||||||||||||| ||||||||||||||| ||| || || |
|
|
| T |
4135570 |
ttagaggggatagagttaaccaagtatacataatggaggaaatagatgaaagtgaatctcttgagctttttagttggcatgcattcaagaaagtgagtcc |
4135471 |
T |
|
| Q |
127 |
tagagatgattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnn |
226 |
Q |
| |
|
||||| | |||||| ||||||||| |||||| | |||||| ||| ||| | ||||| ||||| ||||| |||||||| || |||||||||| |
|
|
| T |
4135470 |
aagaga-aaatttgctcaaatttccataaatgttgtctagtattgtgggggactcccgctggctctggaagtccttgggtcctacttgtttgata-gaca |
4135373 |
T |
|
| Q |
227 |
nntaacagaatgggagaatgtattggaaaaactcaaaagaatt-cctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatga |
325 |
Q |
| |
|
||||| |||||||| | |||||| | ||||||| |||||| || || | |||||| |||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
4135372 |
ggtaacaaaatgggagtgtctattgg-agaactcaagagaattccccaatgatcaagtgcaaaagaagttgaaaataagctatgatggtttaaatgatga |
4135274 |
T |
|
| Q |
326 |
tactcagaaagatatat |
342 |
Q |
| |
|
|| ||| |||||||| |
|
|
| T |
4135273 |
caccgagagagatatat |
4135257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 63 - 220
Target Start/End: Original strand, 6726157 - 6726314
Alignment:
| Q |
63 |
aagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaat |
162 |
Q |
| |
|
|||||||| |||||||||||| | ||||||| || |||||||||||||||||| |||| || | ||| ||||||||| || ||| | | |||| || |
|
|
| T |
6726157 |
aagaaatggatgaaagtgaatctctcaagcttttcagttggcatgcattcaagcaatcaagtccaaaagaagattttgctaaacattcaacagatgtgat |
6726256 |
T |
|
| Q |
163 |
tgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgat |
220 |
Q |
| |
|
|| |||||||| |||||||| ||||| || ||||| ||||||||||||||| |||| |
|
|
| T |
6726257 |
tgcatattctgggggattgccactagcacttgaagtcattgggtcatatttgtctgat |
6726314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 6500077 - 6500033
Alignment:
| Q |
74 |
gaaagtgaatcaattgagctttttagctggcatgcattcaagcaa |
118 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
6500077 |
gaaagtgaatctcttgagcttttcagctggcatgcattcaagcaa |
6500033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 6756664 - 6756752
Alignment:
| Q |
35 |
tatagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaag |
123 |
Q |
| |
|
||||||||||||||| | || ||| ||||||||| |||||| ||||| |||||||||| || |||||||||||||||||| |||| |
|
|
| T |
6756664 |
tatagagttgatcaagtttatgaaataaaagaaatggatgaaagcgaatctcttgagcttttcagttggcatgcattcaagcaaccaag |
6756752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 215
Target Start/End: Original strand, 6814001 - 6814153
Alignment:
| Q |
63 |
aagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaat |
162 |
Q |
| |
|
|||||||| |||||||||||| || ||||||| || |||||||||||||||||| |||| || | ||| ||||||||| || || | | |||| || |
|
|
| T |
6814001 |
aagaaatggatgaaagtgaatctcttaagcttttcagttggcatgcattcaagcaaccaagtccgatagaagattttgctaaacatttaacagatgtgat |
6814100 |
T |
|
| Q |
163 |
tgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgt |
215 |
Q |
| |
|
| |||||||| |||||||| ||||| || ||||| || ||||| ||||||| |
|
|
| T |
6814101 |
ttcttattctgggggattgccactagcacttgaagtcctcgggtcctatttgt |
6814153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 6751068 - 6751134
Alignment:
| Q |
57 |
caatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaag |
123 |
Q |
| |
|
|||| ||||||||| ||||||||||| |||||||||| || |||||||||||||||||| |||| |
|
|
| T |
6751068 |
caataaaagaaatgaacgaaagtgaatctcttgagcttttcagttggcatgcattcaagcaaccaag |
6751134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 8413021 - 8413107
Alignment:
| Q |
37 |
tagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaag |
123 |
Q |
| |
|
||||||||||||| | || ||||| ||||||||| ||||||||||| | ||||||| || |||||||||||||||||| |||| |
|
|
| T |
8413021 |
tagagttgatcaagtgtatacaataaaagaaatggacgaaagtgaatctctcaagcttttcagttggcatgcattcaagcaaccaag |
8413107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 6547644 - 6547564
Alignment:
| Q |
62 |
aaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgct |
142 |
Q |
| |
|
||||||||| ||||| |||||| ||||||| || || |||||||||||||||||| |||| || | ||| ||||||||| |
|
|
| T |
6547644 |
aaagaaatggatgaaattgaatctcttgagctattcagttggcatgcattcaagcaaccaagtccaatagaagattttgct |
6547564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 6624169 - 6624109
Alignment:
| Q |
63 |
aagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaag |
123 |
Q |
| |
|
|||||||| ||| |||||||| |||||||||| || |||||||||||||||||| |||| |
|
|
| T |
6624169 |
aagaaatggatgagagtgaatctcttgagcttttcagttggcatgcattcaagcaaccaag |
6624109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 6647185 - 6647269
Alignment:
| Q |
38 |
agagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaa |
122 |
Q |
| |
|
|||||||| || ||||| | | |||||||| || |||||||||||||||||| ||||||| ||| ||||||||| ||||||| |
|
|
| T |
6647185 |
agagttgaccatatatataaagtgaaagaattggatgaaagtgaatcaattgaactttttaattgggctgcattcaaccaagcaa |
6647269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 6794671 - 6794731
Alignment:
| Q |
63 |
aagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaag |
123 |
Q |
| |
|
|||||||| |||||||||||| || ||||||| || |||||||||||||||||| |||| |
|
|
| T |
6794671 |
aagaaatggatgaaagtgaatctcttaagcttttcagttggcatgcattcaagcaaccaag |
6794731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 133; Significance: 4e-69; HSPs: 23)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 17 - 342
Target Start/End: Original strand, 5395246 - 5395570
Alignment:
| Q |
17 |
atgaacattcttagaggatatagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagc |
116 |
Q |
| |
|
|||||||| |||||||| |||||||||| ||||| |||| ||||||||||||| | ||| |||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
5395246 |
atgaacatacttagaggtaatagagttgaccaaatttacaaaatgaaagaaatggacggaagcgaatcaattgagctctttagttggcatgcattcaagc |
5395345 |
T |
|
| Q |
117 |
aagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtt |
216 |
Q |
| |
|
|||| || || ||||| |||||||| |||||||| ||||||||| ||||||||||||| |||||||| |||||||| ||||| ||||| ||| ||||||| |
|
|
| T |
5395346 |
aagcgagtccaagagaagattttgcagaaatttcaagaaatgtagttgagtattctgggggattgccactagctctggaagtccttggatcacatttgtt |
5395445 |
T |
|
| Q |
217 |
tgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctct |
316 |
Q |
| |
|
||| | || |||| ||| || |||||| |||||| |||||||||||||||| | |||||| ||||||||||| |||||||||||||||||| | |
|
|
| T |
5395446 |
tga-attgggattagcagagtggaagtgtgtattagaaaaaatcaaaagaattcctaatgatcaagttcaaaagaagttaaaaataagctatgatgcttt |
5395544 |
T |
|
| Q |
317 |
aaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
||||||||| ||| ||||||| |||| |
|
|
| T |
5395545 |
aaatgatgacactgagaaagaaatat |
5395570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 342
Target Start/End: Complemental strand, 5183751 - 5183427
Alignment:
| Q |
17 |
atgaacattcttagaggatatagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagc |
116 |
Q |
| |
|
||||| || |||||||| |||||||||| ||| | |||| ||||||| |||| |||||| |||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
5183751 |
atgaaaatacttagaggtaatagagttgaccaagtttacaaaatgaaaataatggatgaaagcgaatcaattgagctatttagttggcatgcattcaagc |
5183652 |
T |
|
| Q |
117 |
aagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtt |
216 |
Q |
| |
|
||||| | |||||||| | |||||||| |||||| ||||||||| ||||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||| |
|
|
| T |
5183651 |
aagcaggtcctagagaaggttttgctggaatttcaagaaatgtagttgagtattctgggggattgccactagctctggaagtccttggatcatatttgtt |
5183552 |
T |
|
| Q |
217 |
tgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctct |
316 |
Q |
| |
|
||||| || ||||||| || || ||| ||||||||||||||||||||||| | |||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
5183551 |
tgata-tggggatagaagaatggaagtgtgcattagaaaaactcaaaagaattcctaatgatcaagtacaaaagaagttaaaaataagctacgatgctct |
5183453 |
T |
|
| Q |
317 |
aaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
|| |||||| || ||||||| |||| |
|
|
| T |
5183452 |
aagtgatgacaccgagaaagaaatat |
5183427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 26 - 334
Target Start/End: Complemental strand, 5075521 - 5075214
Alignment:
| Q |
26 |
cttagaggatatagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagcc |
125 |
Q |
| |
|
|||||||| |||||||||| ||| | | || ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||| | |
|
|
| T |
5075521 |
cttagagggaatagagttgaccaagtgtgcaaaatgaaagaaatggatgaaagtgaatcaattgagctttttagttggcatgcattcaaacaagcaagtc |
5075422 |
T |
|
| Q |
126 |
ctagagatgattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnn |
225 |
Q |
| |
|
||| ||| |||||||||| |||||| ||||||||| | ||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
5075421 |
ctatagaagattttgctggaatttcaagaaatgtagtggagtattctgggggattgccgctagctctacaagtcattgggtcatatttgtttgata-ggg |
5075323 |
T |
|
| Q |
226 |
nnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatga |
325 |
Q |
| |
|
|| |||| ||| || ||||||||| ||||||| |||||||||||| | |||||| || |||||||| |||||||||||||||| | |||| ||||| |
|
|
| T |
5075322 |
ggatagcagagtggaagtgtgtattggagaaactcataagaattcctaatgatcaagtgcagaagaagttaaaaataagctatgatggtttaaacgatga |
5075223 |
T |
|
| Q |
326 |
tactcagaa |
334 |
Q |
| |
|
||| |||| |
|
|
| T |
5075222 |
cactgagaa |
5075214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 36 - 342
Target Start/End: Complemental strand, 5068854 - 5068549
Alignment:
| Q |
36 |
atagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatga |
135 |
Q |
| |
|
|||||||| || || ||| || ||||||| | ||| |||||||||||||||| |||| ||||| ||||| |||||||||||||| | |||| | | || |
|
|
| T |
5068854 |
atagagttaataaagtattcaaaatgaaacacatggatgaaagtgaatcaattaagctatttagttggcacgcattcaagcaagcgggtcctacaaaaga |
5068755 |
T |
|
| Q |
136 |
ttttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacaga |
235 |
Q |
| |
|
|||||||| |||||||||||| || ||||||||||||| |||||||| |||||| | ||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
5068754 |
ttttgctgcaatttccagaaaggtcgttgagtattctgggggattgccactagctttggaagtccttgggtcatatttgtttgata-gagaggtaacaga |
5068656 |
T |
|
| Q |
236 |
atgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaa |
335 |
Q |
| |
|
|||| | | ||||||||| |||||||||||||||||||| ||||||||| ||||||| | |||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
5068655 |
atggaaaagtgtattggacaaactcaaaagaattcctaataatcaagtacaggagaagttaagaataagctatgatgctttaaatgatgatactgagaaa |
5068556 |
T |
|
| Q |
336 |
gatatat |
342 |
Q |
| |
|
|| |||| |
|
|
| T |
5068555 |
gaaatat |
5068549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 73 - 342
Target Start/End: Original strand, 5424012 - 5424280
Alignment:
| Q |
73 |
tgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattct |
172 |
Q |
| |
|
||||||||||||||||||||| || || |||||||| ||||||||||| || |||| | | ||||||||||||||||| ||||||||| |||| |||||| |
|
|
| T |
5424012 |
tgaaagtgaatcaattgagctattaagttggcatgccttcaagcaagcgagtcctacaaaagattttgctgaaatttctagaaatgtagttgattattct |
5424111 |
T |
|
| Q |
173 |
ggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcct |
272 |
Q |
| |
|
|| |||||||| |||||| | ||||| ||||||||||||||||| || | | ||||||||| | | || ||||||||||||||||||||||||| |
|
|
| T |
5424112 |
ggtggattgccactagctttggaagtccttgggtcatatttgttcgacagagggatt-acagaatggaaaagtgcattggaaaaactcaaaagaattcct |
5424210 |
T |
|
| Q |
273 |
aacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
|| ||||||||| ||||||| | |||||||||||||||| |||||||||||||| ||||||| |||| |
|
|
| T |
5424211 |
aataatcaagtacaggagaagttaagaataagctatgatgctttaaatgatgatactgagaaagaaatat |
5424280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 73 - 342
Target Start/End: Original strand, 5094300 - 5094568
Alignment:
| Q |
73 |
tgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattct |
172 |
Q |
| |
|
||||||||||||||||||| | ||||| |||||||||||||||||||| || |||| | | ||||||| ||||||||| ||||||||| ||||||||||| |
|
|
| T |
5094300 |
tgaaagtgaatcaattgagttatttagttggcatgcattcaagcaagcgagtcctacaaacgattttgttgaaatttctagaaatgtagttgagtattct |
5094399 |
T |
|
| Q |
173 |
ggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcct |
272 |
Q |
| |
|
|| || ||||| ||||| | ||||| |||||||||||||| || |||| ||||||||||| | | || |||||| |||||||||||||||||| |
|
|
| T |
5094400 |
ggggggttgccactagcattggaagtccttgggtcatatttattcgata-gggaggtaacagaatggaaaagtgcattggacaaactcaaaagaattcct |
5094498 |
T |
|
| Q |
273 |
aacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
|| |||| |||| |||||||| | |||||||||||||||| |||||||||| | | ||||||| |||| |
|
|
| T |
5094499 |
aataatcaattacagaagaagttaagaataagctatgatgctttaaatgatgacattgagaaagaaatat |
5094568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 77 - 326
Target Start/End: Complemental strand, 5356355 - 5356107
Alignment:
| Q |
77 |
agtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattctggag |
176 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||||||||||| |||| | | ||||| |||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
5356355 |
agtgaatcaattgagctatttagttggcatgcattcaagcaagcaagtcctacaaaagatttagctggaatttccagaaatgtagttgagtattctggag |
5356256 |
T |
|
| Q |
177 |
gattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacg |
276 |
Q |
| |
|
|||| ||||| ||||||||||| |||||||| |||||||| || | || | || ||| | | || ||||| ||||||||||||||||||||| |
|
|
| T |
5356255 |
gattaccgctggctctagaagtccttgggtcgtatttgttcgaca-gggaggtagcggagtggtacagtgccttggagaaactcaaaagaattcctaaca |
5356157 |
T |
|
| Q |
277 |
gtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgat |
326 |
Q |
| |
|
|||||||||||||| | |||||||||||||||| | ||||||||||| |
|
|
| T |
5356156 |
accaagtacaaaagaaactaaaaataagctatgatggtttaaatgatgat |
5356107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 73 - 326
Target Start/End: Original strand, 5368719 - 5368971
Alignment:
| Q |
73 |
tgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattct |
172 |
Q |
| |
|
||||||||||||||||||||| || || ||||||||||| |||||||| || ||| | ||||||||| ||||||| ||||||||| | ||||||||| |
|
|
| T |
5368719 |
tgaaagtgaatcaattgagctattcagttggcatgcatttaagcaagcgagtcctgcgaaagattttgctaaaatttctagaaatgtagtggagtattct |
5368818 |
T |
|
| Q |
173 |
ggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcct |
272 |
Q |
| |
|
|| |||||||| |||||| | ||||| ||||||||||||||||||| | ||||||||||| | | || |||||| |||||||||||||||||| |
|
|
| T |
5368819 |
gggggattgccactagctttggaagttattgggtcatatttgtttgaca-gagggataacagaatggaaaagtgcattggacaaactcaaaagaattcct |
5368917 |
T |
|
| Q |
273 |
aacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgat |
326 |
Q |
| |
|
|| ||||||||| |||||||| | |||||||||||||||| ||||||||||| |
|
|
| T |
5368918 |
aataatcaagtacagaagaagttaagaataagctatgatgctttaaatgatgat |
5368971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 324
Target Start/End: Complemental strand, 5148739 - 5148452
Alignment:
| Q |
36 |
atagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatga |
135 |
Q |
| |
|
|||||||||| || |||||| ||||||||||||| |||| ||||||||||| ||||||||| |||||||||||||||||||| || |||||||| || |
|
|
| T |
5148739 |
atagagttgaccatgtatacaaaatgaaagaaatggatgaaggtgaatcaattatgctttttagttggcatgcattcaagcaagcgagtcctagagaaga |
5148640 |
T |
|
| Q |
136 |
ttttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacaga |
235 |
Q |
| |
|
|||||||| ||| ||||||| || ||||||||| || || ||||||||||||| ||||| ||||||| ||||| ||||||| ||| ||| |
|
|
| T |
5148639 |
ttttgctggaatatccagaaggatagttgagtatttggggcgactgccgctagctctggaagttattgggtcgtatttatttgata-gggggataataga |
5148541 |
T |
|
| Q |
236 |
atgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatg |
324 |
Q |
| |
|
||| || ||||||||| ||||||||||||||||| || | |||||| || |||||||| |||||||||||||| | | ||||||||| |
|
|
| T |
5148540 |
gtggaagtgtgtattggacaaactcaaaagaattcccaatgatcaagtgcagaagaagttaaaaataagctatgacgatttaaatgatg |
5148452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 59 - 342
Target Start/End: Original strand, 5341939 - 5342221
Alignment:
| Q |
59 |
atgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatg |
158 |
Q |
| |
|
|||||||||||| || || ||||||| ||||||| ||||| |||||||| |||||||||||||| || ||||||| ||||| || |||||| ||||| |
|
|
| T |
5341939 |
atgaaagaaatggatgcaaatgaatcacttgagctatttagttggcatgcgttcaagcaagcaagtccaagagatggttttgttggaatttctgaaaatg |
5342038 |
T |
|
| Q |
159 |
taattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaaac |
258 |
Q |
| |
|
|| | ||||||| ||| ||||||||||||||| | ||||| || || |||||||||||||||| | ||||||| | || ||| ||||||| |
|
|
| T |
5342039 |
tagtcgagtattgtggtggattgccgctagctttggaagttctaggctcatatttgtttgatagaggggc-agtagaatggaactgtgcattagaaaaac |
5342137 |
T |
|
| Q |
259 |
tcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
| ||||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||| || ||| ||||||| |||| |
|
|
| T |
5342138 |
ttaaaagaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatat |
5342221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 73 - 342
Target Start/End: Complemental strand, 5104615 - 5104347
Alignment:
| Q |
73 |
tgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattct |
172 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||||||| || || | | | |||||| |||| |||| ||||||||| ||||||||||| |
|
|
| T |
5104615 |
tgaaagtgaatcaattgagctatttagttggcatgcattcaagcaagtgagtccgacaaaagattttattgaattttctagaaatgtagttgagtattct |
5104516 |
T |
|
| Q |
173 |
ggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcct |
272 |
Q |
| |
|
|| || ||||| ||||| | ||||| |||||||||||||| || |||| ||| ||||||| | | | |||||| |||||||||||||||||| |
|
|
| T |
5104515 |
ggggggttgccactagcattggaagtccttgggtcatatttattcgata-gagaagtaagagaatggaaaagtacattggacaaactcaaaagaattcct |
5104417 |
T |
|
| Q |
273 |
aacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
|| |||||||||||||||||| | ||||||||| |||| | |||||||||| | | ||||||| |||| |
|
|
| T |
5104416 |
aataatcaagtacaaaagaagttaagaataagctacgatggtttaaatgatgacattgagaaagaaatat |
5104347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 73 - 342
Target Start/End: Complemental strand, 5133648 - 5133380
Alignment:
| Q |
73 |
tgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattct |
172 |
Q |
| |
|
||||| ||| ||||||||| | ||||| ||||||||||||||| | || | || | | | ||||||||||||||||| ||| | ||| ||||||||||| |
|
|
| T |
5133648 |
tgaaaatgagtcaattgagttatttagttggcatgcattcaagaatgcgactcccacaaaagattttgctgaaatttctagagacgtagttgagtattct |
5133549 |
T |
|
| Q |
173 |
ggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcct |
272 |
Q |
| |
|
|| |||||||| |||||||||||||| ||||||||||||||| | |||| ||| || ||| | ||||||||| ||||||| |||||||||| |
|
|
| T |
5133548 |
gggggattgcctctagctctagaagtccttgggtcatatttgctagata-ggagtgtaatcgagtggcaatgtgtattggagaaactcagaagaattcct |
5133450 |
T |
|
| Q |
273 |
aacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
|| |||||||||||||||| | |||||||||||||||||| ||||||| |||| | ||||||| |||| |
|
|
| T |
5133449 |
aataatcaagtacaaaagaagctaaaaataagctatgatgctttaaatgaagatattgagaaagaaatat |
5133380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 145 - 342
Target Start/End: Original strand, 5348706 - 5348902
Alignment:
| Q |
145 |
aatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaa |
244 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |||||| | ||||| |||||||||| |||||||||| ||||||||||| | | |
|
|
| T |
5348706 |
aatttccagaaatgtagttgagtattctggaggattgccactagctttggaagtccttgggtcattattgtttgata-gaggggtaacagaatggaaaag |
5348804 |
T |
|
| Q |
245 |
tgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||| | ||||| | ||||||||| |||||| | |||||||||||| ||||||| |||| |
|
|
| T |
5348805 |
tgtattggacaaactcaaaagaattcctaataatcaagtacaggaaaagttaagaataagctacgatgctttgaatgatgatactgagaaagaaatat |
5348902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 58 - 342
Target Start/End: Complemental strand, 5691869 - 5691586
Alignment:
| Q |
58 |
aatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaag-ccctagagatgattttgctgaaatttccagaaa |
156 |
Q |
| |
|
||||||||| ||| ||||| ||||||||| ||||| ||||| |||||||| |||||||||||||| ||| ||| | |||||||||| | | |||| ||| |
|
|
| T |
5691869 |
aatgaaagagatgaatgaaaatgaatcaatggagctctttagttggcatgctttcaagcaagcaagacccaagaaa-gattttgctgcattgtccaaaaa |
5691771 |
T |
|
| Q |
157 |
tgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaa |
256 |
Q |
| |
|
|||| ||||||||||||| |||||||| |||||| | ||||| ||||||||| |||| ||||| | ||||||||||||||| |||||| | || |
|
|
| T |
5691770 |
tgtagttgagtattctgggggattgccactagctttggaagtccttgggtcacatttatttgaca-ggatggtaacagaatgggagagcgtattgaacaa |
5691672 |
T |
|
| Q |
257 |
actcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
||||||| ||||||||| |||||||||||| ||||| | |||||||||||||| | ||| |||| |||| ||||||| |||| |
|
|
| T |
5691671 |
actcaaagcaattcctaatcatcaagtacaaaaaaagttaagaataagctatgatggtttaagtgattatacggagaaagaaatat |
5691586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 21 - 312
Target Start/End: Original strand, 5175073 - 5175363
Alignment:
| Q |
21 |
acattcttagaggatatagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagc |
120 |
Q |
| |
|
|||| |||||||| |||||||||| || ||||| | | ||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||| |
|
|
| T |
5175073 |
acatacttagaggggatagagttgacaaagtatactctaataaagaaatggatgaaagtgaatcaattgagctctttaattggcatgcattcaaacaagt |
5175172 |
T |
|
| Q |
121 |
aagccctagagatgattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgat |
220 |
Q |
| |
|
|| || | ||| || |||| ||||||||||| |||||| || |||||||||| ||||||||| ||||||||||||| |||||| ||||||||||| |
|
|
| T |
5175173 |
gagtcccatagaagaatttgttgaaatttccaaaaatgttgttaagtattctgggggattgccgttagctctagaagttcttgggcgctatttgtttgag |
5175272 |
T |
|
| Q |
221 |
annnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatg |
312 |
Q |
| |
|
| ||||||||||| | ||||||| | ||||| ||||||||||||| | |||||||||||||||| |||||||||||||||| |
|
|
| T |
5175273 |
a-agaaggtaacagaatggaattgtgtattgaagaaactagaaagaattcctaatgacaaagtacaaaagaagttaaaaataagctatgatg |
5175363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 73 - 325
Target Start/End: Complemental strand, 5159244 - 5158993
Alignment:
| Q |
73 |
tgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattct |
172 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||| |||||||||||||| || |||| | | ||||||| ||||||||| ||||||||| || |||||||| |
|
|
| T |
5159244 |
tgaaagtgaatcaattgagctatttagttggcacgcattcaagcaagcgagtcctacaaacgattttgttgaaatttctagaaatgtagttaagtattct |
5159145 |
T |
|
| Q |
173 |
ggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcct |
272 |
Q |
| |
|
|| || ||||| ||||| | ||||| || |||||| |||| || ||| ||||||||||| | | || ||||| |||||||||||||||||| |
|
|
| T |
5159144 |
ggggggttgccactagcattggaagtcctagggtcacatttattcaata-gggaggtaacagaatggaaaagtgcgttggacaaactcaaaagaattcct |
5159046 |
T |
|
| Q |
273 |
aacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatga |
325 |
Q |
| |
|
|| ||||||||| |||||||| ||||||||| |||||| |||||||||| |
|
|
| T |
5159045 |
aataatcaagtacataagaagttacgaataagctacgatgctttaaatgatga |
5158993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 21 - 312
Target Start/End: Original strand, 5276900 - 5277190
Alignment:
| Q |
21 |
acattcttagaggatatagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagc |
120 |
Q |
| |
|
|||| |||||||| |||||||||| || ||||| | | ||||||||| ||||| ||||||||||||||| |||| |||||||||||||| |||| |
|
|
| T |
5276900 |
acatacttagagggaatagagttgacaaagtatactctaataaagaaatggatgaaaatgaatcaattgagctctttaattggcatgcattcaaacaagt |
5276999 |
T |
|
| Q |
121 |
aagccctagagatgattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgat |
220 |
Q |
| |
|
|| || | ||| || |||| ||||||||||| |||||| || ||||||||| ||||||||| ||||||||||||| |||||| ||||||||||| |
|
|
| T |
5277000 |
gagtcccatagaagaatttgttgaaatttccaaaaatgttgttatgtattctgggggattgccgttagctctagaagttcttgggcgctatttgtttgag |
5277099 |
T |
|
| Q |
221 |
annnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatg |
312 |
Q |
| |
|
| ||||||||||| | ||||||| | ||||| ||||||||||||| | |||||||||||||||| |||||||||||||||| |
|
|
| T |
5277100 |
a-agaaggtaacagaatggaattgtgtattgaagaaactagaaagaattcctaatgacaaagtacaaaagaagttaaaaataagctatgatg |
5277190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 38 - 221
Target Start/End: Complemental strand, 5261924 - 5261741
Alignment:
| Q |
38 |
agagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgatt |
137 |
Q |
| |
|
|||||||| ||||||||| ||||| | |||| ||||| ||||||||||||||||||||| ||| ||||||||||| |||| || |||| | |||| |
|
|
| T |
5261924 |
agagttgacaaaatatacaaaatgacaacaatgaatgaaaatgaatcaattgagctttttagttggaatgcattcaagaaagcgagtcctacaagagatt |
5261825 |
T |
|
| Q |
138 |
ttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgata |
221 |
Q |
| |
|
|| || | || ||| ||||||| |||| |||| ||||||||||||||||||||| ||||| |||||||| ||||||||||||| |
|
|
| T |
5261824 |
ttattggatttaccaaaaatgtagttgaatattgtggaggattgccgctagctctcgaagtccttgggtcttatttgtttgata |
5261741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 327
Target Start/End: Original strand, 5381913 - 5382161
Alignment:
| Q |
78 |
gtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattctggagg |
177 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| |||||| | |||||| | | | || |||| || ||||| || |
|
|
| T |
5381913 |
gtgaatcaattgagctttttagctggcatgcattcaagcaaccaaggcctacagaagatttttttaaaatttgtaaagaaatagttgactactctggggg |
5382012 |
T |
|
| Q |
178 |
attgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacgg |
277 |
Q |
| |
|
|||||| |||||||||||||| ||||| || | ||||||||| | || |||| ||| || ||||||||| ||| |||||| |||||| || | |
|
|
| T |
5382013 |
attgcctctagctctagaagtccttggttcttttttgtttga-aaggggagtagcagattggaagtgtgtattggagaaaatcaaaataattcccaatga |
5382111 |
T |
|
| Q |
278 |
tcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgata |
327 |
Q |
| |
|
| |||||||| |||||| |||||||||||||||| | ||||||| |||| |
|
|
| T |
5382112 |
tgaagtacaacggaagttaaaaataagctatgatggtttaaatgacgata |
5382161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 5445339 - 5445483
Alignment:
| Q |
73 |
tgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattct |
172 |
Q |
| |
|
||||||||| ||||| ||||||||||| ||| |||||||||||| ||| | |||| | | ||||||| | |||||||| ||||||| |||| |||||| |
|
|
| T |
5445339 |
tgaaagtgagtcaatcgagctttttagttggaatgcattcaagcgagcgtgtcctacaaaagattttgttagaatttccaaaaatgtagttgaatattct |
5445438 |
T |
|
| Q |
173 |
ggaggattgccgctagctctagaagtgcttgggtcatatttgttt |
217 |
Q |
| |
|
| ||||||||||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
5445439 |
gagggattgccgctagctcttgaagtccttgggtcttatttgttt |
5445483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 312
Target Start/End: Original strand, 5431629 - 5431904
Alignment:
| Q |
36 |
atagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatga |
135 |
Q |
| |
|
|||||||||| |||||||| ||| ||| ||||| ||| ||||||||| |||||||||||| ||||||||||||||||||| || || | || || |
|
|
| T |
5431629 |
atagagttgacgaaatatactcaaataaaaaaatggatgacagtgaatcacttgagctttttatatggcatgcattcaagcaagtgagtcccaaagcaga |
5431728 |
T |
|
| Q |
136 |
ttttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacaga |
235 |
Q |
| |
|
|||| ||||||||| ||||||| || |||||| | ||||||||||||||||||||||| |||||| |||||||| ||| | ||||||| |
|
|
| T |
5431729 |
atttgttgaaatttctagaaatgccgttatgtattccgcgggattgccgctagctctagaagttcttgggcgatatttgtatgaga-gggatgtaacaga |
5431827 |
T |
|
| Q |
236 |
atgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatg |
312 |
Q |
| |
|
|||| | |||| |||| |||||||||| |||||| || | |||||||||| ||||| |||||||||||||||| |
|
|
| T |
5431828 |
atggaaatgtgtactggagaaactcaaaacaattcccaataataaagtacaaaataagttaaaaataagctatgatg |
5431904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 221
Target Start/End: Complemental strand, 5285805 - 5285738
Alignment:
| Q |
154 |
aaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgata |
221 |
Q |
| |
|
||||||| |||| |||| ||||||||||||||||||||| ||||| |||||||| ||||||||||||| |
|
|
| T |
5285805 |
aaatgtagttgaatattgtggaggattgccgctagctctcgaagtccttgggtcttatttgtttgata |
5285738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 5261718 - 5261651
Alignment:
| Q |
245 |
tgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatg |
312 |
Q |
| |
|
||||||||| |||||||||||||||||||| | |||||| || |||||||| | |||||| ||||||| |
|
|
| T |
5261718 |
tgtattggagaaactcaaaagaattcctaatgatcaagtgcagaagaagttaagaataagttatgatg |
5261651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 26 - 342
Target Start/End: Complemental strand, 36215682 - 36215367
Alignment:
| Q |
26 |
cttagaggatatagagttgatcaaatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagcc |
125 |
Q |
| |
|
|||||||| |||||||||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || | |
|
|
| T |
36215682 |
cttagagggaatagagttgaccaagtatacgcaatgaaagaaatggatgaaagtgaatcaattgagctttttagttggcatgcattcaagcaagtgaggc |
36215583 |
T |
|
| Q |
126 |
ctagagatgattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnn |
225 |
Q |
| |
|
| | ||| |||||||||| ||||||||| |||||| ||||||||||||| | | ||| ||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
36215582 |
ccaaagaagattttgctggaatttccagcaatgtagttgagtattctgggcaactaccgttagctctggaagtccttgggtcatatttgtttgata-ggg |
36215484 |
T |
|
| Q |
226 |
nnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatga |
325 |
Q |
| |
|
||| ||| ||| || ||||||||| ||||||||||||||||| || | ||||||||||||||||| ||||| |||||||| | |||||||||||| |
|
|
| T |
36215483 |
ggataatagagtggaagtgtgtattggacaaactcaaaagaattcccaatgaccaagtacaaaagaagttaaaaatgagctatgaaggtctaaatgatga |
36215384 |
T |
|
| Q |
326 |
tactcagaaagatatat |
342 |
Q |
| |
|
|| ||||||| |||| |
|
|
| T |
36215383 |
cacggagaaagaaatat |
36215367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 18929231 - 18929291
Alignment:
| Q |
58 |
aatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaa |
118 |
Q |
| |
|
||||||||||||| || | |||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
18929231 |
aatgaaagaaatggacgacaatgaatctcttgagctttttagttggcatgcattcaagcaa |
18929291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 34727495 - 34727435
Alignment:
| Q |
58 |
aatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaa |
118 |
Q |
| |
|
||||||||||||| || | |||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
34727495 |
aatgaaagaaatggatggcaatgaatctcttgagctttttagttggcatgcattcaagcaa |
34727435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 92 - 327
Target Start/End: Original strand, 8876079 - 8876313
Alignment:
| Q |
92 |
ctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattctggaggattgccgctagctc |
191 |
Q |
| |
|
|||||||| |||||||| ||||||||| | || |||||||| |||||| || ||| |||||||||||| ||||||||||||| |||||||| | ||||| |
|
|
| T |
8876079 |
ctttttagttggcatgcgttcaagcaaccgagtcctagagaaaattttgttggaatgtccagaaatgtagttgagtattctgggggattgccaccagctc |
8876178 |
T |
|
| Q |
192 |
tagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacggtcaagtacaaaaga |
291 |
Q |
| |
|
||||||| ||||| |||||||||||||| | || | || ||| | |||||||||||||||||||| ||| || || | ||||||||| ||| |
|
|
| T |
8876179 |
tagaagttcttggatcatatttgtttga-aaggggggtagccgagtggaaatgtgtattggaaaaactcaaaaaaatccccaatgatcaagtacatgaga |
8876277 |
T |
|
| Q |
292 |
agttgaaaataagctatgatgctctaaatgatgata |
327 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||| |
|
|
| T |
8876278 |
agttaaaaataagctatgatggtctaaatgatgata |
8876313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 312
Target Start/End: Complemental strand, 22586088 - 22585826
Alignment:
| Q |
49 |
aatatacacaatgaaagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatt |
148 |
Q |
| |
|
|||||||| ||||| || |||| ||||||||| ||||||||||||||||| ||| |||||||||||||||| || || | || |||||| |||||||| |
|
|
| T |
22586088 |
aatatacataatgacagtaatgaatgaaagtgagtcaattgagctttttagttggaatgcattcaagcaagcgagacccaaagtagatttttctgaaatt |
22585989 |
T |
|
| Q |
149 |
tccagaaatgtaattgagtattctggaggattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgta |
248 |
Q |
| |
|
|||| ||||| || | ||||||||||| |||||||||||||| ||||| |||||| |||||||||| || ||||||||||| | |||| |
|
|
| T |
22585988 |
tccatgaatgtggttaattattctggagggttgccgctagctctggaagtccttgggcgttatttgtttgcta-gaggggtaacagaatggcaatgtgta |
22585890 |
T |
|
| Q |
249 |
ttggaaaaactcaaaagaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatg |
312 |
Q |
| |
|
||||| |||||||||||||||||||| | |||||| || |||||||| | |||||| ||||||| |
|
|
| T |
22585889 |
ttggagaaactcaaaagaattcctaatgatcaagtgcagaagaagttaagaataagttatgatg |
22585826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 77 - 342
Target Start/End: Complemental strand, 10407 - 10143
Alignment:
| Q |
77 |
agtgaatcaattgagctttttagctggcatgcattcaagcaagcaagccctagagatgattttgctgaaatttccagaaatgtaattgagtattctggag |
176 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| | ||||||| | | | || || | || ||||| | |
|
|
| T |
10407 |
agtgaatcaattgagctttttagttggcatgcattcaagcaagataggcctagagatgattttcttaaaatttctaaagaaatagttcactactctgggg |
10308 |
T |
|
| Q |
177 |
gattgccgctagctctagaagtgcttgggtcatatttgtttgatannnnnnntaacagaatgggagaatgtattggaaaaactcaaaagaattcctaacg |
276 |
Q |
| |
|
||||||| ||||||||| ||| ||||| || ||||| |||| | || |||| ||| | ||||||||| ||| |||||| |||||| || | |
|
|
| T |
10307 |
gattgcctctagctctaacagtccttggttcctatttatttg-gaaacggaatagcagattggatgtgtgtattggagaaaatcaaaataattcccaaag |
10209 |
T |
|
| Q |
277 |
gtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcagaaagatatat |
342 |
Q |
| |
|
| |||||||| |||||| ||| |||||||||||| | ||||||||||||| | |||||||||| |
|
|
| T |
10208 |
atgaagtacaacggaagttaaaagtaagctatgatggtttaaatgatgatacagaaaaagatatat |
10143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 11632 - 11572
Alignment:
| Q |
63 |
aagaaatgtgtgaaagtgaatcaattgagctttttagctggcatgcattcaagcaagcaag |
123 |
Q |
| |
|
|||||||| |||||||||||| || ||||||| || |||||||||||||||||| |||| |
|
|
| T |
11632 |
aagaaatggatgaaagtgaatctcttaagcttttcagttggcatgcattcaagcaaccaag |
11572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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