View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13632_low_17 (Length: 259)
Name: NF13632_low_17
Description: NF13632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13632_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 43117173 - 43117399
Alignment:
| Q |
14 |
gagatgaaactgacccagatcgtgatgatactcataagggttcctcatcatctttttcatagctatattgtattcttccatcaaatcattagatttagat |
113 |
Q |
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| T |
43117173 |
gagatgaaactgacccagatcgtgatgatactcataagggttcctcatcatctttttcatagctatattgtattcttccatcaaatcattagatttagat |
43117272 |
T |
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| Q |
114 |
acctttttgctggtaggattctcttcaatcccactttctgatagtgtacagcaaattttgttcatcctaatagagtagttgagaggaatcataaaactgc |
213 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43117273 |
acccttttgctggtaggattctcttcaatcccactttctgatagtgtacagcaaattttgttcatcctaatagagtagttgagaggaatcataaaactgc |
43117372 |
T |
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| Q |
214 |
atggcgatttttgtttcctctgctttg |
240 |
Q |
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||||||||||||||||||||||||||| |
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| T |
43117373 |
atggcgatttttgtttcctctgctttg |
43117399 |
T |
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