View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13632_low_20 (Length: 240)
Name: NF13632_low_20
Description: NF13632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13632_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 20 - 237
Target Start/End: Complemental strand, 37413714 - 37413499
Alignment:
| Q |
20 |
ggtcacacattaattttgacaaaaacctatattttttaacagaattatatcgtcaaacctagtgcatattcaaatcttgtatcccaattatattgatttt |
119 |
Q |
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| T |
37413714 |
ggtcacacattaattttgacaaaaacctatattttttaacagaattatatcgtcaaacctagtgcatattcaaatcttgtatcccaattatattgatttt |
37413615 |
T |
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| Q |
120 |
accgtgatttcaccaagctgcaaatattagagaggtagattgacgcacaccaccttcacggttgaagaataaatttccaacacacacatgtatagattct |
219 |
Q |
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| T |
37413614 |
accgtgatttcaccaagctgcaa--attggagaggtagattgacgcacaccaccttcacggttgaagaataaatttccaacacacacatgtatagattct |
37413517 |
T |
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| Q |
220 |
ttttgttcctttcttctc |
237 |
Q |
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|||||||||||||||||| |
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| T |
37413516 |
ttttgttcctttcttctc |
37413499 |
T |
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