View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13634_low_3 (Length: 554)

Name: NF13634_low_3
Description: NF13634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13634_low_3
NF13634_low_3
[»] chr8 (33 HSPs)
chr8 (9-140)||(9078806-9078940)
chr8 (9-140)||(9087583-9087717)
chr8 (159-244)||(16290856-16290941)
chr8 (158-240)||(24184743-24184825)
chr8 (157-230)||(18036807-18036880)
chr8 (159-244)||(26657667-26657752)
chr8 (156-252)||(24317392-24317487)
chr8 (159-246)||(21593181-21593268)
chr8 (159-246)||(23595375-23595462)
chr8 (159-246)||(23604297-23604384)
chr8 (161-244)||(26867458-26867541)
chr8 (173-254)||(44337-44418)
chr8 (159-244)||(10568293-10568378)
chr8 (189-245)||(43856117-43856173)
chr8 (159-246)||(16889972-16890059)
chr8 (159-244)||(45268828-45268913)
chr8 (189-240)||(29840865-29840916)
chr8 (176-242)||(26393352-26393418)
chr8 (159-244)||(6001422-6001507)
chr8 (347-396)||(10568537-10568586)
chr8 (186-235)||(19742051-19742100)
chr8 (173-245)||(43848109-43848181)
chr8 (431-474)||(9078761-9078804)
chr8 (431-474)||(9087538-9087581)
chr8 (159-254)||(16932556-16932651)
chr8 (186-244)||(21499362-21499420)
chr8 (159-244)||(14413337-14413422)
chr8 (356-393)||(25328795-25328832)
chr8 (179-244)||(29250256-29250320)
chr8 (191-240)||(40263681-40263730)
chr8 (343-383)||(44207-44247)
chr8 (206-246)||(16043682-16043722)
chr8 (160-244)||(41600724-41600808)
[»] chr5 (22 HSPs)
chr5 (157-254)||(2259388-2259485)
chr5 (159-240)||(21711531-21711612)
chr5 (158-237)||(15614744-15614823)
chr5 (173-254)||(24765508-24765589)
chr5 (160-244)||(19068688-19068772)
chr5 (189-245)||(21027039-21027095)
chr5 (158-240)||(4120523-4120605)
chr5 (173-246)||(22602038-22602111)
chr5 (159-244)||(35341889-35341973)
chr5 (173-246)||(39324353-39324426)
chr5 (159-235)||(21877894-21877970)
chr5 (168-236)||(28637626-28637694)
chr5 (173-239)||(28682764-28682830)
chr5 (159-244)||(5781073-5781158)
chr5 (189-244)||(11725648-11725703)
chr5 (189-244)||(34995472-34995527)
chr5 (160-246)||(29998565-29998651)
chr5 (343-384)||(2259569-2259610)
chr5 (159-240)||(31329270-31329351)
chr5 (159-244)||(32038414-32038498)
chr5 (160-240)||(13642802-13642882)
chr5 (343-387)||(24765684-24765728)
[»] chr7 (24 HSPs)
chr7 (159-246)||(980917-981004)
chr7 (150-254)||(10996364-10996468)
chr7 (189-246)||(1862350-1862407)
chr7 (173-244)||(1537965-1538036)
chr7 (159-244)||(1633304-1633389)
chr7 (345-396)||(10995667-10995718)
chr7 (173-246)||(12163393-12163466)
chr7 (189-246)||(22849547-22849604)
chr7 (159-243)||(14073790-14073873)
chr7 (159-243)||(14383818-14383901)
chr7 (160-244)||(28780181-28780265)
chr7 (168-236)||(37375017-37375085)
chr7 (189-245)||(38993120-38993176)
chr7 (191-246)||(20382331-20382386)
chr7 (347-396)||(28780014-28780063)
chr7 (160-236)||(2040072-2040148)
chr7 (190-244)||(4463454-4463509)
chr7 (189-244)||(11295393-11295448)
chr7 (173-239)||(12727806-12727872)
chr7 (159-244)||(3399544-3399629)
chr7 (186-235)||(11842764-11842813)
chr7 (347-396)||(14073625-14073674)
chr7 (347-396)||(14383653-14383702)
chr7 (186-235)||(28937357-28937406)
[»] scaffold0437 (2 HSPs)
scaffold0437 (158-240)||(11418-11500)
scaffold0437 (159-246)||(14323-14410)
[»] chr6 (40 HSPs)
chr6 (158-240)||(14641440-14641522)
chr6 (149-246)||(20589631-20589728)
chr6 (159-244)||(20898962-20899047)
chr6 (159-246)||(34338087-34338174)
chr6 (149-254)||(24617716-24617821)
chr6 (149-232)||(8483615-8483698)
chr6 (173-251)||(841311-841390)
chr6 (175-246)||(1448788-1448859)
chr6 (159-246)||(12435952-12436039)
chr6 (161-244)||(24127819-24127902)
chr6 (158-240)||(13575005-13575087)
chr6 (158-240)||(13577544-13577626)
chr6 (160-246)||(24373513-24373599)
chr6 (173-246)||(15141911-15141984)
chr6 (189-241)||(9351147-9351199)
chr6 (186-246)||(11650837-11650897)
chr6 (159-246)||(3056935-3057022)
chr6 (159-246)||(11319467-11319554)
chr6 (173-244)||(14372193-14372264)
chr6 (189-244)||(26522725-26522780)
chr6 (179-244)||(31633595-31633660)
chr6 (154-254)||(30884390-30884490)
chr6 (159-246)||(1110454-1110541)
chr6 (158-244)||(13565913-13565999)
chr6 (158-244)||(13570465-13570551)
chr6 (189-246)||(10138869-10138926)
chr6 (159-244)||(26592515-26592600)
chr6 (159-244)||(32569830-32569915)
chr6 (168-232)||(7242877-7242941)
chr6 (173-237)||(8462014-8462078)
chr6 (189-244)||(9696881-9696936)
chr6 (189-244)||(27962066-27962121)
chr6 (159-233)||(24205471-24205545)
chr6 (159-244)||(8212248-8212333)
chr6 (173-246)||(9344476-9344549)
chr6 (176-254)||(14982378-14982458)
chr6 (159-244)||(18306721-18306805)
chr6 (218-246)||(12085546-12085574)
chr6 (189-245)||(13580179-13580235)
chr6 (206-246)||(30492340-30492380)
[»] scaffold0068 (1 HSPs)
scaffold0068 (159-240)||(2298-2379)
[»] scaffold0009 (1 HSPs)
scaffold0009 (159-244)||(1487-1572)
[»] chr3 (21 HSPs)
chr3 (159-244)||(1051310-1051395)
chr3 (159-246)||(16309658-16309745)
chr3 (159-246)||(18490652-18490739)
chr3 (159-244)||(25760020-25760105)
chr3 (173-232)||(10623242-10623301)
chr3 (159-244)||(26430257-26430342)
chr3 (159-244)||(26953944-26954029)
chr3 (154-254)||(19185066-19185166)
chr3 (159-244)||(16037957-16038042)
chr3 (159-244)||(16041502-16041587)
chr3 (167-244)||(19826413-19826490)
chr3 (173-244)||(51661680-51661751)
chr3 (173-239)||(47165893-47165959)
chr3 (159-244)||(3736481-3736566)
chr3 (159-244)||(16053453-16053538)
chr3 (159-244)||(18517678-18517763)
chr3 (174-246)||(19256125-19256197)
chr3 (181-233)||(27943628-27943680)
chr3 (165-240)||(33537305-33537380)
chr3 (173-246)||(3569478-3569551)
chr3 (189-233)||(20952399-20952443)
[»] chr1 (37 HSPs)
chr1 (149-254)||(16816217-16816322)
chr1 (173-254)||(19054392-19054473)
chr1 (173-244)||(34528926-34528997)
chr1 (167-246)||(18332702-18332781)
chr1 (159-246)||(27035845-27035932)
chr1 (159-247)||(10433194-10433282)
chr1 (159-245)||(21487829-21487915)
chr1 (159-244)||(10423794-10423879)
chr1 (154-243)||(13309367-13309456)
chr1 (160-244)||(43021729-43021814)
chr1 (348-408)||(16816395-16816455)
chr1 (165-244)||(12629248-12629327)
chr1 (159-254)||(33012744-33012839)
chr1 (159-244)||(19088874-19088959)
chr1 (159-244)||(41574292-41574376)
chr1 (189-245)||(17122828-17122884)
chr1 (173-245)||(33064827-33064899)
chr1 (173-240)||(10032095-10032162)
chr1 (167-246)||(15114141-15114220)
chr1 (167-246)||(15120865-15120944)
chr1 (167-246)||(15127157-15127236)
chr1 (167-246)||(15145053-15145132)
chr1 (191-245)||(41917077-41917131)
chr1 (159-244)||(907652-907737)
chr1 (186-235)||(3833446-3833495)
chr1 (167-244)||(34517679-34517756)
chr1 (154-254)||(24230171-24230271)
chr1 (159-246)||(2583072-2583159)
chr1 (189-244)||(21813163-21813218)
chr1 (173-246)||(9266081-9266154)
chr1 (159-244)||(11779318-11779403)
chr1 (189-246)||(15318104-15318160)
chr1 (159-244)||(16280431-16280516)
chr1 (351-388)||(20149914-20149951)
chr1 (159-240)||(23487455-23487536)
chr1 (186-235)||(31893123-31893172)
chr1 (159-239)||(26505887-26505967)
[»] chr2 (31 HSPs)
chr2 (159-254)||(28522842-28522937)
chr2 (173-243)||(40926468-40926538)
chr2 (173-246)||(1490652-1490725)
chr2 (173-244)||(17151295-17151366)
chr2 (159-244)||(20477425-20477510)
chr2 (344-396)||(28522698-28522750)
chr2 (189-244)||(36802288-36802343)
chr2 (159-244)||(17679707-17679792)
chr2 (156-245)||(20374107-20374196)
chr2 (159-244)||(22169959-22170044)
chr2 (173-237)||(13619101-13619165)
chr2 (160-244)||(38242129-38242213)
chr2 (343-413)||(25652970-25653040)
chr2 (159-245)||(38376857-38376943)
chr2 (177-246)||(6083733-6083802)
chr2 (159-244)||(12102809-12102894)
chr2 (159-244)||(17377499-17377584)
chr2 (351-396)||(28698031-28698076)
chr2 (159-244)||(34454890-34454975)
chr2 (189-245)||(20434205-20434261)
chr2 (173-244)||(17678296-17678367)
chr2 (189-244)||(24524099-24524154)
chr2 (189-244)||(26916628-26916683)
chr2 (191-246)||(27206407-27206462)
chr2 (186-244)||(28948870-28948929)
chr2 (159-246)||(29216601-29216688)
chr2 (159-246)||(29329900-29329987)
chr2 (190-244)||(24270841-24270895)
chr2 (190-243)||(24297342-24297395)
chr2 (186-235)||(32234446-32234495)
chr2 (154-254)||(3914233-3914333)
[»] scaffold0114 (1 HSPs)
scaffold0114 (149-254)||(2959-3064)
[»] chr4 (23 HSPs)
chr4 (173-254)||(34657920-34658001)
chr4 (159-232)||(37005894-37005967)
chr4 (159-244)||(11415968-11416053)
chr4 (173-244)||(39406824-39406895)
chr4 (173-244)||(44673682-44673753)
chr4 (159-244)||(8667091-8667175)
chr4 (173-233)||(19298816-19298877)
chr4 (189-245)||(11485220-11485276)
chr4 (165-244)||(23795462-23795541)
chr4 (173-244)||(25219653-25219724)
chr4 (189-244)||(33040597-33040652)
chr4 (154-244)||(34512060-34512150)
chr4 (159-244)||(1924647-1924732)
chr4 (354-399)||(3007482-3007527)
chr4 (173-246)||(4936023-4936096)
chr4 (189-246)||(18234240-18234297)
chr4 (347-396)||(39407012-39407061)
chr4 (189-244)||(6192585-6192640)
chr4 (175-246)||(18487445-18487515)
chr4 (358-396)||(20380427-20380465)
chr4 (159-244)||(3007276-3007361)
chr4 (165-246)||(15159402-15159483)
chr4 (173-244)||(41068856-41068928)
[»] scaffold0911 (1 HSPs)
scaffold0911 (173-244)||(2226-2297)
[»] scaffold1667 (1 HSPs)
scaffold1667 (173-246)||(710-783)
[»] scaffold0886 (1 HSPs)
scaffold0886 (173-246)||(2780-2853)
[»] scaffold0166 (2 HSPs)
scaffold0166 (173-254)||(8005-8086)
scaffold0166 (343-387)||(8181-8225)
[»] scaffold0044 (1 HSPs)
scaffold0044 (173-246)||(20856-20929)
[»] scaffold0607 (1 HSPs)
scaffold0607 (161-244)||(302-385)
[»] scaffold0012 (3 HSPs)
scaffold0012 (173-244)||(103706-103777)
scaffold0012 (159-244)||(55769-55854)
scaffold0012 (179-243)||(52710-52774)
[»] scaffold0111 (1 HSPs)
scaffold0111 (156-245)||(41225-41314)
[»] scaffold0291 (1 HSPs)
scaffold0291 (173-239)||(21881-21947)
[»] scaffold0093 (1 HSPs)
scaffold0093 (159-244)||(16024-16109)
[»] scaffold0029 (2 HSPs)
scaffold0029 (159-244)||(129421-129506)
scaffold0029 (354-399)||(129258-129303)
[»] scaffold0006 (1 HSPs)
scaffold0006 (159-244)||(36665-36750)
[»] scaffold0002 (2 HSPs)
scaffold0002 (159-244)||(307238-307323)
scaffold0002 (354-399)||(307075-307120)
[»] scaffold0176 (1 HSPs)
scaffold0176 (160-244)||(26452-26535)
[»] scaffold0356 (1 HSPs)
scaffold0356 (188-235)||(13734-13781)
[»] scaffold0265 (1 HSPs)
scaffold0265 (189-244)||(19591-19646)
[»] scaffold0134 (1 HSPs)
scaffold0134 (189-244)||(2481-2536)
[»] scaffold0045 (1 HSPs)
scaffold0045 (191-246)||(80333-80388)
[»] scaffold0238 (1 HSPs)
scaffold0238 (173-239)||(4444-4510)
[»] scaffold0196 (1 HSPs)
scaffold0196 (173-215)||(793-835)
[»] scaffold0041 (1 HSPs)
scaffold0041 (191-245)||(3417-3471)
[»] scaffold0363 (1 HSPs)
scaffold0363 (159-244)||(5289-5374)
[»] scaffold0236 (1 HSPs)
scaffold0236 (165-246)||(6404-6485)
[»] scaffold0015 (1 HSPs)
scaffold0015 (347-396)||(2299-2348)
[»] scaffold0013 (1 HSPs)
scaffold0013 (187-244)||(100977-101033)
[»] scaffold0007 (1 HSPs)
scaffold0007 (189-246)||(173866-173923)
[»] scaffold0292 (1 HSPs)
scaffold0292 (159-215)||(21249-21305)
[»] scaffold0024 (1 HSPs)
scaffold0024 (189-245)||(160305-160361)


Alignment Details
Target: chr8 (Bit Score: 88; Significance: 5e-42; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 9078940 - 9078806
Alignment:
Q  9 agcataggtgatggcaagcaaaacaaagatttacattgtcttggagttggttaatggaggagaactatttgacaaaattgtaagttgttt--cctttatt 106  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |    
T  9078940 agcacaggtgatggcaagcaaaacaaagatttacattgttttggagttggttaatggaggagaactatttgacaaaattgtaagttgtttgatcttttat 9078841  T
Q  107 tcacatttcccc-ctttttacttgttttggaacat 140  Q
    ||| ||||||||  |||||||||||||||||||||    
T  9078840 tcatatttccccattttttacttgttttggaacat 9078806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 9087717 - 9087583
Alignment:
Q  9 agcataggtgatggcaagcaaaacaaagatttacattgtcttggagttggttaatggaggagaactatttgacaaaattgtaagttgttt--cctttatt 106  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||  |    
T  9087717 agcacaggtgatggcaagcaaaacaaagatttacattgttttggagttggttaatggaggagaactatttgacaaaattgtaagttgtttgatcttttat 9087618  T
Q  107 tcacatttcccc-ctttttacttgttttggaacat 140  Q
    ||| ||||||||  |||||||||||||||||||||    
T  9087617 tcatatttccccattttttacttgttttggaacat 9087583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 16290941 - 16290856
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||| ||||||| |||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||    
T  16290941 ggagaaaggacaaacatcaagaggcaacaccgacatcccaactaggttggcaccccgggaaacctccatcctatgctgccaaactc 16290856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 24184743 - 24184825
Alignment:
Q  158 gggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||    
T  24184743 gggagagaggacaaacatcaagagggaacaccgacatcccaactaggttggcatcccgggaaccctccatcctatgccgccaa 24184825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 18036807 - 18036880
Alignment:
Q  157 cgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcct 230  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||||    
T  18036807 cgggagagaggacaaacatcaagaggaaacaccgacatcccaactatgttggcaccccgaggaacctccatcct 18036880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 26657752 - 26657667
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  |||||||||||| ||||||||||||||||| | ||||||  |||| ||||||||||||||||| ||||||||    
T  26657752 ggagagaggacatgcatcaagaggaaacaccgacatcccaactaagttggcacttcgggaaacctccatcctatgccaccaaactc 26657667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 24317487 - 24317392
Alignment:
Q  156 ccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaattttta 252  Q
    ||||||||||| |||  |||||||||||| |||| |||| ||||||||| ||||||||| ||||||||| ||||||||||||||| ||||| |||||    
T  24317487 ccgggagagagaacatacatcaagaggaaacaccaacataccaactaggttggcacccc-gggaacctctatcctatgccgccaatctcaaatttta 24317392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 21593268 - 21593181
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  |||||||||| | || |||||| ||||||||| |||||||||| |  |||| ||||||||||||||||||||||    
T  21593268 ggagagaggacaggcatcaagaggcatcatcgacattccaactaggttggcaccccgagagaccttcatcctatgccgccaaactcaa 21593181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 23595462 - 23595375
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  |||||||||| | || |||||||||||||||| ||| |||| | |  |||||||||||||||||||||||||||    
T  23595462 ggagagaggacacgcatcaagaggcatcatcgacatcccaactaggttggtaccctgagagacctccatcctatgccgccaaactcaa 23595375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 23604384 - 23604297
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  |||||||||| | || |||||||||||||||| ||| |||| | |  |||||||||||||||||||||||||||    
T  23604384 ggagagaggacacgcatcaagaggcatcatcgacatcccaactaggttggtaccctgagagacctccatcctatgccgccaaactcaa 23604297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 26867541 - 26867458
Alignment:
Q  161 agagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||  | |||||||| | || |||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||    
T  26867541 agagaggacaggcttcaagaggcatcatcgacatcccaactaggttggcacctcgggaaacctccatcctacgccgccaaactc 26867458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 44418 - 44337
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttatt 254  Q
    |||||| ||||| |||||| ||||||| |||| ||| |||||||| ||||||||| |||||| ||||||||||| |||||||    
T  44418 catcaaaaggaaacaccgaaatcccaattaggttggtaccccgggaaacctccatactatgcagccaaactcaaattttatt 44337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 10568293 - 10568378
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  |||||||||| | || |||| | ||||||||| |||||||||| | ||| ||||||||||||||||||||||    
T  10568293 ggagagaggacagacatcaagaggcaacatcgacttaccaactaggttggcaccccgagaaacttccatcctatgccgccaaactc 10568378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 43856173 - 43856117
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    |||||||||||||||| ||||||||||  ||||||||||||| ||||||||||||||    
T  43856173 cgacatcccaactaggttggcaccccgcagaacctccatcctgtgccgccaaactca 43856117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 16890059 - 16889972
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  ||||| |||  | || |||||||||||||||| |||||||||| |  ||||||||| |||||||||||||||||    
T  16890059 ggagagaggacaggcatcaggagtcatcatcgacatcccaactaggttggcaccccgagatacctccatcttatgccgccaaactcaa 16889972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 45268828 - 45268913
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  |||||||||| | || |||| | ||||| ||| |||||||||| | ||||||| ||||||||||||||||||    
T  45268828 ggagagaggacaggcatcaagaggcaacatcgacttaccaaccaggttggcaccccgagaaacctccttcctatgccgccaaactc 45268913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 29840916 - 29840865
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    |||||||||||||||| |||||||||| | |||||||||| |||||||||||    
T  29840916 cgacatcccaactaggttggcaccccgagaaacctccatcatatgccgccaa 29840865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 26393352 - 26393418
Alignment:
Q  176 caagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaac 242  Q
    |||||| || || |||||||||||||| | || ||||||| | ||||||||||||||||||||||||    
T  26393352 caagagaaaacaacgacatcccaactaagttgccaccccgcgaaacctccatcctatgccgccaaac 26393418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 6001507 - 6001422
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||| ||| |||||| | || |||||| ||||||||| || |||| || | ||||| |||||||| |||||||||||    
T  6001507 ggagagaggacaaacattaagaggcaacatcgacattccaactaggttgacaccgcgagaaaccttcatcctataccgccaaactc 6001422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 347 - 396
Target Start/End: Original strand, 10568537 - 10568586
Alignment:
Q  347 acagattaaggaaatttgtagtttggaagaccacatctatcccgaaagaa 396  Q
    ||||||||||||||| ||||||| || | |||||||||||||||||||||    
T  10568537 acagattaaggaaatctgtagttaggtaaaccacatctatcccgaaagaa 10568586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 19742100 - 19742051
Alignment:
Q  186 caccgacatcccaactaggatggcaccccggggaacctccatcctatgcc 235  Q
    ||||||||||||||||||| |||||||||||| | |||||||||| ||||    
T  19742100 caccgacatcccaactaggttggcaccccgggaagcctccatcctgtgcc 19742051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 43848109 - 43848181
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    ||||||| |||| || | |||||||||||||| ||||||||||  |||||  |||||||||||||||| ||||    
T  43848109 catcaaggggaagcaacaacatcccaactaggttggcaccccgcagaaccctcatcctatgccgccaatctca 43848181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 474
Target Start/End: Complemental strand, 9078804 - 9078761
Alignment:
Q  431 tgaagttgtgtttctcaaagtatattgatgtttgcatattaaga 474  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||    
T  9078804 tgaagttgtgtttctcaaaatatattaatgtttgcatataaaga 9078761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 474
Target Start/End: Complemental strand, 9087581 - 9087538
Alignment:
Q  431 tgaagttgtgtttctcaaagtatattgatgtttgcatattaaga 474  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||    
T  9087581 tgaagttgtgtttctcaaaatatattaatgtttgcatataaaga 9087538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 16932556 - 16932651
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttatt 254  Q
    ||||||||||||  |||||||  ||| || |||||| ||||||| | ||||||||||  ||||  ||||||||| ||||||| ||||| |||||||    
T  16932556 ggagagaggacatacatcaaggagaaacaacgacattccaactatgttggcaccccgatgaactcccatcctataccgccaatctcaaattttatt 16932651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 21499362 - 21499420
Alignment:
Q  186 caccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||||||||| ||||||| | |  |||||| |||||| ||||||||||||    
T  21499362 caccgacatcccaactaggttggcaccgcagaaaacctcaatcctacgccgccaaactc 21499420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 14413422 - 14413337
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||| ||||||| || | || |||||||||||||||| ||||||| || |  ||||||||||| ||| |||| ||||    
T  14413422 ggagagtggacaaacatcaagcggcatcatcgacatcccaactaggttggcacctcgagacacctccatcctctgctgccacactc 14413337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Original strand, 25328795 - 25328832
Alignment:
Q  356 ggaaatttgtagtttggaagaccacatctatcccgaaa 393  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  25328795 ggaaatctgtagtttggaagaccacatctatcacgaaa 25328832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 29250256 - 29250320
Alignment:
Q  179 gaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| ||||| ||| ||||||||| ||||| || ||| ||||||| ||||||||||||||||||    
T  29250256 gaggaaacaccggcataccaactaggttggcatcc-gggaaacctccgtcctatgccgccaaactc 29250320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 40263681 - 40263730
Alignment:
Q  191 acatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    |||||||||||||| |||||||| |  ||||| |||||||||||||||||    
T  40263681 acatcccaactaggttggcaccctgcagaacccccatcctatgccgccaa 40263730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 383
Target Start/End: Complemental strand, 44247 - 44207
Alignment:
Q  343 taccacagattaaggaaatttgtagtttggaagaccacatc 383  Q
    ||||||||| ||||||||| ||||||| |||||||||||||    
T  44247 taccacagactaaggaaatatgtagttaggaagaccacatc 44207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 16043682 - 16043722
Alignment:
Q  206 tggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||| | | ||||||||||||||||||||||||||||    
T  16043682 tggcaccctgcgaaacctccatcctatgccgccaaactcaa 16043722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 41600808 - 41600724
Alignment:
Q  160 gagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||| |||||  |||||||||| | || ||| |||||||||||  |||||||||| | ||| | ||||||||||||| ||||||    
T  41600808 gagagtggacatgcatcaagaggcaacatcgatatcccaactagattggcaccccgagaaactttcatcctatgccgctaaactc 41600724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 2e-26; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 2259388 - 2259485
Alignment:
Q  157 cgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttatt 254  Q
    |||||||| |||||  |||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||||||| |||||||    
T  2259388 cgggagagtggacatgcatcaagaggaaacaccgacatcccaactaggttggcatcccgggaaacctccatcctatgcagccaaactcaaattttatt 2259485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 21711531 - 21711612
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||| | ||||||||||||||||||||    
T  21711531 ggagagaggacaagcatcaagagggaacaccgacatcccaactaggttggcaccccgggaaccctccatcctatgccgccaa 21711612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 15614823 - 15614744
Alignment:
Q  158 gggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgc 237  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  15614823 gggagagaggacaagcatcaagagggaacaccgacatcccaactaggttggcaccccgggaaccctccatcctatgccgc 15614744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 24765508 - 24765589
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttatt 254  Q
    ||||||||||||  |||||||||||||||||  ||||| |||||| ||||||| || ||||| ||||||||||| |||||||    
T  24765508 catcaagaggaaataccgacatcccaactagattggcatcccgggaaacctccctcatatgcagccaaactcaaattttatt 24765589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 19068688 - 19068772
Alignment:
Q  160 gagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||  ||| |||||| | || |||||||| ||||||| |||||||| | | ||||||||||||||||||||||||||    
T  19068688 gagagaggacagacattaagaggcaacatcgacatccaaactaggttggcaccctgagaaacctccatcctatgccgccaaactc 19068772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 21027039 - 21027095
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||    
T  21027039 cgacatcccaactaggttggcaccccgcagaacccccatcctatgccgccaaactca 21027095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 4120605 - 4120523
Alignment:
Q  158 gggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    ||||||||||| || |||||||||| | ||||||||||||||||||| |||||||| ||| | ||| ||| ||||||| ||||    
T  4120605 gggagagaggataaacatcaagagggaacaccgacatcccaactaggttggcaccctgggaacccttcattctatgccaccaa 4120523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 22602038 - 22602111
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||| |||| || |||||||||||||||| ||||||||||  ||||| ||||||||||||| ||| |||||    
T  22602038 catcaaggggaatcaacgacatcccaactaggttggcaccccgcagaacccccatcctatgccgtcaacctcaa 22602111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 35341973 - 35341889
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  |||||||||  | || |||||||||||||||  |||||||||| |  |||||||||||||||||||||||||    
T  35341973 ggagagaggacaggcatcaagagtcatcatcgacatcccaactagt-tggcaccccgagatacctccatcctatgccgccaaactc 35341889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 39324353 - 39324426
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||| | || |||||||||||||||| |||||| ||| |  ||||||||||||| |||||||||||||    
T  39324353 catcaagaggcatcatcgacatcccaactaggttggcactccgagagacctccatcctataccgccaaactcaa 39324426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 21877894 - 21877970
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgcc 235  Q
    |||||| |||||| ||||||| || | || |||||||||||||||| |||||||||| |  ||||||||||||||||    
T  21877894 ggagagtggacaaacatcaagcggcatcatcgacatcccaactaggttggcaccccgagacacctccatcctatgcc 21877970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 28637694 - 28637626
Alignment:
Q  168 acaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccg 236  Q
    |||| ||||||| |||| |  |||||||||||||||| |||||||||| |||||| |||||||||||||    
T  28637694 acaagcatcaaggggaagcgacgacatcccaactaggttggcaccccgaggaacccccatcctatgccg 28637626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 28682764 - 28682830
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgcca 239  Q
    |||||||||| | || |||||||||||||||| ||||| |||| |  ||||||||||||||||||||    
T  28682764 catcaagaggcatcatcgacatcccaactaggttggcatcccgagagacctccatcctatgccgcca 28682830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 5781073 - 5781158
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||| |||||||  ||| |||||| | || |||||||||||||||| ||||| |||| | ||| ||||||||||||| ||||||||    
T  5781073 ggagggaggacagacattaagaggcaacatcgacatcccaactaggttggcatcccgagaaacttccatcctatgccaccaaactc 5781158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 11725703 - 11725648
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||| |||| |||||| ||| |  |||||||||||||||||||||||||    
T  11725703 cgacatcccaattaggttggcactccgagagacctccatcctatgccgccaaactc 11725648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 34995472 - 34995527
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||||| |||||||||| |  | |||||||||||||| ||||||||    
T  34995472 cgacatcccaactaggttggcaccccgagataactccatcctatgccaccaaactc 34995527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 29998565 - 29998651
Alignment:
Q  160 gagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||  |||||||||  | || |||||||||||||||| ||||| | |  |  ||||||||| |||||||||||||||||    
T  29998565 gagagaggacaggcatcaagagacatcatcgacatcccaactaggttggcatctcaagagacctccatcgtatgccgccaaactcaa 29998651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 384
Target Start/End: Original strand, 2259569 - 2259610
Alignment:
Q  343 taccacagattaaggaaatttgtagtttggaagaccacatct 384  Q
    ||||||||| ||||||||| ||||||| ||||||||||||||    
T  2259569 taccacagactaaggaaatctgtagttaggaagaccacatct 2259610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 31329270 - 31329351
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    ||||||||||||  |||||||||| | || |||||| ||||||||  ||| | |||| |  |||||||||||||||||||||    
T  31329270 ggagagaggacaggcatcaagaggcatcatcgacattccaactagattggtatcccgagatacctccatcctatgccgccaa 31329351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 32038414 - 32038498
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||| ||| ||||||||| ||  ||||||||  |||||| | ||| |||  ||| ||||||||||||||||||||||||||    
T  32038414 ggagagagg-caaacatcaagagaaaataccgacatttcaactaagttggtaccttgggaaacctccatcctatgccgccaaactc 32038498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 13642802 - 13642882
Alignment:
Q  160 gagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    |||||||||||  ||||| |||| | || |||||| ||||||||  ||| |||||| |  |||||||||||||||||||||    
T  13642802 gagagaggacagacatcaggaggcatcatcgacattccaactagattggtaccccgagatacctccatcctatgccgccaa 13642882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 24765684 - 24765728
Alignment:
Q  343 taccacagattaaggaaatttgtagtttggaagaccacatctatc 387  Q
    ||||||||| || |||||| ||||||| |||||||||||||||||    
T  24765684 taccacagactatggaaatctgtagttaggaagaccacatctatc 24765728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 981004 - 980917
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||| |||||||||| | | ||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  981004 ggagagaggacaaacatcaagaggcagctccgacatcccaactaggttggcactccggagaacctccatcctatgccgccaaactcaa 980917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 150 - 254
Target Start/End: Complemental strand, 10996468 - 10996364
Alignment:
Q  150 gatgaaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaattt 249  Q
    |||||| |||||||||||| || |||||||||||| |||||| ||| |||||| | ||||||||| || ||  |||||||||||||||||||||||| ||    
T  10996468 gatgaatcgggagagaggaaaaacatcaagaggaaacaccgatatctcaactaagttggcaccccaggaaaattccatcctatgccgccaaactcaaatt 10996369  T
Q  250 ttatt 254  Q
    |||||    
T  10996368 ttatt 10996364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 1862350 - 1862407
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  1862350 cgacatcccaactaggttggcaccccggagaacctccatcctatgccgccaaactcaa 1862407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 1537965 - 1538036
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||| ||||||||||||||||||| || ||||  ||| ||||||||||||||||||||||||||    
T  1537965 catcaagaggaaacaccgacatcccaactaggttgccacctagggaaacctccatcctatgccgccaaactc 1538036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 1633389 - 1633304
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  |||||||||||| ||||||||  ||||||||| || ||||||| | |||||| |||||||||||||||||||    
T  1633389 ggagagaggacatgcatcaagaggaaacaccgacaatccaactaggttgacaccccgagaaacctcaatcctatgccgccaaactc 1633304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 345 - 396
Target Start/End: Complemental strand, 10995718 - 10995667
Alignment:
Q  345 ccacagattaaggaaatttgtagtttggaagaccacatctatcccgaaagaa 396  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  10995718 ccacagattagggaaatttgtagtttggaagaccacatctattccgaaagaa 10995667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 12163466 - 12163393
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||| | ||||||||||||||||||| ||||||| |||| |||||||||| | ||||||||| |||||    
T  12163466 catcaagaggcaacaccgacatcccaactaggttggcacctcgggaaacctccatcgtctgccgccaacctcaa 12163393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 22849547 - 22849604
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||||||| |||||||||| |  ||||| |||||||||||||||||||||    
T  22849547 cgacatcccaactaggttggcaccccgagatacctctatcctatgccgccaaactcaa 22849604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 14073873 - 14073790
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaact 243  Q
    |||||||||||| | ||||||||| | || |||| | ||||||||| |||||||| | | |||||||||||||||||||||||||    
T  14073873 ggagagaggacagc-atcaagaggcaacatcgacttaccaactaggttggcaccctgagaaacctccatcctatgccgccaaact 14073790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 14383901 - 14383818
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaact 243  Q
    |||||||||||| | ||||||||| | || |||| | ||||||||| |||||||| | | |||||||||||||||||||||||||    
T  14383901 ggagagaggacagc-atcaagaggcaacatcgacttaccaactaggttggcaccctgagaaacctccatcctatgccgccaaact 14383818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 28780265 - 28780181
Alignment:
Q  160 gagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||  |||||||||| | || |||||||||||||||| ||||| |||  | || || ||||||||||||||||||||    
T  28780265 gagagaggacatgcatcaagaggcaacatcgacatcccaactaggttggcatcccaagaaatcttcatcctatgccgccaaactc 28780181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 37375085 - 37375017
Alignment:
Q  168 acaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccg 236  Q
    |||| ||||||| |||| |  |||||||||||||||| |||||||||| |||||| |||||||||||||    
T  37375085 acaagcatcaaggggaagcgacgacatcccaactaggttggcaccccgaggaacccccatcctatgccg 37375017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 38993120 - 38993176
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||||||||||| ||||    
T  38993120 cgacatcccaactaggttggcaccccgcagaacccccatcctatgccgccaatctca 38993176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 20382386 - 20382331
Alignment:
Q  191 acatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||||| ||||||||||  ||||| ||||||||||||||||| |||||    
T  20382386 acatcccaactaggttggcaccccgcagaacccccatcctatgccgccaatctcaa 20382331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 347 - 396
Target Start/End: Complemental strand, 28780063 - 28780014
Alignment:
Q  347 acagattaaggaaatttgtagtttggaagaccacatctatcccgaaagaa 396  Q
    ||||||||||||||||||||||| || | ||||||||||||| |||||||    
T  28780063 acagattaaggaaatttgtagttaggtaaaccacatctatcctgaaagaa 28780014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 2040072 - 2040148
Alignment:
Q  160 gagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccg 236  Q
    |||| ||||||  ||| |||||| | ||||||||||||||||||| ||||| ||||  |||||| ||||||||||||    
T  2040072 gagaaaggacatacatgaagaggtagcaccgacatcccaactaggttggcatcccgatgaaccttcatcctatgccg 2040148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 4463454 - 4463509
Alignment:
Q  190 gacatcccaactaggatggcaccccggggaacctccatcctatg-ccgccaaactc 244  Q
    ||||||||||||||| ||||||||| || | ||||||||||||| |||||||||||    
T  4463454 gacatcccaactaggttggcaccccaggaagcctccatcctatgcccgccaaactc 4463509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 11295393 - 11295448
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||| ||||||| |||||| ||| | |||||| |||||||||||||||||||    
T  11295393 cgacatccaaactaggttggcactccgagaaacctctatcctatgccgccaaactc 11295448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 12727872 - 12727806
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgcca 239  Q
    |||||||||| | || |||||||||||||||| ||||| |||| |  ||| ||||||||||||||||    
T  12727872 catcaagaggcatcatcgacatcccaactaggttggcatcccgagagacccccatcctatgccgcca 12727806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 3399544 - 3399629
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||| |  |||||| ||| | || |||| | ||||||||| |||||||||| | ||||| |||||||||||| |||||||    
T  3399544 ggagagaggatagacatcaaaaggcaacatcgacttaccaactaggttggcaccccgagaaaccttcatcctatgccgtcaaactc 3399629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 11842813 - 11842764
Alignment:
Q  186 caccgacatcccaactaggatggcaccccggggaacctccatcctatgcc 235  Q
    ||||||||||||||||||| ||| |||||||| | |||||| ||||||||    
T  11842813 caccgacatcccaactaggttggtaccccgggaagcctccaccctatgcc 11842764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 396
Target Start/End: Complemental strand, 14073674 - 14073625
Alignment:
Q  347 acagattaaggaaatttgtagtttggaagaccacatctatcccgaaagaa 396  Q
    ||||||||||||||| ||| ||| || | |||||||||||||||||||||    
T  14073674 acagattaaggaaatctgttgttaggtaaaccacatctatcccgaaagaa 14073625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 396
Target Start/End: Complemental strand, 14383702 - 14383653
Alignment:
Q  347 acagattaaggaaatttgtagtttggaagaccacatctatcccgaaagaa 396  Q
    ||||||||||||||| ||| ||| || | |||||||||||||||||||||    
T  14383702 acagattaaggaaatctgttgttaggtaaaccacatctatcccgaaagaa 14383653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 28937406 - 28937357
Alignment:
Q  186 caccgacatcccaactaggatggcaccccggggaacctccatcctatgcc 235  Q
    ||||||||||||||||||| ||||| |||||  | |||||||||||||||    
T  28937406 caccgacatcccaactaggttggcatcccggaaagcctccatcctatgcc 28937357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0437 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0437
Description:

Target: scaffold0437; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 11500 - 11418
Alignment:
Q  158 gggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||| | ||||||||||||||||||||    
T  11500 gggagagaggacaaacatcaagagggaacaccgacatcccaactaggttggcaccccgggaaccctccatcctatgccgccaa 11418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0437; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 14323 - 14410
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  |||||||||| | || |||||||||||||||| ||||| |||| |  |||||||||||||||||||||||||||    
T  14323 ggagagaggacagacatcaagaggcatcatcgacatcccaactaggttggcatcccgagagacctccatcctatgccgccaaactcaa 14410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 14641522 - 14641440
Alignment:
Q  158 gggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||| | ||||||||||||||||||||    
T  14641522 gggagagaggacaaacatcaagagggaacaccgacatcccaactaggttggcaccccgggaaccctccatcctatgccgccaa 14641440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 20589728 - 20589631
Alignment:
Q  149 ggatgaaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||| |||| ||||| ||||||  |||||||||| ||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  20589728 ggataaaccaggagaaaggacaggcatcaagagggacctccgacatctcaactaggttggcaccccggagaacctccatcctatgccgccagactcaa 20589631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 20899047 - 20898962
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||| ||||||||| || |||||||| ||||||| |||||||||    
T  20899047 ggagagaggacaagcatcaagaggcaacaccgacatcccaactaggttggcaccccaggaaacctccaccctatgctgccaaactc 20898962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 34338087 - 34338174
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||| |||| ||||||||||||| || |||||||||||||||| |||||||||| |  |||||||||||||||||||||| ||||    
T  34338087 ggagagatgacagccatcaagaggaatcatcgacatcccaactaggttggcaccccgagagacctccatcctatgccgccaaattcaa 34338174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 24617716 - 24617821
Alignment:
Q  149 ggatgaaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatt 248  Q
    |||| ||||||||| | |||||  |||||||||||| ||||||||||||||||||| |||||||||||  ||||||||||| || | |||| |||||| |    
T  24617716 ggataaaccgggagcgtggacatgcatcaagaggaaacaccgacatcccaactaggttggcaccccggaaaacctccatcccatacagccacactcaaat 24617815  T
Q  249 tttatt 254  Q
    ||||||    
T  24617816 tttatt 24617821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 232
Target Start/End: Original strand, 8483615 - 8483698
Alignment:
Q  149 ggatgaaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctat 232  Q
    |||| ||||||||| | |||||  |||||||||||| ||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  8483615 ggataaaccgggagcgtggacatgcatcaagaggaaacacggacatcccaactaggttggcaccccggggaacctctatcctat 8483698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 841311 - 841390
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccg-gggaacctccatcctatgccgccaaactcaattttt 251  Q
    ||||| ||| || ||||||||||||||||| | |||||||||| |||||||||||||||||| |||||||||||| ||||    
T  841311 catcatgagaaaacaccgacatcccaactaagttggcaccccgagggaacctccatcctatgtcgccaaactcaaatttt 841390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 1448859 - 1448788
Alignment:
Q  175 tcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||| ||||||||||| |||||||  |||||| ||| ||||||| |||||||||||||||||||||    
T  1448859 tcaagaggaagcaccgacatcctaactaggtcggcaccacggagaacctctatcctatgccgccaaactcaa 1448788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 12436039 - 12435952
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  ||||| |||| | || |||||||||||||||| ||||||||||   |||||||||||||||||||||| |||||    
T  12436039 ggagagaggacatgcatcaggaggcatcatcgacatcccaactaggttggcaccccgacaaacctccatcctatgccgccaagctcaa 12435952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 24127819 - 24127902
Alignment:
Q  161 agagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||  |||||||||| | || |||||||||| ||||| ||||||| || | ||||||||||||||||||||||||||    
T  24127819 agagaggacagacatcaagaggtatcatcgacatcccagctaggttggcacctcgagaaacctccatcctatgccgccaaactc 24127902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 13575087 - 13575005
Alignment:
Q  158 gggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    |||||||| ||||  |||||||||| | ||||||||||||||||||| |||||| ||||| ||||| |||||||| |||||||    
T  13575087 gggagagaagacatgcatcaagagggaacaccgacatcccaactaggttggcactccgggaaaccttcatcctataccgccaa 13575005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 13577626 - 13577544
Alignment:
Q  158 gggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    |||||||| ||||  |||||||||| | ||||||||||||||||||| |||||| ||||| ||||| |||||||| |||||||    
T  13577626 gggagagaagacatgcatcaagagggaacaccgacatcccaactaggttggcactccgggaaaccttcatcctataccgccaa 13577544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 24373599 - 24373513
Alignment:
Q  160 gagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||| ||||||  ||||| |||||| ||| ||||||||||||||| ||| |||| || ||||||||||||||||||||||| |||||    
T  24373599 gagaaaggacatgcatcacgaggaagcactgacatcccaactaggttggtaccctggagaacctccatcctatgccgccaatctcaa 24373513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 15141911 - 15141984
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||| ||||| |||| | ||||||||| |||||    
T  15141911 catcaagaggaaacaccgacatcccaactaggttggcaacccgggaaacctgcatcgtctgccgccaacctcaa 15141984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 9351147 - 9351199
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaa 241  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  9351147 cgacatcccaactaggttggcaccccgagaaacctccatcctatgccgccaaa 9351199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 11650897 - 11650837
Alignment:
Q  186 caccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||| |||||||||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  11650897 cacctacatcccaactaggttggcaccctagggaacctccatcttatgccgccaaactcaa 11650837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 3057022 - 3056935
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||| |||||  |||||||||  | || |||||||||||||| | ||| |||||| | ||||||||||||||||||||||||||||    
T  3057022 ggagagtggacaggcatcaagagacaacatcgacatcccaactaagttggtaccccgagaaacctccatcctatgccgccaaactcaa 3056935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 11319554 - 11319467
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  |||||||||||| |||| ||||| |||||||| |||||||  || ||||||| ||| |||||||||| ||||||    
T  11319554 ggagagaggacatgcatcaagaggaagcaccaacatctcaactaggttggcaccttggagaacctctatcttatgccgccatactcaa 11319467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 14372193 - 14372264
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||| | || |||||||||||||||| |||||| ||| | || |||||||||||||||||||||||    
T  14372193 catcaagaggcaacatcgacatcccaactaggttggcactccgagaaatctccatcctatgccgccaaactc 14372264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 26522780 - 26522725
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||||| |||||||||| |  |||||||||||||||||||||||||    
T  26522780 cgacatcccaactaggttggcaccccgagagacctccatcctatgccgccaaactc 26522725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 31633595 - 31633660
Alignment:
Q  179 gaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| ||||||||||||||||||  ||||| || ||| ||||||| ||||||||||||||||||    
T  31633595 gaggaaacaccgacatcccaactagattggcatcctgggaaacctccgtcctatgccgccaaactc 31633660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 30884490 - 30884390
Alignment:
Q  154 aaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttat 253  Q
    |||| ||||||||||||  |||||||  ||| || |||||||||||||||| || |||||||   ||| |||||||||| ||||||| ||||| ||||||    
T  30884490 aaccaggagagaggacatgcatcaaggagaatcaacgacatcccaactaggttgacaccccgataaacttccatcctataccgccaatctcaaattttat 30884391  T
Q  254 t 254  Q
    |    
T  30884390 t 30884390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 1110541 - 1110454
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||| ||||||  |||||||||||| || ||||||||||  || | |||||| ||| | |||||||||||| |||||||||||||||    
T  1110541 ggagaaaggacatacatcaagaggaaacaacgacatcccatttaagttggcactccgcgaaacctccatcctttgccgccaaactcaa 1110454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 13565999 - 13565913
Alignment:
Q  158 gggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||  |||||||||| | || |||||||||||||||| ||||||  |  | |||||| ||||||| |||||||||||    
T  13565999 gggagagaggacatgcatcaagagggaacaacgacatcccaactaggttggcacatcaagaaacctctatcctataccgccaaactc 13565913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 13570551 - 13570465
Alignment:
Q  158 gggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||  |||||||||| | |||| |||||||||||||  |||||||||| | ||| | |||||||| |||| ||||||    
T  13570551 gggagagaggacatgcatcaagagggaacacctacatcccaactagattggcaccccgagaaacattcatcctataccgcaaaactc 13570465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 10138926 - 10138869
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||||||| |||||||||| |  ||||| ||||||| |||||||||||||    
T  10138926 cgacatcccaactaggttggcaccccgagacacctctatcctataccgccaaactcaa 10138869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 26592515 - 26592600
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||| |||  |||||||||  | ||| ||||| ||||||||| ||| |||  ||| ||||||||||||||||||||||||||    
T  26592515 ggagagagaacatgcatcaagagagaacactgacattccaactaggttggtaccttgggaaacctccatcctatgccgccaaactc 26592600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 32569915 - 32569830
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  ||| |||||| | || |||||||||||||||  || |||| || | |||||| |||||||||||||||||||    
T  32569915 ggagagaggacagtcattaagaggcaacatcgacatcccaactagattgacacctcgagaaacctctatcctatgccgccaaactc 32569830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 7242877 - 7242941
Alignment:
Q  168 acaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctat 232  Q
    |||| |||||||||||| |  |||||||||||||||| |||||||||| |||||| |||| ||||    
T  7242877 acaagcatcaagaggaagcgacgacatcccaactaggttggcaccccgaggaacccccattctat 7242941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 8462078 - 8462014
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgc 237  Q
    |||||||||| | || |||||||||||||||| ||||||| || |  ||||||||||||||||||    
T  8462078 catcaagaggcatcatcgacatcccaactaggttggcacctcgagagacctccatcctatgccgc 8462014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 9696881 - 9696936
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||| | |||||| ||| |  |||||||||||||||||||||||||    
T  9696881 cgacatcccaactaagttggcacgccgagatacctccatcctatgccgccaaactc 9696936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 27962066 - 27962121
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||||| |||||||||| |  | |||||||||||||||||| ||||    
T  27962066 cgacatcccaactaggttggcaccccgagacatctccatcctatgccgccagactc 27962121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 24205545 - 24205471
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatg 233  Q
    ||||||||||||  |||| |||||||  | |||||||||||||| | |||||||| |  ||||||||||||||||    
T  24205545 ggagagaggacatgcatcgagaggaaagaacgacatcccaactaagttggcaccctgatgaacctccatcctatg 24205471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 8212248 - 8212333
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||| |||  |||||| | ||| || ||||||  ||| |||| |||||||||| | ||||||||||||||||||| ||||||    
T  8212248 ggagagagaacagacatcaacatgaaacagcgacatttcaattaggttggcaccccgcgaaacctccatcctatgccgctaaactc 8212333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 9344549 - 9344476
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||| || || |||||||||||||||| |||||| |||   |||||||| |||||||  ||||||||||    
T  9344549 catcaagagaaaacaacgacatcccaactaggttggcactccgcaaaacctccaccctatgcttccaaactcaa 9344476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 14982458 - 14982378
Alignment:
Q  176 caagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc--aatttttatt 254  Q
    ||||||| | || ||||||||||||| || || |||| || | ||| ||||||||||||||||||||||  ||||||||||    
T  14982458 caagaggcaacatcgacatcccaacttggttgacacctcgagaaacttccatcctatgccgccaaactctaaatttttatt 14982378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 18306721 - 18306805
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  ||||| |||  | || |||||||||||||||| ||||| |||| |  ||||||||||||||||| |||||||    
T  18306721 ggagagaggacaggcatcaggagtcatcatcgacatcccaactaggttggca-cccgagatacctccatcctatgccgtcaaactc 18306805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 12085574 - 12085546
Alignment:
Q  218 gaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||||||||||||||||||||    
T  12085574 gaacctccatcctatgccgccaaactcaa 12085546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 13580179 - 13580235
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    ||||||||| | |||| ||||||||||  ||||| ||||||||||||||||| ||||    
T  13580179 cgacatccccattaggttggcaccccgtagaacccccatcctatgccgccaacctca 13580235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 30492380 - 30492340
Alignment:
Q  206 tggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||| ||||  ||||||||||||||||||||||||||||    
T  30492380 tggcacaccggaaaacctccatcctatgccgccaaactcaa 30492340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 2379 - 2298
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||| | ||||||||||||||||||||    
T  2379 ggagagaggacaagcatcaagagggaacaccgacatcccaactaggttggcaccccgggaaccctccatcctatgccgccaa 2298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 1487 - 1572
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||||  ||||||||    
T  1487 ggagagaggacaagcatcaagaggcaacaccgacatcccaactaggttggcaccccgggaaacctccatcctatgcttccaaactc 1572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 4e-24; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 1051310 - 1051395
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||    
T  1051310 ggagagaggacaaacatcaagagggaacaccgacatcccaactaggttggcacctcgggaaacctccatcctaagccgccaaactc 1051395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 16309658 - 16309745
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  |||||||||| | |  |||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  16309658 ggagagaggacagacatcaagaggtagcttcgacatcccaactaagttggcaccccggagaacctccatcctatgccgccaaactcaa 16309745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 18490652 - 18490739
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  |||||||||| | |  |||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||    
T  18490652 ggagagaggacagacatcaagaggtagcttcgacatcccaactaagttggcaccccggagaacctccatcctatgccgccaaactcaa 18490739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 25760105 - 25760020
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||| ||||||  |||  |||||||||||||||| |||||||||    
T  25760105 ggagagaggacaagcatcaagaggcaacaccgacatcccaactaggttggcacttcggaaaacctccatcctatgctgccaaactc 25760020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 10623242 - 10623301
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctat 232  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||    
T  10623242 catcaagaggaaacaccgacatcctaactaggttggcaccccggggaacctccatcctat 10623301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 26430342 - 26430257
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  |||||||||| | || |||||||| ||||||| ||||||||||    |||||||||||||||||||||||||    
T  26430342 ggagagaggacatacatcaagaggcatcatcgacatcctaactaggttggcaccccgtaatacctccatcctatgccgccaaactc 26430257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 26953944 - 26954029
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||| ||||  |||||||||||| ||||||||||||||||||| ||||| | | |  |||||||||| |||||||||||||||    
T  26953944 ggagagacgacatgcatcaagaggaaacaccgacatcccaactaggttggcatctcagaaaacctccatcatatgccgccaaactc 26954029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 19185166 - 19185066
Alignment:
Q  154 aaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttat 253  Q
    |||| ||||||||||||  |||||||  ||| || |||||||||||||||| ||||||||||  ||||  ||||||||| || |||||||||| ||||||    
T  19185166 aaccaggagagaggacaggcatcaaggagaagcaacgacatcccaactaggttggcaccccgaagaactcccatcctataccaccaaactcaaattttat 19185067  T
Q  254 t 254  Q
    |    
T  19185066 t 19185066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 16038042 - 16037957
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||| ||||  |||||||||| | || ||||||| |||||||| ||| |||||| |  |||||||||||||||||||||||||    
T  16038042 ggagagatgacagacatcaagaggcatcatcgacatctcaactaggttggaaccccgagagacctccatcctatgccgccaaactc 16037957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 16041587 - 16041502
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||| ||||  |||||||||| | || ||||||| |||||||| ||| |||||| |  |||||||||||||||||||||||||    
T  16041587 ggagagatgacagacatcaagaggcatcatcgacatctcaactaggttggaaccccgagagacctccatcctatgccgccaaactc 16041502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 19826413 - 19826490
Alignment:
Q  167 gacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||| ||| |||||| | || |||||||||||||||| |||||||||  | ||||||| ||||||||||||||||||    
T  19826413 gacaagcattaagaggcaacatcgacatcccaactaggttggcaccccaagaaacctccgtcctatgccgccaaactc 19826490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 51661751 - 51661680
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||| | || |||||||||||||||| |||||||||| | |  ||||||||||||||| |||||||    
T  51661751 catcaagaggcaacatcgacatcccaactaggttggcaccccgagaactctccatcctatgccgtcaaactc 51661680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 47165893 - 47165959
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgcca 239  Q
    |||||||||| | || |||||||||||||||| |||||||||| |  | ||||||||||||||||||    
T  47165893 catcaagaggcatcatcgacatcccaactaggttggcaccccgagagaactccatcctatgccgcca 47165959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 3736566 - 3736481
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||| ||||||| || | || |||||||||||||||| |||||||||| |  ||||||||||| ||| |||| ||||    
T  3736566 ggagagtggacaaacatcaagcggcatcatcgacatcccaactaggttggcaccccgagacacctccatcctctgctgccacactc 3736481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 16053538 - 16053453
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||| ||||  |||||||||| | || ||||||| |||||||| || || |||| | |||||||||||||||| |||||||||    
T  16053538 ggagagatgacagacatcaagaggcatcatcgacatctcaactaggttgacatcccgagaaacctccatcctatgctgccaaactc 16053453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 18517763 - 18517678
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||  |||||||||| | || |||||||||||||||| ||||| |||| |  | ||||||||||||||| |||||||    
T  18517763 ggagagtggacatgcatcaagaggcaacatcgacatcccaactaggttggcatcccgagatagctccatcctatgccgtcaaactc 18517678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 19256197 - 19256125
Alignment:
Q  174 atcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||| || |||||||| ||||||| ||||||||||   || |||||| ||||| ||||||||||||    
T  19256197 atcaagaggaaacaacgacatcctaactaggttggcaccccgcaaaatctccattctatgtcgccaaactcaa 19256125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 27943628 - 27943680
Alignment:
Q  181 ggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatg 233  Q
    |||| ||||||||||||||||||| | |||||||  |||||||||||||||||    
T  27943628 ggaaacaccgacatcccaactaggttagcaccccatggaacctccatcctatg 27943680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 33537380 - 33537305
Alignment:
Q  165 aggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    ||||||| ||||||||| || |  |||||| ||||||||| ||||||| || |||||| | |||||||||||||||    
T  33537380 aggacaaacatcaagagaaagcgacgacattccaactaggttggcacctcgaggaaccccaatcctatgccgccaa 33537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 3569551 - 3569478
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||| || || ||| | ||||||| ||||| |||  | |||||||||||||||||||||| |||||    
T  3569551 catcaagaggaaacaacggcattctaactaggttggcatcccacgaaacctccatcctatgccgccaagctcaa 3569478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 20952443 - 20952399
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatg 233  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||||    
T  20952443 cgacatcccaactaggttggcaccccgcagaacccccatcctatg 20952399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 16816217 - 16816322
Alignment:
Q  149 ggatgaaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatt 248  Q
    |||| ||||||||||| |||||  |||||||||||| |||| |||||||||||||| |||| || ||||||||||||||||||||| | ||||||||| |    
T  16816217 ggataaaccgggagagtggacatgcatcaagaggaaacaccaacatcccaactaggttggcgcctcggggaacctccatcctatgcagtcaaactcaaat 16816316  T
Q  249 tttatt 254  Q
    ||||||    
T  16816317 tttatt 16816322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 19054392 - 19054473
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttatt 254  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||||| |||||||    
T  19054392 catcaagaggaaacaccgacatcccaactaggttggcaccccggggaacctccatcctatacagccacactcaaattttatt 19054473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 34528926 - 34528997
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||| || |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  34528926 catcaagaggaaacagcgacatcccaactaggttggcaccccgggaaacctccatcctatgccgccaaactc 34528997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 18332702 - 18332781
Alignment:
Q  167 gacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||| ||| ||||| || || |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  18332702 gacaagcattaagagaaaacatcgacatcccaactaggttggcaccccggagaacctccatcctatgccgccaaactcaa 18332781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 27035845 - 27035932
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||| |||||||||| | || |||||||||||||||| ||||| |||| |  |||||||||||||||||||||||||||    
T  27035845 ggagagaggacaagcatcaagaggcatcatcgacatcccaactaggttggcatcccgagagacctccatcctatgccgccaaactcaa 27035932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 10433282 - 10433194
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaat 247  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||| | ||||| ||| ||||||||||| ||||| ||||||| ||||    
T  10433282 ggagaaaggacaagcatcaagaggaagcaccgacatcccaactaggtttgcacctcggagaacctccatcatatgctgccaaacacaat 10433194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 21487829 - 21487915
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    |||||| |||||  ||||||||||||    |||||||||||||||| ||||||||||  ||||| ||||||||||||||||||||||    
T  21487829 ggagagtggacaggcatcaagaggaagtgacgacatcccaactaggttggcaccccgaagaacccccatcctatgccgccaaactca 21487915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 10423794 - 10423879
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||| |||||||||| | || |||||||||||||||| |||||||||| | |||||||||| ||||||  |||||||    
T  10423794 ggagagtggacaagcatcaagaggcaacatcgacatcccaactaggttggcaccccgagaaacctccatcttatgccctcaaactc 10423879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 13309367 - 13309456
Alignment:
Q  154 aaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaact 243  Q
    |||| |||||| |||||  |||||||||| | || |||||||||||||||| |||||||||| |  |||||||||||| |||||||||||    
T  13309367 aaccaggagagtggacaggcatcaagaggcatcatcgacatcccaactaggttggcaccccgagagacctccatcctaagccgccaaact 13309456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 43021729 - 43021814
Alignment:
Q  160 gagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaa-cctccatcctatgccgccaaactc 244  Q
    |||||||||||  ||||||||| || ||||||||  |||  |||| ||||||||||||||| ||||||||||||||||||||||||    
T  43021729 gagagaggacatgcatcaagagaaaacaccgacaaaccacttaggttggcaccccggggaaacctccatcctatgccgccaaactc 43021814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 16816395 - 16816455
Alignment:
Q  348 cagattaaggaaatttgtagtttggaagaccacatctatcccgaaagaagtccgagcctaa 408  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  16816395 cagactaaggaaatatgtagtttggaagaccacatctatcacgaaaaaagtcagagcctaa 16816455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 12629248 - 12629327
Alignment:
Q  165 aggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||| ||||  ||| || ||||||||||||||||||  ||||| |||||| ||||||| ||||||||||||||||||    
T  12629248 aggacaaacatcgggagaaaacaccgacatcccaactagattggcatcccgggaaacctccgtcctatgccgccaaactc 12629327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 33012839 - 33012744
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttatt 254  Q
    ||||||||||||| |||||||  ||| || |||||||||||||||| ||||||| ||  ||||  ||||||||| ||||||| ||||| |||||||    
T  33012839 ggagagaggacaaacatcaaggagaagcaacgacatcccaactaggttggcacctcgttgaactcccatcctataccgccaatctcaaattttatt 33012744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 19088959 - 19088874
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  |||||||||||| ||| |||||| ||| |||| ||| |||  ||| |||||||||| |||||||||||||||    
T  19088959 ggagagaggacatgcatcaagaggaaacactgacatctcaattaggttggaaccttgggaaacctccatcttatgccgccaaactc 19088874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 41574292 - 41574376
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||| ||||||  |||||| ||||| |||| |||||||||||||| || ||||| ||  ||||||||||||||||||||||||||    
T  41574292 ggagaaaggacagacatcaaaaggaaacaccaacatcccaactaggttgacaccctgga-aacctccatcctatgccgccaaactc 41574376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 17122884 - 17122828
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    |||||||||||||||| ||||||||||  |||||  |||||||||||||||||||||    
T  17122884 cgacatcccaactaggttggcaccccgcagaaccctcatcctatgccgccaaactca 17122828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 33064827 - 33064899
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    ||||||| |||| || |||||||||||||||| ||||||||||  ||||| ||||||||| ||||||| ||||    
T  33064827 catcaaggggaagcaacgacatcccaactaggttggcaccccgcagaacccccatcctataccgccaatctca 33064899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 10032095 - 10032162
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    |||||||||||| ||||||||||||||||||| ||  |||||||  || || ||||||||||||||||    
T  10032095 catcaagaggaaacaccgacatcccaactaggttgataccccggaaaaacttcatcctatgccgccaa 10032162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 15114141 - 15114220
Alignment:
Q  167 gacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||| ||||| |||||| ||| ||||| |||| |||| | ||||||| || |||||||||||||||| |||||||||||    
T  15114141 gacaaacatcaggaggaaacactgacatgccaattaggttagcaccccaggaaacctccatcctatgcagccaaactcaa 15114220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 15120865 - 15120944
Alignment:
Q  167 gacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||| ||||| |||||| ||| ||||| |||| |||| | |||||||||| |||||||||||||||| ||||| |||||    
T  15120865 gacaaacatcaggaggaaacactgacatgccaattaggttagcaccccgggaaacctccatcctatgctgccaagctcaa 15120944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 15127157 - 15127236
Alignment:
Q  167 gacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||| ||||| |||||| ||| ||||| |||| |||| | ||||||| || |||||||||||||||| |||||||||||    
T  15127157 gacaaacatcaggaggaaacactgacatgccaattaggttagcaccccaggaaacctccatcctatgcagccaaactcaa 15127236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 15145053 - 15145132
Alignment:
Q  167 gacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||| ||||| |||||| ||| ||||| |||| |||| | |||||||||| |||||||||||||||| ||||| |||||    
T  15145053 gacaaacatcaggaggaaacactgacatgccaattaggttagcaccccgggaaacctccatcctatgctgccaagctcaa 15145132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 41917131 - 41917077
Alignment:
Q  191 acatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||| ||| ||||    
T  41917131 acatcccaactaggttggcaccccggagaacccccatcctatgccgtcaatctca 41917077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 907652 - 907737
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||| ||||  |||||||||  | || |||||||||||||||  |||||||| | |  |||||||||||||||||||||||||    
T  907652 ggagagatgacagacatcaagagacatcatcgacatcccaactagattggcaccctgagagacctccatcctatgccgccaaactc 907737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 3833446 - 3833495
Alignment:
Q  186 caccgacatcccaactaggatggcaccccggggaacctccatcctatgcc 235  Q
    ||||||||||||||||||| |||||||||||| | ||||| |||||||||    
T  3833446 caccgacatcccaactaggttggcaccccgggaagcctccgtcctatgcc 3833495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 34517756 - 34517679
Alignment:
Q  167 gacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||| |||||||| ||| || |||||||||||  ||| ||||| |||| | |||||||||||||||| |||||||||    
T  34517756 gacaagcatcaagaagaaacatcgacatcccaataaggttggcatcccgagaaacctccatcctatgctgccaaactc 34517679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 254
Target Start/End: Complemental strand, 24230271 - 24230171
Alignment:
Q  154 aaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttat 253  Q
    |||| ||||||||||||  |||||||  ||| || |||||||||||||||| || |||||||  |||   |||||||||||| ||||| |||| ||||||    
T  24230271 aaccaggagagaggacaggcatcaaggagaagcaacgacatcccaactaggttgacaccccgatgaattcccatcctatgcctccaaattcaaattttat 24230172  T
Q  254 t 254  Q
    |    
T  24230171 t 24230171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 2583072 - 2583159
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  |||||||||| | || |||||||||||||| | ||||||| |  |  |||||| || |||||||||||||||||    
T  2583072 ggagagaggacagacatcaagaggcatcatcgacatcccaactaagttggcacctcaagagacctccgtcgtatgccgccaaactcaa 2583159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 21813218 - 21813163
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||||| |||||||||| |  |||||||||||||||| ||| ||||    
T  21813218 cgacatcccaactaggttggcaccccgagacacctccatcctatgccaccacactc 21813163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 9266081 - 9266154
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||| |||| || ||||| || |||||||  | || ||||  |||||||||||||||||||||||||||||    
T  9266081 catcaaggggaagcaacgacacccaaactaggtagacaacccgaagaacctccatcctatgccgccaaactcaa 9266154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 11779318 - 11779403
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  |||||||||| | || ||  ||||||| |||| |||||||||| | || ||||||||| ||||| |||||||    
T  11779318 ggagagaggacagacatcaagaggcaacatcggtatcccaattaggttggcaccccgagtaaactccatcctctgccgtcaaactc 11779403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 15318104 - 15318160
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||||||  |||||||| |  ||||| |||||||||||||||||||||||    
T  15318104 cgacatcccaactagattggcaccc-gcagaacccccatcctatgccgccaaactcaa 15318160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 16280516 - 16280431
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||| ||||||| || | || ||||||||||| |||  |||||||||| |  |||||||||||||||| ||| ||||    
T  16280516 ggagagtggacaaacatcaagcggcatcatcgacatcccaattagattggcaccccgagacacctccatcctatgccaccacactc 16280431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 20149914 - 20149951
Alignment:
Q  351 attaaggaaatttgtagtttggaagaccacatctatcc 388  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  20149914 attagggaaatctgtagtttggaagaccacatctatcc 20149951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 23487536 - 23487455
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaa 240  Q
    ||||||||||||  ||||| |||| | || |||||| ||||||||  ||| |||||| |  |||||||||||||||||||||    
T  23487536 ggagagaggacaggcatcaggaggcatcatcgacattccaactagattggtaccccgagatacctccatcctatgccgccaa 23487455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 31893172 - 31893123
Alignment:
Q  186 caccgacatcccaactaggatggcaccccggggaacctccatcctatgcc 235  Q
    ||||||||||||||||||| ||||| |||| | | |||||||||||||||    
T  31893172 caccgacatcccaactaggttggcatcccgagaagcctccatcctatgcc 31893123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 26505967 - 26505887
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgcca 239  Q
    ||||||||||||  |||||||||||| ||| ||||  ||| ||||| ||||||||||   || ||||||| ||||||||||    
T  26505967 ggagagaggacatgcatcaagaggaaacactgacaaaccagctaggttggcaccccgaaaaatctccatcgtatgccgcca 26505887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 28522937 - 28522842
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttatt 254  Q
    ||||||||||||  |||||||||||| ||  ||||||||||||||| ||||||||  | ||||||||||||||||||||||| ||||| |||||||    
T  28522937 ggagagaggacagacatcaagaggaaacattgacatcccaactaggttggcaccctagagaacctccatcctatgccgccaatctcaaattttatt 28522842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 40926468 - 40926538
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaact 243  Q
    ||||| |||||| || |||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  40926468 catcaggaggaaacatcgacatcccaactaggttggcaccccgggaaacctccatcctatgccgccaaact 40926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 1490725 - 1490652
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||| ||| ||||||||||||||||| || |||||||| |||||||||||||| |||||||| |||||    
T  1490725 catcaagagggacctccgacatcccaactaggttgtcaccccggagaacctccatcctacgccgccaagctcaa 1490652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 17151366 - 17151295
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||| |||||| ||| ||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  17151366 catcaggaggaaacactgacatgccaactaggttggcactccgggaaacctccatcctatgccgccaaactc 17151295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 20477510 - 20477425
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||| ||||||  |||||||||| | || |||||||||||||||| |||||||||| |  ||||||||||||||||| |||||||    
T  20477510 ggagaaaggacagacatcaagaggcatcatcgacatcccaactaggttggcaccccgagatacctccatcctatgccgtcaaactc 20477425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 28522750 - 28522698
Alignment:
Q  344 accacagattaaggaaatttgtagtttggaagaccacatctatcccgaaagaa 396  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  28522750 accacagattagggaaatctgtagtttggaagaccacatatatcccgaaagaa 28522698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 36802288 - 36802343
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||| |||||||| |||||||||| | ||||||||||||||||||||||||||    
T  36802288 cgacatctcaactaggttggcaccccgagaaacctccatcctatgccgccaaactc 36802343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 17679707 - 17679792
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||| ||||||| || | || |||||||||||||||| |||||||||| |  |||||||||||||||| ||| ||||    
T  17679707 ggagagtggacaaacatcaagcggcatcatcgacatcccaactaggttggcaccccgagacacctccatcctatgccaccacactc 17679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 20374107 - 20374196
Alignment:
Q  156 ccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    ||||||||  |||||  ||||||| |||| || |||||||||||||||| || |||||||  ||||| ||||||||||| ||||||||||    
T  20374107 ccgggagattggacagacatcaaggggaagcaacgacatcccaactaggttgccaccccgcagaacccccatcctatgctgccaaactca 20374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 22169959 - 22170044
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  |||||||||| | || | ||||||||| |||| ||||| |||| |  |||||||||||||||||||||||||    
T  22169959 ggagagaggacaggcatcaagaggcatcatcaacatcccaattaggttggcatcccgagagacctccatcctatgccgccaaactc 22170044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 13619101 - 13619165
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgc 237  Q
    |||||||||||| |||  |||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  13619101 catcaagaggaaacactaacatcccaactaggttggcaactcggagaacctccatcctatgccgc 13619165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 38242129 - 38242213
Alignment:
Q  160 gagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||| |||||| ||||||| || | || |||||||||||||||| |||||||||| |  |||| ||||||||||||||| ||||    
T  38242129 gagagtggacaagcatcaagcggtatcatcgacatcccaactaggttggcaccccgagacaccttcatcctatgccgccacactc 38242213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 413
Target Start/End: Complemental strand, 25653040 - 25652970
Alignment:
Q  343 taccacagattaaggaaatttgtagtttggaagaccacatctatcccgaaagaagtccgagcctaattcag 413  Q
    ||||| ||| ||||||||| | ||||||||||||||||||||||| |||||||| || |||| ||| ||||    
T  25653040 taccatagactaaggaaatctttagtttggaagaccacatctatctcgaaagaaatcagagcgtaagtcag 25652970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 38376857 - 38376943
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    |||||| |||||  |||||||||| | || |||||||| ||||||| ||||||| || |   |||||||||||||||||||||||||    
T  38376857 ggagagtggacatgcatcaagaggtatcatcgacatcctaactaggttggcacctcgagaggcctccatcctatgccgccaaactca 38376943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 6083802 - 6083733
Alignment:
Q  177 aagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||| |||||||||||| |||||| ||||| | |||  |||||||||| ||||||| |||||||||    
T  6083802 aagaggaaacaccgacatcccgactaggttggcatctcggaaaacctccatcatatgccgtcaaactcaa 6083733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 12102894 - 12102809
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||  |||||||||| | || |||||||||||||| | ||| | |||| | || || ||||||||||||||||||||    
T  12102894 ggagagaggacatacatcaagaggcaacatcgacatcccaactatgttggtatcccgagaaatcttcatcctatgccgccaaactc 12102809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 17377499 - 17377584
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||  |||||||||| | || ||| ||| |||||||| |||||||||  | ||||||||||||||| ||||||||||    
T  17377499 ggagagtggacatgcatcaagaggcaacaacgatatctcaactaggttggcaccccaagaaacctccatcctatgacgccaaactc 17377584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 28698076 - 28698031
Alignment:
Q  351 attaaggaaatttgtagtttggaagaccacatctatcccgaaagaa 396  Q
    ||||||||||||||||||| || | |||||||||||||||||||||    
T  28698076 attaaggaaatttgtagttaggtaaaccacatctatcccgaaagaa 28698031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 34454975 - 34454890
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||| |  |||||||||  | || ||||||||||| |||| |||||||||| |  | |||||||||||||||||||||||    
T  34454975 ggagagaggagaggcatcaagagacatcatcgacatcccaattaggttggcaccccgagacatctccatcctatgccgccaaactc 34454890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 20434205 - 20434261
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    ||||||| |||||||| ||||||||||   |||| ||||||||||||||||||||||    
T  20434205 cgacatcacaactaggttggcaccccgcaaaacccccatcctatgccgccaaactca 20434261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 17678296 - 17678367
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||| | || ||||||||||| |||| ||||||| || |  |||||||||||||||||||| ||||    
T  17678296 catcaagaggcatcatcgacatcccaattaggttggcacctcgagagacctccatcctatgccgccacactc 17678367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 24524099 - 24524154
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||||| |||||||||| |  | |||||||||||||||||| ||||    
T  24524099 cgacatcccaactaggttggcaccccgagacatctccatcctatgccgccagactc 24524154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 26916683 - 26916628
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||||| |||||||||| |  | |||||||||||||||||| ||||    
T  26916683 cgacatcccaactaggttggcaccccgagacatctccatcctatgccgccagactc 26916628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 27206407 - 27206462
Alignment:
Q  191 acatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||||| ||||||||||  ||||| ||||||||||||| ||| |||||    
T  27206407 acatcccaactaggttggcaccccgcagaacccccatcctatgccgtcaatctcaa 27206462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 28948929 - 28948870
Alignment:
Q  186 caccgacatcccaactaggatggcaccccggggaacctccatcctatgcc-gccaaactc 244  Q
    ||||||||||||||||| | |||||||||||| ||||||| |||| |||| |||||||||    
T  28948929 caccgacatcccaactatgttggcaccccgggaaacctccgtcctctgcctgccaaactc 28948870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 29216688 - 29216601
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  |||||||||| | || ||||||||||| || | |||||||  | |  ||||||||||||| |||||||||||||    
T  29216688 ggagagaggacatgcatcaagaggcatcatcgacatcccaattaagttggcacctagagagacctccatcctataccgccaaactcaa 29216601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 246
Target Start/End: Complemental strand, 29329987 - 29329900
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||||||  |||||||||| | || ||||||||||| || | |||||||  | |  ||||||||||||| |||||||||||||    
T  29329987 ggagagaggacatgcatcaagaggcatcatcgacatcccaattaagttggcacctagagagacctccatcctataccgccaaactcaa 29329900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 24270841 - 24270895
Alignment:
Q  190 gacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||||| ||||||  |||| |||||||||||||||| | |||||||    
T  24270841 gacatcccaactaggttggcactgcgggaaacctccatcctatgctgtcaaactc 24270895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 24297395 - 24297342
Alignment:
Q  190 gacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaact 243  Q
    ||||||||||||||| ||||||  |||| |||||||||||||||| | ||||||    
T  24297395 gacatcccaactaggttggcactgcgggaaacctccatcctatgctgtcaaact 24297342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 32234446 - 32234495
Alignment:
Q  186 caccgacatcccaactaggatggcaccccggggaacctccatcctatgcc 235  Q
    ||||||||||||||||||| ||||||| |||| | ||||| |||||||||    
T  32234446 caccgacatcccaactaggttggcacctcgggaagcctccgtcctatgcc 32234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 3914233 - 3914333
Alignment:
Q  154 aaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttat 253  Q
    ||||| |||||||| ||  |||||||  ||| || |||||||||||||||| ||||||||||  ||||   |||||||| ||| ||| ||||| ||||||    
T  3914233 aaccgagagagagggcagacatcaaggagaagcaacgacatcccaactaggttggcaccccgatgaactctcatcctataccgtcaatctcaaattttat 3914332  T
Q  254 t 254  Q
    |    
T  3914333 t 3914333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 2959 - 3064
Alignment:
Q  149 ggatgaaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatt 248  Q
    |||| ||||||||| | |||||  |||||||||||| |||||||||||| | |||| ||||| ||||||||||||||||||||| || ||| |||||| |    
T  2959 ggataaaccgggagcgtggacatgcatcaagaggaaacaccgacatcccgattaggttggcatcccggggaacctccatcctataccaccacactcaaat 3058  T
Q  249 tttatt 254  Q
    ||||||    
T  3059 tttatt 3064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 34657920 - 34658001
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttatt 254  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||| |  ||| |||||| |||||||    
T  34657920 catcaagaggaaacaccgacatcccaactaggttggcaccccggggaacctctatcctatacaaccacactcaaattttatt 34658001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 37005894 - 37005967
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctat 232  Q
    ||||||||||||  |||||||||||| |||||||||||||| |||| ||||||||||| ||||||| |||||||    
T  37005894 ggagagaggacatgcatcaagaggaagcaccgacatcccaattaggttggcaccccggagaacctctatcctat 37005967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 11415968 - 11416053
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||| | |||||||| ||  |||| |||| |||||| |||||||||    
T  11415968 ggagagaggacaaacatcaaaaggaaacaccgacatcccaactaagttggcaccctggaaaacccccattctatgctgccaaactc 11416053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 39406824 - 39406895
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||| | || |||| | ||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  39406824 catcaagaggcaacatcgacttaccaactaggttggcaccccgagaaacctccatcctatgccgccaaactc 39406895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 44673682 - 44673753
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||| | || |||||||||||||||| ||||||||||   || |||||||||||||||||||||||    
T  44673682 catcaagaggcaacatcgacatcccaactaggttggcaccccgcaaaatctccatcctatgccgccaaactc 44673753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 8667091 - 8667175
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||  |||||||||| | || |||||||| ||||||| ||| |||||| | ||||||||||||||||||||||||||    
T  8667091 ggagagtggacaggcatcaagaggcaacatcgacatcctaactaggttgg-accccgagaaacctccatcctatgccgccaaactc 8667175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 19298816 - 19298877
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggca-ccccggggaacctccatcctatg 233  Q
    |||||||||||| ||| |||||| |||||||| ||||| |||||||||||||||||||||||    
T  19298816 catcaagaggaaacactgacatctcaactaggttggcacccccggggaacctccatcctatg 19298877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 11485220 - 11485276
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    |||||||||||||||| |||||||||| |   |||||||||||||||||||||||||    
T  11485220 cgacatcccaactaggttggcaccccgagaggcctccatcctatgccgccaaactca 11485276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 23795541 - 23795462
Alignment:
Q  165 aggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||| ||||| ||| ||  |||||||||||||||||| ||||| || | | |||||||||||||||||| |||||||    
T  23795541 aggacaaacatcaggagaaaataccgacatcccaactaggttggcatcctgtgaaacctccatcctatgccgtcaaactc 23795462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 25219724 - 25219653
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||| |||||| ||||||||| ||||||||| ||||||| |||| ||| |||  |||||||||||||||||    
T  25219724 catcaggaggaaacaccgacattccaactaggttggcacctcgggaaacttccgccctatgccgccaaactc 25219653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 33040597 - 33040652
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||||| |||||||||| | |||||||||| ||||||| |||||||    
T  33040597 cgacatcccaactaggttggcaccccgagaaacctccatcatatgccgtcaaactc 33040652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 34512150 - 34512060
Alignment:
Q  154 aaccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||| |||||| |||||  |||||||||| | || |||||||||||||||| ||||||||||||  |||| ||| ||| || |||||||||    
T  34512150 aaccaggagagtggacaggcatcaagaggcatcatcgacatcccaactaggttggcaccccgggagaccttcattctacgctgccaaactc 34512060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 1924647 - 1924732
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| ||| || |||||||| | | || |||||||||||||||| |||||||||| |  |||||||||||||||| ||| ||||    
T  1924647 ggagagtggaaaaacatcaagatgtatcatcgacatcccaactaggttggcaccccgagacacctccatcctatgccaccacactc 1924732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 3007482 - 3007527
Alignment:
Q  354 aaggaaatttgtagtttggaagaccacatctatcccgaaagaagtc 399  Q
    |||||||| ||||||||||||| ||||||||||||| |||||||||    
T  3007482 aaggaaatctgtagtttggaagtccacatctatccctaaagaagtc 3007527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 4936096 - 4936023
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||| || |||||||||||||| | |||||||||| | ||||| |||| ||  |||||||||||||    
T  4936096 catcaagaggaaacatcgacatcccaactaagttggcaccccgcgaaaccttcatcatacaccgccaaactcaa 4936023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 18234297 - 18234240
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||| ||||||||| |||||||||| |  |||||||||||||||||||||| ||||    
T  18234297 cgacattccaactaggttggcaccccgagatacctccatcctatgccgccaaattcaa 18234240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 347 - 396
Target Start/End: Original strand, 39407012 - 39407061
Alignment:
Q  347 acagattaaggaaatttgtagtttggaagaccacatctatcccgaaagaa 396  Q
    ||||||||||||||| ||||||| || | |||||||||||||||||||||    
T  39407012 acagattaaggaaatatgtagttaggtaaaccacatctatcccgaaagaa 39407061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 6192640 - 6192585
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||||| ||||||| || |  ||||||||| |||||||||||||||    
T  6192640 cgacatcccaactaggttggcacctcgagatacctccatcttatgccgccaaactc 6192585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 18487515 - 18487445
Alignment:
Q  175 tcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||| || |||||||| || |||| |||||||||| | ||| || |||||||||||||||||||||    
T  18487515 tcaagaggaaacaacgacatcc-aattaggttggcaccccgcgaaacatctatcctatgccgccaaactcaa 18487445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 396
Target Start/End: Original strand, 20380427 - 20380465
Alignment:
Q  358 aaatttgtagtttggaagaccacatctatcccgaaagaa 396  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  20380427 aaatttgtagttaggaagtccacatctatcccgaaagaa 20380465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 3007276 - 3007361
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||| ||||||  || | || || ||||||||||||| ||| |||||| |  |||||||||||||||||||| ||||    
T  3007276 ggagagtggacaaacatcaaacggtatcatcgtcatcccaactaggttggtaccccgagacacctccatcctatgccgccacactc 3007361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 15159483 - 15159402
Alignment:
Q  165 aggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||  ||||| ||||| || |||||||||||||| | || ||| ||| | |||||||| |||||||||||||| ||||    
T  15159483 aggacaaatatcaaaaggaaacaacgacatcccaactaagttgacactccgcgaaacctccaacctatgccgccaaaatcaa 15159402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 41068928 - 41068856
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgcc-gccaaactc 244  Q
    ||||| |||| | |||||||||||||||| || ||||| |||||| | ||||| ||||||||| |||||||||    
T  41068928 catcatgaggcaacaccgacatcccaactgggttggcatcccgggaagcctccgtcctatgcctgccaaactc 41068856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0911 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0911
Description:

Target: scaffold0911; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 2226 - 2297
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| ||||| ||||||| | ||||||||  |||||||||||| ||||||||||||||||||||||||||    
T  2226 catcaaaaggaaacaccgacgttccaactagattggcaccccgggaaacctccatcctatgccgccaaactc 2297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1667 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1667
Description:

Target: scaffold1667; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 710 - 783
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||| || || ||||||||| |||||| ||||||| ||  |||||||||||||||||||||||||||||    
T  710 catcaagagaaagcaacgacatcccgactaggttggcacctcgaagaacctccatcctatgccgccaaactcaa 783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 2853 - 2780
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||| | || |||||||||||||||| ||| ||| || | ||||||||||||||||||||||||||||    
T  2853 catcaagaggcaacatcgacatcccaactaggttggtacctcgagaaacctccatcctatgccgccaaactcaa 2780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 8005 - 8086
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaatttttatt 254  Q
    ||||||||||||  |||||||||||||||||  ||||| |||||| ||||||| || ||||| ||||||||||| |||||||    
T  8005 catcaagaggaaataccgacatcccaactagattggcatcccgggaaacctccctcatatgcagccaaactcaaattttatt 8086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 8181 - 8225
Alignment:
Q  343 taccacagattaaggaaatttgtagtttggaagaccacatctatc 387  Q
    ||||||||| || |||||| ||||||| |||||||||||||||||    
T  8181 taccacagactatggaaatctgtagttaggaagaccacatctatc 8225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 20929 - 20856
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||||| || || ||||||||| |||||| ||||||| ||  |||||||||||||||||||||||||||||    
T  20929 catcaagagaaagcaacgacatcccgactaggttggcacctcgaagaacctccatcctatgccgccaaactcaa 20856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 302 - 385
Alignment:
Q  161 agagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    ||||||||||  |||||||||| | || |||| | ||||||||  |||||||||| | ||||||||||||||||||||||||||    
T  302 agagaggacatgcatcaagaggcaacatcgacttaccaactagtttggcaccccgagaaacctccatcctatgccgccaaactc 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 103777 - 103706
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||| | || |||||||||||||||| |||||||||| | || ||||||||||||||| |||||||    
T  103777 catcaagaggcaacatcgacatcccaactaggttggcaccccgagaaatctccatcctatgccgtcaaactc 103706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 55769 - 55854
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||  ||||||| || | || |||||||||||||||| ||||||||||    |||||||||||||||| ||| ||||    
T  55769 ggagagtggacagacatcaagcggcatcatcgacatcccaactaggttggcaccccgacacacctccatcctatgccaccacactc 55854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 52774 - 52710
Alignment:
Q  179 gaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaact 243  Q
    |||||| |||||| |||||||||||| |||||||  ||| ||||||| |||||| || |||||||    
T  52774 gaggaaacaccgaaatcccaactaggttggcaccttgggaaacctccgtcctataccaccaaact 52710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 41225 - 41314
Alignment:
Q  156 ccgggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    ||||||||  |||||  ||||||| |||| || ||| |||||||||||| ||||||||||  |||||  |||||||||||||||||||||    
T  41225 ccgggagattggacatgcatcaaggggaagcaacgaaatcccaactaggttggcaccccgcagaaccctcatcctatgccgccaaactca 41314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 21881 - 21947
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgcca 239  Q
    |||||||||| | || |||||||||||||||| ||||| |||| |  ||||||||||||||||||||    
T  21881 catcaagaggcatcatcgacatcccaactaggttggcatcccgagagacctccatcctatgccgcca 21947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 16109 - 16024
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||| ||||||| || | || |||||||||||||||| |||||| ||| |  |||||||| ||||||||||| ||||    
T  16109 ggagagtggacaaacatcaagcggcatcatcgacatcccaactaggttggcactccgagacacctccatgctatgccgccacactc 16024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 129506 - 129421
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| ||| || |||||||||  | || |||||||||||||||| |||||||||| |  |||||||||||||||| ||| ||||    
T  129506 ggagagtggaaaaacatcaagagtcatcatcgacatcccaactaggttggcaccccgagacacctccatcctatgccaccacactc 129421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 129303 - 129258
Alignment:
Q  354 aaggaaatttgtagtttggaagaccacatctatcccgaaagaagtc 399  Q
    |||||||| ||||||| ||||||||||||||||| | |||||||||    
T  129303 aaggaaatctgtagttcggaagaccacatctatctctaaagaagtc 129258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 36665 - 36750
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||| |||  |||||||||| | || |||||||||||||||| ||| ||| || | |||||||| | |||||||||||||||    
T  36665 ggagagagtacatacatcaagaggcaacatcgacatcccaactaggttggtacctcgagaaacctccaacttatgccgccaaactc 36750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 307323 - 307238
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| ||| || |||||||||  | || |||||||||||||||| |||||||||| |  |||||||||||||||| ||| ||||    
T  307323 ggagagtggaaaaacatcaagagtcatcatcgacatcccaactaggttggcaccccgagacacctccatcctatgccaccacactc 307238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 399
Target Start/End: Complemental strand, 307120 - 307075
Alignment:
Q  354 aaggaaatttgtagtttggaagaccacatctatcccgaaagaagtc 399  Q
    |||||||| ||||||| ||||||||||||||||| | |||||||||    
T  307120 aaggaaatctgtagttcggaagaccacatctatctctaaagaagtc 307075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 26535 - 26452
Alignment:
Q  160 gagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||  |||| ||||||| |||| ||||||||  |||| ||||| |||||| |||||||||||||| ||| |||||||    
T  26535 gagagaggacatgcatcgagaggaaacaccaacatcccat-taggttggcatcccgggaaacctccatcctataccgtcaaactc 26452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 13781 - 13734
Alignment:
Q  188 ccgacatcccaactaggatggcaccccggggaacctccatcctatgcc 235  Q
    ||||||||||||||||| |||||||||||| ||| ||| |||||||||    
T  13781 ccgacatcccaactaggttggcaccccgggaaacttccgtcctatgcc 13734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 19591 - 19646
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||||| |||||||||| |  |||||||||||||||| ||| ||||    
T  19591 cgacatcccaactaggttggcaccccgagacacctccatcctatgccaccacactc 19646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 2536 - 2481
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||||||||||| |||||||||| |  | |||||||||||||||||| ||||    
T  2536 cgacatcccaactaggttggcaccccgagacatctccatcctatgccgccagactc 2481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 80388 - 80333
Alignment:
Q  191 acatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||||| |||||||||| | || |||||||||||||||| | ||||||    
T  80388 acatcccaactaggttggcaccccgcgaaatctccatcctatgccgctacactcaa 80333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 4510 - 4444
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgcca 239  Q
    |||||||||| | ||  ||||||||||||||| ||||||| || |  ||||||||||||||||||||    
T  4510 catcaagaggtatcattgacatcccaactaggttggcacctcgagagacctccatcctatgccgcca 4444  T

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Target: scaffold0196 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 835 - 793
Alignment:
Q  173 catcaagaggaaccaccgacatcccaactaggatggcaccccg 215  Q
    |||||||||| | ||||||||||||||||||| ||||||||||    
T  835 catcaagaggcaacaccgacatcccaactaggttggcaccccg 793  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 3417 - 3471
Alignment:
Q  191 acatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    |||||||||||||| |||||| |||  ||||| ||||||||||||||||| ||||    
T  3417 acatcccaactaggttggcactccgcagaacccccatcctatgccgccaatctca 3471  T

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Target: scaffold0363 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 5289 - 5374
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||| |||||| ||||||| || | || |||||||||||||||| ||||||| || |  ||||||||||| ||| |||| ||||    
T  5289 ggagagtggacaaacatcaagcggcatcatcgacatcccaactaggttggcacctcgagacacctccatcctctgctgccacactc 5374  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 6485 - 6404
Alignment:
Q  165 aggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    ||||||| ||||||||||||  | ||||||  ||| |||| ||||||||||   |||||||||| ||||||||||| |||||    
T  6485 aggacaagcatcaagaggaagaaacgacatttcaattaggttggcaccccgattaacctccatcttatgccgccaatctcaa 6404  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 396
Target Start/End: Original strand, 2299 - 2348
Alignment:
Q  347 acagattaaggaaatttgtagtttggaagaccacatctatcccgaaagaa 396  Q
    ||||||||||||||| |||||||  | | |||||||||||||||||||||    
T  2299 acagattaaggaaatctgtagttaagtaaaccacatctatcccgaaagaa 2348  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 101033 - 100977
Alignment:
Q  187 accgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactc 244  Q
    |||||||| ||||| ||| |||||||| ||| ||||||| ||||||||||||||||||    
T  101033 accgacattccaaccaggttggcaccc-gggaaacctccgtcctatgccgccaaactc 100977  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 173923 - 173866
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactcaa 246  Q
    |||||||||||||||| |||||||||| |  ||||||||| ||||| ||||| |||||    
T  173923 cgacatcccaactaggttggcaccccgagatacctccatcttatgctgccaatctcaa 173866  T

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Target: scaffold0292 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 21305 - 21249
Alignment:
Q  159 ggagagaggacaaccatcaagaggaaccaccgacatcccaactaggatggcaccccg 215  Q
    |||||| |||||  |||||||||| | || |||||||||||||||| ||||||||||    
T  21305 ggagagtggacaggcatcaagaggcatcatcgacatcccaactaggttggcaccccg 21249  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 160361 - 160305
Alignment:
Q  189 cgacatcccaactaggatggcaccccggggaacctccatcctatgccgccaaactca 245  Q
    |||||||||||||||| || |||||||  ||||| |||| |||||||||||| ||||    
T  160361 cgacatcccaactaggttgccaccccgcagaacccccattctatgccgccaatctca 160305  T

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