View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13636_low_16 (Length: 270)

Name: NF13636_low_16
Description: NF13636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13636_low_16
NF13636_low_16
[»] chr5 (42 HSPs)
chr5 (13-255)||(16610497-16610740)
chr5 (48-151)||(31706387-31706490)
chr5 (61-150)||(704490-704579)
chr5 (54-131)||(29651767-29651844)
chr5 (68-151)||(29994652-29994735)
chr5 (149-227)||(31659582-31659660)
chr5 (61-126)||(27482646-27482711)
chr5 (149-227)||(19929638-19929717)
chr5 (154-235)||(833991-834070)
chr5 (153-227)||(9524091-9524165)
chr5 (149-227)||(14000663-14000741)
chr5 (157-227)||(19930465-19930535)
chr5 (178-228)||(36700974-36701024)
chr5 (149-207)||(39956005-39956063)
chr5 (86-139)||(21041995-21042048)
chr5 (169-221)||(11131728-11131780)
chr5 (83-151)||(26778716-26778784)
chr5 (149-225)||(28766484-28766560)
chr5 (149-201)||(33168470-33168522)
chr5 (149-235)||(41613236-41613319)
chr5 (150-233)||(936320-936403)
chr5 (149-211)||(6062191-6062253)
chr5 (149-227)||(7463915-7463993)
chr5 (182-224)||(19128355-19128397)
chr5 (82-128)||(32252176-32252222)
chr5 (178-227)||(3295830-3295878)
chr5 (149-222)||(24836945-24837018)
chr5 (154-227)||(33629557-33629630)
chr5 (149-209)||(23270848-23270908)
chr5 (71-127)||(25942600-25942656)
chr5 (83-151)||(39839938-39840006)
chr5 (178-225)||(8990577-8990624)
chr5 (69-152)||(25326156-25326239)
chr5 (178-229)||(43370402-43370453)
chr5 (171-205)||(8942628-8942662)
chr5 (62-151)||(19314979-19315068)
chr5 (83-152)||(27843500-27843569)
chr5 (178-227)||(32870139-32870188)
chr5 (178-235)||(38445361-38445418)
chr5 (71-151)||(804383-804463)
chr5 (192-235)||(9051268-9051312)
chr5 (71-127)||(16518372-16518428)
[»] chr2 (35 HSPs)
chr2 (13-147)||(8090506-8090640)
chr2 (49-139)||(40638766-40638856)
chr2 (68-151)||(31640273-31640356)
chr2 (49-151)||(20948142-20948244)
chr2 (56-129)||(9420722-9420795)
chr2 (83-152)||(27009231-27009300)
chr2 (150-227)||(34753399-34753476)
chr2 (67-151)||(45131107-45131191)
chr2 (149-228)||(11653153-11653232)
chr2 (178-227)||(24004381-24004430)
chr2 (152-227)||(9169947-9170022)
chr2 (149-227)||(25915017-25915095)
chr2 (169-227)||(36802602-36802660)
chr2 (154-227)||(13450352-13450425)
chr2 (149-228)||(15265766-15265845)
chr2 (152-227)||(35916904-35916979)
chr2 (149-227)||(9191964-9192042)
chr2 (178-228)||(33133801-33133851)
chr2 (149-227)||(41014472-41014550)
chr2 (178-227)||(15508791-15508840)
chr2 (153-218)||(21564248-21564313)
chr2 (154-227)||(21885130-21885203)
chr2 (62-126)||(30505774-30505838)
chr2 (149-213)||(41633373-41633437)
chr2 (178-229)||(20111235-20111286)
chr2 (67-126)||(38409046-38409105)
chr2 (154-228)||(33134330-33134404)
chr2 (62-128)||(37738061-37738127)
chr2 (149-227)||(38147818-38147896)
chr2 (155-228)||(4160322-4160395)
chr2 (154-207)||(12617061-12617114)
chr2 (150-227)||(41384300-41384376)
chr2 (66-114)||(9933071-9933119)
chr2 (80-152)||(33645830-33645902)
chr2 (149-197)||(42057161-42057209)
[»] chr7 (41 HSPs)
chr7 (13-151)||(47543460-47543598)
chr7 (157-225)||(8036369-8036437)
chr7 (149-229)||(15566576-15566656)
chr7 (149-227)||(5800443-5800521)
chr7 (152-225)||(1787153-1787226)
chr7 (58-129)||(10315127-10315198)
chr7 (178-229)||(19492097-19492148)
chr7 (83-127)||(9628257-9628301)
chr7 (96-151)||(4609652-4609707)
chr7 (58-129)||(31030341-31030412)
chr7 (178-236)||(3996589-3996647)
chr7 (149-227)||(35367470-35367547)
chr7 (149-227)||(48621961-48622039)
chr7 (178-227)||(34729408-34729457)
chr7 (152-220)||(15646937-15647005)
chr7 (83-151)||(17116400-17116468)
chr7 (150-229)||(10040600-10040679)
chr7 (149-224)||(19371922-19371997)
chr7 (68-151)||(26569741-26569824)
chr7 (149-227)||(27513150-27513228)
chr7 (153-227)||(36609636-36609710)
chr7 (149-215)||(40356203-40356269)
chr7 (152-225)||(7809905-7809978)
chr7 (178-235)||(38174889-38174946)
chr7 (150-202)||(4550508-4550560)
chr7 (149-197)||(21766029-21766077)
chr7 (153-209)||(39435170-39435226)
chr7 (154-225)||(581572-581643)
chr7 (181-228)||(7774799-7774846)
chr7 (155-226)||(16682977-16683048)
chr7 (155-226)||(17657213-17657284)
chr7 (157-227)||(21080021-21080091)
chr7 (177-227)||(31177038-31177088)
chr7 (67-125)||(34237214-34237272)
chr7 (149-227)||(42963099-42963176)
chr7 (153-218)||(20055834-20055899)
chr7 (184-229)||(27240805-27240850)
chr7 (190-227)||(40658822-40658859)
chr7 (149-193)||(12170723-12170767)
chr7 (149-185)||(15470294-15470330)
chr7 (149-197)||(46759432-46759480)
[»] chr6 (27 HSPs)
chr6 (13-150)||(32196744-32196881)
chr6 (54-151)||(7824105-7824202)
chr6 (68-151)||(11324501-11324584)
chr6 (67-150)||(5667346-5667429)
chr6 (67-127)||(18673422-18673482)
chr6 (152-228)||(19145961-19146037)
chr6 (67-130)||(16853062-16853125)
chr6 (153-228)||(24062809-24062884)
chr6 (176-220)||(17943770-17943814)
chr6 (67-130)||(9907213-9907276)
chr6 (83-130)||(34714970-34715017)
chr6 (153-227)||(12169672-12169746)
chr6 (89-151)||(32533067-32533129)
chr6 (152-213)||(22793080-22793141)
chr6 (154-227)||(32349183-32349256)
chr6 (87-135)||(17292767-17292815)
chr6 (150-221)||(21236861-21236932)
chr6 (157-228)||(26854168-26854239)
chr6 (152-227)||(33573663-33573738)
chr6 (80-130)||(22469477-22469527)
chr6 (88-130)||(29599170-29599212)
chr6 (48-151)||(9200880-9200976)
chr6 (86-151)||(11298592-11298657)
chr6 (171-227)||(7451525-7451581)
chr6 (152-200)||(20469691-20469739)
chr6 (149-225)||(28592858-28592934)
chr6 (149-197)||(32531312-32531360)
[»] chr1 (43 HSPs)
chr1 (13-151)||(32160103-32160240)
chr1 (49-151)||(15259434-15259536)
chr1 (67-151)||(26260785-26260869)
chr1 (56-151)||(27363725-27363820)
chr1 (88-151)||(27568417-27568480)
chr1 (149-228)||(37705631-37705710)
chr1 (149-227)||(11842773-11842850)
chr1 (149-227)||(33194088-33194166)
chr1 (153-227)||(47402437-47402511)
chr1 (74-151)||(44675129-44675206)
chr1 (71-127)||(17128543-17128599)
chr1 (62-126)||(36098596-36098660)
chr1 (152-227)||(45478830-45478905)
chr1 (93-151)||(9484879-9484937)
chr1 (157-227)||(38619431-38619501)
chr1 (86-139)||(48973697-48973750)
chr1 (83-132)||(52626559-52626608)
chr1 (157-227)||(1580999-1581069)
chr1 (56-151)||(27264610-27264711)
chr1 (150-224)||(34011016-34011090)
chr1 (81-151)||(38133034-38133104)
chr1 (83-133)||(40708441-40708491)
chr1 (86-151)||(28442145-28442210)
chr1 (149-202)||(46880213-46880266)
chr1 (151-207)||(4242263-4242319)
chr1 (157-221)||(21336328-21336392)
chr1 (150-226)||(44921719-44921795)
chr1 (149-228)||(10729221-10729300)
chr1 (67-125)||(2653704-2653762)
chr1 (149-203)||(11409177-11409231)
chr1 (169-211)||(16389102-16389144)
chr1 (178-228)||(44648458-44648508)
chr1 (178-227)||(650120-650169)
chr1 (86-151)||(5411773-5411838)
chr1 (152-197)||(5880745-5880790)
chr1 (152-213)||(5965559-5965620)
chr1 (180-225)||(9398187-9398232)
chr1 (178-227)||(31528844-31528893)
chr1 (150-223)||(48420168-48420241)
chr1 (65-105)||(7643082-7643122)
chr1 (155-227)||(8209235-8209307)
chr1 (71-127)||(8527077-8527133)
chr1 (83-151)||(25392319-25392387)
[»] chr3 (54 HSPs)
chr3 (13-151)||(4741033-4741168)
chr3 (49-151)||(13043383-13043485)
chr3 (49-151)||(13051460-13051562)
chr3 (149-227)||(22177561-22177639)
chr3 (152-227)||(54768140-54768215)
chr3 (82-151)||(14788901-14788970)
chr3 (152-228)||(38176949-38177025)
chr3 (67-151)||(47161022-47161106)
chr3 (149-227)||(22102612-22102690)
chr3 (74-151)||(20017410-20017487)
chr3 (74-150)||(6894228-6894304)
chr3 (149-220)||(38277553-38277624)
chr3 (149-228)||(49758212-49758291)
chr3 (86-148)||(12947907-12947969)
chr3 (86-139)||(6925997-6926050)
chr3 (71-127)||(21408114-21408170)
chr3 (152-227)||(18388580-18388655)
chr3 (149-228)||(18461102-18461181)
chr3 (72-151)||(25845682-25845761)
chr3 (149-227)||(5811917-5811995)
chr3 (178-236)||(18386707-18386765)
chr3 (178-227)||(14266015-14266064)
chr3 (86-139)||(53876881-53876934)
chr3 (149-205)||(7639654-7639710)
chr3 (157-228)||(7777766-7777838)
chr3 (154-226)||(21091777-21091849)
chr3 (149-229)||(22258404-22258484)
chr3 (99-147)||(33388586-33388634)
chr3 (157-229)||(45701717-45701789)
chr3 (149-224)||(46931713-46931786)
chr3 (181-224)||(12565299-12565342)
chr3 (153-208)||(13043131-13043186)
chr3 (153-208)||(13051208-13051263)
chr3 (181-224)||(13259698-13259741)
chr3 (150-228)||(265159-265237)
chr3 (149-223)||(2454363-2454437)
chr3 (149-227)||(5907116-5907194)
chr3 (169-227)||(35379579-35379637)
chr3 (169-234)||(5530826-5530891)
chr3 (83-139)||(8074647-8074706)
chr3 (149-227)||(17438550-17438630)
chr3 (149-198)||(19225119-19225168)
chr3 (153-210)||(19245528-19245585)
chr3 (171-228)||(21078857-21078914)
chr3 (86-151)||(22534037-22534102)
chr3 (86-151)||(29542387-29542452)
chr3 (170-227)||(31766460-31766517)
chr3 (86-151)||(41878726-41878791)
chr3 (150-207)||(45648334-45648391)
chr3 (176-224)||(13149844-13149892)
chr3 (153-224)||(22152459-22152531)
chr3 (67-127)||(23050173-23050233)
chr3 (150-206)||(25842533-25842589)
chr3 (182-222)||(49430407-49430447)
[»] chr4 (36 HSPs)
chr4 (149-227)||(21122420-21122498)
chr4 (152-228)||(35519269-35519345)
chr4 (152-227)||(5190629-5190704)
chr4 (68-151)||(52578018-52578101)
chr4 (67-139)||(19846574-19846646)
chr4 (71-130)||(37772967-37773026)
chr4 (150-227)||(7438047-7438124)
chr4 (83-127)||(13608945-13608989)
chr4 (152-235)||(1363924-1364007)
chr4 (150-221)||(20702719-20702790)
chr4 (178-237)||(23775336-23775395)
chr4 (148-213)||(17702658-17702723)
chr4 (178-227)||(44277093-44277142)
chr4 (149-209)||(2548616-2548676)
chr4 (71-127)||(8814058-8814114)
chr4 (89-152)||(9831417-9831480)
chr4 (149-227)||(23091109-23091187)
chr4 (86-151)||(11131187-11131252)
chr4 (67-152)||(13137113-13137198)
chr4 (71-120)||(22495352-22495401)
chr4 (86-139)||(54870818-54870871)
chr4 (149-197)||(161001-161049)
chr4 (149-229)||(5499199-5499279)
chr4 (149-225)||(20817993-20818069)
chr4 (178-225)||(9778982-9779029)
chr4 (157-228)||(17702364-17702435)
chr4 (92-151)||(27270012-27270071)
chr4 (149-228)||(54855891-54855970)
chr4 (178-228)||(9170922-9170972)
chr4 (67-125)||(45637490-45637548)
chr4 (62-151)||(30972364-30972453)
chr4 (150-211)||(49320300-49320361)
chr4 (149-197)||(5720238-5720286)
chr4 (83-127)||(12115053-12115097)
chr4 (83-151)||(22653321-22653389)
chr4 (155-227)||(39670361-39670433)
[»] chr8 (32 HSPs)
chr8 (83-151)||(8462510-8462578)
chr8 (149-229)||(13469358-13469438)
chr8 (178-220)||(27022608-27022650)
chr8 (149-209)||(13150141-13150201)
chr8 (151-227)||(15898963-15899039)
chr8 (67-127)||(38738483-38738543)
chr8 (149-228)||(35451037-35451116)
chr8 (149-227)||(1759441-1759519)
chr8 (149-227)||(15044083-15044160)
chr8 (150-227)||(5918833-5918910)
chr8 (182-227)||(11929402-11929447)
chr8 (169-237)||(11352972-11353040)
chr8 (149-224)||(18994542-18994617)
chr8 (89-151)||(33191206-33191268)
chr8 (149-227)||(41666543-41666621)
chr8 (153-219)||(12838771-12838837)
chr8 (149-227)||(23085624-23085702)
chr8 (153-223)||(27837753-27837823)
chr8 (169-227)||(33192331-33192389)
chr8 (149-227)||(34180246-34180324)
chr8 (155-225)||(38804458-38804528)
chr8 (150-228)||(45440852-45440930)
chr8 (54-151)||(5752015-5752112)
chr8 (149-194)||(7020146-7020191)
chr8 (178-211)||(8889755-8889788)
chr8 (178-227)||(9503206-9503255)
chr8 (153-206)||(11916121-11916174)
chr8 (182-227)||(11941804-11941849)
chr8 (83-152)||(33282848-33282917)
chr8 (174-207)||(43922447-43922480)
chr8 (152-196)||(15916926-15916970)
chr8 (149-205)||(41941081-41941137)
[»] scaffold0014 (2 HSPs)
scaffold0014 (157-240)||(21074-21157)
scaffold0014 (178-227)||(21649-21698)
[»] scaffold0293 (1 HSPs)
scaffold0293 (154-227)||(4682-4755)
[»] scaffold0003 (2 HSPs)
scaffold0003 (178-227)||(227484-227533)
scaffold0003 (152-227)||(226142-226217)
[»] scaffold0268 (1 HSPs)
scaffold0268 (153-228)||(21407-21482)
[»] scaffold0068 (1 HSPs)
scaffold0068 (152-227)||(57415-57490)
[»] scaffold0005 (1 HSPs)
scaffold0005 (149-220)||(254695-254766)
[»] scaffold0707 (1 HSPs)
scaffold0707 (152-227)||(169-244)
[»] scaffold0649 (1 HSPs)
scaffold0649 (152-203)||(8251-8302)
[»] scaffold0196 (1 HSPs)
scaffold0196 (149-228)||(8503-8582)
[»] scaffold0795 (1 HSPs)
scaffold0795 (83-152)||(2191-2260)
[»] scaffold0047 (1 HSPs)
scaffold0047 (74-130)||(64275-64331)
[»] scaffold0002 (1 HSPs)
scaffold0002 (176-224)||(155110-155158)


Alignment Details
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 255
Target Start/End: Complemental strand, 16610740 - 16610497
Alignment:
Q  13 aatatatacaaaagttgcctaacagatcataaacaaaaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatgg 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  16610740 aatatatacaaaagttgcctaacagatcataaacaaaaaacagaaaagaaactattagccaatgcctaaaatggtaaacggactaagccaccacccatga 16610641  T
Q  113 taattgaagggaagagaaacaaacttcgtcttcaaccaccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcc 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16610640 taattgaagggaagagaaacaaacttcgtcttcaaccaccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacggacacgtgagtgcc 16610541  T
Q  213 cgtt-ttttcgctagtttgtataatggaagctaccagataaatt 255  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  16610540 cgtttttttcgctagtttctataatggaagctaccagataaatt 16610497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 31706387 - 31706490
Alignment:
Q  48 aaaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaa 147  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| ||| ||    
T  31706387 aaaaacagaaaagaaactcttagcctatgcccaatatggtaaacggactaagccaccacccatggtaattgaggggaagagaaatatacttcgcctttaa 31706486  T
Q  148 ccac 151  Q
    ||||    
T  31706487 ccac 31706490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 704490 - 704579
Alignment:
Q  61 aaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaacca 150  Q
    ||||| |||||||||||| |  ||||||||||||||||| ||||||||||| |||||||| |||||| || ||||||| | |||||||||    
T  704490 aaacttttagccaatgcccagtatggtaaacggactaagtcaccacccatgataattgaatggaagaaaagcaaactttgccttcaacca 704579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 29651767 - 29651844
Alignment:
Q  54 agaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaa 131  Q
    ||||||||||  ||||||| ||||| || ||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  29651767 agaaaagaaaaccttagcctatgcccaacatggtaaacggactaagccaccacccatgataattgaggagaagagaaa 29651844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 29994735 - 29994652
Alignment:
Q  68 tagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||||||||||  ||||||||| |||||||||| ||||| ||||||||||||||| ||  |||||||  ||||||||||    
T  29994735 tagccaatgcctaaaacagtaaacggattaagccaccaaccatgataattgaagggaagaaaaggaaacttcaccttcaaccac 29994652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 31659582 - 31659660
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||| ||||||  ||||| || |||||||||| |||||||||  |||||||||||||||| |||||||||||    
T  31659582 caccgttcatatttttcaaacgttagcgcaataaaaagaacggaaagacgaacacgtgagtgcccgtcttttcgctagt 31659660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 27482646 - 27482711
Alignment:
Q  61 aaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaag 126  Q
    |||||||||||| ||||| || ||||| ||||||||||||||||| ||||| ||||||||||||||    
T  27482646 aaactcttagcctatgcccaacatggtgaacggactaagccaccagccatgataattgaagggaag 27482711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 19929638 - 19929717
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagt-gcccgttttttcgctagt 227  Q
    ||||||||||||||||||  |||||||  ||||||| |||||||||||| | |||||||||  |||||||||||||||||    
T  19929638 caccgttcataattttcaaacgttaacacaataaaatgagcggaaagacgggcacgtgagtaacccgttttttcgctagt 19929717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 834070 - 833991
Alignment:
Q  154 ttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtataa 235  Q
    |||||||||||||  |||||||| |||||||||||||||||||||| |||    |||||||| ||||||||||| |||||||    
T  834070 ttcataattttcaaacgttaacgcaataaaaagagcggaaagacaggcac--tcgtgcccgtcttttcgctagtatgtataa 833991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 9524091 - 9524165
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||  ||||| || |||||||||||||||||||||| ||||   |||||||| |||||||||||    
T  9524091 gttcataattttcaaacgttagcgcaataaaaagagcggaaagacaggcacgcacgtgcccgtcttttcgctagt 9524165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 14000663 - 14000741
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||  |||||||| ||||||||||||||||||||   |||||||| | |||  |||||||||||    
T  14000663 caccgttcataattttcaaacgttaacgcaataaaaagagcggaaagacgagcacgtgagagtccgccttttcgctagt 14000741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 19930465 - 19930535
Alignment:
Q  157 ataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||  ||||||| ||||||||||||||||||||  |||||||||||| |||| |||| ||||||    
T  19930465 ataattttcaaacgttaacataataaaaagagcggaaagatggacacgtgagtgtccgtctttttgctagt 19930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 36700974 - 36701024
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  36700974 aataaaaagggcggaaagacagacacgtgagtgtccgtcttttcgctagtt 36701024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 39956005 - 39956063
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtga 207  Q
    ||||||||||||||||||   |||| || ||||||||||||||||||||||||||||||    
T  39956005 caccgttcataattttcaaatgttagcgcaataaaaagagcggaaagacagacacgtga 39956063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 21042048 - 21041995
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttc 139  Q
    |||||||||||||||||||||||||| ||||| ||||||||||  |||||||||    
T  21042048 gtaaacggactaagccaccacccatgataattaaagggaagagttacaaacttc 21041995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 11131780 - 11131728
Alignment:
Q  169 cgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttc 221  Q
    ||||||||||||||||||||||||||||||  |||||||||| |||| |||||    
T  11131780 cgttaacgtaataaaaagagcggaaagacaagcacgtgagtgtccgtcttttc 11131728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 26778716 - 26778784
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||||||||||||||| |||||| ||||| |||||||||| |||||||| ||| |||  ||||||||||    
T  26778716 atggtaaacggactaaaccaccaaccatgataattgaaggaaagagaaaaaaatttcaccttcaaccac 26778784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 28766484 - 28766560
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgcta 225  Q
    ||||||||||||||||||   ||||| | |||||||||||||||||||| | ||| ||||||||| | |||||||||    
T  28766484 caccgttcataattttcaaaagttaatgcaataaaaagagcggaaagacgggcacatgagtgcccatcttttcgcta 28766560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 33168470 - 33168522
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagac 201  Q
    ||||||||||||||||||  |||||||| ||||||||||| ||||||||||||    
T  33168470 caccgttcataattttcaaacgttaacgcaataaaaagagtggaaagacagac 33168522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 41613236 - 41613319
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtataa 235  Q
    ||||| ||||||||||||  |||| | || ||||||||||||||||||| | |||||||||||||   ||||||||||||| |||||    
T  41613236 caccgatcataattttcaaacgttgatgtgataaaaagagcggaaagacgggcacgtgagtgccc---ttttcgctagtttatataa 41613319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 936320 - 936403
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtat 233  Q
    |||||||||||||||||  ||||| || |||||||||||||||||||| | ||||||| |  || | ||||||||||| |||||    
T  936320 accgttcataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacgtgaatagccatattttcgctagtatgtat 936403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 6062191 - 6062253
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgc 211  Q
    |||||||||||||||| |  ||||| ||||||||||| ||||||||||||| ||||| |||||    
T  6062191 caccgttcataatttttaaacgttagcgtaataaaaaaagcggaaagacaggcacgtaagtgc 6062253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 7463993 - 7463915
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||| ||||||||||   |||| | |||||||||  |||||||||||| ||||||||||||| | |||||||||||    
T  7463993 caccgttaataattttcaaatgttagcataataaaaaatgcggaaagacaggcacgtgagtgcccctcttttcgctagt 7463915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 19128397 - 19128355
Alignment:
Q  182 aaaagagcggaaagacagacacgtgagtgcccgttttttcgct 224  Q
    ||||||||||||||||| |||||||||||||||| ||||||||    
T  19128397 aaaagagcggaaagacaaacacgtgagtgcccgtcttttcgct 19128355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 32252222 - 32252176
Alignment:
Q  82 aatggtaaacggactaagccaccacccatggtaattgaagggaagag 128  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||||    
T  32252222 aatggtaaacggactaagccaccaaccatgataattgaaaggaagag 32252176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 3295830 - 3295878
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  3295830 aataaaaagagcggaaagac-gacacgtgagtacccgtcttttcgctagt 3295878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 24836945 - 24837018
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcg 222  Q
    |||||||||||||||| |   |||| || ||||||||||||||||||||   ||||||||||||||| ||||||    
T  24836945 caccgttcataatttttaaaagttagcgcaataaaaagagcggaaagacgtgcacgtgagtgcccgtcttttcg 24837018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 33629557 - 33629630
Alignment:
Q  154 ttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||  | |||||| ||||||||||| |||||||| ||||| ||||||||| | |||| ||||||    
T  33629557 ttcataattttcaaacattaacgcaataaaaagagtggaaagacggacacttgagtgcccttctttttgctagt 33629630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 23270848 - 23270908
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagt 209  Q
    ||||||| ||||||||||  | |||||| |||||||||||||||||||| | |||||||||    
T  23270848 caccgtttataattttcaaactttaacgcaataaaaagagcggaaagacgggcacgtgagt 23270908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 25942600 - 25942656
Alignment:
Q  71 ccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    |||||||||| |||||| ||||||||||||||||| ||||  |||||||| ||||||    
T  25942600 ccaatgcctagaatggtgaacggactaagccaccaaccataataattgaacggaaga 25942656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 39840006 - 39839938
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| || |||||||||||||| ||||| || || |||||||||||   |||||||||||||||||||    
T  39840006 atggtgaagggactaagccaccaaccatgatagttaaagggaagagatggaaacttcgtcttcaaccac 39839938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 8990577 - 8990624
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgcta 225  Q
    |||||||||||| ||||||| ||||||||||||| ||| |||||||||    
T  8990577 aataaaaagagcagaaagacggacacgtgagtgctcgtcttttcgcta 8990624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 25326239 - 25326156
Alignment:
Q  69 agccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccacc 152  Q
    |||| ||||| || ||||| |||| |||||||||||| | |||||||||||||| ||||| |||||| ||   |||||||||||    
T  25326239 agccgatgccaaacatggtgaacgaactaagccaccaacgatggtaattgaaggcaagagtaacaaattttaccttcaaccacc 25326156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 43370402 - 43370453
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagttt 229  Q
    |||||||||||| ||||||| |||| |||||||||||| |||| ||||||||    
T  43370402 aataaaaagagcagaaagacggacaggtgagtgcccgtctttttgctagttt 43370453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Complemental strand, 8942662 - 8942628
Alignment:
Q  171 ttaacgtaataaaaagagcggaaagacagacacgt 205  Q
    ||||||||||||||||||||||||||| |||||||    
T  8942662 ttaacgtaataaaaagagcggaaagacggacacgt 8942628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 19314979 - 19315068
Alignment:
Q  62 aactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||| |||||| |||||||  ||||||||||| ||||||||||| ||||| |||||  ||||||   || |||| |||| ||||||||||    
T  19314979 aactattagcctatgcctagcatggtaaacgggctaagccaccaaccatgataattccagggaaataaagcaaatttcgccttcaaccac 19315068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 27843569 - 27843500
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccacc 152  Q
    |||||||| ||||||||  |||| ||||| ||||||||| ||||||||||||  |||  |||||||||||    
T  27843569 atggtaaatggactaagttaccagccatgataattgaagagaagagaaacaagtttcaccttcaaccacc 27843500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 32870139 - 32870188
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||||||||||| ||| ||  ||| |||||||||||    
T  32870139 aataaaaagagcggaaagacagacacatgaatgttcgtcttttcgctagt 32870188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 38445418 - 38445361
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtataa 235  Q
    ||||||||||||||||| |  | ||||||||||||| | ||||||||||||| |||||    
T  38445418 aataaaaagagcggaaaaatgggcacgtgagtgcccttcttttcgctagtttatataa 38445361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 151
Target Start/End: Original strand, 804383 - 804463
Alignment:
Q  71 ccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| ||||| |||||||||||||| |||||||| |||||||| ||  |||| |||| |||| | |||  ||||||||||    
T  804383 ccaattcctaagatggtaaacggacttagccaccagccatggtagttagaggggagagtaacacatttctccttcaaccac 804463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 9051268 - 9051312
Alignment:
Q  192 aaagacagacacgtgagtgcccgt-tttttcgctagtttgtataa 235  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||    
T  9051268 aaagacagacacgtgagtgtccgtctttttcgctagtttgaataa 9051312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 16518372 - 16518428
Alignment:
Q  71 ccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    |||||| ||| | |||| ||||||||||||||| | ||||||||||||| |||||||    
T  16518372 ccaatgtctagagtggtgaacggactaagccactaaccatggtaattgaggggaaga 16518428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 8090640 - 8090506
Alignment:
Q  13 aatatatacaaaagttgcctaacagatcataaacaaaaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatgg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8090640 aatatatacaaaagttgcctaacagatcataaacaaaaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatga 8090541  T
Q  113 taattgaagggaagagaaacaaacttcgtcttcaa 147  Q
    ||||||||||||||||||| ||||| |||||||||    
T  8090540 taattgaagggaagagaaataaactccgtcttcaa 8090506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 40638766 - 40638856
Alignment:
Q  49 aaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttc 139  Q
    |||||| |||||||||| |||||| ||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  40638766 aaaacataaaagaaacttttagcctatgtccaaaatcgtaaacggactaagccaccacccatggtaattgaagggaagagaagcatacttc 40638856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 31640356 - 31640273
Alignment:
Q  68 tagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| ||||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||| |||| |||| ||||||||||    
T  31640356 tagcctatgcctataattgtaaacggactaagccaccatccatggtaattgaggggaagagaagcaaatttcgccttcaaccac 31640273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 20948244 - 20948142
Alignment:
Q  49 aaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaac 148  Q
    |||| ||||||||||  ||||||| |  || || ||||||||||||||||||||||||||||||||||||| | ||||||||  | |||||| |||||||    
T  20948244 aaaaaagaaaagaaaaccttagcctacacccaacatggtaaacggactaagccaccacccatggtaattgaggcgaagagaagaatacttcgccttcaac 20948145  T
Q  149 cac 151  Q
    |||    
T  20948144 cac 20948142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 9420722 - 9420795
Alignment:
Q  56 aaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagaga 129  Q
    ||||||||  ||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||| |||||||||    
T  9420722 aaaagaaaaccttagcctatgcctaaaatagtaaacgggctaagccaccacccatgataattgaggggaagaga 9420795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 27009300 - 27009231
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccacc 152  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||| |||||| ||||    
T  27009300 atggtaaacggactaagccaccaaccatggtaattgaagggaagagaagtaaatttcgccttcaatcacc 27009231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 34753399 - 34753476
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||  | ||| ||||||||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  34753399 accgttcataattttcaaacattagcgtaataaaaagagcagaaagacgggcacgtgagtgcccgtcttttcgctagt 34753476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 45131107 - 45131191
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||||||||||| |  |||||||| |||||||||||||||||||| |||||||||||||||||| || | |||  ||||||||||    
T  45131107 ttagccaatgcccagcatggtaaatggactaagccaccacccatgataattgaagggaagagaagcatatttccccttcaaccac 45131191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 11653153 - 11653232
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||| |||||||||||||  |||||||| |||||||| ||| ||||||||||||||||||||||| | |||||| |||||    
T  11653153 cacctttcataattttcaaacgttaacgcaataaaaaaagcagaaagacagacacgtgagtgcccatcttttcgttagtt 11653232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 24004430 - 24004381
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  24004430 aataaaaagagcggaaagacaggcacgtgagtgcccattttttcgctagt 24004381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 9169947 - 9170022
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||| |  ||||| || ||||||||||| |||||||||| ||||||| ||||||| |||||||||||    
T  9169947 cgttcataatttttaaacgttagcgcaataaaaagagtggaaagacagtcacgtgattgcccgtcttttcgctagt 9170022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 25915095 - 25915017
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||| ||||||||||  ||||| || ||||| |||||| ||||||||  ||||||||||||||| |||||||||||    
T  25915095 caccgtttataattttcaaacgttagcgcaataataagagcagaaagacaagcacgtgagtgcccgtcttttcgctagt 25915017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 36802602 - 36802660
Alignment:
Q  169 cgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| ||| |||||||||||    
T  36802602 cgttagcgtaataaaaagagcggaaagacggacacgcgagtgctcgtcttttcgctagt 36802660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 13450352 - 13450425
Alignment:
Q  154 ttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||  | ||| || |||||||||||||||||||| | ||||||||| ||||| |||||||||||    
T  13450352 ttcataattttcaaacattagcgcaataaaaagagcggaaagacgggcacgtgagtacccgtcttttcgctagt 13450425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 228
Target Start/End: Original strand, 15265766 - 15265845
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||| ||||||||||||  ||||| ||||||||||||||||||||||| | ||||||  ||| ||| |||||| |||||    
T  15265766 caccgctcataattttcaaacgttagcgtaataaaaagagcggaaagacgggcacgtggatgctcgtcttttcgatagtt 15265845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 35916904 - 35916979
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||| |||||||||  |||||||| |||||||||||||||||||   ||| |||||| ||||| |||||||||||    
T  35916904 cgttcctaattttcaaacgttaacgcaataaaaagagcggaaagatgaacatgtgagtacccgtcttttcgctagt 35916979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 9192042 - 9191964
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||  ||||| || ||||||| ||||  |||||| | |||||||||| |||| |||||||||||    
T  9192042 caccgttcataattttcaaacgttagcgcaataaaatgagccaaaagacgggcacgtgagtggccgtcttttcgctagt 9191964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 33133851 - 33133801
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||||||||||||||||||| | ||||||||||| ||| ||||||||||||    
T  33133851 aataaaaagagcggaaagacgggcacgtgagtgctcgtcttttcgctagtt 33133801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 41014472 - 41014550
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||  ||||| || |||||||||||||||||||  | ||||||| || || | |||||||||||    
T  41014472 caccgttcataattttcaaacgttagcgcaataaaaagagcggaaagatggccacgtgaatgtccatcttttcgctagt 41014550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 15508791 - 15508840
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||||   ||||||||| |||||||||||||||||    
T  15508791 aataaaaagagcggaaagacgagcacgtgagtacccgttttttcgctagt 15508840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 21564313 - 21564248
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgtttt 218  Q
    ||||||||||||||  | ||| || ||||||||||| |||||| | ||||||||||||||||||||    
T  21564313 gttcataattttcaaacattagcgcaataaaaagagtggaaagccggacacgtgagtgcccgtttt 21564248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 21885203 - 21885130
Alignment:
Q  154 ttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||  |||||  | |||||||||||| ||||||| | ||||||||||||| | |||||||||||    
T  21885203 ttcataattttcaaacgttagagcaataaaaagagcagaaagacgggcacgtgagtgcccatcttttcgctagt 21885130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 30505838 - 30505774
Alignment:
Q  62 aactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaag 126  Q
    |||| |||||| ||||| || ||||||||| |||||| |||||| ||||| ||||||||||||||    
T  30505838 aactattagcctatgcccaacatggtaaacagactaaaccaccaaccatgataattgaagggaag 30505774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 41633373 - 41633437
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgccc 213  Q
    ||||||||||||||||||  ||||| || ||||||||| ||||||||||   |||||||||||||    
T  41633373 caccgttcataattttcaaacgttagcgcaataaaaagtgcggaaagacgagcacgtgagtgccc 41633437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 20111235 - 20111286
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagttt 229  Q
    |||||||||||||||||||| || ||||||||| | || |||||||||||||    
T  20111235 aataaaaagagcggaaagacggatacgtgagtgtctgtcttttcgctagttt 20111286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 38409105 - 38409046
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaag 126  Q
    |||||| || |||| ||||||||||||||| | |||||| ||||| ||||||||||||||    
T  38409105 ttagcctatacctagaatggtaaacggactgaaccaccaaccatgataattgaagggaag 38409046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 33134404 - 33134330
Alignment:
Q  154 ttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||||||||||||  | ||| || ||||||||||| |||||||| |||| ||||||  |||| ||||||||||||    
T  33134404 ttcataattttcaaacattagcgcaataaaaagagtggaaagacggacatgtgagtatccgtcttttcgctagtt 33134330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 37738061 - 37738127
Alignment:
Q  62 aactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagag 128  Q
    |||| |||||| ||||| |||||||| ||||||||||||||||| |||||  | || ||||||||||    
T  37738061 aactattagcctatgcccaaaatggtgaacggactaagccaccagccatgaaagttaaagggaagag 37738127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 38147818 - 38147896
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||| ||||||||||   ||||||| ||||||| |||||||||||| ||||| |||||  |||| |||| ||||||    
T  38147818 caccgttaataattttcaaatgttaacgcaataaaaggagcggaaagacggacacatgagtatccgtctttttgctagt 38147896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 4160322 - 4160395
Alignment:
Q  155 tcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||| |||||||  || ||||| ||||||||||||||||||||||  || ||| ||| ||| ||||||||||||    
T  4160322 tcattattttcaaacgataacgcaataaaaagagcggaaagacaggtacatgaatgctcgtcttttcgctagtt 4160395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 12617114 - 12617061
Alignment:
Q  154 ttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtga 207  Q
    |||| ||||||||  ||||||||||||||||| ||  |||||||||||||||||    
T  12617114 ttcaaaattttcaaacgttaacgtaataaaaatagtagaaagacagacacgtga 12617061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 41384376 - 41384300
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||  |||||||| |||||||| ||||||||||  | | ||||||| ||||| |||||| ||||    
T  41384376 accgttcataattttcaaacgttaacgcaataaaaa-agcggaaagaagggcgcgtgagttcccgtcttttcgatagt 41384300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 9933071 - 9933119
Alignment:
Q  66 cttagccaatgcctaaaatggtaaacggactaagccaccacccatggta 114  Q
    ||||||||||||||| |||||| |||||| |||||||||| || |||||    
T  9933071 cttagccaatgcctataatggtgaacggattaagccaccaaccgtggta 9933119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 33645830 - 33645902
Alignment:
Q  80 aaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccacc 152  Q
    |||||||| ||| |||||| |||||| |||||||||||||| ||||||| | |||| ||   |||||||||||    
T  33645830 aaaatggtgaacagactaacccaccaaccatggtaattgaaaggaagagtagcaaatttttccttcaaccacc 33645902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 42057209 - 42057161
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagac 197  Q
    ||||||||||||||||||  ||||| || ||||||||||||| ||||||    
T  42057209 caccgttcataattttcaaacgttagcgcaataaaaagagcgaaaagac 42057161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 7e-61; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 47543598 - 47543460
Alignment:
Q  13 aatatatacaaaagttgcctaacagatcataaacaaaaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatgg 112  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  47543598 aatatatacaaaagttgcctaacagatcataaacaaaaagcagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccatcacccatga 47543499  T
Q  113 taattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  47543498 taattgaagggaagagaactaaacttcgtcttcaaccac 47543460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 8036437 - 8036369
Alignment:
Q  157 ataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgcta 225  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  8036437 ataattttcaaacgttaacgtaataaaaagagcagaaagacagacacgtgagtgcacgtcttttcgcta 8036369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 15566656 - 15566576
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagttt 229  Q
    ||||||||||||||||||  | ||||| |||||||| |||||||||||||| ||||||||||||||  |||||||||||||    
T  15566656 caccgttcataattttcaaactttaacataataaaatgagcggaaagacaggcacgtgagtgcccgacttttcgctagttt 15566576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 5800443 - 5800521
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||  | ||| || |||||||||||||||||||| |||||||||||| |||| |||||||||||    
T  5800443 caccgttcataattttcaaacattagcgcaataaaaagagcggaaagacggacacgtgagtgtccgtcttttcgctagt 5800521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 1787153 - 1787226
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgcta 225  Q
    |||||||||||||||  |||||||| ||| |||||||||||||||| |||||||||||| |||| |||||||||    
T  1787153 cgttcataattttcaaacgttaacgcaattaaaagagcggaaagacggacacgtgagtgtccgtcttttcgcta 1787226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 10315198 - 10315127
Alignment:
Q  58 aagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagaga 129  Q
    ||||||| ||||||| ||||| ||||| |||||||| |||||||||||||| |||||||||| |||||||||    
T  10315198 aagaaacacttagcctatgcccaaaatagtaaacgggctaagccaccacccgtggtaattgaggggaagaga 10315127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 19492097 - 19492148
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagttt 229  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  19492097 aataaaaagagcggaaagacagacatgtgagtgcccgtcttttcgctagttt 19492148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 9628301 - 9628257
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  9628301 atggtaaacggactaagccaccaaccatggtaattgaagggaaga 9628257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 4609652 - 4609707
Alignment:
Q  96 taagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||||||||||||||||||||||| ||||||||||| | |||||| ||||||||||    
T  4609652 taagccaccacccatggtaattgaggggaagagaaatatacttcgccttcaaccac 4609707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 31030341 - 31030412
Alignment:
Q  58 aagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagaga 129  Q
    ||||||| ||||||| ||||| ||||| ||||||||  ||||||||||||| |||||||||| |||||||||    
T  31030341 aagaaacacttagcctatgcccaaaatagtaaacgggttaagccaccacccgtggtaattgaggggaagaga 31030412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 3996647 - 3996589
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtataat 236  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||||||| | ||||||    
T  3996647 aataaaaagagcggaaagacggacacgtgagtgctcgtcttttcgctagtatatataat 3996589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 35367470 - 35367547
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||| | ||||||| |  |||||||||| ||||||||  |||||| ||||||||||||||||||||||    
T  35367470 caccgttcataatttac-tgcgttagctcaataaaaagaacggaaagattgacacgcgagtgcccgttttttcgctagt 35367547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 48622039 - 48621961
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||| |||||||| |  ||||| | |||||||||||| |||||||||||||||||| |||| || |||||||||||    
T  48622039 caccgttaataatttttaaacgttagcataataaaaagagaggaaagacagacacgtgaatgcctgtcttttcgctagt 48621961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 34729408 - 34729457
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||| |||||||||| ||||||||||||||||| |||||||||||    
T  34729408 aataaaaagtgcggaaagacggacacgtgagtgcccgtcttttcgctagt 34729457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 15647005 - 15646937
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgtttttt 220  Q
    |||||||||||||||  ||||| || |||||||||||||||||||| | ||||||||||| ||| ||||    
T  15647005 cgttcataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacgtgagtgctcgtctttt 15646937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 17116400 - 17116468
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||| ||||||||||||| ||||| ||| |||||||||||||| || | |||| ||||||||||    
T  17116400 atggtaaacagactaagccaccaaccatgataactgaagggaagagaagcatatttcgccttcaaccac 17116468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 10040600 - 10040679
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagttt 229  Q
    |||||||||||||||||   |||| || |||||||||||| ||||||| | |||||| ||| |||| |||||||||||||    
T  10040600 accgttcataattttcaaatgttagcgcaataaaaagagcagaaagacgggcacgtgggtggccgtcttttcgctagttt 10040679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 19371922 - 19371997
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgct 224  Q
    |||||||||||||||| |  ||||  || |||||||||||||||||||  ||||||| ||||||||| ||||||||    
T  19371922 caccgttcataattttgaaacgttggcgcaataaaaagagcggaaagatggacacgtaagtgcccgtcttttcgct 19371997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 26569824 - 26569741
Alignment:
Q  68 tagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||||| || || || |||||||  |||||||| ||||| |||||||||||||||||| |||  |||| ||||||||||    
T  26569824 tagccaatgcccaacatagtgaacggacatagccaccatccatgataattgaagggaagagaagcaagtttcgccttcaaccac 26569741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 27513228 - 27513150
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||| ||||||||||  | ||| || |||||||| ||  ||||||| ||||||||||||||||| |||||||||||    
T  27513228 caccgttaataattttcaaactttagcgcaataaaaatagaagaaagacggacacgtgagtgcccgtcttttcgctagt 27513150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 36609710 - 36609636
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||| |||||||  |||||||||||||||||| | |||||||| | ||||| |||| |||| |||||||||||    
T  36609710 gttcatgattttcaaacgttaacgtaataaaaaggggggaaagacgggcacgtaagtgtccgtcttttcgctagt 36609636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 40356203 - 40356269
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgt 215  Q
    ||||||||||||||||||  | ||| || | |||||||||| |||||||| ||||||||||||||||    
T  40356203 caccgttcataattttcaaactttagcgcagtaaaaagagcagaaagacaaacacgtgagtgcccgt 40356269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 7809978 - 7809905
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgcta 225  Q
    |||||||||||| || | |||| || | | ||||||||||||| ||| ||| ||||||||||||||||||||||    
T  7809978 cgttcataatttacacgtgttagcgcacttaaaagagcggaaatacaaacatgtgagtgcccgttttttcgcta 7809905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 38174946 - 38174889
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtataa 235  Q
    |||||||||||  ||||||| |||||||| |||||||| ||||||||||||| |||||    
T  38174946 aataaaaagagtagaaagacggacacgtgtgtgcccgtcttttcgctagtttatataa 38174889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 4550508 - 4550560
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagaca 202  Q
    |||||||||||||||||  |||||| | |||||||||||||||||||| ||||    
T  4550508 accgttcataattttcaaacgttaaggcaataaaaagagcggaaagacggaca 4550560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 21766077 - 21766029
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagac 197  Q
    ||||||||||||||||||  ||||| || ||||||||||||||||||||    
T  21766077 caccgttcataattttcaaacgttagcgcaataaaaagagcggaaagac 21766029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 39435170 - 39435226
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagt 209  Q
    ||||||||||||||  ||||| || |||||||||||||||||||| | |||||||||    
T  39435170 gttcataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacgtgagt 39435226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 581643 - 581572
Alignment:
Q  154 ttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgcta 225  Q
    |||||||||||||  ||||| || |||||||| ||||||||||| | |||| | ||| ||||||||||||||    
T  581643 ttcataattttcaaacgttagcgcaataaaaaaagcggaaagacgggcacgcgggtgtccgttttttcgcta 581572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 7774846 - 7774799
Alignment:
Q  181 aaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||||||||||| | ||||||||||| ||| ||||||||||||    
T  7774846 aaaaagagcggaaagacgggcacgtgagtgctcgtattttcgctagtt 7774799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 16683048 - 16682977
Alignment:
Q  155 tcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctag 226  Q
    ||||||||||||  | ||||||  ||||||||| | ||||||||| ||||||||| ||||| ||||||||||    
T  16683048 tcataattttcaaacattaacgcgataaaaagaacagaaagacaggcacgtgagtacccgtcttttcgctag 16682977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 17657284 - 17657213
Alignment:
Q  155 tcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctag 226  Q
    ||||||||||||  | ||||||  ||||||||| | ||||||||| ||||||||| ||||| ||||||||||    
T  17657284 tcataattttcaaacattaacgcgataaaaagaacagaaagacaggcacgtgagtacccgtcttttcgctag 17657213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 21080091 - 21080021
Alignment:
Q  157 ataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||  | ||| ||||||||||||||  ||||||| ||||||| ||||||| | |||||||||||    
T  21080091 ataattttcaaactttagcgtaataaaaagagtagaaagacggacacgtaagtgcccatcttttcgctagt 21080021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 31177088 - 31177038
Alignment:
Q  177 taataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||  ||||||||||||||||||||| |||| ||| |||||||    
T  31177088 taataaaaagaatggaaagacagacacgtgagtgtccgtctttccgctagt 31177038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 34237272 - 34237214
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaa 125  Q
    |||||| ||||| || ||||| || |||||||||||||| ||||| |||||||||||||    
T  34237272 ttagcctatgcccaacatggtgaaaggactaagccaccaaccatgataattgaagggaa 34237214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 42963176 - 42963099
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||   | || || |||||||||||||||||||  ||||| |||||| |||| |||||||||||    
T  42963176 caccgttcataattttcaaatgctagcgcaataaaaagagcggaaaga-tgacacatgagtggccgtcttttcgctagt 42963099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 20055834 - 20055899
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgtttt 218  Q
    ||||||||||||||    |||||| |||||||||| || |||||| |||||||||||||| |||||    
T  20055834 gttcataattttcaaatattaacgcaataaaaagaacgcaaagacggacacgtgagtgcctgtttt 20055899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 27240850 - 27240805
Alignment:
Q  184 aagagcggaaagacagacacgtgagtgcccgttttttcgctagttt 229  Q
    |||||||||||||| | ||| ||||||||||| |||||||||||||    
T  27240850 aagagcggaaagactggcacatgagtgcccgtcttttcgctagttt 27240805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 40658859 - 40658822
Alignment:
Q  190 ggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  40658859 ggaaagacagacatgtgggtgcccgttttttcgctagt 40658822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 12170723 - 12170767
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaa 193  Q
    ||||||||||||||||||  | ||||| |||||||||||||||||    
T  12170723 caccgttcataattttcaaactttaacataataaaaagagcggaa 12170767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 15470330 - 15470294
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaa 185  Q
    ||||||||||||||||||  |||||||||||||||||    
T  15470330 caccgttcataattttcaaacgttaacgtaataaaaa 15470294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 46759480 - 46759432
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagac 197  Q
    |||||||||| |||||||  ||||| || ||||||||||||||||||||    
T  46759480 caccgttcattattttcaaacgttagcgcaataaaaagagcggaaagac 46759432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 3e-60; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 32196744 - 32196881
Alignment:
Q  13 aatatatacaaaagttgcctaacagatcataaacaaaaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatgg 112  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  32196744 aatatatacaaaagttgcctaacagatcataaacaaaaagcagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccatcacccatgt 32196843  T
Q  113 taattgaagggaagagaaacaaacttcgtcttcaacca 150  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  32196844 taattgaagggaagagaactaaacttcgtcttcaacca 32196881  T

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Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 7824105 - 7824202
Alignment:
Q  54 agaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||||| ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||   | |||||| ||||||||||    
T  7824105 agaaaagaaacacttagcctatgcccaaaatggtgaacgggctaagccaccacccatggtaattgaggggaagagaggaatacttcgccttcaaccac 7824202  T

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Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 11324584 - 11324501
Alignment:
Q  68 tagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| ||||| | ||||| |||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||||||||    
T  11324584 tagcctatgcccataatggcaaacggactaagccaccacccatgataattgaagggaagagaagcaaatttcgccttcaaccac 11324501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 5667346 - 5667429
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaacca 150  Q
    |||||| ||||||||||| ||||||||||||| |||||| ||||| |||||||||| |||||  | |||| |||||||||||||    
T  5667346 ttagcctatgcctaaaatagtaaacggactaatccaccaaccatgataattgaaggaaagagttataaacctcgtcttcaacca 5667429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 18673482 - 18673422
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||| |||||||    
T  18673482 ttagccaatgcctaaaatagtaaacgggctaagccaccaaccatgataattgaggggaaga 18673422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 19146037 - 19145961
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||||||||||||||  | ||||   |||||||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  19146037 cgttcataattttcaaacattaattcaataaaaagagcggaaagacggacacgtaagtgcccgtgttttcgctagtt 19145961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 16853125 - 16853062
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaa 130  Q
    |||||| ||| | ||||||||||||||||||||||||||||||| ||||||||  |||||||||    
T  16853125 ttagcctatgtccaaaatggtaaacggactaagccaccacccatagtaattgagaggaagagaa 16853062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 24062809 - 24062884
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||||||||  ||| | || ||||||||||||||||| || | ||||||||||||||| ||||||||||||    
T  24062809 gttcataattttcaaacgtcagcgcaataaaaagagcggaaaaacgggcacgtgagtgcccgtcttttcgctagtt 24062884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 17943814 - 17943770
Alignment:
Q  176 gtaataaaaagagcggaaagacagacacgtgagtgcccgtttttt 220  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  17943814 gtaataaaaagagcggaaagacaggcacgtgagtgcccgtatttt 17943770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 9907276 - 9907213
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaa 130  Q
    |||||| |||||||||||||| || ||| ||||||||||| |||| ||||||||||||| ||||    
T  9907276 ttagcctatgcctaaaatggtgaatggattaagccaccacgcatgataattgaagggaatagaa 9907213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 34715017 - 34714970
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaa 130  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||||    
T  34715017 atggtaaacagactaagccaccaaccatggtaattgatgggaagagaa 34714970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 12169746 - 12169672
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||  | |||||| |||||||||||||||||||| | |||| ||||||  || |||||||||||    
T  12169746 gttcataattttcaaacattaacgcaataaaaagagcggaaagacgggcacgagagtgcttgtcttttcgctagt 12169672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 32533067 - 32533129
Alignment:
Q  89 aacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||||||||||| ||||| || || |||||||||| | |||||||| |||||||||||    
T  32533067 aacggactaagccaccaaccatgatagttaaagggaagagtagcaaacttcatcttcaaccac 32533129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 22793141 - 22793080
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgccc 213  Q
    |||| ||||| | |||||||||| | |||||||||| |||||||||| ||||||||||||||    
T  22793141 cgttgataatctacatgcgttaatgcaataaaaagaacggaaagacaaacacgtgagtgccc 22793080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 32349256 - 32349183
Alignment:
Q  154 ttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||  ||||| || |||||| |||| | ||| |||||||||||||||||| | |||||||||||    
T  32349256 ttcataattttcaaacgttagcgcaataaagagagagaaaaaacagacacgtgagtgcccctcttttcgctagt 32349183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 17292767 - 17292815
Alignment:
Q  87 taaacggactaagccaccacccatggtaattgaagggaagagaaacaaa 135  Q
    |||||||||||||||| || ||||| |||||||||||||||||| ||||    
T  17292767 taaacggactaagccatcaaccatgataattgaagggaagagaagcaaa 17292815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 21236861 - 21236932
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttc 221  Q
    |||||| ||||||| ||||||||| |  |||||||||||||| ||||  || |||||||||||||| |||||    
T  21236861 accgtttataatttacatgcgttagcacaataaaaagagcgggaagatggaaacgtgagtgcccgtcttttc 21236932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 26854239 - 26854168
Alignment:
Q  157 ataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||||| ||||| || |||||||||||| ||| ||| | || ||| |||||||| ||||||||||||    
T  26854239 ataattttcatacgttagcgcaataaaaagagcagaatgacgggcaagtgggtgcccgtcttttcgctagtt 26854168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 33573663 - 33573738
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||  ||||| || || |||||||||| |||||| |  || ||||||||||| |||||||||||    
T  33573663 cgttcataattttcaaacgttagcgcaaaaaaaagagcgaaaagacgggtacttgagtgcccgtcttttcgctagt 33573738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 22469527 - 22469477
Alignment:
Q  80 aaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaa 130  Q
    |||||||| || ||||||||||||||  |||| ||||||||||||||||||    
T  22469527 aaaatggtgaatggactaagccaccaagcatgataattgaagggaagagaa 22469477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 29599170 - 29599212
Alignment:
Q  88 aaacggactaagccaccacccatggtaattgaagggaagagaa 130  Q
    |||||| ||||||||||| |||| |||||||||||||||||||    
T  29599170 aaacgggctaagccaccaaccatagtaattgaagggaagagaa 29599212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 151
Target Start/End: Original strand, 9200880 - 9200976
Alignment:
Q  48 aaaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaa 147  Q
    ||||||||||||||||||||||||| ||| | || |||||||||       | || ||||||| |||||||| ||||||||||| | |||||| |||| |    
T  9200880 aaaaacagaaaagaaactcttagcctatgtccaatatggtaaac-------gacaacacccattgtaattgaggggaagagaaatatacttcgccttcta 9200972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 11298592 - 11298657
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| |||||||||||||| ||||| || || ||||||||||  |||||||||  ||||||||||    
T  11298592 gtaaatggactaagccaccaaccatgatagttaaagggaagagtgacaaacttcaccttcaaccac 11298657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 7451581 - 7451525
Alignment:
Q  171 ttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||| |||||||||||||||| ||| | |||||||||| || | |||||||||||    
T  7451581 ttaacgcaataaaaagagcggaatgacgggcacgtgagtggccatcttttcgctagt 7451525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 20469739 - 20469691
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacaga 200  Q
    |||||||||||||||  |||||| ||||||||||||||| ||| |||||    
T  20469739 cgttcataattttcaaacgttaatgtaataaaaagagcgaaaatacaga 20469691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 28592858 - 28592934
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgcta 225  Q
    |||| |||||||||||||  | ||| || |||||||||||||||||||| |  |||| | ||||||| |||||||||    
T  28592858 caccattcataattttcaaccattagcgcaataaaaagagcggaaagacgggtacgtaaatgcccgtcttttcgcta 28592934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 32531312 - 32531360
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagac 197  Q
    ||||||| ||||||||||  ||||| || ||||||||||||||||||||    
T  32531312 caccgttaataattttcaaacgttagcgcaataaaaagagcggaaagac 32531360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 32160240 - 32160103
Alignment:
Q  13 aatatatacaaaagttgcctaacagatcataaacaaaaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatgg 112  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32160240 aatatatacaaaagttacctaagagatcataaacaaaaa-cagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccaccaatgg 32160142  T
Q  113 taattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||||||||| |||||||| |||||||||| ||||||||    
T  32160141 taattgaaggaaagagaaataaacttcgtcctcaaccac 32160103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 15259536 - 15259434
Alignment:
Q  49 aaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaac 148  Q
    |||||||||||||||||||||||| ||||| |  |||||||||||||||||| |||||||||||||||||| ||||||||||| | |||||| |||||||    
T  15259536 aaaacagaaaagaaactcttagcctatgcccagtatggtaaacggactaagctaccacccatggtaattgaggggaagagaaatatacttcgccttcaac 15259437  T
Q  149 cac 151  Q
    |||    
T  15259436 cac 15259434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 26260869 - 26260785
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  26260869 ttagccaatgcccaacatggtaaatggactaagccaccacccatgataattgaagggaagagaagcaaacttcgccttcaaccac 26260785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 27363725 - 27363820
Alignment:
Q  56 aaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||  ||||||| ||||| |||||||||||||||||||||||| ||||||||||||||| || |||||||    |||||| ||||||||||    
T  27363725 aaaagaaaaccttagcctatgcccaaaatggtaaacggactaagccacaacccatggtaattgagggaaagagaagagtacttcgccttcaaccac 27363820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 151
Target Start/End: Complemental strand, 27568480 - 27568417
Alignment:
Q  88 aaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  27568480 aaacagactaagccaccacccatggtaattgaagggaagagaaacaaattttgccttcaaccac 27568417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 37705710 - 37705631
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||||||||||||  ||||| || |||||||||||| |||||||||| | |||||||||||| ||||||||||||    
T  37705710 caccgttcataattttcaaacgttagcgcaataaaaagagcagaaagacagatatgtgagtgcccgtcttttcgctagtt 37705631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 11842850 - 11842773
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||||| | ||||||||| ||||| |||| ||||||    
T  11842850 caccgttcataattttcaaacgttaacgcaataaaaagagcggaaagac-ggcacgtgagttcccgtctttttgctagt 11842773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 33194088 - 33194166
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||| ||||||||||| |  |||||||| |||||||||||||||||||  |||||||||||||| || |||||||||||    
T  33194088 caccattcataatttttaaacgttaacgcaataaaaagagcggaaagaaggacacgtgagtgcctgtattttcgctagt 33194166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 47402511 - 47402437
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||  ||||| || ||||||||||| |||||||||| ||||| ||||||||| |||||||||||    
T  47402511 gttcataattttcaaacgttaccgcaataaaaagagtggaaagacaggcacgtaagtgcccgtcttttcgctagt 47402437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 44675206 - 44675129
Alignment:
Q  74 atgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| || ||| ||||||||||||||||||| ||||| |||||||||||||| ||| |||| |||| ||||||||||    
T  44675206 atgcccaacatgataaacggactaagccaccaaccatgataattgaagggaagggaagcaaatttcgccttcaaccac 44675129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 17128599 - 17128543
Alignment:
Q  71 ccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    ||||||||||| |||||||| |||||||||||||| | |||||||||||||||||||    
T  17128599 ccaatgcctaacatggtaaaaggactaagccaccaacaatggtaattgaagggaaga 17128543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 36098596 - 36098660
Alignment:
Q  62 aactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaag 126  Q
    ||||||||||| ||||| || ||||| ||||||||||||||||| ||||| ||||||||||||||    
T  36098596 aactcttagcctatgcccaacatggtgaacggactaagccaccagccatgataattgaagggaag 36098660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 45478905 - 45478830
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||| ||||| | |||||||||||| |||||||| |||||||||||   ||||||||||||||| |||||||||||    
T  45478905 cgttgataatatacatgcgttaacgcaataaaaaaagcggaaagacgagcacgtgagtgcccgtcttttcgctagt 45478830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 9484937 - 9484879
Alignment:
Q  93 gactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||||| |||||| ||||| ||||||||||||||||||||||| |||| ||||||||||    
T  9484937 gactaaaccaccaaccatgataattgaagggaagagaaacaaatttcgccttcaaccac 9484879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 38619501 - 38619431
Alignment:
Q  157 ataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||  | |||||| |||||||||||||||||||| ||||||||| ||||| | |||||||||||    
T  38619501 ataattttcaaaccttaacgcaataaaaagagcggaaagacggacacgtgaatgcccatcttttcgctagt 38619431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 48973750 - 48973697
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttc 139  Q
    |||||||||||||||||||||||||| ||||| ||||||||||  |||||||||    
T  48973750 gtaaacggactaagccaccacccatgataattaaagggaagagttacaaacttc 48973697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 52626608 - 52626559
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaac 132  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  52626608 atggtaaatggactaagccaccaaccatgataattgaagggaagagaaac 52626559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 1581069 - 1580999
Alignment:
Q  157 ataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||  | ||| || |||||||||||||||||||| ||||| |||||| |||| |||||||||||    
T  1581069 ataattttcaaactttagcgcaataaaaagagcggaaagacggacacctgagtgtccgtcttttcgctagt 1580999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 27264711 - 27264610
Alignment:
Q  56 aaaagaaactcttagccaatgcctaaaatggtaaacggactaagccacc------acccatggtaattgaagggaagagaaacaaacttcgtcttcaacc 149  Q
    ||||||||  ||||||| ||||| ||||| |||||||||||||||||||      ||||||||||||||| ||||||||||    |||||| ||||||||    
T  27264711 aaaagaaaaccttagcctatgcccaaaatagtaaacggactaagccaccgccaccacccatggtaattgaggggaagagaagagtacttcgccttcaacc 27264612  T
Q  150 ac 151  Q
    ||    
T  27264611 ac 27264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 34011090 - 34011016
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgct 224  Q
    |||||||||||||||||  |||||  | |||||||||||||||||||| | ||||||| |||| || ||||||||    
T  34011090 accgttcataattttcaaacgttagtgcaataaaaagagcggaaagacgggcacgtgactgcctgtcttttcgct 34011016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 38133034 - 38133104
Alignment:
Q  81 aaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||||| ||| |||||||||||||| |||| ||| |||||||||||| |||||||  ||| ||||||||||    
T  38133034 aaatggcaaatggactaagccaccatccattgtagttgaagggaagaaaaacaaatctcgccttcaaccac 38133104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 40708441 - 40708491
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaaca 133  Q
    ||||||||||||||||||||||   |||| |||||||||||||||||||||    
T  40708441 atggtaaacggactaagccaccgaacatgataattgaagggaagagaaaca 40708491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 28442145 - 28442210
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| |||||||||||||| ||||| || || ||||||||||| |||||||||  ||||||||||    
T  28442145 gtaaatggactaagccaccaaccatgatagttaaagggaagagagacaaacttcaccttcaaccac 28442210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 46880213 - 46880266
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagaca 202  Q
    ||||||||||||||||||  |||||| | |||||||||||||||||||| ||||    
T  46880213 caccgttcataattttcaaacgttaatgcaataaaaagagcggaaagacggaca 46880266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 4242263 - 4242319
Alignment:
Q  151 ccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtga 207  Q
    ||||| ||||||||||  ||||| | ||||||||||||||||||||| |||||||||    
T  4242263 ccgttaataattttcaaacgttagcataataaaaagagcggaaagacggacacgtga 4242319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 21336328 - 21336392
Alignment:
Q  157 ataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttc 221  Q
    ||||||||||   ||||||||||||| |||||| |||||||| |||||||| ||||||| |||||    
T  21336328 ataattttcaaatgttaacgtaataagaagagcagaaagacaaacacgtgaatgcccgtcttttc 21336392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 44921795 - 44921719
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctag 226  Q
    |||||||||||||||||  ||||| || ||||||||||||||| | || ||||||| |||| |||| || |||||||    
T  44921795 accgttcataattttcaaacgttaccgcaataaaaagagcggagaaacggacacgtaagtggccgtcttctcgctag 44921719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 10729300 - 10729221
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||||||||| ||  ||||| || ||||||||||||||||||||   ||||||| | | ||| ||||||||||||    
T  10729300 caccgttcataatttccaaacgttagcgcaataaaaagagcggaaagacgtgcacgtgattacacgtcttttcgctagtt 10729221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 2653704 - 2653762
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaa 125  Q
    |||||||||||||| ||| | |||||| ||||||||||| ||||| ||||||| |||||    
T  2653704 ttagccaatgcctagaatagaaaacgggctaagccaccaaccatgttaattgaggggaa 2653762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 11409177 - 11409231
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacac 203  Q
    |||| |||||||||||||  | ||| || ||||||||||||||||||||||||||    
T  11409177 caccattcataattttcaaactttatcgcaataaaaagagcggaaagacagacac 11409231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 16389102 - 16389144
Alignment:
Q  169 cgttaacgtaataaaaagagcggaaagacagacacgtgagtgc 211  Q
    ||||||||||||||||||| || |||| |||||||||||||||    
T  16389102 cgttaacgtaataaaaagaacgaaaaggcagacacgtgagtgc 16389144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 44648458 - 44648508
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||||||||||||||||||| |||| |||||||||  | ||||||||||||    
T  44648458 aataaaaagagcggaaagacggacatgtgagtgcctatcttttcgctagtt 44648508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 650169 - 650120
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||||| | ||| ||||||||||| ||| |||||||    
T  650169 aataaaaagagcggaaagacgggcacatgagtgcccgtctttgcgctagt 650120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 5411838 - 5411773
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||||||||||| || ||||| || || ||||||||||  |||||||||  ||||||||||    
T  5411838 gtaaacggactaagccaacaaccatgatagttaaagggaagagttacaaacttcaccttcaaccac 5411773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 5880790 - 5880745
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagac 197  Q
    |||||||||||||||  |||||||| ||||||||||||| ||||||    
T  5880790 cgttcataattttcaaacgttaacgcaataaaaagagcgaaaagac 5880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 5965620 - 5965559
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgccc 213  Q
    |||||||||||||||  |||||  | |||||||||||| ||||||| | |||||||||||||    
T  5965620 cgttcataattttcaaacgttagagcaataaaaagagcagaaagacgggcacgtgagtgccc 5965559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 9398187 - 9398232
Alignment:
Q  180 taaaaagagcggaaagacagacacgtgagtgcccgttttttcgcta 225  Q
    ||||||||| |||||||| | ||||||||||||||| |||||||||    
T  9398187 taaaaagagtggaaagacgggcacgtgagtgcccgtcttttcgcta 9398232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 31528844 - 31528893
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||||||  ||||||||||| ||| ||||| |||||    
T  31528844 aataaaaagagcggaaagacatgcacgtgagtgctcgtcttttctctagt 31528893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 48420168 - 48420241
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgc 223  Q
    |||||| |||||||| |  |||||||| ||||||||||||| |||||    ||||||||||||||| |||||||    
T  48420168 accgttaataatttttaaacgttaacgcaataaaaagagcgtaaagatgagcacgtgagtgcccgtcttttcgc 48420241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 7643122 - 7643082
Alignment:
Q  65 tcttagccaatgcctaaaatggtaaacggactaagccacca 105  Q
    |||||||||||||||| |||||| |||||| ||||||||||    
T  7643122 tcttagccaatgcctataatggtgaacggattaagccacca 7643082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 8209307 - 8209235
Alignment:
Q  155 tcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||| |||||||  |||||||| |||| |||||||||||||||  |||| |||||| |  |||||||||||||    
T  8209307 tcatgattttcaatcgttaacgcaatataaagagcggaaagacgaacacatgagtgtctattttttcgctagt 8209235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 8527133 - 8527077
Alignment:
Q  71 ccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    |||||| || ||| |||||| |||||||| ||||| ||||| |||||||||||||||    
T  8527133 ccaatgtctgaaaaggtaaatggactaagtcaccaaccatgataattgaagggaaga 8527077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 25392319 - 25392387
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||||||||| |||||||||| | | ||| ||||||||||||| | ||  |||||||| ||||||||||    
T  25392319 atggtaaacgaactaagccactaacaatgataattgaagggaaaataagaaaacttcgccttcaaccac 25392387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 4741168 - 4741033
Alignment:
Q  13 aatatatacaaaagttgcct-aacagatcataaacaaaaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatg 111  Q
    ||||||||||| |||||||| |||||| ||||||    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  4741168 aatatatacaatagttgcctgaacagagcataaa----aaacagaaaagaaactcttagcctatgcctaaaatggtaaacggactaagccatcacccatg 4741073  T
Q  112 gtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  4741072 gtaattgaagggaagagaaatatacttcgtcttcaaccac 4741033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 13043485 - 13043383
Alignment:
Q  49 aaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaac 148  Q
    |||| ||||||||||||||||||| ||||| |||||||| |||||  ||||||||||||||||||| |||| ||||||||| | | |||||| |||||||    
T  13043485 aaaatagaaaagaaactcttagcctatgcccaaaatggtgaacgggttaagccaccacccatggtagttgaggggaagagagaaatacttcgccttcaac 13043386  T
Q  149 cac 151  Q
    |||    
T  13043385 cac 13043383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 13051562 - 13051460
Alignment:
Q  49 aaaacagaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaac 148  Q
    |||| ||||||||||||||||||| ||||| |||||||| |||||  ||||||||||||||||||| |||| ||||||||| | | |||||| |||||||    
T  13051562 aaaatagaaaagaaactcttagcctatgcccaaaatggtgaacgggttaagccaccacccatggtagttgaggggaagagagaaatacttcgccttcaac 13051463  T
Q  149 cac 151  Q
    |||    
T  13051462 cac 13051460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 22177561 - 22177639
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||||| |||||| ||||| |||||    
T  22177561 caccgttcataattttcaaacgttaacgcaataaaaagagcggaaagagagacacgtgagcgcccgtcttttcactagt 22177639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 54768140 - 54768215
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||  |||||| | ||||||||||||| |||||||||||||||||||||| | |||||||||||    
T  54768140 cgttcataattttcaaacgttaatgcaataaaaagagcgaaaagacagacacgtgagtgcccatcttttcgctagt 54768215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 14788970 - 14788901
Alignment:
Q  82 aatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| |||| |||||||||||||| ||||||||||| |||||||||||||||| |||| ||||||||||    
T  14788970 aatggcaaactgactaagccaccactcatggtaattggagggaagagaaacaaatttcgccttcaaccac 14788901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 38177025 - 38176949
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||||||| |  ||||| || |||||||| |||||||||||||||||||||||||| || ||||||||||||    
T  38177025 cgttcataattttgaaacgttatcgcaataaaaatagcggaaagacagacacgtgagtgcctgtcttttcgctagtt 38176949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 47161106 - 47161022
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||||||||||||||||   ||||||| ||||||||||| |||||||||||||| |||||||||  |||||||  ||||||||||    
T  47161106 ttagccaatgcctaaaacaataaacggtctaagccaccaaccatggtaattgaatggaagagaaggaaacttcaccttcaaccac 47161022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 22102612 - 22102690
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||  |||||||| ||||||||||| |||||||  | ||||||||||||||| ||||| |||||    
T  22102612 caccgttcataattttcaaacgttaacgcaataaaaagagtggaaagaggggcacgtgagtgcccgtcttttcactagt 22102690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 20017410 - 20017487
Alignment:
Q  74 atgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| |||||||| ||||||| ||||||||| |||||||| || |||||||| |||||||| ||| |||||||||||    
T  20017410 atgcccaaaatggtgaacggacaaagccaccagccatggtagtttaagggaagtgaaacaaatttcttcttcaaccac 20017487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 6894304 - 6894228
Alignment:
Q  74 atgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaacca 150  Q
    ||||||||||| ||||||||||||| |||||| ||||| ||||||||||||||||  | |||| ||| |||||||||    
T  6894304 atgcctaaaatagtaaacggactaatccaccaaccatgataattgaagggaagagttataaacctcgccttcaacca 6894228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 38277624 - 38277553
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgtttttt 220  Q
    |||||||| |||||||||  |||||| ||| ||||||||||||||||||  |||||||||||||||| ||||    
T  38277624 caccgttcgtaattttcaaacgttaatgtagtaaaaagagcggaaagacgaacacgtgagtgcccgtctttt 38277553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 49758291 - 49758212
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||| |||| ||||||||  |||||||| ||||||||||||| |||||| | ||||||||||||||| ||| ||||||||    
T  49758291 cacccttcaaaattttcaaacgttaacgcaataaaaagagcgaaaagacgggcacgtgagtgcccgtctttacgctagtt 49758212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 12947907 - 12947969
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaac 148  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||  ||||||||| |||||||    
T  12947907 gtaaacggactaaaccaccacccatagtaattgaaggaaagagaggcaaacttcgacttcaac 12947969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 6926050 - 6925997
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttc 139  Q
    |||||||||||||||||||||||||| ||||| ||||||||||  |||||||||    
T  6926050 gtaaacggactaagccaccacccatgataattaaagggaagagttacaaacttc 6925997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 21408114 - 21408170
Alignment:
Q  71 ccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    |||||||||| ||| | |||||||||||||||||| ||||||||||||| |||||||    
T  21408114 ccaatgcctagaatagaaaacggactaagccaccaaccatggtaattgaggggaaga 21408170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 18388655 - 18388580
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||| ||||||||||  |||||  | |||||||||||||||||||| | ||||||||||||||| |||| ||||||    
T  18388655 cgtttataattttcaaacgttagggcaataaaaagagcggaaagactgccacgtgagtgcccgtctttttgctagt 18388580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 18461181 - 18461102
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||||||||||||  ||||| || |||||||||||   ||||| | ||| |||||||||||| ||||||||||||    
T  18461181 caccgttcataattttcaaacgttagcgcaataaaaagagaataaagataaacatgtgagtgcccgtcttttcgctagtt 18461102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 151
Target Start/End: Complemental strand, 25845761 - 25845682
Alignment:
Q  72 caatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||| ||||||||  | |||||||||||||| |||||||| || ||||| ||||||  |||||||| ||||||||||    
T  25845761 caatgcccaaaatggtgtatggactaagccaccaaccatggtagttcaagggcagagaaggaaacttcgccttcaaccac 25845682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 5811995 - 5811917
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||| ||||||||||   |||| || |||||||||||||||||||| | || |||||||| ||| |||||||||||    
T  5811995 caccgttaataattttcaaatgttagcgaaataaaaagagcggaaagacgggcatgtgagtgctcgtcttttcgctagt 5811917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 18386765 - 18386707
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtataat 236  Q
    ||||||||||| |||| ||| |||| ||||| |||||| ||||||||||||||||||||    
T  18386765 aataaaaagagtggaatgacggacatgtgagagcccgtcttttcgctagtttgtataat 18386707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 14266015 - 14266064
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||||| ||||||||||||||| | |||| ||||||    
T  14266015 aataaaaagagcggaaagacggacacgtgagtgcccttctttttgctagt 14266064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 53876881 - 53876934
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttc 139  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||  |||||||||    
T  53876881 gtaaacggaccaagccaccacccatgataattaaagggaagagttacaaacttc 53876934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 7639654 - 7639710
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgt 205  Q
    |||| |||||||||||||  ||||| || |||||||||||||||||||||| |||||    
T  7639654 caccattcataattttcaaacgttagcgcaataaaaagagcggaaagacaggcacgt 7639710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 7777766 - 7777838
Alignment:
Q  157 ataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtg-cccgttttttcgctagtt 228  Q
    ||||||||||  | ||| ||||||||||||||||| ||||| | |||||||||| ||||| ||||||||||||    
T  7777766 ataattttcaaacattagcgtaataaaaagagcggtaagacgggcacgtgagtgccccgtcttttcgctagtt 7777838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 21091849 - 21091777
Alignment:
Q  154 ttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctag 226  Q
    |||||||||||||  |||||  | ||||||||||| |||||||| |||||||||||| || | ||||||||||    
T  21091849 ttcataattttcaaacgttagtgcaataaaaagagaggaaagacggacacgtgagtgtccatcttttcgctag 21091777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 22258484 - 22258404
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagttt 229  Q
    ||||||| ||||||||||| |||||  | ||||||||||| | |||||| | |||| || ||||||| |||||||||||||    
T  22258484 caccgttaataattttcatacgttagtgaaataaaaagagagaaaagacgggcacgagattgcccgtcttttcgctagttt 22258404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 33388586 - 33388634
Alignment:
Q  99 gccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaa 147  Q
    ||||||| |||||  ||||||||||||||||| ||||||||||||||||    
T  33388586 gccaccaaccatgtaaattgaagggaagagaagcaaacttcgtcttcaa 33388634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 45701789 - 45701717
Alignment:
Q  157 ataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagttt 229  Q
    ||||||||||  | ||| || |||||||||| ||||||||||  |||||||||| |||| |||||||||||||    
T  45701789 ataattttcaaacattagcgcaataaaaagaacggaaagacaagcacgtgagtgtccgtcttttcgctagttt 45701717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 46931786 - 46931713
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgct 224  Q
    ||||||||||||||||||  ||||| ||||||||||  |||||||| || | |||| |||||||||| ||||||||    
T  46931786 caccgttcataattttcaaacgttagcgtaataaaa--agcggaaaaacgggcacgagagtgcccgtcttttcgct 46931713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 12565342 - 12565299
Alignment:
Q  181 aaaaagagcggaaagacagacacgtgagtgcccgttttttcgct 224  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||    
T  12565342 aaaaagagcggaaagacaagcacgtgagtgcccgtcttttcgct 12565299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 13043186 - 13043131
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgag 208  Q
    ||||||||||||||  ||||| || ||||||||||||||||||||  |||||||||    
T  13043186 gttcataattttcaaacgttagcgcaataaaaagagcggaaagacgaacacgtgag 13043131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 13051263 - 13051208
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgag 208  Q
    ||||||||||||||  ||||| || ||||||||||||||||||||  |||||||||    
T  13051263 gttcataattttcaaacgttagcgcaataaaaagagcggaaagacgaacacgtgag 13051208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 13259741 - 13259698
Alignment:
Q  181 aaaaagagcggaaagacagacacgtgagtgcccgttttttcgct 224  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||    
T  13259741 aaaaagagcggaaagacaagcacgtgagtgcccgtcttttcgct 13259698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 265159 - 265237
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||||| |||||  ||||| || |||||||||||||||||||| | ||||  | ||||| | ||||||||||||    
T  265159 accgttcataactttcaaacgttagcgcaataaaaagagcggaaagacgggcacgcaaatgcccatcttttcgctagtt 265237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 2454363 - 2454437
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgc 223  Q
    ||||||||||||||||||   ||||||  |||||||| ||| |||||  |||||||||||| ||||| |||||||    
T  2454363 caccgttcataattttcaaatgttaacaaaataaaaaaagcagaaagttagacacgtgagtacccgtcttttcgc 2454437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 5907194 - 5907116
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||| |||||||||| |  ||||| ||||||||||||||||||||||  | ||||||| | ||||| ||||| |||||    
T  5907194 caccgctcataattttgaaacgttagcgtaataaaaagagcggaaagatgggcacgtgactacccgtcttttcactagt 5907116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 35379579 - 35379637
Alignment:
Q  169 cgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||| || |||||||||||||||||||| |||||||| || ||| | |||||||||||    
T  35379579 cgttagcgcaataaaaagagcggaaagacggacacgtgggtacccatcttttcgctagt 35379637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 234
Target Start/End: Original strand, 5530826 - 5530891
Alignment:
Q  169 cgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtata 234  Q
    |||||| | |||||||||||| ||||||| | ||||||||||||  | ||||||||||||| ||||    
T  5530826 cgttaatgcaataaaaagagcagaaagacgggcacgtgagtgccgatcttttcgctagtttttata 5530891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 8074647 - 8074706
Alignment:
Q  83 atggtaaacggactaag---ccaccacccatggtaattgaagggaagagaaacaaacttc 139  Q
    |||||||||||||||||   |||||||||||| |||||||||| ||||||| || |||||    
T  8074647 atggtaaacggactaagccaccaccacccatgataattgaaggaaagagaagcatacttc 8074706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 17438630 - 17438550
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacag--acacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||  | ||| || || |||||||||| ||||||||  ||||||||||||  || |||||||||||    
T  17438630 caccgttcataattttcaaacattagcgcaacaaaaagagcgaaaagacaggtacacgtgagtgcgtgtcttttcgctagt 17438550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 19225119 - 19225168
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagaca 198  Q
    ||||||||||||||||||  |||||||| |||||||||||  ||||||||    
T  19225119 caccgttcataattttcaaacgttaacgcaataaaaagagtagaaagaca 19225168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 19245528 - 19245585
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtg 210  Q
    |||||||||||| |  ||||| || |||||||||||||||||||| ||||||| ||||    
T  19245528 gttcataatttttaaacgttagcgcaataaaaagagcggaaagacggacacgtaagtg 19245585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 21078857 - 21078914
Alignment:
Q  171 ttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||||| |||||| ||||||||||||| | ||||||||||||| | ||||| ||||||    
T  21078857 ttaacgcaataaagagagcggaaagacgggcacgtgagtgcccatcttttctctagtt 21078914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 22534102 - 22534037
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| |||||||||||||||||||| || || || |||||||  |||||||||  ||||||||||    
T  22534102 gtaaatggactaagccaccacccatgatagttaaaaggaagagtgacaaacttcaccttcaaccac 22534037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 29542387 - 29542452
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| |||||||||||||| ||||| || || ||||||||||  |||||||||  ||||||||||    
T  29542387 gtaaatggactaagccaccaaccatgatagttaaagggaagagtgacaaacttcaccttcaaccac 29542452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 31766517 - 31766460
Alignment:
Q  170 gttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||| |||||||||||| ||||||| ||||||||||| |||   |||||||||||    
T  31766517 gttaacgcaataaaaagagccgaaagacggacacgtgagtacccaacttttcgctagt 31766460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 41878791 - 41878726
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| |||||||||||||| ||||| || || ||||||||||  |||||||||  ||||||||||    
T  41878791 gtaaatggactaagccaccaaccatgatagttaaagggaagagtgacaaacttcaccttcaaccac 41878726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 45648334 - 45648391
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtga 207  Q
    |||||||||||||| |||| |||| || ||||||||||||||||| || |||| ||||    
T  45648334 accgttcataatttacatgtgttagcgcaataaaaagagcggaaaaacggacatgtga 45648391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 13149892 - 13149844
Alignment:
Q  176 gtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgct 224  Q
    ||||||| |||||||||||||||  ||||||||||||| | ||||||||    
T  13149892 gtaataataagagcggaaagacaagcacgtgagtgcccatcttttcgct 13149844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 22152459 - 22152531
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccg-ttttttcgct 224  Q
    ||||||||||||||  ||||| |  ||||||||||||||||| || | |||||||||||| | ||||||||||    
T  22152459 gttcataattttcaaacgttaccacaataaaaagagcggaaaaacgggcacgtgagtgccggcttttttcgct 22152531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 23050233 - 23050173
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    ||||||||||||||  || ||||| |||||||||||||| |||||| | || |||||||||    
T  23050233 ttagccaatgcctaggatagtaaatggactaagccaccaaccatgggagtttaagggaaga 23050173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 25842533 - 25842589
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtg 206  Q
    |||||||||||||||||  |||||  ||||||||||||| |||||||| | ||||||    
T  25842533 accgttcataattttcaaccgttagtgtaataaaaagagtggaaagacgggcacgtg 25842589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 49430407 - 49430447
Alignment:
Q  182 aaaagagcggaaagacagacacgtgagtgcccgttttttcg 222  Q
    ||||||||||||| |||||||||| ||||||||| ||||||    
T  49430407 aaaagagcggaaaaacagacacgtaagtgcccgtgttttcg 49430447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 21122420 - 21122498
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||| || |||||| | ||||||||||||||    
T  21122420 caccgttcataattttcaaacgttgacgtaataaaaagagcggaaagacagatacatgagtgtctgttttttcgctagt 21122498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 35519269 - 35519345
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||||||||||||||  |||||||  |||||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  35519269 cgttcataattttcaaacgttaacacaataaaaagagcggaaagacggacatgtgagtgcccgtcttttcgctagtt 35519345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 5190629 - 5190704
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||   |||| || ||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  5190629 cgttcataattttcaaatgttagcgcaataaaaagagcggaaagacagacaggtgagtgcccgtcttttcgctagt 5190704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 52578101 - 52578018
Alignment:
Q  68 tagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| ||||||| ||||| ||||| |||||||||||| ||||| ||||||||||||||||| |||||||||  ||||||||||    
T  52578101 tagcctatgcctagaatggcaaacgcactaagccaccaaccatgataattgaagggaagagatacaaacttcaccttcaaccac 52578018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 19846646 - 19846574
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttc 139  Q
    |||| ||||||| || |||||||||||||||| |||||||||||| |||||||||||||||||| || |||||    
T  19846646 ttagacaatgcccaacatggtaaacggactaatccaccacccatgataattgaagggaagagaagcatacttc 19846574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 37773026 - 37772967
Alignment:
Q  71 ccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaa 130  Q
    |||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  37773026 ccaatgcccaaaatggtgaaaggactaagccaccaaccatggtaattgaagggaagagaa 37772967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 7438124 - 7438047
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||| ||  ||||| ||||||||||| ||||||||||| | |||||||| |||||| |||||||||||    
T  7438124 accgttcataatttacaaacgttagcgtaataaaaatagcggaaagacgggcacgtgagggcccgtcttttcgctagt 7438047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 13608945 - 13608989
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  13608945 atggtaaacggactaagccaccaaccatggtaattgaagggaaga 13608989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 1363924 - 1364007
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtataa 235  Q
    |||||||||||||||   |||| || |||||||||| | ||||| | ||||||||||||||||| ||||||||||||| |||||    
T  1363924 cgttcataattttcaaaggttagcgcaataaaaagaacagaaagtcggacacgtgagtgcccgtcttttcgctagtttatataa 1364007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 20702719 - 20702790
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttc 221  Q
    |||||| ||||||||||  ||||| || |||||||||||||||||||| | ||||||||||||||| |||||    
T  20702719 accgttaataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacgtgagtgcccgtcttttc 20702790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 23775395 - 23775336
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtataatg 237  Q
    |||||||||||||||||||| ||||||||| || |||| ||||||||||| |||||||||    
T  23775395 aataaaaagagcggaaagacggacacgtgaatgtccgtcttttcgctagtatgtataatg 23775336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 17702658 - 17702723
Alignment:
Q  148 ccaccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgccc 213  Q
    |||||||||||||||||||  ||||| || |||||||||||||||||||   ||||||||||||||    
T  17702658 ccaccgttcataattttcaaacgttagcgcaataaaaagagcggaaagatgaacacgtgagtgccc 17702723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 44277142 - 44277093
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  44277142 aataaaaagagcggaaagacatgcacgtgagtgcccgtcttttcgctagt 44277093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 2548616 - 2548676
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagt 209  Q
    ||||||||||||||||||  |||||| | || ||||||||||||||||| |||||||||||    
T  2548616 caccgttcataattttcacacgttaatgcaacaaaaagagcggaaagacggacacgtgagt 2548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 8814114 - 8814058
Alignment:
Q  71 ccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    |||||||||| ||| | |||||||||||||||||| ||||||||||||| |||||||    
T  8814114 ccaatgcctagaatagaaaacggactaagccaccaaccatggtaattgaggggaaga 8814058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 9831480 - 9831417
Alignment:
Q  89 aacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccacc 152  Q
    ||||||||||||||||| ||||| |||||||||||||| | ||| || |||| |||||||||||    
T  9831480 aacggactaagccaccagccatgataattgaagggaagtgtaacgaatttcgccttcaaccacc 9831417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 23091187 - 23091109
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||| ||||||||||||  || ||||| |||||||||||||||||||| | ||| ||| ||| ||| |||||||||||    
T  23091187 caccgctcataattttcaaacggtaacgcaataaaaagagcggaaagacgggcacatgaatgctcgtcttttcgctagt 23091109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 11131187 - 11131252
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||| |||||||||||||| ||||| ||||| ||||||||||  |||||||||  ||||||||||    
T  11131187 gtaaaaggactaagccaccaaccatgataattaaagggaagagtgacaaacttcaccttcaaccac 11131252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 13137198 - 13137113
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccacc 152  Q
    |||||| |||||||  | ||||||||||||||||||||| ||||| |||||||||  ||||| | |||| |||  |||||||||||    
T  13137198 ttagcctatgcctagtaaggtaaacggactaagccaccaaccatgataattgaagaaaagagtagcaaatttcaccttcaaccacc 13137113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 22495352 - 22495401
Alignment:
Q  71 ccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaa 120  Q
    |||||||||| |||||| |||||| |||||||||| ||||||||||||||    
T  22495352 ccaatgcctagaatggtgaacggattaagccaccaaccatggtaattgaa 22495401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 54870818 - 54870871
Alignment:
Q  86 gtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttc 139  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||  |||||||||    
T  54870818 gtaaacggactaagccaccaaccatgataattaaagggaagagttacaaacttc 54870871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 161001 - 161049
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagac 197  Q
    ||||||||||||||||||  | ||| |||||||||||||||||||||||    
T  161001 caccgttcataattttcaaacattagcgtaataaaaagagcggaaagac 161049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 5499199 - 5499279
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagttt 229  Q
    ||||||||||||||||||  |||||  | ||||||||||| ||| |||  | ||| ||||||||||| |||||||||||||    
T  5499199 caccgttcataattttcaaacgttagagcaataaaaagagtggagagatgggcacatgagtgcccgtcttttcgctagttt 5499279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 20818069 - 20817993
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgcta 225  Q
    ||||||||||| |||||||   |||| | |||||||||| ||||||||||  |||||||||||| || |||||||||    
T  20818069 caccgttcatatttttcataaattaatgcaataaaaagaacggaaagacaagcacgtgagtgccagtcttttcgcta 20817993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 225
Target Start/End: Complemental strand, 9779029 - 9778982
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgcta 225  Q
    ||||||||||||||||||||||| |||||| ||| ||| |||||||||    
T  9779029 aataaaaagagcggaaagacagaaacgtgaatgctcgtattttcgcta 9778982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 17702435 - 17702364
Alignment:
Q  157 ataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||||  ||||| || | |||||||||||||||||  | ||| ||||||||||| ||||||||||||    
T  17702435 ataattttcaaacgttagcgcagtaaaaagagcggaaagaggggcacatgagtgcccgtcttttcgctagtt 17702364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 27270012 - 27270071
Alignment:
Q  92 ggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||||||||||||| ||||| |||||||||||||| |||  ||| |||| ||||||||||    
T  27270012 ggactaagccaccaaccatgataattgaagggaagtgaaggaaatttcgccttcaaccac 27270071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 54855970 - 54855891
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||| |||||||| |   ||||||| || |||||||| |||||||| | ||||||| ||||||| ||||||||||||    
T  54855970 caccgttaataatttttaaaagttaacgcaacaaaaagagtggaaagacgggcacgtgaatgcccgtcttttcgctagtt 54855891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 9170922 - 9170972
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||||||||||| || |||||||||||||| || |||||| |||||    
T  9170922 aataaaaagagcggaaaaacggacacgtgagtgcctgtcttttcgttagtt 9170972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 45637548 - 45637490
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaa 125  Q
    |||||||||||||| ||| | |||||| ||||||||||| ||||| ||||||| |||||    
T  45637548 ttagccaatgcctagaatagaaaacgggctaagccaccaaccatgttaattgaggggaa 45637490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 30972364 - 30972453
Alignment:
Q  62 aactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    |||| |||||| ||||| ||||| || ||  ||||||||||||| ||||| || |||||||||||||||  ||| |||| ||||| ||||    
T  30972364 aactattagcctatgccaaaaatagtgaaatgactaagccaccagccatgatagttgaagggaagagaaggaaatttcgccttcagccac 30972453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 49320361 - 49320300
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgc 211  Q
    ||||||| |||||||||  |||||||  |||||||||||| ||||||||| |||| ||||||    
T  49320361 accgttcttaattttcaaacgttaacacaataaaaagagcagaaagacaggcacgcgagtgc 49320300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 5720286 - 5720238
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagac 197  Q
    ||||||||||||||||||  |||||||| ||||||||||| | ||||||    
T  5720286 caccgttcataattttcaaacgttaacgcaataaaaagagtgaaaagac 5720238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 12115097 - 12115053
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    |||||||||||||| |||||| | ||||| |||||||||||||||    
T  12115097 atggtaaacggactgagccacaaaccatgataattgaagggaaga 12115053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 22653389 - 22653321
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||| ||||||||||||| ||||| |||||||||| ||   || |||| |||| ||||||||||    
T  22653389 atggtaaacagactaagccaccaaccatgataattgaaggtaatgtaagcaaatttcgccttcaaccac 22653321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 39670361 - 39670433
Alignment:
Q  155 tcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||  | |||||| ||||||||||||||||| |  | ||||||||| | ||| |||||||||||    
T  39670361 tcataattttcaaacattaacgcaataaaaagagcggaaatatgggcacgtgagtacacgtcttttcgctagt 39670433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 8462510 - 8462578
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||| |||| |||| ||||||||||    
T  8462510 atggtaaacagactaagccaccaaccatgataattgaagggaagagaagcaaatttcgccttcaaccac 8462578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 13469358 - 13469438
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagttt 229  Q
    |||| |||||||||||||  | ||||| ||||||||||||||||||||| | ||||||||||||||| ||||||| |||||    
T  13469358 cacctttcataattttcaaactttaacataataaaaagagcggaaagacgggcacgtgagtgcccgtcttttcgcaagttt 13469438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 27022650 - 27022608
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgtttttt 220  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27022650 aataaaaagagcggaaagacagacacgtgagtgcccgtttttt 27022608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 13150141 - 13150201
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagt 209  Q
    ||||||| ||||||||||  |||||||| |||||||||||||||||||| |||||||||||    
T  13150141 caccgttaataattttcaaacgttaacgcaataaaaagagcggaaagacggacacgtgagt 13150201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 15898963 - 15899039
Alignment:
Q  151 ccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||| ||||||||||  |||||  | || ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  15898963 ccgtttataattttcaaacgttagtgcaacaaaaagagcggaaagacggacacgtgagtgcccgtcttttcgctagt 15899039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 38738543 - 38738483
Alignment:
Q  67 ttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaaga 127  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||| ||||||| |||||||    
T  38738543 ttagccaatgcctaaaatagtaaacgggctaagccaccaaccatgataattgaggggaaga 38738483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 35451116 - 35451037
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||| ||   ||||||||| | ||| ||||||||||||    
T  35451116 caccattcataattttcatacgttaacgcaataaaaagagcggaaaaacgtgcacgtgagtacacgtcttttcgctagtt 35451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 1759519 - 1759441
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||| |||||||||  ||||| || ||||||||||||||| |||| ||||| |||||| |||| |||||||||||    
T  1759519 caccgttcttaattttcaaacgttagcgcaataaaaagagcggagagacggacacttgagtgaccgtcttttcgctagt 1759441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 15044160 - 15044083
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||||  ||||| || ||||||| |||| |||| |||| ||||||||||||||| |||||||||||    
T  15044160 caccgttcataattttcaaacgttagcgcaataaaa-gagcagaaaaacaggcacgtgagtgcccgtcttttcgctagt 15044083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 5918833 - 5918910
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||| ||||||||||  ||||| || ||||||||||||||||||||   |||||||||| |||| |||||||||||    
T  5918833 accgttaataattttcaaacgttagcgcaataaaaagagcggaaagacgagcacgtgagtgtccgtcttttcgctagt 5918910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 11929447 - 11929402
Alignment:
Q  182 aaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||    
T  11929447 aaaagagcggaaagacatacacgtgagtgcccgtcttttcgctagt 11929402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 11352972 - 11353040
Alignment:
Q  169 cgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtataatg 237  Q
    ||||| || |||||||||||||||||||||| |||||||||| |||| ||||| ||||||  |||||||    
T  11352972 cgttagcgcaataaaaagagcggaaagacaggcacgtgagtgtccgtcttttcactagttaatataatg 11353040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 18994617 - 18994542
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgct 224  Q
    ||||||||||||||||||  |||   || |||||||||||||||||||| | |||||||||||| || ||||||||    
T  18994617 caccgttcataattttcaaacgtcggcgcaataaaaagagcggaaagacgggcacgtgagtgccagtcttttcgct 18994542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 33191206 - 33191268
Alignment:
Q  89 aacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||||||||||| ||||| |||||||||||||||| | |||| |||  ||||||||||    
T  33191206 aacggactaagccaccaaccatgataattgaagggaagagtatcaaatttcaacttcaaccac 33191268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 41666621 - 41666543
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||| ||||  | |||| | |||||||||||| ||||||| |||||||||||| | || |||||||||||    
T  41666621 caccgttcataatattcaaacattaaggcaataaaaagagcagaaagacggacacgtgagtgactgtcttttcgctagt 41666543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 12838771 - 12838837
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttt 219  Q
    ||||||||||||||  | |||||| ||||||||||| |||||||| ||||| |||||| || |||||    
T  12838771 gttcataattttcaaacattaacgcaataaaaagagaggaaagacggacacatgagtggcctttttt 12838837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 23085624 - 23085702
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||   |  ||||| |||||||||| ||||||||| |  | |||||||||||| |||||||||||    
T  23085624 caccgttcataattttctaacaataacgcaataaaaagaacggaaagacgggtatgtgagtgcccgtcttttcgctagt 23085702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 27837753 - 27837823
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgc 223  Q
    ||||||||||||||  || || || ||||||||||||||| |||| ||||||||| ||| ||| |||||||    
T  27837753 gttcataattttcaaacgctagcgcaataaaaagagcggagagacggacacgtgaatgctcgtcttttcgc 27837823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 33192389 - 33192331
Alignment:
Q  169 cgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||| || ||||||||||  |||||||||||||||||||||| | | |||||||||||    
T  33192389 cgttagcgcaataaaaagaatggaaagacagacacgtgagtgctcatcttttcgctagt 33192331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 34180246 - 34180324
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||| ||  ||||| ||||| ||||| | ||||| ||| | |||||||||| |||| |||||||||||    
T  34180246 caccgttcataatttacaaacgttagcgtaagaaaaataccggaatgacgggcacgtgagtgtccgtcttttcgctagt 34180324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 38804528 - 38804458
Alignment:
Q  155 tcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgcta 225  Q
    ||||||||||||  ||||| || |||||||||||||||||||| | ||| ||| ||||| | |||||||||    
T  38804528 tcataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacatgaatgcccatcttttcgcta 38804458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 45440852 - 45440930
Alignment:
Q  150 accgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||| ||||||||||||  ||| | || | || ||| ||||||||||||||||| ||||||||||  ||||||||||||    
T  45440852 accgctcataattttcaaacgtcagcgcattagaaatagcggaaagacagacacatgagtgcccgccttttcgctagtt 45440930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 151
Target Start/End: Complemental strand, 5752112 - 5752015
Alignment:
Q  54 agaaaagaaactcttagccaatgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccac 151  Q
    ||||||||||| ||| | | ||||| |||||||| ||||  |||||| |||| ||||| ||||||| |||||||||   | |||||| ||||||||||    
T  5752112 agaaaagaaacacttggtctatgcccaaaatggtgaacgagctaagctaccagccatgataattgaggggaagagaggaatacttcgccttcaaccac 5752015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 7020146 - 7020191
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaa 194  Q
    |||||||| |||||||||  ||||||||||||||||| ||||||||    
T  7020146 caccgttcgtaattttcaaacgttaacgtaataaaaatagcggaaa 7020191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 8889755 - 8889788
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgc 211  Q
    |||||||||||||||||||| |||||||||||||    
T  8889755 aataaaaagagcggaaagacggacacgtgagtgc 8889788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 9503206 - 9503255
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||| |||||||| |||||  |||||||||| |||||||||||    
T  9503206 aataaaaagagaggaaagacggacactcgagtgcccgtcttttcgctagt 9503255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 11916174 - 11916121
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtg 206  Q
    |||||| |||||||  |||||||||||||||||||||| |||||| | ||||||    
T  11916174 gttcatcattttcaaacgttaacgtaataaaaagagcgaaaagacgggcacgtg 11916121  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 11941804 - 11941849
Alignment:
Q  182 aaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||||||||  ||||||| |||||||| |||||||||||    
T  11941804 aaaagagcggaaagacgtacacgtgggtgcccgtcttttcgctagt 11941849  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 33282917 - 33282848
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccacc 152  Q
    ||||||||||||||||||||||| ||||| |||||||  || |||||| |||| ||   |||||||||||    
T  33282917 atggtaaacggactaagccaccaaccatgataattgagagggagagaagcaaatttttccttcaaccacc 33282848  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 43922447 - 43922480
Alignment:
Q  174 acgtaataaaaagagcggaaagacagacacgtga 207  Q
    |||||||||||||||||||||||| |||||||||    
T  43922447 acgtaataaaaagagcggaaagacggacacgtga 43922480  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 15916970 - 15916926
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaaga 196  Q
    |||||||||||||||  ||||| || |||||||||||||||||||    
T  15916970 cgttcataattttcaaacgttagcggaataaaaagagcggaaaga 15916926  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 41941137 - 41941081
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgt 205  Q
    ||||||||||||||||||  ||| | ||||||||||||| | ||||||| |||||||    
T  41941137 caccgttcataattttcaaacgtcagcgtaataaaaagaacagaaagacggacacgt 41941081  T

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Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 21157 - 21074
Alignment:
Q  157 ataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtttgtataatggaa 240  Q
    ||||||||||   ||||||  |||||||||||||||||||| | || |||||||||||| |||||||||||| | |||||||||    
T  21157 ataattttcaaatgttaacacaataaaaagagcggaaagacgggcatgtgagtgcccgtcttttcgctagttggaataatggaa 21074  T

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Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 21649 - 21698
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||||| | |||||||||| | || |||||||||||    
T  21649 aataaaaagagcggaaagacggtcacgtgagtgtctgtcttttcgctagt 21698  T

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Target: scaffold0293 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 4682 - 4755
Alignment:
Q  154 ttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    ||||||||||| |  | ||| ||||||||||||||||||||||| |||||||||||||| || ||| |||||||    
T  4682 ttcataattttgaaacattatcgtaataaaaagagcggaaagacggacacgtgagtgcctgtctttgcgctagt 4755  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 227484 - 227533
Alignment:
Q  178 aataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  227484 aataaaaagagcggaaagacggacacgtgagtgctcgtcttttcgctagt 227533  T

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Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 226217 - 226142
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||| | || | |||| |||||||||||||||||| |||  || |||||||||| |||||||||||||||    
T  226217 cgttcataatctacacgtgttagcgtaataaaaagagcggagagatggaaacgtgagtgctcgttttttcgctagt 226142  T

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Target: scaffold0268 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 21407 - 21482
Alignment:
Q  153 gttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    ||||||||||||||  | ||| || |||||||||||||||||||| |||||| |||||||| | |||| |||||||    
T  21407 gttcataattttcaaactttagcgcaataaaaagagcggaaagacggacacgcgagtgcccatctttttgctagtt 21482  T

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Target: scaffold0068 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 57490 - 57415
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||  ||||| || |||||||| ||| ||||||| | ||||||||||||||| ||||| |||||    
T  57490 cgttcataattttcaaacgttagcgcaataaaaatagcagaaagacgggcacgtgagtgcccgtattttctctagt 57415  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 254695 - 254766
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgtttttt 220  Q
    ||||||||||||| ||||  |||||  | ||||||||||| ||||||||||||||||||||| |||| ||||    
T  254695 caccgttcataatcttcaaacgttagtgcaataaaaagagtggaaagacagacacgtgagtgtccgtctttt 254766  T

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Target: scaffold0707 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 244 - 169
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagt 227  Q
    |||||||||||||||  ||||| || || |||||||||| |||||| |  || ||||||||||| |||||||||||    
T  244 cgttcataattttcaaacgttagcgcaaaaaaaagagcgaaaagacgggtacttgagtgcccgtcttttcgctagt 169  T

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Target: scaffold0649 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 8302 - 8251
Alignment:
Q  152 cgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacac 203  Q
    ||||||||||||| |  ||||| ||||||||||||||||||||||| |||||    
T  8302 cgttcataatttttaaacgttagcgtaataaaaagagcggaaagacggacac 8251  T

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Target: scaffold0196 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 8582 - 8503
Alignment:
Q  149 caccgttcataattttcatgcgttaacgtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgctagtt 228  Q
    |||| ||||||||||||   ||| |||| ||||||||||||||| |||||| |||||  ||||| || ||||||||||||    
T  8582 cacctttcataattttcgaacgtcaacgcaataaaaagagcggatagacaggcacgtatgtgcctgtcttttcgctagtt 8503  T

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Target: scaffold0795 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 152
Target Start/End: Complemental strand, 2260 - 2191
Alignment:
Q  83 atggtaaacggactaagccaccacccatggtaattgaagggaagagaaacaaacttcgtcttcaaccacc 152  Q
    |||||||| ||||| |||||||| ||||| ||||||||||| |||||| | | ||||  |||||||||||    
T  2260 atggtaaatggactgagccaccaaccatgataattgaaggggagagaagcgagcttcaccttcaaccacc 2191  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 64275 - 64331
Alignment:
Q  74 atgcctaaaatggtaaacggactaagccaccacccatggtaattgaagggaagagaa 130  Q
    ||||| |||||||| || ||||||||||||||  |||| |||||||||| |||||||    
T  64275 atgcccaaaatggtgaaaggactaagccaccaagcatgataattgaaggaaagagaa 64331  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 155110 - 155158
Alignment:
Q  176 gtaataaaaagagcggaaagacagacacgtgagtgcccgttttttcgct 224  Q
    ||||||| |||||||||||||||  ||||||||||||| | ||||||||    
T  155110 gtaataataagagcggaaagacaagcacgtgagtgcccatcttttcgct 155158  T

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